Psyllid ID: psy13313

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50
Protein Sequence
MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLLKK
Secondary Structure (PSIPRED)
cccccccccEEEEccEEEEccEEEEEEEccccccHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEccccccccEEEEEEEcccccHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mmkdckhhnIIAYYGSYLRKDKLWICMeycgggslqdiyhtykifpllkk
Flexible Loop (DISEMBL)
MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLLKK
Low Complexity Region (SEG)
MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLLKK
Disordered region (IsUnstruct)
****CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL**
Disordered Region (DISOPRED)
*****KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY********
Disordered Region (DISEMBL)
MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLLKK
Disordered Region (DISPRO)
**KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLLKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	50	2.2.26 [Sep-21-2011]
Q924I2	873	Mitogen-activated protein	yes	N/A	0.8	0.045	0.875	2e-18
Q99JP0	894	Mitogen-activated protein	yes	N/A	0.8	0.044	0.875	2e-18
Q8IVH8	894	Mitogen-activated protein	yes	N/A	0.8	0.044	0.875	2e-18
Q8BPM2	847	Mitogen-activated protein	no	N/A	0.8	0.047	0.8	3e-16
Q9Y4K4	846	Mitogen-activated protein	no	N/A	0.8	0.047	0.8	3e-16
Q61161	821	Mitogen-activated protein	no	N/A	0.8	0.048	0.675	2e-14
Q12851	820	Mitogen-activated protein	no	N/A	0.8	0.048	0.675	2e-14
P70218	827	Mitogen-activated protein	no	N/A	0.8	0.048	0.7	9e-13
Q92918	833	Mitogen-activated protein	no	N/A	0.8	0.048	0.675	3e-12
A4K2W5	487	Serine/threonine-protein	N/A	N/A	0.76	0.078	0.526	3e-08

>sp|Q924I2|M4K3_RAT Mitogen-activated protein kinase kinase kinase kinase 3 OS=Rattus norvegicus GN=Map4k3 PE=1 SV=2

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct: 64  MMKDCKHANIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q99JP0|M4K3_MOUSE Mitogen-activated protein kinase kinase kinase kinase 3 OS=Mus musculus GN=Map4k3 PE=1 SV=4

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct: 64  MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8IVH8|M4K3_HUMAN Mitogen-activated protein kinase kinase kinase kinase 3 OS=Homo sapiens GN=MAP4K3 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct: 64  MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BPM2|M4K5_MOUSE Mitogen-activated protein kinase kinase kinase kinase 5 OS=Mus musculus GN=Map4k5 PE=2 SV=2

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/40 (80%), Positives = 38/40 (95%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           M+K+CKH NI+AY+GSYL ++KLWICMEYCGGGSLQDIYH
Sbjct: 68  MVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYH 107

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Y4K4|M4K5_HUMAN Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo sapiens GN=MAP4K5 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/40 (80%), Positives = 38/40 (95%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           M+K+CKH NI+AY+GSYL ++KLWICMEYCGGGSLQDIYH
Sbjct: 68  MVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYH 107

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61161|M4K2_MOUSE Mitogen-activated protein kinase kinase kinase kinase 2 OS=Mus musculus GN=Map4k2 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 37/40 (92%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           ++++C+H N++AY GSYLR D+LWICME+CGGGSLQ+IYH
Sbjct: 64  ILRECRHPNVVAYIGSYLRNDRLWICMEFCGGGSLQEIYH 103

Serine/threonine-protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Acts as a MAPK kinase kinase kinase (MAP4K) and is an upstream activator of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway and to a lesser extend of the p38 MAPKs signaling pathway. Required for the efficient activation of JNKs by TRAF6-dependent stimuli, including pathogen-associated molecular patterns (PAMPs) such as polyinosine-polycytidine (poly(IC)), lipopolysaccharides (LPS), lipid A, peptidoglycan (PGN),or bacterial flagellin. To a lesser degree, IL-1 and engagement of CD40 also stimulate MAP4K2-mediated JNKs activation. The requirement for MAP4K2/GCK is most pronounced for LPS signaling, and extends to LPS stimulation of c-Jun phosphorylation and induction of IL-8. Enhances MAP3K1 oligomerization, which may relieve N-terminal mediated MAP3K1 autoinhibition and lead to activation following autophosphorylation. Mediates also the SAP/JNK signaling pathway and the p38 MAPKs signaling pathway through activation of the MAP3Ks MAP3K10/MLK2 and MAP3K11/MLK3. May play a role in the regulation of vesicle targeting or fusion. regulation of vesicle targeting or fusion.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q12851|M4K2_HUMAN Mitogen-activated protein kinase kinase kinase kinase 2 OS=Homo sapiens GN=MAP4K2 PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 37/40 (92%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           ++++C+H N++AY GSYLR D+LWICME+CGGGSLQ+IYH
Sbjct: 64  ILRECRHPNVVAYIGSYLRNDRLWICMEFCGGGSLQEIYH 103

Serine/threonine-protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Acts as a MAPK kinase kinase kinase (MAP4K) and is an upstream activator of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway and to a lesser extend of the p38 MAPKs signaling pathway. Required for the efficient activation of JNKs by TRAF6-dependent stimuli, including pathogen-associated molecular patterns (PAMPs) such as polyinosine-polycytidine (poly(IC)), lipopolysaccharides (LPS), lipid A, peptidoglycan (PGN), or bacterial flagellin. To a lesser degree, IL-1 and engagement of CD40 also stimulate MAP4K2-mediated JNKs activation. The requirement for MAP4K2/GCK is most pronounced for LPS signaling, and extends to LPS stimulation of c-Jun phosphorylation and induction of IL-8. Enhances MAP3K1 oligomerization, which may relieve N-terminal mediated MAP3K1 autoinhibition and lead to activation following autophosphorylation. Mediates also the SAP/JNK signaling pathway and the p38 MAPKs signaling pathway through activation of the MAP3Ks MAP3K10/MLK2 and MAP3K11/MLK3. May play a role in the regulation of vesicle targeting or fusion. regulation of vesicle targeting or fusion.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P70218|M4K1_MOUSE Mitogen-activated protein kinase kinase kinase kinase 1 OS=Mus musculus GN=Map4k1 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/40 (70%), Positives = 33/40 (82%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           M+K C+H NI+AY+GSYL   KLWICME+CG GSLQDIY 
Sbjct: 65  MLKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYQ 104

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. May play a role in hematopoietic lineage decisions and growth regulation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 OS=Homo sapiens GN=MAP4K1 PE=1 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           ++K C+H NI+AY+GSYL   KLWICME+CG GSLQDIY 
Sbjct: 65  ILKTCRHANIVAYHGSYLWLQKLWICMEFCGAGSLQDIYQ 104

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. May play a role in hematopoietic lineage decisions and growth regulation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A4K2W5|STK4_AOTNA Serine/threonine-protein kinase 4 OS=Aotus nancymaae GN=STK4 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+ C  H+++ YYGSY +   LWI MEYCG GS+ DI
Sbjct: 76  IMQQCDSHHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 113

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Aotus nancymaae (taxid: 37293)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	50
332025920	897	Mitogen-activated protein kinase kinase	0.8	0.044	0.925	1e-17
322792326	884	hypothetical protein SINV_06196 [Solenop	0.8	0.045	0.925	2e-17
307191886	882	Mitogen-activated protein kinase kinase	0.8	0.045	0.925	2e-17
307171171	897	Mitogen-activated protein kinase kinase	0.8	0.044	0.925	2e-17
340717284	896	PREDICTED: mitogen-activated protein kin	0.8	0.044	0.925	2e-17
380030704	900	PREDICTED: mitogen-activated protein kin	0.8	0.044	0.925	2e-17
328777736	900	PREDICTED: mitogen-activated protein kin	0.8	0.044	0.925	2e-17
383856074	896	PREDICTED: mitogen-activated protein kin	0.8	0.044	0.925	2e-17
340717282	901	PREDICTED: mitogen-activated protein kin	0.8	0.044	0.925	2e-17
350407772	900	PREDICTED: mitogen-activated protein kin	0.8	0.044	0.925	2e-17

>gi|332025920|gb|EGI66076.1| Mitogen-activated protein kinase kinase kinase kinase 5 [Acromyrmex echinatior]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 70  MMKDCRHSNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 109

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792326|gb|EFZ16310.1| hypothetical protein SINV_06196 [Solenopsis invicta]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 70  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 109

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191886|gb|EFN75305.1| Mitogen-activated protein kinase kinase kinase kinase 5 [Harpegnathos saltator]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 69  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 108

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171171|gb|EFN63158.1| Mitogen-activated protein kinase kinase kinase kinase 3 [Camponotus floridanus]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 70  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 109

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717284|ref|XP_003397115.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 2 [Bombus terrestris]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 69  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 108

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030704|ref|XP_003698983.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like [Apis florea]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 69  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 108

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777736|ref|XP_396779.3| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5 [Apis mellifera]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 69  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 108

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856074|ref|XP_003703535.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 2 [Megachile rotundata]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 70  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 109

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717282|ref|XP_003397114.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5-like isoform 1 [Bombus terrestris]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 69  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 108

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407772|ref|XP_003488189.1| PREDICTED: mitogen-activated protein kinase kinase kinase kinase 3-like [Bombus impatiens]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           MMKDC+H NIIAYYGSYLR+DKLWICMEYCGGGSLQDIYH
Sbjct: 69  MMKDCRHPNIIAYYGSYLRRDKLWICMEYCGGGSLQDIYH 108

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	50
UNIPROTKB|F8WAZ1	131	MAP4K3 "Mitogen-activated prot	0.8	0.305	0.875	2e-17
UNIPROTKB|F1S4T3	492	LOC100520016 "Uncharacterized	0.8	0.081	0.875	1.2e-16
UNIPROTKB|F5H5A3	810	MAP4K3 "Mitogen-activated prot	0.8	0.049	0.875	3.1e-16
UNIPROTKB|F1NLQ4	869	MAP4K3 "Mitogen-activated prot	0.8	0.046	0.875	3.4e-16
UNIPROTKB|J9P806	873	MAP4K3 "Mitogen-activated prot	0.8	0.045	0.875	3.5e-16
RGD|621280	873	Map4k3 "mitogen-activated prot	0.8	0.045	0.875	3.5e-16
UNIPROTKB|Q924I2	873	Map4k3 "Mitogen-activated prot	0.8	0.045	0.875	3.5e-16
UNIPROTKB|E1BJH5	894	MAP4K3 "Mitogen-activated prot	0.8	0.044	0.875	3.6e-16
UNIPROTKB|F1PZN1	894	MAP4K3 "Mitogen-activated prot	0.8	0.044	0.875	3.6e-16
UNIPROTKB|Q8IVH8	894	MAP4K3 "Mitogen-activated prot	0.8	0.044	0.875	3.6e-16

UNIPROTKB|F8WAZ1 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase 3" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1S4T3 LOC100520016 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 213 (80.0 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    13 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 52

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F5H5A3 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 3.1e-16, P = 3.1e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:     1 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 40

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NLQ4 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Gallus gallus (taxid:9031)]

 Score = 213 (80.0 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    60 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 99

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

UNIPROTKB|J9P806 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Canis lupus familiaris (taxid:9615)]

 Score = 213 (80.0 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

RGD|621280 Map4k3 "mitogen-activated protein kinase kinase kinase kinase 3" [Rattus norvegicus (taxid:10116)]

 Score = 213 (80.0 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHANIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO;ISS

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISO;ISS

GO:0006468 "protein phosphorylation" evidence=ISO;ISS

GO:0006950 "response to stress" evidence=ISO;ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;ISS

UNIPROTKB|Q924I2 Map4k3 "Mitogen-activated protein kinase kinase kinase kinase 3" [Rattus norvegicus (taxid:10116)]

 Score = 213 (80.0 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHANIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0005083 "small GTPase regulator activity" evidence=IEA

UNIPROTKB|E1BJH5 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Bos taurus (taxid:9913)]

 Score = 213 (80.0 bits), Expect = 3.6e-16, P = 3.6e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

UNIPROTKB|F1PZN1 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase" [Canis lupus familiaris (taxid:9615)]

 Score = 213 (80.0 bits), Expect = 3.6e-16, P = 3.6e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005083 "small GTPase regulator activity" evidence=IEA

UNIPROTKB|Q8IVH8 MAP4K3 "Mitogen-activated protein kinase kinase kinase kinase 3" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 3.6e-16, P = 3.6e-16
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query:     1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
             MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct:    64 MMKDCKHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 103

GO:0005083 "small GTPase regulator activity" evidence=IEA

GO:0006950 "response to stress" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0004672 "protein kinase activity" evidence=TAS

GO:0007254 "JNK cascade" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6C3D7	STE20_YARLI	2, ., 7, ., 1, 1, ., 1	0.5263	0.76	0.0337	yes	N/A
Q99JP0	M4K3_MOUSE	2, ., 7, ., 1, 1, ., 1	0.875	0.8	0.0447	yes	N/A
Q8IVH8	M4K3_HUMAN	2, ., 7, ., 1, 1, ., 1	0.875	0.8	0.0447	yes	N/A
Q924I2	M4K3_RAT	2, ., 7, ., 1, 1, ., 1	0.875	0.8	0.0458	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	50
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-25
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-24
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-22
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-18
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-15
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-11
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-11
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-10
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-10
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-10
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-10
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	6e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	6e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-09
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-09
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	7e-09
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	9e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-08
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-08
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-08
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-08
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-08
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-08
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-07
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	5e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	7e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	7e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	8e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	8e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	7e-05
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-04
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.001
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	0.001
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.001
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.002
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.002
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.003
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.003
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.004
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.004

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 92.7 bits (231), Expect = 2e-25
 Identities = 31/40 (77%), Positives = 37/40 (92%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
          M+K+C+H NI+AY+GSYLR+DKLWI MEYCGGGSLQDIY 
Sbjct: 53 MLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQ 92

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 89.7 bits (222), Expect = 3e-24
 Identities = 35/40 (87%), Positives = 39/40 (97%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
          MMKDCKH NI+AY+GSYLR+DKLWICME+CGGGSLQDIYH
Sbjct: 59 MMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYH 98

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 85.1 bits (210), Expect = 2e-22
 Identities = 32/40 (80%), Positives = 38/40 (95%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
          M+K+CKH NI+AY+GSYL ++KLWICMEYCGGGSLQDIYH
Sbjct: 59 MVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYH 98

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 73.4 bits (181), Expect = 4e-18
 Identities = 25/43 (58%), Positives = 34/43 (79%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
          ++K CKH NI+ YYGSYL+KD+LWI ME+C GGSL+D+  +  
Sbjct: 50 ILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN 92

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 66.5 bits (163), Expect = 2e-15
 Identities = 20/38 (52%), Positives = 25/38 (65%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++K C    I+ YYGSY +   LWI MEYCG GS+ DI
Sbjct: 51 ILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDI 88

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 60.7 bits (148), Expect = 2e-13
 Identities = 25/38 (65%), Positives = 29/38 (76%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +MKDCKH NI+ YY SYL  D+LW+ MEY  GGSL DI
Sbjct: 68  IMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDI 105

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 56.0 bits (136), Expect = 1e-11
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
          ++K  KH NI+  Y  +  +DKL++ MEYC GG L D+        
Sbjct: 50 ILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLS 95

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 55.1 bits (133), Expect = 3e-11
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H NI+  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 69  IMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDI 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 21/44 (47%), Positives = 27/44 (61%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI 44
           +  C+   I  YYGS+L+  KLWI MEYCGGGS  D+    K+
Sbjct: 52 FLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKL 95

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 52.7 bits (127), Expect = 2e-10
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           M  C H N++ YY S++  D+LW+ M Y  GGSL DI
Sbjct: 52 AMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDI 89

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 2e-10
 Identities = 19/45 (42%), Positives = 26/45 (57%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
          +K+ KH NI+ Y GS    D L+I +EY   GSL+ I   +  FP
Sbjct: 53 LKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFP 97

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 51.9 bits (125), Expect = 4e-10
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 5  CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY 39
          C    I+ +YG++     + ICMEY  GGSL  I 
Sbjct: 56 CNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKIL 90

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 52.0 bits (125), Expect = 4e-10
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 2  MKDCKHHNIIAYYGSYLRKDK--LWICMEYCGGGSLQDIY 39
           K CK   I+ YYG++L +    + I MEYC GGSL  IY
Sbjct: 53 NKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIY 92

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 51.4 bits (123), Expect = 6e-10
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ KH NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 69  VMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 6e-10
 Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 7/45 (15%)

Query: 1  MMKD-CKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDI 38
          +++    H NI  +YG++++K      D+LW+ ME CGGGS+ D+
Sbjct: 55 ILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDL 99

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 6e-10
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 5  CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          CKH NI+  Y +Y  ++KLWI +E+C GG+L  I
Sbjct: 59 CKHPNIVGLYEAYFYENKLWILIEFCDGGALDSI 92

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 51.1 bits (123), Expect = 6e-10
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
          +++   H NI+    ++  KD L++ MEYC GG L D         
Sbjct: 51 ILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLS 96

Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 19/42 (45%), Positives = 21/42 (50%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
          +K   H NII YY S+  K KL I MEY  GG L       K
Sbjct: 53 LKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQK 94

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWIC--MEYCGGGSLQDIYHTYKIFP 46
          ++   +H NI+ YYGS   ++K  +   +EY  GGSL  +   +   P
Sbjct: 52 ILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLP 99

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 49.3 bits (117), Expect = 4e-09
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY-HT 41
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI  HT
Sbjct: 70  IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 111

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 48.5 bits (115), Expect = 7e-09
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI-----YHTYKIFPLLKK 50
           ++  C    +  YYGSYL+  KLWI MEY GGGS  D+     +  ++I  +LK+
Sbjct: 55  VLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE 109

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 48.1 bits (114), Expect = 9e-09
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 7/50 (14%)

Query: 1   MMKDCKHH-NIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHTYK 43
           M+K   HH NI  YYG++++K      D+LW+ ME+CG GS+ D+    K
Sbjct: 65  MLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK 114

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 69  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 47.7 bits (113), Expect = 1e-08
 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY-HT 41
           +M+D  H N++  Y SYL  D+LW+ ME+  GG+L DI  HT
Sbjct: 72  IMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT 113

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
          ++K   H NI+  YG +  ++ L++ MEYC GGSL+D+    +
Sbjct: 44 ILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENE 86

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 47.3 bits (112), Expect = 2e-08
 Identities = 17/38 (44%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  ++LW+ ME+  GG+L DI
Sbjct: 71  IMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDI 108

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 47.0 bits (111), Expect = 2e-08
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 7/50 (14%)

Query: 1   MMKDCKHH-NIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHTYK 43
           M+K   HH NI  YYG++++K      D+LW+ ME+CG GS+ D+    K
Sbjct: 55  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 104

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 47.0 bits (111), Expect = 3e-08
 Identities = 20/38 (52%), Positives = 24/38 (63%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++  C    I  YYGSYL+  KLWI MEY GGGS  D+
Sbjct: 55 VLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDL 92

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 46.6 bits (110), Expect = 3e-08
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++  C    +  YYGSYL+  KLWI MEY GGGS  D+
Sbjct: 55 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL 92

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 3e-08
 Identities = 17/27 (62%), Positives = 20/27 (74%)

Query: 9  NIIAYYGSYLRKDKLWICMEYCGGGSL 35
          NI  YYGSYL+  +LWI MEY  GGS+
Sbjct: 63 NITKYYGSYLKGPRLWIIMEYAEGGSV 89

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 45.1 bits (107), Expect = 1e-07
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++   +H NI+ Y G+   +D L+I +E   GGSL  +   Y  FP
Sbjct: 55  LLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFP 100

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 16/42 (38%), Positives = 28/42 (66%)

Query: 6  KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
          KH N++ YYG  + ++K++I MEYC GG+L+++    +I   
Sbjct: 57 KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDE 98

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +MK   H NI+   G   + + L+I  EY  GG L D
Sbjct: 54 IMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLD 90

Length = 258

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 44.0 bits (104), Expect = 3e-07
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 7  HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          H NIIAYY  ++  + L I MEY  GG+L D 
Sbjct: 58 HPNIIAYYNHFMDDNTLLIEMEYANGGTLYDK 89

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 43.9 bits (103), Expect = 3e-07
 Identities = 17/38 (44%), Positives = 27/38 (71%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +MK+ K+ NI+ +  S+L  D+L++ MEY  GGSL D+
Sbjct: 69  VMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +MK   H N++   G    ++ L++ +EY  GG L D
Sbjct: 49 VMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLD 85

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 41.3 bits (97), Expect = 2e-06
 Identities = 17/47 (36%), Positives = 22/47 (46%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
          ++       II YY S+L K KL I MEY   G L  +    +  PL
Sbjct: 52 VLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPL 98

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 40.9 bits (96), Expect = 3e-06
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  +H N I Y G YLR+   W+ MEYC  GS  DI   +K
Sbjct: 69  LQQLRHPNTIEYKGCYLREHTAWLVMEYC-LGSASDILEVHK 109

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 40.9 bits (95), Expect = 3e-06
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 1   MMKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSL-QDIYHTYKIF 45
           +M++ KH NI+ Y   +L K   KL+I ME+C  G L ++I   YK+F
Sbjct: 65  VMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMF 112

Length = 1021

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 40.4 bits (94), Expect = 5e-06
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 5/37 (13%)

Query: 7   HHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDI 38
           H N++ +YG Y +KD     +LW+ +E C GGS+ D+
Sbjct: 74  HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDL 110

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 39.9 bits (94), Expect = 7e-06
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 4  DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           C+   ++  YG++ ++ ++ I +EY  GGSL D+       P
Sbjct: 55 SCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIP 97

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 40.2 bits (94), Expect = 7e-06
 Identities = 14/42 (33%), Positives = 27/42 (64%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY 42
          +M +C+   I+++YG++L ++ + +CME+   GSL  IY   
Sbjct: 56 IMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG 97

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 39.9 bits (93), Expect = 8e-06
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSL 35
          ++   KH NI+ ++ S+    +L+I MEYC GG L
Sbjct: 52 LLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDL 86

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 39.8 bits (93), Expect = 8e-06
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++K+ +H NI+ Y GS L  D L I +EY  GGS+  + + Y  F 
Sbjct: 59  LLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFE 104

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +M+   H N++   G    ++ L+I MEY  GG L  
Sbjct: 54 IMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLS 90

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +M+   H NI+   G    ++ L I MEY  GG L D
Sbjct: 54 IMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLD 90

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 38.1 bits (88), Expect = 3e-05
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++  C H  I+   G++    KLWI +E+C GG++  I
Sbjct: 62 ILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAI 99

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 38.1 bits (88), Expect = 3e-05
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  KH N I Y G YLR+   W+ MEYC  GS  D+   +K
Sbjct: 79  LQRIKHPNSIEYKGCYLREHTAWLVMEYC-LGSASDLLEVHK 119

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 38.1 bits (88), Expect = 4e-05
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  +H N I Y G YLR+   W+ MEYC  GS  D+   +K
Sbjct: 69  LQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK 109

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 37.6 bits (87), Expect = 5e-05
 Identities = 16/46 (34%), Positives = 26/46 (56%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++K  KH NI+ Y G+ L  + + I ME+  GGS+  I + +   P
Sbjct: 55  LLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLP 100

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 37.7 bits (87), Expect = 5e-05
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  KH N I Y G YL++   W+ MEYC  GS  D+   +K
Sbjct: 75  LQQLKHPNTIEYKGCYLKEHTAWLVMEYC-LGSASDLLEVHK 115

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.6 bits (88), Expect = 5e-05
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 2  MKDCKHHNIIAYYGSYLRKDK--LWICMEYCGGGSLQDI 38
          +++ KH NI+ YY   + +    L+I MEYC GG L  +
Sbjct: 53 LRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQL 91

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 37.5 bits (87), Expect = 6e-05
 Identities = 17/45 (37%), Positives = 23/45 (51%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIF 45
            +KD  H NI+ Y G    ++ L I +EY  GGS+     TY  F
Sbjct: 61  TLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRF 105

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 37.1 bits (86), Expect = 7e-05
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          ++K   H NII YY ++L    L I MEY  GG+L +
Sbjct: 52 VLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAE 88

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY 42
          ++K+ +H  I+ YYG     + L I MEY  GGS++D    Y
Sbjct: 57 LLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY 98

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 4  DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSL 35
          +C    I+ +YG++    ++ ICME+  GGSL
Sbjct: 55 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 86

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++ +C    I+ +YG++    ++ ICME+  GGSL  +    K  P
Sbjct: 56  VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP 101

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 35.4 bits (81), Expect = 3e-04
 Identities = 11/38 (28%), Positives = 23/38 (60%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++  C H NI+    ++  ++ LWI +E+C GG++  +
Sbjct: 55 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 92

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 34.8 bits (80), Expect = 5e-04
 Identities = 13/38 (34%), Positives = 24/38 (63%)

Query: 6   KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           +H NI+ YY ++L  D+L+I M+   G  L + +++ K
Sbjct: 67  RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLK 104

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 34.8 bits (80), Expect = 5e-04
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 10 IIAYYGSYLRKDKLWICMEYCGGGSLQDIY 39
          I+ +YG++  +  +++CMEY   GSL  +Y
Sbjct: 61 IVDFYGAFFIEGAVYMCMEYMDAGSLDKLY 90

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 33.8 bits (77), Expect = 0.001
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 5/37 (13%)

Query: 7   HHNIIAYYGSYLRKDK-----LWICMEYCGGGSLQDI 38
           H N++ +YG + + DK     LW+ +E C GGS+ ++
Sbjct: 78  HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTEL 114

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 6  KHHNIIAYYGSYLRKDKLWICMEYCGGGSL 35
          KH NI+ Y  S+     L+I M+YC GG L
Sbjct: 57 KHPNIVQYQESFEENGNLYIVMDYCEGGDL 86

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 33.8 bits (77), Expect = 0.001
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSL 35
          ++   KH NI+A+  S+     L+I MEYC GG L
Sbjct: 51 LLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDL 85

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 33.9 bits (77), Expect = 0.001
 Identities = 12/38 (31%), Positives = 23/38 (60%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++ +C    I+ +YG++    ++ ICME+  GGSL  +
Sbjct: 56 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 93

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 33.3 bits (76), Expect = 0.002
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 5  CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY 39
          C    II +YG++  ++++ IC E+  GGSL D+Y
Sbjct: 56 CDSPYIIGFYGAFFVENRISICTEFMDGGSL-DVY 89

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSL 35
          ++    H NII+Y  ++L  +KL I MEY   G L
Sbjct: 52 ILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDL 86

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 32.7 bits (74), Expect = 0.003
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 5   CKHHNIIAYYGSYLRKDKLWICMEYCGGGSL 35
           C H  I+ ++  +   DKL + MEY  GG L
Sbjct: 122 CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDL 152

Length = 478

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 32.8 bits (73), Expect = 0.003
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 1  MMKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL 48
          ++    H  NI+  Y  +  +  L++ MEY  GGSL+D+         L
Sbjct: 50 ILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPL 98

Length = 384

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 32.5 bits (74), Expect = 0.004
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 6  KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT 41
          KH NI+ Y GS        I ME   GGSL  +  +
Sbjct: 63 KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRS 98

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 32.3 bits (73), Expect = 0.004
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)

Query: 1   MMKDCKHHNIIAYYGSYLR---KDKLWICMEYCGGGSLQDIYHTY 42
           ++K+ +H  I+ YYG  LR   +  L I MEY  GGS++D    Y
Sbjct: 57  LLKNLQHERIVQYYGC-LRDRAEKTLTIFMEYMPGGSVKDQLKAY 100

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	50
KOG0595|consensus	429		99.58
KOG0615|consensus	475		99.32
KOG0598|consensus	357		99.29
KOG0611|consensus	668		99.25
KOG0610|consensus	459		99.23
KOG0575|consensus	592		99.23
KOG0194|consensus	474		99.22
KOG0616|consensus	355		99.19
KOG0605|consensus	550		99.18
KOG0588|consensus	786		99.17
KOG0192|consensus	362		99.14
KOG0197|consensus	468		99.09
KOG1187|consensus	361		99.09
KOG0583|consensus	370		99.09
KOG0586|consensus	596		99.07
KOG0581|consensus	364		99.03
KOG0592|consensus	604		98.98
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.95
KOG1026|consensus	774		98.95
KOG0580|consensus	281		98.95
KOG0582|consensus	516		98.92
KOG0608|consensus	1034		98.92
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.91
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.91
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.91
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.91
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.91
KOG0597|consensus	808		98.9
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.9
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.89
PHA02988	283	hypothetical protein; Provisional	98.89
KOG4721|consensus	904		98.89
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.88
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.87
KOG0589|consensus	426		98.87
KOG0198|consensus	313		98.86
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.85
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.85
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.84
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.84
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.84
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.82
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.82
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.8
PTZ00267	478	NIMA-related protein kinase; Provisional	98.8
KOG0032|consensus	382		98.8
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.79
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.77
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.77
KOG1095|consensus	1025		98.76
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.76
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.76
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.76
KOG0584|consensus	632		98.75
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.75
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.73
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.72
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.72
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.7
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.7
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.7
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.7
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.69
KOG4278|consensus	1157		98.69
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.68
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.68
KOG0694|consensus	694		98.67
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.67
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.66
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.66
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.65
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.65
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.65
KOG1094|consensus	807		98.64
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.64
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.64
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.63
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.63
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.63
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.63
KOG0576|consensus	829		98.62
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.61
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.61
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.61
KOG0574|consensus	502		98.6
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	98.6
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.6
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.6
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.6
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.6
KOG0591|consensus	375		98.59
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.58
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.58
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.58
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.58
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.58
KOG0690|consensus	516		98.58
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.57
KOG0612|consensus	1317		98.57
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.57
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.57
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.57
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.56
KOG0196|consensus	996		98.56
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.56
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.55
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.55
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.55
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.55
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.55
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.54
KOG0599|consensus	411		98.54
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.54
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.52
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.52
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.51
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.51
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.51
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.51
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.5
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.5
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.49
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.49
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.49
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.48
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.48
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.48
KOG4257|consensus	974		98.47
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.46
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.46
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.45
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.45
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.45
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.45
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.44
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.44
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.44
KOG0578|consensus	550		98.44
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.44
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.44
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.44
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.43
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.43
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.43
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.43
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.43
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.43
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.43
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.43
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.43
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.42
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.42
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.42
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.41
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.41
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.41
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.41
KOG0695|consensus	593		98.41
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.41
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.41
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.4
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.4
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.4
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.4
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.4
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.39
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.39
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.39
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.38
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.38
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.38
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.38
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.37
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.37
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.37
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.37
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.37
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.36
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.36
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.36
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.35
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.35
KOG0607|consensus	463		98.35
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.35
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.35
KOG0033|consensus	355		98.34
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.34
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.33
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.33
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.33
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.33
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.33
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.32
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.32
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.32
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.32
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.32
KOG4717|consensus	864		98.32
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.31
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.31
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.31
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.31
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.31
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.3
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.3
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.3
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.29
KOG0600|consensus	560		98.29
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.29
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.28
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.27
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.27
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.27
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.26
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.24
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.24
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.24
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.24
KOG0696|consensus	683		98.24
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.24
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.24
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.23
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.23
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.23
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.23
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.22
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.22
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.22
PHA03212	391	serine/threonine kinase US3; Provisional	98.22
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.22
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.21
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.21
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.2
KOG4250|consensus	732		98.2
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.19
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.19
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.19
KOG0587|consensus	953		98.19
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.19
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.18
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.18
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.18
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.17
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.17
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.17
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.16
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.16
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.16
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.16
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.14
KOG0201|consensus	467		98.14
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.13
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.13
KOG4279|consensus	1226		98.13
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.12
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.11
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.11
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.1
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.1
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.09
KOG4645|consensus	1509		98.09
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.09
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.09
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.08
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.08
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.08
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.07
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.06
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.05
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.05
PHA03207	392	serine/threonine kinase US3; Provisional	98.05
KOG0579|consensus	1187		98.03
KOG0585|consensus	576		98.03
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.03
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.0
KOG0659|consensus	318		97.99
KOG1989|consensus	738		97.99
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	97.98
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	97.98
KOG0200|consensus	609		97.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	97.96
KOG1151|consensus	775		97.94
KOG0614|consensus	732		97.93
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	97.93
KOG0577|consensus	948		97.92
PLN00009	294	cyclin-dependent kinase A; Provisional	97.92
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	97.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	97.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	97.91
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	97.9
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.88
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	97.87
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	97.87
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.86
PHA03209	357	serine/threonine kinase US3; Provisional	97.86
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	97.84
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.84
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.83
KOG0199|consensus	1039		97.83
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	97.83
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.83
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	97.82
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	97.82
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	97.81
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	97.81
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	97.81
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	97.79
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	97.77
KOG0661|consensus	538		97.76
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	97.75
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	97.74
KOG1152|consensus	772		97.73
KOG0663|consensus	419		97.71
KOG2052|consensus	513		97.7
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	97.7
PHA03211	461	serine/threonine kinase US3; Provisional	97.7
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.68
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.67
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	97.65
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	97.64
KOG0593|consensus	396		97.63
PRK10345	210	hypothetical protein; Provisional	97.6
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	97.6
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	97.6
KOG0195|consensus	448		97.59
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	97.57
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.56
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	97.54
KOG0986|consensus	591		97.52
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	97.5
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.5
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	97.49
KOG1025|consensus	1177		97.48
KOG0604|consensus	400		97.48
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	97.45
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	97.43
KOG3653|consensus	534		97.41
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	97.4
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	97.38
KOG4236|consensus	888		97.36
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	97.34
PHA03210	501	serine/threonine kinase US3; Provisional	97.33
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	97.29
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	97.28
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	97.27
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	97.24
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	97.22
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	97.22
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.19
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	97.15
KOG1023|consensus	484		97.11
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	97.11
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	97.09
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	97.07
KOG0594|consensus	323		97.06
PTZ00283	496	serine/threonine protein kinase; Provisional	97.05
PTZ00036	440	glycogen synthase kinase; Provisional	96.99
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	96.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	96.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	96.91
KOG0666|consensus	438		96.87
KOG0662|consensus	292		96.84
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	96.81
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	96.75
KOG1243|consensus	690		96.66
KOG1027|consensus	903		96.65
KOG0193|consensus	678		96.64
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	96.54
PRK14879	211	serine/threonine protein kinase; Provisional	96.44
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.39
KOG1345|consensus	378		96.38
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	96.37
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	96.35
KOG0658|consensus	364		96.3
KOG0660|consensus	359		96.18
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	96.17
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	96.07
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	96.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	95.96
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	95.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	95.94
KOG0603|consensus	612		95.9
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	95.84
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	95.8
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	95.71
KOG0596|consensus	677		95.6
KOG2345|consensus	302		95.53
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	95.38
PRK09188	365	serine/threonine protein kinase; Provisional	95.37
KOG0984|consensus	282		94.71
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	94.71
KOG0667|consensus	586		94.54
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	93.89
KOG0603|consensus	612		93.54
KOG0983|consensus	391		93.36
KOG1006|consensus	361		92.46
KOG1266|consensus	458		92.11
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	91.7
COG0515	384	SPS1 Serine/threonine protein kinase [General func	90.62
PLN03224	507	probable serine/threonine protein kinase; Provisio	90.17
PRK12274	218	serine/threonine protein kinase; Provisional	89.03
PTZ00284	467	protein kinase; Provisional	88.92
KOG1024|consensus	563		87.57
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	87.47
KOG0669|consensus	376		86.95
KOG3741|consensus	655		85.38
KOG0590|consensus	601		84.08
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	82.61
KOG1035|consensus	1351		82.28
KOG1167|consensus	418		80.6

>KOG0595|consensus

Probab=99.58  E-value=3e-15  Score=68.38  Aligned_cols=48  Identities=31%  Similarity=0.595  Sum_probs=44.1

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      +++.++|+||+.+++++.++++++++||||.+|+|..++++++.+++.
T Consensus        62 iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~  109 (429)
T KOG0595|consen   62 ILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEA  109 (429)
T ss_pred             HHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHH
Confidence            367889999999999999999999999999999999999999887763

>KOG0615|consensus

Probab=99.32  E-value=2.7e-12  Score=59.39  Aligned_cols=48  Identities=25%  Similarity=0.349  Sum_probs=42.9

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      ||+.++||+|+++++++..++..|+++|+..||+|++.+...+.+.++
T Consensus       229 ILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed  276 (475)
T KOG0615|consen  229 ILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLRED  276 (475)
T ss_pred             HHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccc
Confidence            477899999999999999999999999999999999999877666553

>KOG0598|consensus

Probab=99.29  E-value=5.2e-12  Score=57.33  Aligned_cols=48  Identities=23%  Similarity=0.367  Sum_probs=44.5

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      |+..++||+|+.++.+|++...++++.++..||.|+.++++.+.|+++
T Consensus        78 IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~  125 (357)
T KOG0598|consen   78 ILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSED  125 (357)
T ss_pred             HHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchh
Confidence            356789999999999999999999999999999999999999999875

>KOG0611|consensus

Probab=99.25  E-value=4.8e-12  Score=59.18  Aligned_cols=47  Identities=34%  Similarity=0.526  Sum_probs=43.9

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ||..++||+|++++..|...+.+.++|||..+|.|.+++...+.+++
T Consensus       106 IMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsE  152 (668)
T KOG0611|consen  106 IMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSE  152 (668)
T ss_pred             HHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccH
Confidence            47889999999999999999999999999999999999998888876

>KOG0610|consensus

Probab=99.23  E-value=1.1e-11  Score=57.34  Aligned_cols=47  Identities=26%  Similarity=0.463  Sum_probs=40.8

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc--CCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY--KIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~--~~~~~   47 (50)
                      ||+.+.||++..++..+.++.+.+++||||+||+|..++++.  +.|++
T Consensus       130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse  178 (459)
T KOG0610|consen  130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSE  178 (459)
T ss_pred             HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccch
Confidence            466789999999999999999999999999999999998764  33554

>KOG0575|consensus

Probab=99.23  E-value=2.7e-11  Score=57.78  Aligned_cols=46  Identities=26%  Similarity=0.538  Sum_probs=42.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      -+.++||||++++.+|.+.+++|++.|+|..+++..++++.+.+.|
T Consensus        72 Hr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltE  117 (592)
T KOG0575|consen   72 HRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTE  117 (592)
T ss_pred             HHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCc
Confidence            3578999999999999999999999999999999999998877766

>KOG0194|consensus

Probab=99.22  E-value=7.9e-12  Score=58.63  Aligned_cols=44  Identities=34%  Similarity=0.702  Sum_probs=40.0

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      +|+.++|+||+.++|.......+++++|++.+|+|.+++++.+.
T Consensus       214 vMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~  257 (474)
T KOG0194|consen  214 VMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK  257 (474)
T ss_pred             HHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC
Confidence            36779999999999999999999999999999999999998653

>KOG0616|consensus

Probab=99.19  E-value=6.2e-11  Score=53.37  Aligned_cols=48  Identities=25%  Similarity=0.503  Sum_probs=44.0

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      +++.+.||+++.+++.+.+...++++|++.++|.++.++++.++|++.
T Consensus        97 vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~  144 (355)
T KOG0616|consen   97 VLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEP  144 (355)
T ss_pred             HHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCch
Confidence            356788999999999999999999999999999999999999998873

>KOG0605|consensus

Probab=99.18  E-value=6.2e-11  Score=56.12  Aligned_cols=47  Identities=19%  Similarity=0.369  Sum_probs=42.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      |....+++++.++.+|++.+.+||+|||.+||++..++.+.+.++++
T Consensus       195 L~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~  241 (550)
T KOG0605|consen  195 LAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTED  241 (550)
T ss_pred             hhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchH
Confidence            44567899999999999999999999999999999999988888764

>KOG0588|consensus

Probab=99.17  E-value=5.7e-11  Score=57.67  Aligned_cols=48  Identities=29%  Similarity=0.502  Sum_probs=44.6

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      +|+-+.|||++.+++.|.+...+|++.||.++|.|++++..++++++.
T Consensus        65 iMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~  112 (786)
T KOG0588|consen   65 IMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPER  112 (786)
T ss_pred             HHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCH
Confidence            467789999999999999999999999999999999999999998874

>KOG0192|consensus

Probab=99.14  E-value=9.8e-11  Score=53.67  Aligned_cols=40  Identities=35%  Similarity=0.648  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~   41 (50)
                      |..++||||+.++|.+..+. ...+++||+++|+|..++..
T Consensus        93 l~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~  133 (362)
T KOG0192|consen   93 LSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHK  133 (362)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhh
Confidence            56789999999999998877 79999999999999999977

>KOG0197|consensus

Probab=99.09  E-value=1.8e-10  Score=54.07  Aligned_cols=41  Identities=32%  Similarity=0.640  Sum_probs=38.4

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +|+.++|++|+++++.+..+..++|++|+++.|+|.++++.
T Consensus       254 iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~  294 (468)
T KOG0197|consen  254 IMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRT  294 (468)
T ss_pred             HHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhh
Confidence            47889999999999999888899999999999999999987

>KOG1187|consensus

Probab=99.09  E-value=1.2e-10  Score=53.36  Aligned_cols=42  Identities=29%  Similarity=0.463  Sum_probs=37.1

Q ss_pred             CccCCCCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +..++|+|+++++|+|...+ ...+++||++.|+|.+++....
T Consensus       125 ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~  167 (361)
T KOG1187|consen  125 LSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKK  167 (361)
T ss_pred             HhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCC
Confidence            46788999999999999888 5999999999999999987654

>KOG0583|consensus

Probab=99.09  E-value=2.5e-10  Score=52.46  Aligned_cols=46  Identities=30%  Similarity=0.547  Sum_probs=41.4

Q ss_pred             CccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+. ||||++++..+.+...+++++||+.+|+|.+++...+++.+
T Consensus        73 ~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E  119 (370)
T KOG0583|consen   73 LRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKE  119 (370)
T ss_pred             HHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCCh
Confidence            45666 99999999999999999999999999999999998777766

>KOG0586|consensus

Probab=99.07  E-value=2.5e-10  Score=54.70  Aligned_cols=47  Identities=28%  Similarity=0.454  Sum_probs=42.7

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +|+.+.||||++++....++..+++++||+.+|.+++++.+++...+
T Consensus       108 imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e  154 (596)
T KOG0586|consen  108 IMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKE  154 (596)
T ss_pred             HHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchh
Confidence            36789999999999999999999999999999999999998877654

>KOG0581|consensus

Probab=99.03  E-value=4.6e-10  Score=51.33  Aligned_cols=46  Identities=35%  Similarity=0.811  Sum_probs=40.7

Q ss_pred             CccCCCCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||+|+.+|++|..+. .+.++|||+.+|+|...++..+.+++
T Consensus       131 l~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E  177 (364)
T KOG0581|consen  131 LRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPE  177 (364)
T ss_pred             HhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCH
Confidence            45678999999999999988 59999999999999999987777665

>KOG0592|consensus

Probab=98.98  E-value=6.7e-10  Score=53.08  Aligned_cols=47  Identities=23%  Similarity=0.506  Sum_probs=42.8

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      |..+ +||.|++++..|++...+|++++++++|+|.+++++.+.|++.
T Consensus       127 l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~  174 (604)
T KOG0592|consen  127 LTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDET  174 (604)
T ss_pred             HHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHH
Confidence            3455 7999999999999999999999999999999999999998874

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.97  E-value=1.9e-09  Score=48.86  Aligned_cols=46  Identities=24%  Similarity=0.479  Sum_probs=40.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+......++++|++++|++..++...+.+++
T Consensus        85 l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~  130 (340)
T PTZ00426         85 LNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPN  130 (340)
T ss_pred             HHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999987666554

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=2.2e-09  Score=48.98  Aligned_cols=46  Identities=22%  Similarity=0.470  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+.+....++++|++++|+|..++...+.+++
T Consensus        55 l~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~  100 (377)
T cd05629          55 LAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSE  100 (377)
T ss_pred             HHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999877665543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG1026|consensus

Probab=98.95  E-value=1.4e-09  Score=53.61  Aligned_cols=43  Identities=23%  Similarity=0.434  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      +..++|+||++++|.|...+.+++++||+..|||.++++...+
T Consensus       543 la~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP  585 (774)
T KOG1026|consen  543 LAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSP  585 (774)
T ss_pred             HHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCC
Confidence            4678999999999999999999999999999999999987655

>KOG0580|consensus

Probab=98.95  E-value=1.3e-09  Score=48.15  Aligned_cols=45  Identities=24%  Similarity=0.496  Sum_probs=39.3

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh--hcCCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH--TYKIFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~--~~~~~~~   47 (50)
                      ..++||||+++++++.++..++++.|+++.|++...++  ....+++
T Consensus        77 s~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e  123 (281)
T KOG0580|consen   77 SHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDE  123 (281)
T ss_pred             cccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccc
Confidence            46899999999999999999999999999999999998  4444544

>KOG0582|consensus

Probab=98.92  E-value=2.8e-09  Score=50.24  Aligned_cols=42  Identities=40%  Similarity=0.742  Sum_probs=38.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      |+.++||||++++.+|..+..+|++|.++.+|++.+.++..-
T Consensus        78 msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~  119 (516)
T KOG0582|consen   78 MSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYY  119 (516)
T ss_pred             hhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHc
Confidence            566899999999999999999999999999999999998643

>KOG0608|consensus

Probab=98.92  E-value=1.8e-09  Score=53.09  Aligned_cols=48  Identities=23%  Similarity=0.488  Sum_probs=42.7

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      ||..-.+..+++++.+|++.+.+|++|+|++||++..++-+.+.|+|+
T Consensus       682 ILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~  729 (1034)
T KOG0608|consen  682 ILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEED  729 (1034)
T ss_pred             hHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHH
Confidence            345567889999999999999999999999999999999988888763

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.91  E-value=4.5e-09  Score=48.06  Aligned_cols=46  Identities=26%  Similarity=0.578  Sum_probs=40.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++|+++++.+.+.+.+++++|++++|++...+.+.+.+++
T Consensus        55 l~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e  100 (382)
T cd05625          55 LAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPE  100 (382)
T ss_pred             HHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999877665543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=2.5e-09  Score=48.48  Aligned_cols=46  Identities=20%  Similarity=0.439  Sum_probs=40.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+.+++.+.+.+..++++|++++|+|..++...+.+++
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~  100 (364)
T cd05599          55 LAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTE  100 (364)
T ss_pred             HHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999887666554

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.91  E-value=4.2e-09  Score=47.50  Aligned_cols=46  Identities=28%  Similarity=0.693  Sum_probs=39.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+...+..++++|++++++|.+++...+.+++
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  102 (333)
T cd06650          57 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE  102 (333)
T ss_pred             HHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999877655443

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.91  E-value=3.4e-09  Score=47.69  Aligned_cols=46  Identities=20%  Similarity=0.387  Sum_probs=40.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+...+..++++|++.++++.+.+...+.+++
T Consensus        72 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  117 (329)
T PTZ00263         72 LMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPN  117 (329)
T ss_pred             HHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999887666554

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.91  E-value=4.3e-09  Score=48.16  Aligned_cols=46  Identities=24%  Similarity=0.590  Sum_probs=40.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++++++.+.+.+..++++|++++|+|..++...+.+++
T Consensus        55 l~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e  100 (381)
T cd05626          55 LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPE  100 (381)
T ss_pred             HHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999887666554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0597|consensus

Probab=98.90  E-value=2.7e-10  Score=55.06  Aligned_cols=47  Identities=28%  Similarity=0.497  Sum_probs=42.9

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      |++.++||||+.++++|.+...+|++.||+.+ +|..++..++.+|+.
T Consensus        54 i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe  100 (808)
T KOG0597|consen   54 ILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEE  100 (808)
T ss_pred             HHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHH
Confidence            35688999999999999999999999999986 999999999998874

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.90  E-value=4.7e-09  Score=47.87  Aligned_cols=46  Identities=24%  Similarity=0.522  Sum_probs=40.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++.+++.+...+.+++++|++++|+|.+++...+.+++
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~  100 (376)
T cd05598          55 LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEE  100 (376)
T ss_pred             HHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987666554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=5e-09  Score=46.84  Aligned_cols=46  Identities=20%  Similarity=0.333  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+...+..++++|++++|+|..++...+.+++
T Consensus        47 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~   92 (312)
T cd05585          47 LAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDL   92 (312)
T ss_pred             HHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987666554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PHA02988 hypothetical protein; Provisional

Probab=98.89  E-value=6.7e-09  Score=45.98  Aligned_cols=46  Identities=24%  Similarity=0.522  Sum_probs=37.9

Q ss_pred             CccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++++..    ....++++|++++|+|..++.....+++
T Consensus        72 l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~  121 (283)
T PHA02988         72 LRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSF  121 (283)
T ss_pred             HHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCCh
Confidence            567899999999998766    3568899999999999999987655543

>KOG4721|consensus

Probab=98.89  E-value=4e-09  Score=51.44  Aligned_cols=44  Identities=27%  Similarity=0.523  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIF   45 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~   45 (50)
                      |+.+.|+||+.+.|.|....-++++||||+.|.|...++..+..
T Consensus       166 LRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~i  209 (904)
T KOG4721|consen  166 LRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPI  209 (904)
T ss_pred             HHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCcc
Confidence            46789999999999999999999999999999999999876553

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.88  E-value=5.2e-09  Score=46.84  Aligned_cols=46  Identities=17%  Similarity=0.364  Sum_probs=39.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+...+..++++|++.++++...+.....+++
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~   97 (318)
T cd05582          52 LAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE   97 (318)
T ss_pred             HHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999876655543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.87  E-value=6.8e-09  Score=46.31  Aligned_cols=46  Identities=28%  Similarity=0.693  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+...+.+++++|++++++|..++...+.+++
T Consensus        53 l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~   98 (308)
T cd06615          53 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE   98 (308)
T ss_pred             HHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987655543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0589|consensus

Probab=98.87  E-value=2e-09  Score=50.32  Aligned_cols=42  Identities=36%  Similarity=0.669  Sum_probs=37.2

Q ss_pred             CccCCCCeeceeceEEEeCCE-EEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDK-LWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.||||+.+.++|..++. ++++|+|+.||++.+.+....
T Consensus        57 is~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k   99 (426)
T KOG0589|consen   57 LSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK   99 (426)
T ss_pred             HHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh
Confidence            356899999999999988887 999999999999999997644

>KOG0198|consensus

Probab=98.86  E-value=3.9e-09  Score=47.86  Aligned_cols=46  Identities=39%  Similarity=0.701  Sum_probs=38.1

Q ss_pred             CccCCCCeeceeceEEEeCC--EEEEEEeccCCCChHHHHhhcC-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD--KLWICMEYCGGGSLQDIYHTYK-IFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~--~~~l~~~~~~~~~l~~~~~~~~-~~~~   47 (50)
                      |+.++|++|++++|......  .+++.+||+++|++.+++.+.+ .+++
T Consensus        68 L~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E  116 (313)
T KOG0198|consen   68 LSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPE  116 (313)
T ss_pred             HHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCH
Confidence            56778999999999754444  6899999999999999999877 5655

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.85  E-value=8.5e-09  Score=46.36  Aligned_cols=46  Identities=24%  Similarity=0.415  Sum_probs=39.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|||++.+++.+...+..++++|+++++++...+...+.+++
T Consensus        49 l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~   94 (323)
T cd05595          49 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE   94 (323)
T ss_pred             HHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999988877665554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.85  E-value=1e-08  Score=46.21  Aligned_cols=45  Identities=31%  Similarity=0.759  Sum_probs=39.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+|++++++.+...+..++++|++++++|.+++.....++
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  101 (331)
T cd06649          57 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP  101 (331)
T ss_pred             HHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCC
Confidence            456889999999999999999999999999999999987655544

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.84  E-value=1.1e-08  Score=46.06  Aligned_cols=46  Identities=15%  Similarity=0.421  Sum_probs=39.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+|++++++.+...+..++++|++++++|..++...+.+++
T Consensus        55 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~  100 (333)
T cd05600          55 LTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSE  100 (333)
T ss_pred             HHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCH
Confidence            3456799999999999999999999999999999999987665543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.84  E-value=7.4e-09  Score=46.50  Aligned_cols=46  Identities=26%  Similarity=0.379  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+.+++.+...+..++++|+++++++...+...+.+++
T Consensus        54 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~   99 (323)
T cd05584          54 LEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFME   99 (323)
T ss_pred             HHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCH
Confidence            4578899999999999999999999999999999999887665543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.84  E-value=8.8e-09  Score=46.91  Aligned_cols=46  Identities=15%  Similarity=0.328  Sum_probs=40.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +..+.|++++.+++.+.+...+++++|++++|+|..++...+.+++
T Consensus        55 l~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~  100 (363)
T cd05628          55 LVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTE  100 (363)
T ss_pred             HHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987666554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.82  E-value=1.1e-08  Score=45.94  Aligned_cols=46  Identities=26%  Similarity=0.425  Sum_probs=39.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+|++.+++.+...+.+++++|+++++++...+...+.+++
T Consensus        49 l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   94 (323)
T cd05571          49 LQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE   94 (323)
T ss_pred             HHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999998877665544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.82  E-value=1.4e-08  Score=46.15  Aligned_cols=46  Identities=15%  Similarity=0.356  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +..+.|++++.+++.+.+.+.+++++|++++|+|..++...+.+++
T Consensus        55 l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~  100 (360)
T cd05627          55 LVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSE  100 (360)
T ss_pred             HHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCH
Confidence            3467899999999999999999999999999999999887666554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.80  E-value=3.6e-09  Score=46.86  Aligned_cols=46  Identities=26%  Similarity=0.374  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+.+....++++|++++++|.+++...+.+++
T Consensus        55 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  100 (291)
T cd05612          55 LKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSN  100 (291)
T ss_pred             HHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCH
Confidence            4567899999999988888999999999999999999987666554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.80  E-value=1.8e-08  Score=47.50  Aligned_cols=40  Identities=30%  Similarity=0.649  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+...+..++++|++++|+|.+.+..
T Consensus       119 l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~  158 (478)
T PTZ00267        119 LAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQ  158 (478)
T ss_pred             HHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHH
Confidence            4568999999999999999999999999999999887753

>KOG0032|consensus

Probab=98.80  E-value=1.1e-08  Score=47.38  Aligned_cols=42  Identities=26%  Similarity=0.532  Sum_probs=38.1

Q ss_pred             CCccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          1 MMKDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         1 ~l~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +|+.+. |||++.+++.+.+...+++++|++.+|.|++.+...
T Consensus        88 il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen   88 ILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK  130 (382)
T ss_pred             HHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc
Confidence            356776 999999999999999999999999999999998765

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.79  E-value=2e-08  Score=45.13  Aligned_cols=45  Identities=29%  Similarity=0.486  Sum_probs=39.1

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.++|+|++.+++.+...+..++++|++.++++...+...+.+++
T Consensus        51 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~   95 (323)
T cd05575          51 KNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPE   95 (323)
T ss_pred             hhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCH
Confidence            457899999999999999999999999999999998887665543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.77  E-value=2.3e-08  Score=44.93  Aligned_cols=45  Identities=24%  Similarity=0.455  Sum_probs=39.1

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.+.|+||+.+++.+...+..++++|+++++++...+...+.+++
T Consensus        51 ~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   95 (325)
T cd05604          51 KNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPE   95 (325)
T ss_pred             HhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCH
Confidence            457899999999999999999999999999999988877666554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.77  E-value=3e-08  Score=43.69  Aligned_cols=40  Identities=18%  Similarity=0.250  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+......++++|+++++++..++..
T Consensus        70 ~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~  109 (274)
T cd05076          70 MSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK  109 (274)
T ss_pred             HhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence            4567899999999999998999999999999999988865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1095|consensus

Probab=98.76  E-value=1.2e-08  Score=51.75  Aligned_cols=44  Identities=27%  Similarity=0.458  Sum_probs=39.6

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      +|+...||||+++.|.+.+....++++||+.+|+|..+++..++
T Consensus       748 ~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~  791 (1025)
T KOG1095|consen  748 LMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRP  791 (1025)
T ss_pred             HHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhccc
Confidence            46788999999999999888899999999999999999997643

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.76  E-value=2.4e-08  Score=44.90  Aligned_cols=46  Identities=26%  Similarity=0.429  Sum_probs=39.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++|+.+.+.+...+..++++|+++++++...+...+.+++
T Consensus        49 l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~   94 (325)
T cd05594          49 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE   94 (325)
T ss_pred             HHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            3457899999999999999999999999999999988876655543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.76  E-value=2.6e-08  Score=44.68  Aligned_cols=46  Identities=24%  Similarity=0.404  Sum_probs=39.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+|++.+++.+...+..++++|+++++++...+.....+++
T Consensus        50 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   95 (321)
T cd05603          50 LKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLE   95 (321)
T ss_pred             HHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCH
Confidence            3567899999999999999999999999999999988876655543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.76  E-value=2.7e-08  Score=44.90  Aligned_cols=46  Identities=28%  Similarity=0.443  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++.+.+.+...+..++++|+++++++...+...+.+++
T Consensus        49 l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~   94 (328)
T cd05593          49 LKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSE   94 (328)
T ss_pred             HHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999988876655543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0584|consensus

Probab=98.75  E-value=1.6e-08  Score=49.05  Aligned_cols=45  Identities=27%  Similarity=0.468  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCE--EEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDK--LWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      |+.|+|+||++++.+|.+...  +.++.|.+..|+|..++++++..+
T Consensus        95 LKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn  141 (632)
T KOG0584|consen   95 LKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVN  141 (632)
T ss_pred             HccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCC
Confidence            678999999999999987654  889999999999999999887654

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.75  E-value=2.5e-08  Score=45.00  Aligned_cols=42  Identities=17%  Similarity=0.411  Sum_probs=37.3

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +|++|+.+++++.+....++++|++++|+|..++...+.+++
T Consensus        54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~   95 (329)
T cd05588          54 NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPE   95 (329)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCH
Confidence            699999999999999999999999999999998877666654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.73  E-value=3.8e-08  Score=43.56  Aligned_cols=46  Identities=28%  Similarity=0.585  Sum_probs=39.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+|++.+++.+......++++|+++++++.+++...+.+++
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~  100 (290)
T cd05580          55 LQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPE  100 (290)
T ss_pred             HHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999887666554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.72  E-value=4.9e-08  Score=42.63  Aligned_cols=46  Identities=74%  Similarity=1.434  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.+++...+.+++
T Consensus        60 ~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  105 (267)
T cd06645          60 MKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSE  105 (267)
T ss_pred             HHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCH
Confidence            3467899999999999999999999999999999999876665543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.72  E-value=2.1e-08  Score=46.52  Aligned_cols=41  Identities=29%  Similarity=0.519  Sum_probs=35.7

Q ss_pred             CccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+. ||||+++++++...+..++++|++++|+|..++...
T Consensus        94 l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105          94 MTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             HHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHh
Confidence            34564 999999999999889999999999999999988653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.70  E-value=3.8e-08  Score=43.11  Aligned_cols=41  Identities=24%  Similarity=0.442  Sum_probs=36.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+...+..++++|++++|++..++...
T Consensus        60 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  100 (266)
T cd05064          60 LGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKH  100 (266)
T ss_pred             HhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhC
Confidence            35678999999999998889999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.70  E-value=5e-08  Score=43.90  Aligned_cols=40  Identities=28%  Similarity=0.599  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+...+..++++|+++++++.+++..
T Consensus        53 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (327)
T cd08227          53 SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT   92 (327)
T ss_pred             HHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHh
Confidence            3557899999999999999999999999999999998864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.70  E-value=5.8e-08  Score=43.27  Aligned_cols=46  Identities=20%  Similarity=0.437  Sum_probs=39.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+...+.+++++|+++++++..+++..+.+++
T Consensus        55 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~  100 (305)
T cd05609          55 LTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPV  100 (305)
T ss_pred             HHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCH
Confidence            3467899999999999888999999999999999999977665543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.70  E-value=5.3e-08  Score=42.49  Aligned_cols=46  Identities=35%  Similarity=0.660  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++.+.+...+..++++|+++++++.+++.+.+.+++
T Consensus        56 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  101 (265)
T cd06631          56 LKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPE  101 (265)
T ss_pred             HHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            3567899999999999988999999999999999999987665543

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.69  E-value=5.8e-08  Score=43.70  Aligned_cols=44  Identities=27%  Similarity=0.444  Sum_probs=38.4

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +.+.|+||+.+++.+...+..++++|++.++++...+...+.++
T Consensus        51 ~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~   94 (325)
T cd05602          51 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL   94 (325)
T ss_pred             HhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCC
Confidence            45789999999999999999999999999999999887765554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG4278|consensus

Probab=98.69  E-value=6.7e-09  Score=51.28  Aligned_cols=44  Identities=25%  Similarity=0.419  Sum_probs=40.0

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      +|+.+.|+|++++.|.|..+...|++.||+..|.|.++++....
T Consensus       316 vMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr  359 (1157)
T KOG4278|consen  316 VMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNR  359 (1157)
T ss_pred             HHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhch
Confidence            57889999999999999999999999999999999999987544

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.68  E-value=5.7e-08  Score=42.39  Aligned_cols=46  Identities=39%  Similarity=0.696  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++++++.+......++++|+++++++..++...+.+++
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  105 (267)
T cd06628          60 LKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEE  105 (267)
T ss_pred             HHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccH
Confidence            4567899999999999988999999999999999999987665543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.68  E-value=6e-08  Score=42.79  Aligned_cols=45  Identities=33%  Similarity=0.846  Sum_probs=38.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|++++++++.+......++++|+++++++..++...+.++
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~  101 (284)
T cd06620          57 MHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIP  101 (284)
T ss_pred             HHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCC
Confidence            346789999999999999999999999999999998887655443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0694|consensus

Probab=98.67  E-value=6.9e-09  Score=50.64  Aligned_cols=41  Identities=24%  Similarity=0.524  Sum_probs=34.3

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +||++++++++|+++++++++|||+.||++ ..++..+.|++
T Consensus       427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm-~~~~~~~~F~e  467 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGDL-MHHIHTDVFSE  467 (694)
T ss_pred             cCCeEeecccccccCCeEEEEEEecCCCcE-EEEEecccccH
Confidence            699999999999999999999999999994 44444456655

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.67  E-value=8.7e-08  Score=41.86  Aligned_cols=45  Identities=69%  Similarity=1.412  Sum_probs=38.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++.+++.+...+..++++|+++++++.+.+...+.++
T Consensus        60 l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~  104 (267)
T cd06646          60 VKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLS  104 (267)
T ss_pred             HHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCC
Confidence            356789999999999999999999999999999999887655544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.66  E-value=7.9e-08  Score=41.83  Aligned_cols=45  Identities=36%  Similarity=0.687  Sum_probs=38.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.+.+...+.++
T Consensus        58 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~  102 (263)
T cd06625          58 LKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALT  102 (263)
T ss_pred             HHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCC
Confidence            456789999999999999999999999999999999887655544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.66  E-value=4e-08  Score=45.67  Aligned_cols=41  Identities=32%  Similarity=0.562  Sum_probs=36.1

Q ss_pred             CccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+. |+|++++++.+.....+++++|++++|+|.+++...
T Consensus        94 l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107          94 MSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             HHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhc
Confidence            34565 999999999999988999999999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.65  E-value=4e-08  Score=43.02  Aligned_cols=41  Identities=20%  Similarity=0.446  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+......++++|++++|++..++...
T Consensus        49 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~   89 (269)
T cd05087          49 YRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSC   89 (269)
T ss_pred             HHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHh
Confidence            45678999999999988888899999999999999988753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.65  E-value=8.2e-08  Score=44.05  Aligned_cols=41  Identities=24%  Similarity=0.481  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++++.+....++++|++++|+|..++...
T Consensus        97 l~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~  137 (370)
T cd05596          97 MAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY  137 (370)
T ss_pred             HHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc
Confidence            45678999999999999999999999999999999988753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.65  E-value=7.6e-08  Score=42.14  Aligned_cols=46  Identities=37%  Similarity=0.565  Sum_probs=39.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.++++..+.+++
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  107 (272)
T cd06629          62 LKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEE  107 (272)
T ss_pred             HHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCH
Confidence            4567899999999999888999999999999999999887655543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG1094|consensus

Probab=98.64  E-value=8.3e-09  Score=50.32  Aligned_cols=43  Identities=26%  Similarity=0.488  Sum_probs=39.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      |.+++||||+++.+.|..++.+++++||...|+|..++..+..
T Consensus       589 LsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahea  631 (807)
T KOG1094|consen  589 LSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHEL  631 (807)
T ss_pred             HhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccC
Confidence            5678999999999999999999999999999999999987644

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.64  E-value=9.1e-08  Score=43.97  Aligned_cols=41  Identities=22%  Similarity=0.497  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.||+++++++.+.+....++++|++++|+|..++...
T Consensus        97 ~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~  137 (370)
T cd05621          97 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY  137 (370)
T ss_pred             HHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc
Confidence            35678999999999999999999999999999999988754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.64  E-value=4.9e-08  Score=42.56  Aligned_cols=46  Identities=24%  Similarity=0.449  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|++++++++.+...+..+++++++.++++.+.+...+++++
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~  102 (268)
T cd06630          57 MARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE  102 (268)
T ss_pred             HHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCH
Confidence            3567899999999999988999999999999999999877665543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.63  E-value=6.6e-08  Score=42.31  Aligned_cols=40  Identities=18%  Similarity=0.482  Sum_probs=35.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.++|+|++++++.+......++++|++++|++.+++...
T Consensus        50 ~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~   89 (269)
T cd05042          50 RELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSN   89 (269)
T ss_pred             HhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhc
Confidence            4578999999999998888999999999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.63  E-value=2.4e-07  Score=41.73  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=37.1

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ..||+++.+++.+.+.+..++++|++++|+|...+.....++
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~   94 (316)
T cd05619          53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFD   94 (316)
T ss_pred             cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence            479999999999999999999999999999999988655544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.63  E-value=1e-07  Score=42.44  Aligned_cols=41  Identities=27%  Similarity=0.435  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +..+.|+|++++++.+...+..++++|++.++++.+++...
T Consensus        73 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (304)
T cd05096          73 LSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSH  113 (304)
T ss_pred             HhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            45678999999999998888999999999999999988653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.63  E-value=2.3e-07  Score=41.97  Aligned_cols=43  Identities=19%  Similarity=0.423  Sum_probs=37.5

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .+|+|++.+++++...+..++++|+++++++...+...+.+++
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~   95 (329)
T cd05618          53 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE   95 (329)
T ss_pred             CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCH
Confidence            3799999999999999999999999999999988876665554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0576|consensus

Probab=98.62  E-value=3.3e-09  Score=52.01  Aligned_cols=47  Identities=70%  Similarity=1.427  Sum_probs=40.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      ++.+.|+||+.+++++...+.+|+.||||.+|++.+.-...++++++
T Consensus        66 ~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tgplsel  112 (829)
T KOG0576|consen   66 LRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSEL  112 (829)
T ss_pred             eecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhH
Confidence            56789999999999999999999999999999998876666666553

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.61  E-value=1.5e-07  Score=40.87  Aligned_cols=45  Identities=67%  Similarity=1.350  Sum_probs=38.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~   46 (50)
                      ++.++|++++++++.+......++++|+++++++..++... ..++
T Consensus        54 l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~   99 (262)
T cd06613          54 LKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLS   99 (262)
T ss_pred             HHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCC
Confidence            45679999999999999999999999999999999988764 4444

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.61  E-value=6.2e-08  Score=43.79  Aligned_cols=46  Identities=28%  Similarity=0.582  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++.+++.+...+..++++|++++++|..++...+.+++
T Consensus        55 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  100 (350)
T cd05573          55 LADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPE  100 (350)
T ss_pred             HHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999887655543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.61  E-value=1.1e-07  Score=41.61  Aligned_cols=41  Identities=29%  Similarity=0.408  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+...+..++++|+++++++.+++...
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   99 (267)
T cd05066          59 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKH   99 (267)
T ss_pred             HHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhc
Confidence            45678999999999998888999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0574|consensus

Probab=98.60  E-value=1.3e-08  Score=46.75  Aligned_cols=44  Identities=45%  Similarity=1.090  Sum_probs=38.6

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      +|+++.+++++.++|++.....+|++||||.-|++.+.++.++.
T Consensus        81 IMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K  124 (502)
T KOG0574|consen   81 IMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRK  124 (502)
T ss_pred             HHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcC
Confidence            46788999999999999888889999999999999999875433

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=98.60  E-value=3.7e-08  Score=45.21  Aligned_cols=40  Identities=23%  Similarity=0.340  Sum_probs=35.6

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .||||+++++.+...+..++++|++++|+|..+++..
T Consensus        93 ~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104          93 SYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             HHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhc
Confidence            345 7999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.60  E-value=2.6e-07  Score=41.58  Aligned_cols=43  Identities=23%  Similarity=0.397  Sum_probs=37.7

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|++|+.+++.+...+..++++|++++|+|...+...+.+++
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~   95 (316)
T cd05592          53 WEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDE   95 (316)
T ss_pred             cCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence            4799999999999999999999999999999999877666554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.60  E-value=9.2e-08  Score=47.98  Aligned_cols=40  Identities=23%  Similarity=0.425  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++||||+++++++......++++||+++|++.++++.
T Consensus       737 l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  776 (968)
T PLN00113        737 MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN  776 (968)
T ss_pred             HhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc
Confidence            4567999999999999988899999999999999998853

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.60  E-value=9e-08  Score=41.75  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+|++.+++.+......++++|++++|++..++...+
T Consensus        53 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~   94 (258)
T cd05078          53 MSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNK   94 (258)
T ss_pred             HHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCC
Confidence            356789999999999998888999999999999999987543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.60  E-value=7.2e-08  Score=42.28  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+......++++|++++|+|..++...
T Consensus        49 ~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   89 (268)
T cd05086          49 YRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQE   89 (268)
T ss_pred             HhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhh
Confidence            34578999999999999888999999999999999988753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0591|consensus

Probab=98.59  E-value=6.8e-10  Score=50.12  Aligned_cols=41  Identities=34%  Similarity=0.763  Sum_probs=34.4

Q ss_pred             CCccCCCCeeceece-EEEeCCE-EEEEEeccCCCChHHHHhh
Q psy13313          1 MMKDCKHHNIIAYYG-SYLRKDK-LWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~-~~~~~~~-~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++++++||||+++++ .+..++. +++++|+|..|+|...++.
T Consensus        71 lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~  113 (375)
T KOG0591|consen   71 LLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKH  113 (375)
T ss_pred             HHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHH
Confidence            367899999999987 5655555 8999999999999998864

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.58  E-value=1.9e-07  Score=42.20  Aligned_cols=44  Identities=18%  Similarity=0.397  Sum_probs=37.4

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~   46 (50)
                      ..+.|++++.+++.+...+..++++|++++|+|..++... ..++
T Consensus        56 ~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~  100 (331)
T cd05624          56 VNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLP  100 (331)
T ss_pred             HhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCC
Confidence            4568999999999999999999999999999999998763 3444

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.58  E-value=2.4e-07  Score=40.89  Aligned_cols=41  Identities=17%  Similarity=0.237  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++.+++.+......++++|+++++++...+...
T Consensus        47 l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~   87 (277)
T cd05607          47 LEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNV   87 (277)
T ss_pred             HHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhc
Confidence            45688999999999999889999999999999998877543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.58  E-value=1.1e-07  Score=41.39  Aligned_cols=45  Identities=31%  Similarity=0.713  Sum_probs=38.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++.+.+.+......++++|+.++++|.+++.+...++
T Consensus        47 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   91 (262)
T cd05572          47 LEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFD   91 (262)
T ss_pred             HHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCC
Confidence            356789999999999888889999999999999999988765544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.58  E-value=2.2e-07  Score=41.84  Aligned_cols=43  Identities=23%  Similarity=0.411  Sum_probs=37.6

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|++++.+++++...+..++++|++++|+|...+...+.+++
T Consensus        53 ~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~   95 (320)
T cd05590          53 RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE   95 (320)
T ss_pred             cCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCH
Confidence            3699999999999999999999999999999998877666554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.58  E-value=1.3e-07  Score=42.55  Aligned_cols=45  Identities=27%  Similarity=0.440  Sum_probs=38.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~   46 (50)
                      ++.+.|++++.+++.+......++++|++++++|..++... ..++
T Consensus        55 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~  100 (330)
T cd05601          55 LSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFD  100 (330)
T ss_pred             HHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCC
Confidence            34568999999999998889999999999999999998765 4444

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0690|consensus

Probab=98.58  E-value=5e-09  Score=48.39  Aligned_cols=47  Identities=26%  Similarity=0.470  Sum_probs=42.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      ++...||++..+..++++.+.++++|||..||.|+-++.+.+.|+++
T Consensus       222 L~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~  268 (516)
T KOG0690|consen  222 LQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSED  268 (516)
T ss_pred             HHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccch
Confidence            56778999999999999999999999999999999999888777765

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.57  E-value=1.8e-07  Score=43.02  Aligned_cols=41  Identities=22%  Similarity=0.474  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++++++.+......++++|++++|+|..++...
T Consensus        97 ~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~  137 (371)
T cd05622          97 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY  137 (371)
T ss_pred             HHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc
Confidence            34578999999999999999999999999999999988754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0612|consensus

Probab=98.57  E-value=9.8e-09  Score=52.57  Aligned_cols=43  Identities=19%  Similarity=0.398  Sum_probs=38.6

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      -..+.|++++.+|++..++|++|+|++||++..++.+.+++|+
T Consensus       132 ~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE  174 (1317)
T KOG0612|consen  132 GNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPE  174 (1317)
T ss_pred             CCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChH
Confidence            3567889999999999999999999999999999998887776

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.57  E-value=1.3e-07  Score=41.10  Aligned_cols=40  Identities=23%  Similarity=0.484  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+++.+......++++|++++|++.+.+..
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~   92 (256)
T cd05114          53 MMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQ   92 (256)
T ss_pred             HHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHh
Confidence            4567899999999999888899999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.57  E-value=1.8e-07  Score=42.33  Aligned_cols=39  Identities=18%  Similarity=0.366  Sum_probs=35.3

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.++|++++.+++.+...+.+++++|++++++|..++..
T Consensus        56 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~   94 (331)
T cd05597          56 VNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             HhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHH
Confidence            456899999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.57  E-value=1.3e-07  Score=40.99  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+|++++++.+......++++|+++++++.+++...+
T Consensus        47 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   88 (252)
T cd05084          47 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG   88 (252)
T ss_pred             HHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCC
Confidence            456789999999999988889999999999999999986543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.56  E-value=2.9e-07  Score=41.48  Aligned_cols=39  Identities=26%  Similarity=0.528  Sum_probs=34.8

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+.|+|++++++++...+..++++|+++++++...+..
T Consensus        57 ~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~   95 (324)
T cd05589          57 NSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT   95 (324)
T ss_pred             cccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc
Confidence            456899999999999999999999999999999887764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0196|consensus

Probab=98.56  E-value=1.5e-07  Score=47.34  Aligned_cols=42  Identities=29%  Similarity=0.423  Sum_probs=38.4

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ||.+..||||+.+.|.+.....++++.||+.+|+|..+++.+
T Consensus       683 IMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~  724 (996)
T KOG0196|consen  683 IMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQN  724 (996)
T ss_pred             hcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhc
Confidence            577889999999999999899999999999999999999764

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.56  E-value=3e-07  Score=40.50  Aligned_cols=40  Identities=48%  Similarity=0.994  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+......++++|+++++++.+++..
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~   95 (277)
T cd06640          56 LSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA   95 (277)
T ss_pred             HHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc
Confidence            3567899999999999999999999999999999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.55  E-value=2.3e-07  Score=40.32  Aligned_cols=41  Identities=39%  Similarity=0.651  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+...+..++++|+++++++.+.+...
T Consensus        53 l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~   93 (256)
T cd08221          53 LSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQ   93 (256)
T ss_pred             HHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhc
Confidence            45678999999999999999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.55  E-value=4e-07  Score=41.00  Aligned_cols=42  Identities=29%  Similarity=0.416  Sum_probs=37.3

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|+|++.+++.+...+.+++++|++++++|...+...+.+++
T Consensus        54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~   95 (318)
T cd05570          54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDE   95 (318)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCH
Confidence            699999999999999999999999999999998887666554

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.55  E-value=4.8e-07  Score=40.74  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=37.6

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|++++.+++.+...+.+++++|++.++++...+...+.+++
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~   95 (316)
T cd05620          53 WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDL   95 (316)
T ss_pred             cCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCH
Confidence            4799999999999999999999999999999998877665543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.55  E-value=1.9e-07  Score=40.44  Aligned_cols=45  Identities=36%  Similarity=0.710  Sum_probs=38.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|++++++++.+......++++|+++++++..++.+...++
T Consensus        56 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~  100 (258)
T cd06632          56 LSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFP  100 (258)
T ss_pred             HHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCC
Confidence            356789999999999988889999999999999999987665443

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.55  E-value=4.7e-07  Score=40.78  Aligned_cols=43  Identities=30%  Similarity=0.446  Sum_probs=37.5

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|++++.+++.+...+..++++|+++++++...+...+.+++
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~   95 (321)
T cd05591          53 AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDE   95 (321)
T ss_pred             cCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            3799999999999999999999999999999988877666554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.54  E-value=8.8e-08  Score=41.96  Aligned_cols=41  Identities=37%  Similarity=0.814  Sum_probs=33.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+...+..++++|+++.|+|.+++...
T Consensus        55 l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~   95 (259)
T PF07714_consen   55 LRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSK   95 (259)
T ss_dssp             HHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc
Confidence            34579999999999998777899999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0599|consensus

Probab=98.54  E-value=1.1e-08  Score=46.38  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=38.0

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..||+|+.+.+.+.++.+++++++.++.|.|++++...-.+++
T Consensus        80 ~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSE  122 (411)
T KOG0599|consen   80 MGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSE  122 (411)
T ss_pred             cCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecH
Confidence            3799999999999999999999999999999999986655444

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.54  E-value=6.3e-07  Score=39.48  Aligned_cols=42  Identities=21%  Similarity=0.240  Sum_probs=36.9

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++++++++.+...+..++++|++++++|..++.....+++
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~  108 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSE  108 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCH
Confidence            699999999999999999999999999999999987655443

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.52  E-value=3.4e-07  Score=40.32  Aligned_cols=41  Identities=41%  Similarity=1.010  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++.+......++++|+++++++..++...
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   96 (280)
T cd06611          56 LSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLEL   96 (280)
T ss_pred             HHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHh
Confidence            45678999999999999999999999999999999988753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.52  E-value=7.8e-07  Score=38.78  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=37.8

Q ss_pred             cCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          4 DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ...|++++++++.+...+..++++|+++++++..+++..+.+++
T Consensus        53 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   96 (260)
T cd05611          53 QGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPE   96 (260)
T ss_pred             cCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCH
Confidence            34799999999999888999999999999999999987655543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.51  E-value=4.2e-07  Score=41.12  Aligned_cols=39  Identities=18%  Similarity=0.384  Sum_probs=35.4

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ..+.|++++.+++.+...+..++++|++++|+|..++..
T Consensus        56 ~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~   94 (332)
T cd05623          56 VNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSK   94 (332)
T ss_pred             hhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHH
Confidence            456899999999999999999999999999999999976

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.51  E-value=1.8e-07  Score=40.99  Aligned_cols=42  Identities=19%  Similarity=0.424  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++.+++.+......++++|++++++|.+++....
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~  103 (275)
T cd05046          62 FRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATK  103 (275)
T ss_pred             HHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcc
Confidence            456789999999998888888999999999999999987654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.51  E-value=3.4e-07  Score=40.38  Aligned_cols=40  Identities=23%  Similarity=0.452  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+......++++|+++++++.+++..
T Consensus        61 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  100 (283)
T cd05090          61 MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIM  100 (283)
T ss_pred             HhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHh
Confidence            4678899999999999888899999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.51  E-value=8.9e-07  Score=40.07  Aligned_cols=42  Identities=17%  Similarity=0.395  Sum_probs=36.9

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++++.+++++.....+++++|++++++|...+...+.+++
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~   95 (327)
T cd05617          54 SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPE   95 (327)
T ss_pred             CCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            699999999999999999999999999999988876666554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.50  E-value=2.8e-07  Score=40.55  Aligned_cols=41  Identities=20%  Similarity=0.361  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++.+++.+......++++|++++++|.++++..
T Consensus        63 l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  103 (277)
T cd05062          63 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL  103 (277)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHc
Confidence            35678999999999988888899999999999999998753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.50  E-value=9.3e-08  Score=43.95  Aligned_cols=40  Identities=23%  Similarity=0.445  Sum_probs=35.5

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|+||+++++++.....+++++|++++|+|.++++..
T Consensus        96 ~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~  136 (374)
T cd05106          96 SHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKK  136 (374)
T ss_pred             HhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhh
Confidence            455 7999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.49  E-value=4.5e-07  Score=39.95  Aligned_cols=42  Identities=19%  Similarity=0.276  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|++++.+++.+...+..++++|+++++++...+....
T Consensus        47 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~   88 (277)
T cd05577          47 LEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVG   88 (277)
T ss_pred             HHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcC
Confidence            456789999999999988899999999999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.49  E-value=3.4e-07  Score=39.97  Aligned_cols=41  Identities=22%  Similarity=0.491  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+......++++|++.++++.+++...
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~   93 (256)
T cd05113          53 MMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH   93 (256)
T ss_pred             HhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc
Confidence            45678999999999988888899999999999999988753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.49  E-value=3.4e-07  Score=40.57  Aligned_cols=40  Identities=18%  Similarity=0.295  Sum_probs=35.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++.+++.+.+.+..+++++++.++++...+..
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   93 (285)
T cd05605          54 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYN   93 (285)
T ss_pred             HHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHh
Confidence            4567899999999999888999999999999999887754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.48  E-value=4e-07  Score=40.41  Aligned_cols=42  Identities=24%  Similarity=0.487  Sum_probs=37.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+|++++++.+......++++|+++++++.+++...+
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~  102 (291)
T cd05094          61 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG  102 (291)
T ss_pred             HhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcC
Confidence            456789999999999988889999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.48  E-value=7.6e-08  Score=41.86  Aligned_cols=45  Identities=13%  Similarity=0.353  Sum_probs=38.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+|++++++.+......+++++++.++++...+.....++
T Consensus        54 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   98 (258)
T cd05578          54 LQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFS   98 (258)
T ss_pred             HHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcC
Confidence            456789999999999988899999999999999999987664444

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.48  E-value=2.6e-07  Score=40.06  Aligned_cols=41  Identities=37%  Similarity=0.601  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++.+++.+...+..++++|+++++++.+++...
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   93 (256)
T cd08529          53 LAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQ   93 (256)
T ss_pred             HHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHh
Confidence            45678999999999999889999999999999999988764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG4257|consensus

Probab=98.47  E-value=1.5e-07  Score=46.63  Aligned_cols=41  Identities=27%  Similarity=0.566  Sum_probs=35.9

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +|+...||+|++++|.+.. ...|++||.++.|.|..+++..
T Consensus       444 iMrnfdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~n  484 (974)
T KOG4257|consen  444 IMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQN  484 (974)
T ss_pred             HHHhCCCcchhheeeeeec-cceeEEEecccchhHHHHHHhc
Confidence            4678899999999998754 6789999999999999999864

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.46  E-value=3.3e-07  Score=40.59  Aligned_cols=41  Identities=20%  Similarity=0.362  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+......++++|++++|+|..+++..
T Consensus        63 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  103 (288)
T cd05061          63 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL  103 (288)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHh
Confidence            45678999999999988888899999999999999999753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.46  E-value=3e-07  Score=39.93  Aligned_cols=41  Identities=29%  Similarity=0.485  Sum_probs=35.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++++++.+.. ...++++|+++++++..++....
T Consensus        55 l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~   95 (259)
T cd05037          55 MSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREK   95 (259)
T ss_pred             HHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhc
Confidence            456789999999998877 67889999999999999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.45  E-value=6.3e-07  Score=39.50  Aligned_cols=40  Identities=48%  Similarity=1.002  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+++.+......++++|+++++++..++..
T Consensus        56 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~   95 (277)
T cd06641          56 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP   95 (277)
T ss_pred             HHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc
Confidence            3567899999999999999999999999999999988864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.45  E-value=3.4e-07  Score=40.04  Aligned_cols=40  Identities=30%  Similarity=0.500  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+......++++|+.+++++.+++..
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~   92 (269)
T cd05044          53 MSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRD   92 (269)
T ss_pred             HHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHH
Confidence            4567899999999998888889999999999999998865

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.45  E-value=8.2e-07  Score=38.63  Aligned_cols=40  Identities=38%  Similarity=0.702  Sum_probs=35.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++.+.+.+.+.+++++++++++++...+..
T Consensus        52 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   91 (255)
T cd08219          52 LAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKL   91 (255)
T ss_pred             HHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHh
Confidence            3567899999999999999999999999999999888764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.45  E-value=6.2e-07  Score=39.51  Aligned_cols=42  Identities=24%  Similarity=0.439  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|++++.+++.+......++++|+++++++.+++....
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~  103 (283)
T cd05048          62 MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNS  103 (283)
T ss_pred             HHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcC
Confidence            356789999999999888888999999999999999987643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.44  E-value=4.6e-07  Score=39.70  Aligned_cols=41  Identities=24%  Similarity=0.374  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+.+.+......++++|+++++++..++...
T Consensus        59 l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (269)
T cd05065          59 MGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQN   99 (269)
T ss_pred             HHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhC
Confidence            35678999999999998888999999999999999988753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.44  E-value=5.2e-07  Score=39.10  Aligned_cols=41  Identities=24%  Similarity=0.499  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+......++++|+++++++..++...
T Consensus        46 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   86 (250)
T cd05085          46 LKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKK   86 (250)
T ss_pred             HHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhc
Confidence            34678999999999998888999999999999999988653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.44  E-value=1.8e-07  Score=40.57  Aligned_cols=45  Identities=22%  Similarity=0.478  Sum_probs=38.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|+|++++++.+......++++++++++++..++.+.+.++
T Consensus        47 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~   91 (265)
T cd05579          47 LSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLD   91 (265)
T ss_pred             HHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCC
Confidence            345789999999998888899999999999999999988755544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0578|consensus

Probab=98.44  E-value=3.2e-08  Score=47.48  Aligned_cols=42  Identities=45%  Similarity=0.866  Sum_probs=36.9

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +|+..+|+||+.+++++.-.+.+|++|||+.+|+|.+.+...
T Consensus       323 Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~  364 (550)
T KOG0578|consen  323 VMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT  364 (550)
T ss_pred             HHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc
Confidence            467889999999999888889999999999999998877643

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.44  E-value=6.9e-07  Score=40.35  Aligned_cols=45  Identities=13%  Similarity=0.267  Sum_probs=37.8

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.+ +|++++.+++.+...+..++++|++.+|++..++.....+++
T Consensus        59 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~  104 (332)
T cd05614          59 EHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSE  104 (332)
T ss_pred             HhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            345 589999999999888999999999999999999877665554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.44  E-value=3.8e-07  Score=40.76  Aligned_cols=41  Identities=27%  Similarity=0.479  Sum_probs=36.0

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ..+ +|+|++++++.+...+..++++|+++++++..++...+
T Consensus        62 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  103 (303)
T cd05088          62 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR  103 (303)
T ss_pred             HHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcc
Confidence            345 79999999999988899999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.44  E-value=4.6e-07  Score=39.81  Aligned_cols=42  Identities=24%  Similarity=0.502  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++.+++.+......+++++++++++|.+++...+
T Consensus        62 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~  103 (280)
T cd05049          62 LTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHG  103 (280)
T ss_pred             HHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcC
Confidence            456789999999999998899999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.43  E-value=7.2e-07  Score=39.52  Aligned_cols=40  Identities=33%  Similarity=0.570  Sum_probs=35.2

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ +|+|++++++.+......++++|+++++++..+++..
T Consensus        70 ~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~  110 (293)
T cd05053          70 KMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRAR  110 (293)
T ss_pred             HhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhc
Confidence            345 7999999999998888999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.43  E-value=4.6e-07  Score=39.49  Aligned_cols=41  Identities=20%  Similarity=0.355  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++.+......++++|+++++++.+++...
T Consensus        56 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   96 (261)
T cd05148          56 LKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSP   96 (261)
T ss_pred             HhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcC
Confidence            45778999999999999889999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.43  E-value=6.6e-07  Score=38.96  Aligned_cols=45  Identities=36%  Similarity=0.830  Sum_probs=38.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|++++++++.....+..++++|+++++++.+.+.....++
T Consensus        53 ~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~   97 (264)
T cd06626          53 LELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILD   97 (264)
T ss_pred             HHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCC
Confidence            456789999999999888899999999999999999987654443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.43  E-value=9.6e-07  Score=39.04  Aligned_cols=42  Identities=60%  Similarity=1.058  Sum_probs=37.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+|++.+++.+......+++++++.+++|.+++....
T Consensus        69 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  110 (286)
T cd06614          69 MKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF  110 (286)
T ss_pred             HHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc
Confidence            356789999999999999999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.43  E-value=6.9e-07  Score=39.73  Aligned_cols=42  Identities=26%  Similarity=0.384  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|++++.+++.+...+..++++|+++++++..++....
T Consensus        73 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05095          73 MSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHE  114 (296)
T ss_pred             HHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcC
Confidence            456789999999999988899999999999999999987643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.43  E-value=6.9e-07  Score=39.61  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+...+..+++++++.++++.+++...
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (290)
T cd05045          57 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRES   97 (290)
T ss_pred             HhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhc
Confidence            45678999999999988888899999999999999988753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.43  E-value=7.2e-07  Score=38.80  Aligned_cols=44  Identities=27%  Similarity=0.704  Sum_probs=38.1

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +.++|++++++++.+......++++++++++++.+++.....++
T Consensus        54 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   97 (264)
T cd06623          54 RSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIP   97 (264)
T ss_pred             HhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCC
Confidence            45679999999999999999999999999999999988655544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.43  E-value=3.7e-07  Score=41.24  Aligned_cols=40  Identities=20%  Similarity=0.459  Sum_probs=32.9

Q ss_pred             ccC-CCCeeceeceEEEeC-CEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRK-DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ +|+||+++++.+... ..+++++|++++|+|.+++...
T Consensus        65 ~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~  106 (338)
T cd05102          65 IHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAK  106 (338)
T ss_pred             HHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhc
Confidence            345 799999999977654 4688999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.43  E-value=6.1e-07  Score=39.77  Aligned_cols=42  Identities=24%  Similarity=0.541  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.+++...+
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~  102 (288)
T cd05093          61 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG  102 (288)
T ss_pred             HHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcC
Confidence            456789999999999988899999999999999999987543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.42  E-value=6.8e-07  Score=38.98  Aligned_cols=41  Identities=24%  Similarity=0.503  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.+++...
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   93 (256)
T cd05059          53 MMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER   93 (256)
T ss_pred             HHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhc
Confidence            45678999999999988888999999999999999988653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.42  E-value=6.4e-07  Score=39.24  Aligned_cols=41  Identities=34%  Similarity=0.433  Sum_probs=36.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+...+..++++|++++++|...+...
T Consensus        59 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (268)
T cd06624          59 HSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSK   99 (268)
T ss_pred             HHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHh
Confidence            35678999999999999889999999999999999988753

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.42  E-value=8.5e-07  Score=38.98  Aligned_cols=41  Identities=49%  Similarity=1.044  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+.+.+......++++|+++++++.+++...
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~   93 (274)
T cd06609          53 LSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG   93 (274)
T ss_pred             HHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc
Confidence            35678999999999999999999999999999999988754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.41  E-value=9.1e-07  Score=39.10  Aligned_cols=42  Identities=21%  Similarity=0.452  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+|++.+++.+......++++|+++++++.+++....
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~  102 (280)
T cd05092          61 LTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHG  102 (280)
T ss_pred             HhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcC
Confidence            356789999999999988889999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.41  E-value=6.1e-07  Score=39.43  Aligned_cols=41  Identities=27%  Similarity=0.479  Sum_probs=35.6

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+ .|++++++++.+...+..++++|+++++++.+++....
T Consensus        50 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~   91 (270)
T cd05047          50 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR   91 (270)
T ss_pred             HhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhcc
Confidence            345 79999999999988888999999999999999987543

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.41  E-value=6.6e-07  Score=40.04  Aligned_cols=41  Identities=24%  Similarity=0.443  Sum_probs=35.8

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+ +|+|++++++.+...+..++++|++++++|..+++..
T Consensus        92 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~  133 (302)
T cd05055          92 MSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRK  133 (302)
T ss_pred             HHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhC
Confidence            3456 7999999999998889999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.41  E-value=7.4e-07  Score=39.45  Aligned_cols=39  Identities=18%  Similarity=0.266  Sum_probs=34.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|++++.+.+.+......++++|++++|++...+.
T Consensus        47 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~   85 (280)
T cd05608          47 LAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIY   85 (280)
T ss_pred             HHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHH
Confidence            456789999999998888889999999999999987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0695|consensus

Probab=98.41  E-value=1.2e-07  Score=44.29  Aligned_cols=44  Identities=16%  Similarity=0.375  Sum_probs=40.2

Q ss_pred             cCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          4 DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .-+||+++-++.+++++..++++.||.++|+|.-.+++.+++|+
T Consensus       307 asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpe  350 (593)
T KOG0695|consen  307 ASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE  350 (593)
T ss_pred             ccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcH
Confidence            45799999999999999999999999999999999998888776

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.41  E-value=1.1e-06  Score=43.28  Aligned_cols=44  Identities=27%  Similarity=0.486  Sum_probs=37.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +.+.|++|+.+++.+.....+++++|++.+++|..++...+.++
T Consensus        59 ~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~  102 (669)
T cd05610          59 ALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFD  102 (669)
T ss_pred             HhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCC
Confidence            45689999999999999999999999999999999987655444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.41  E-value=9e-07  Score=38.75  Aligned_cols=41  Identities=29%  Similarity=0.387  Sum_probs=36.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++.+.+...+..++++|+++++++..++...
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  100 (268)
T cd05063          60 MGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDH  100 (268)
T ss_pred             HhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhc
Confidence            45678999999999998889999999999999999988653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.40  E-value=4.8e-07  Score=39.46  Aligned_cols=41  Identities=27%  Similarity=0.539  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++++++.+...+..++++|+++++++.+++...
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   95 (261)
T cd05072          55 MKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSD   95 (261)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHh
Confidence            45678999999999988888899999999999999988653

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.40  E-value=1e-06  Score=39.28  Aligned_cols=40  Identities=48%  Similarity=0.901  Sum_probs=35.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+.+.+......++++|+++++++..++..
T Consensus        71 l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  110 (296)
T cd06654          71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  110 (296)
T ss_pred             HHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh
Confidence            3567899999999999888999999999999999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.40  E-value=6e-07  Score=39.40  Aligned_cols=40  Identities=25%  Similarity=0.441  Sum_probs=34.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|||++.+++++......++++|+++++++..++..
T Consensus        58 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   97 (262)
T cd05077          58 MRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHR   97 (262)
T ss_pred             HHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHh
Confidence            3467899999999999888889999999999999888764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.40  E-value=5.5e-07  Score=39.52  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+......++++|++++++|..++...
T Consensus        63 l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~  103 (277)
T cd05032          63 MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSR  103 (277)
T ss_pred             HHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhc
Confidence            35678999999999998889999999999999999998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.40  E-value=8.7e-07  Score=38.80  Aligned_cols=41  Identities=29%  Similarity=0.406  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++++++.+......++++|+++++++.+++...
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~   99 (266)
T cd05033          59 MGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLREN   99 (266)
T ss_pred             HHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhc
Confidence            45678999999999998888999999999999999988653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.39  E-value=1.8e-06  Score=38.26  Aligned_cols=43  Identities=19%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|++++.+.+.+...+..++++|+++++++..++...+.+++
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~   96 (279)
T cd05633          54 GDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSE   96 (279)
T ss_pred             CCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCH
Confidence            4689999999988888899999999999999998877665554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.39  E-value=5.8e-07  Score=39.96  Aligned_cols=41  Identities=29%  Similarity=0.440  Sum_probs=36.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+......++++|+++++++..++...
T Consensus        71 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          71 MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             HHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            45688999999999998889999999999999999988643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.39  E-value=4.3e-07  Score=40.12  Aligned_cols=44  Identities=20%  Similarity=0.360  Sum_probs=34.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIF   45 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~   45 (50)
                      ++.++|+|++++++.+...+..++++|+++++.+.........+
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   97 (287)
T cd07848          54 LRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGV   97 (287)
T ss_pred             HHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCC
Confidence            45678999999999999999999999999987766554433333

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.38  E-value=1e-06  Score=38.85  Aligned_cols=42  Identities=24%  Similarity=0.464  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++.+++.+......++++|++.++++..++...+
T Consensus        63 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~  104 (277)
T cd05036          63 MSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENR  104 (277)
T ss_pred             HHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhC
Confidence            456789999999998888888999999999999999987654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.38  E-value=1.1e-06  Score=38.52  Aligned_cols=45  Identities=33%  Similarity=0.570  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++++++++...  ..+++++|+++++++.+++.....++
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~  104 (265)
T cd06652          58 LKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALT  104 (265)
T ss_pred             HHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCC
Confidence            4567899999999987653  46789999999999999987665544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.38  E-value=8.6e-07  Score=40.02  Aligned_cols=40  Identities=23%  Similarity=0.458  Sum_probs=35.8

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.++|+||+.+++.+...+..+++++++.++++.++++..
T Consensus        54 ~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~   93 (328)
T cd08226          54 HFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTY   93 (328)
T ss_pred             HhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhh
Confidence            4578999999999999999999999999999999988754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.38  E-value=9.9e-07  Score=38.27  Aligned_cols=41  Identities=39%  Similarity=0.683  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++.+...+..++++|+++++++.+++...
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   93 (256)
T cd08220          53 LKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKR   93 (256)
T ss_pred             HhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHh
Confidence            45678999999999888888999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.37  E-value=2e-06  Score=38.92  Aligned_cols=42  Identities=19%  Similarity=0.252  Sum_probs=37.1

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++++.+++.+......++++|++.++++...+...+.+++
T Consensus        54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~   95 (330)
T cd05586          54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSE   95 (330)
T ss_pred             CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCH
Confidence            699999999999999999999999999999998887666654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.37  E-value=1e-06  Score=38.79  Aligned_cols=45  Identities=29%  Similarity=0.538  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|+|++.+++.+......++++|+++++.+.........++
T Consensus        54 l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~   98 (286)
T cd07847          54 LKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVP   98 (286)
T ss_pred             HHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCC
Confidence            356789999999999999999999999999888877765544444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.37  E-value=1.1e-06  Score=39.30  Aligned_cols=39  Identities=28%  Similarity=0.530  Sum_probs=34.9

Q ss_pred             cC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          4 DC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .+ +|++++++++.+...+..++++|++++++|.+++...
T Consensus        79 ~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          79 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             HhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            44 6999999999998888999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.37  E-value=8.3e-07  Score=39.60  Aligned_cols=40  Identities=30%  Similarity=0.543  Sum_probs=35.5

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|+|++++++.+......++++|++++++|..++...
T Consensus        75 ~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          75 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  115 (304)
T ss_pred             HhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            345 7999999999998888999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.37  E-value=7.8e-07  Score=39.36  Aligned_cols=41  Identities=22%  Similarity=0.392  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+...+..++++|+++++++.+++...
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  102 (288)
T cd05050          62 MAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHR  102 (288)
T ss_pred             HHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHc
Confidence            35678999999999988888899999999999999998753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.36  E-value=1.4e-06  Score=38.09  Aligned_cols=39  Identities=28%  Similarity=0.602  Sum_probs=34.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|++++++++.+...+..++++++++++++..++.
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~   94 (267)
T cd08228          56 LKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIK   94 (267)
T ss_pred             HHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHH
Confidence            456789999999999998899999999999999988775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.36  E-value=2.9e-07  Score=39.77  Aligned_cols=45  Identities=22%  Similarity=0.403  Sum_probs=38.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++++++.+......++++++++++++.+++.....++
T Consensus        47 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~   91 (250)
T cd05123          47 LSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFS   91 (250)
T ss_pred             HHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCC
Confidence            356789999999999988999999999999999999988765544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.36  E-value=8.9e-07  Score=38.34  Aligned_cols=40  Identities=28%  Similarity=0.544  Sum_probs=35.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|++++++++.+......++++++++++++.+++...
T Consensus        51 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   90 (262)
T cd00192          51 KKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKS   90 (262)
T ss_pred             hhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhc
Confidence            4567999999999998888999999999999999998864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.35  E-value=1.4e-06  Score=38.90  Aligned_cols=40  Identities=48%  Similarity=0.901  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+++.+......++++++++++++..++..
T Consensus        70 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  109 (297)
T cd06656          70 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  109 (297)
T ss_pred             HHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh
Confidence            3567899999999999999999999999999999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.35  E-value=9.9e-07  Score=39.16  Aligned_cols=41  Identities=20%  Similarity=0.391  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++++++.+...+..++++|++ ++++..++....
T Consensus        56 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~   96 (298)
T cd07841          56 LQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKS   96 (298)
T ss_pred             HhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccC
Confidence            45678999999999999989999999999 889999987654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0607|consensus

Probab=98.35  E-value=1.8e-07  Score=43.33  Aligned_cols=43  Identities=21%  Similarity=0.328  Sum_probs=39.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      .|+||+++++.|.++...|+++|-+.||++...++++..|++.
T Consensus       134 gh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~  176 (463)
T KOG0607|consen  134 GHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNER  176 (463)
T ss_pred             CCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHH
Confidence            6999999999999999999999999999999999988777653

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.35  E-value=1e-06  Score=38.39  Aligned_cols=42  Identities=31%  Similarity=0.528  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++++++.+......++++|+++++++.++++...
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~   95 (256)
T cd05039          54 MTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG   95 (256)
T ss_pred             HHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcC
Confidence            456789999999999888888999999999999999987644

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.35  E-value=1.2e-06  Score=38.06  Aligned_cols=41  Identities=34%  Similarity=0.702  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++++.+.+...+..++++|+++++++...+...
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~   93 (256)
T cd08218          53 LSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQ   93 (256)
T ss_pred             HHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhc
Confidence            45678999999999998889999999999999999888653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0033|consensus

Probab=98.34  E-value=9.5e-08  Score=42.94  Aligned_cols=40  Identities=18%  Similarity=0.277  Sum_probs=35.3

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.++||||++++..+....+.+++++.+.|+++..-+..+
T Consensus        65 ~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R  104 (355)
T KOG0033|consen   65 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR  104 (355)
T ss_pred             HhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH
Confidence            4689999999999999999999999999999998766543

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.34  E-value=2.7e-06  Score=37.69  Aligned_cols=43  Identities=19%  Similarity=0.231  Sum_probs=36.7

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|++++.+.+.+...+..++++|++++++|..++...+.+++
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~   96 (278)
T cd05606          54 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE   96 (278)
T ss_pred             CCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            4689999999999888999999999999999988876655543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.33  E-value=4.9e-07  Score=39.81  Aligned_cols=40  Identities=50%  Similarity=0.996  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+......++++|+++++++.+.+..
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (277)
T cd06642          56 LSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP   95 (277)
T ss_pred             HHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc
Confidence            4567899999999999988999999999999999888764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.33  E-value=2.2e-06  Score=37.88  Aligned_cols=40  Identities=28%  Similarity=0.837  Sum_probs=35.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+++.+......++++|+++++++...+..
T Consensus        56 l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~   95 (282)
T cd06643          56 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE   95 (282)
T ss_pred             HHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence            3467899999999999988999999999999999887754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.33  E-value=1.5e-06  Score=39.07  Aligned_cols=40  Identities=30%  Similarity=0.538  Sum_probs=35.0

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|+|++++++.+......++++|++++++|..++...
T Consensus        72 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          72 KLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             HhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhc
Confidence            345 5999999999988888899999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.33  E-value=7.6e-07  Score=39.82  Aligned_cols=41  Identities=24%  Similarity=0.458  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++.+++.+......++++++++++++..++...
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~   93 (314)
T cd08216          53 SRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTH   93 (314)
T ss_pred             HHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHh
Confidence            45678999999999999889999999999999999988753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.33  E-value=1.8e-06  Score=38.38  Aligned_cols=41  Identities=17%  Similarity=0.280  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+.+.+.+.+..++++++++++++...+...
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~   94 (285)
T cd05630          54 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM   94 (285)
T ss_pred             HHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHh
Confidence            45678999999999998889999999999999998887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.32  E-value=2.3e-06  Score=38.02  Aligned_cols=40  Identities=33%  Similarity=0.840  Sum_probs=34.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+.+.+......++++++++++++...+..
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  102 (292)
T cd06644          63 LATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE  102 (292)
T ss_pred             HHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence            3567899999999999888999999999999999877654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.32  E-value=1.4e-06  Score=38.59  Aligned_cols=44  Identities=16%  Similarity=0.299  Sum_probs=37.1

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +.+ +|++++.+++.+......++++|+++++++.+++.....++
T Consensus        59 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~  103 (290)
T cd05613          59 EHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFK  103 (290)
T ss_pred             HhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCC
Confidence            345 58999999999988889999999999999999987765554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.32  E-value=1.4e-06  Score=38.85  Aligned_cols=40  Identities=50%  Similarity=0.941  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+++.+...+..++++|+++++++..++..
T Consensus        70 l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  109 (293)
T cd06647          70 MRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE  109 (293)
T ss_pred             HhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence            4567899999999999888999999999999999998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.32  E-value=1.8e-06  Score=38.61  Aligned_cols=41  Identities=41%  Similarity=0.741  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+++.+......+++++++.++++..++...
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  110 (296)
T cd06655          70 MKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET  110 (296)
T ss_pred             HHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc
Confidence            35678999999999998889999999999999999887653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.32  E-value=1.8e-06  Score=38.32  Aligned_cols=40  Identities=18%  Similarity=0.289  Sum_probs=35.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+.+.+...+..+++++++++|++...+..
T Consensus        54 l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~   93 (285)
T cd05631          54 LEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN   93 (285)
T ss_pred             HHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHh
Confidence            4567899999999999888999999999999999887754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4717|consensus

Probab=98.32  E-value=7.9e-07  Score=43.58  Aligned_cols=41  Identities=32%  Similarity=0.451  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      |+-++||||+++|....+...+|++.|.-.+|++++++-++
T Consensus        71 MKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKH  111 (864)
T KOG4717|consen   71 MKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH  111 (864)
T ss_pred             HHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhh
Confidence            45678999999999998888999999999999999998654

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.31  E-value=5.1e-06  Score=37.57  Aligned_cols=42  Identities=24%  Similarity=0.352  Sum_probs=36.3

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++++.+++++...+..++++|++++|++...+...+.+++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~  100 (323)
T cd05616          59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKE  100 (323)
T ss_pred             CCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCH
Confidence            588899999999999999999999999999998877666554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.31  E-value=1.7e-06  Score=37.79  Aligned_cols=40  Identities=28%  Similarity=0.578  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+++.+...+..++++|+++++++..++..
T Consensus        56 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   95 (267)
T cd08224          56 LKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKH   95 (267)
T ss_pred             HHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHH
Confidence            4567899999999999988999999999999999988864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.31  E-value=2.9e-06  Score=38.38  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=35.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +|++++.+++++...+..++++|++++|+|..++...+.+++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~  100 (323)
T cd05615          59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE  100 (323)
T ss_pred             CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence            467788889889888999999999999999999887666554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.31  E-value=1.5e-06  Score=38.55  Aligned_cols=42  Identities=21%  Similarity=0.301  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++++++.+...+..+++++++.++++..++....
T Consensus        73 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05051          73 LSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHV  114 (296)
T ss_pred             HHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            456789999999999988889999999999999999987644

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.31  E-value=1.7e-06  Score=37.50  Aligned_cols=42  Identities=14%  Similarity=0.283  Sum_probs=35.9

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ..|+|++.+++.+...+..++++|++++++|.+.+.....++
T Consensus        42 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   83 (237)
T cd05576          42 HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP   83 (237)
T ss_pred             cCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence            358999999999988899999999999999999887655444

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.30  E-value=1.1e-06  Score=38.33  Aligned_cols=40  Identities=35%  Similarity=0.831  Sum_probs=35.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|+|++.+++.+......+++++++++++|.+++...
T Consensus        54 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   93 (265)
T cd06605          54 HKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEV   93 (265)
T ss_pred             HHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHc
Confidence            4578999999999998899999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.30  E-value=3e-06  Score=36.65  Aligned_cols=46  Identities=41%  Similarity=0.725  Sum_probs=38.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++.+.+.+......++++++..++++.+.+.....+++
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~   98 (254)
T cd06627          53 LKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPE   98 (254)
T ss_pred             HHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCH
Confidence            3467899999999998888999999999999999998876655443

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.30  E-value=2e-06  Score=37.32  Aligned_cols=40  Identities=50%  Similarity=1.139  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++++.+.+......++++++++++++.+++..
T Consensus        52 ~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~   91 (256)
T cd06612          52 LKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI   91 (256)
T ss_pred             HHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh
Confidence            3567899999999999999999999999999999998865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.29  E-value=1.1e-06  Score=38.35  Aligned_cols=41  Identities=24%  Similarity=0.369  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++.+++.+...+..++++|+++++++.+++...
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   95 (261)
T cd05068          55 MKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGG   95 (261)
T ss_pred             HHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhcc
Confidence            45678999999999988888999999999999999998754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0600|consensus

Probab=98.29  E-value=1.1e-06  Score=42.40  Aligned_cols=40  Identities=20%  Similarity=0.400  Sum_probs=34.0

Q ss_pred             CCccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhh
Q psy13313          1 MMKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ||+++.|+||+.+.+.....  ..+|+++||+.. ||..++..
T Consensus       169 ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~  210 (560)
T KOG0600|consen  169 ILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSS  210 (560)
T ss_pred             HHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcC
Confidence            46789999999999988776  689999999984 88887765

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.29  E-value=1.2e-06  Score=38.32  Aligned_cols=41  Identities=29%  Similarity=0.489  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.+++...
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   96 (263)
T cd05052          56 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC   96 (263)
T ss_pred             HHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhC
Confidence            45678999999999998888999999999999999988653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.28  E-value=1.1e-06  Score=38.10  Aligned_cols=41  Identities=34%  Similarity=0.766  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+......++++|+++++++.+++...
T Consensus        53 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   93 (257)
T cd08225          53 LAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQ   93 (257)
T ss_pred             HHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhc
Confidence            35678999999999998889999999999999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.27  E-value=1.7e-06  Score=39.17  Aligned_cols=40  Identities=30%  Similarity=0.540  Sum_probs=35.2

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|+|++++++.+......++++|++++++|..++...
T Consensus        72 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          72 KMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             HhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhc
Confidence            445 7999999999998888899999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.27  E-value=6.2e-07  Score=39.60  Aligned_cols=40  Identities=28%  Similarity=0.760  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+...+..++++|+++++++..++..
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   92 (286)
T cd06622          53 LHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAG   92 (286)
T ss_pred             HHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHh
Confidence            3567899999999999889999999999999999888775

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.27  E-value=3.6e-06  Score=36.94  Aligned_cols=45  Identities=36%  Similarity=0.674  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+|++.+++.+..  ....++++++++++++.+.+...+.++
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~  104 (266)
T cd06651          58 LKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALT  104 (266)
T ss_pred             HHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence            456789999999987765  357889999999999999887655544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.26  E-value=2.4e-06  Score=37.26  Aligned_cols=41  Identities=27%  Similarity=0.534  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+......+++++++.++++.+++...
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~   95 (261)
T cd05034          55 MKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSG   95 (261)
T ss_pred             HhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhcc
Confidence            45678999999999988888899999999999999988654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.24  E-value=5.7e-07  Score=39.40  Aligned_cols=45  Identities=22%  Similarity=0.450  Sum_probs=38.2

Q ss_pred             ccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.+. |+|++++++.+......+++++++.++++.+.+...+.+++
T Consensus        56 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  101 (280)
T cd05581          56 TRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDE  101 (280)
T ss_pred             HhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence            3556 99999999988888899999999999999999987655543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.24  E-value=2.6e-06  Score=38.21  Aligned_cols=41  Identities=24%  Similarity=0.521  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+......++++|++.++++.+++...
T Consensus        55 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   95 (316)
T cd05574          55 LATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQ   95 (316)
T ss_pred             HHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhC
Confidence            35678999999999998889999999999999999988753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.24  E-value=3.3e-06  Score=43.20  Aligned_cols=40  Identities=23%  Similarity=0.397  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|||++++++.+...+..++++++++++++.+++..
T Consensus        56 Ls~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s   95 (932)
T PRK13184         56 AADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKS   95 (932)
T ss_pred             HHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHH
Confidence            4567899999999999999999999999999999998864

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.24  E-value=3.1e-06  Score=37.47  Aligned_cols=41  Identities=24%  Similarity=0.461  Sum_probs=34.2

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++.+.+...  ...++++|++++++|..++...
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~  102 (284)
T cd05079          60 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRN  102 (284)
T ss_pred             HHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhc
Confidence            4567899999999887664  5688999999999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0696|consensus

Probab=98.24  E-value=3.2e-07  Score=43.87  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=38.2

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .-|++++++.++++-+.++++|||+.+|+|.-.+++.+.+.+
T Consensus       408 kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKE  449 (683)
T KOG0696|consen  408 KPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKE  449 (683)
T ss_pred             CCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCC
Confidence            357899999999999999999999999999999999888765

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.24  E-value=3.4e-06  Score=36.62  Aligned_cols=41  Identities=32%  Similarity=0.554  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+......+++++++.++++..++...
T Consensus        46 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~   86 (251)
T cd05041          46 LKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKK   86 (251)
T ss_pred             HHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhc
Confidence            35678999999999999889999999999999999988653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.24  E-value=1.9e-06  Score=37.72  Aligned_cols=40  Identities=30%  Similarity=0.643  Sum_probs=35.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+...+..++++++++++++.+++..
T Consensus        56 l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   95 (267)
T cd08229          56 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH   95 (267)
T ss_pred             HHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHH
Confidence            3567899999999999988999999999999999988763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.23  E-value=3e-06  Score=36.89  Aligned_cols=41  Identities=32%  Similarity=0.413  Sum_probs=35.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+|++.+++.+.. ...++++|+++++++...+....
T Consensus        50 l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~   90 (257)
T cd05040          50 MHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDA   90 (257)
T ss_pred             HhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcc
Confidence            456889999999998877 88999999999999999987643

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.23  E-value=4.5e-06  Score=36.07  Aligned_cols=45  Identities=36%  Similarity=0.701  Sum_probs=37.6

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++++.+.+...  ...++++|+.+++++.+++.....++
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~   99 (260)
T cd06606          53 LSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLP   99 (260)
T ss_pred             HHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCC
Confidence            3567899999999988887  78999999999999999987665443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.23  E-value=5.1e-06  Score=36.24  Aligned_cols=41  Identities=44%  Similarity=0.946  Sum_probs=36.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+......++++++++++++...++..
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~   93 (267)
T cd06610          53 MSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSS   93 (267)
T ss_pred             HHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHh
Confidence            35678999999999999899999999999999999998753

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.23  E-value=4e-06  Score=37.22  Aligned_cols=39  Identities=49%  Similarity=0.999  Sum_probs=32.0

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+||+.+++.+...  ...++++|++++++|.+++.
T Consensus        53 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   93 (287)
T cd06621          53 NKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYK   93 (287)
T ss_pred             HHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHH
Confidence            4567899999999887553  46899999999999988764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.22  E-value=8.9e-06  Score=36.81  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=35.3

Q ss_pred             cCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          4 DCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         4 ~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .+. |++++.+++++...+.+++++|++++|+|...+...+.+++
T Consensus        56 ~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~  100 (324)
T cd05587          56 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKE  100 (324)
T ss_pred             hcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence            344 45678888888888999999999999999998877665543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.22  E-value=3.1e-06  Score=36.98  Aligned_cols=45  Identities=18%  Similarity=0.222  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|++++++++.+. .+..++++++++++++.+++.....+++
T Consensus        50 l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~   94 (257)
T cd05116          50 MQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTE   94 (257)
T ss_pred             HHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCH
Confidence            35678999999998765 4567889999999999999876655443

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.22  E-value=3.6e-06  Score=36.62  Aligned_cols=41  Identities=20%  Similarity=0.442  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+......+++++++.++++.+++...
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~   93 (256)
T cd05112          53 MMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQ   93 (256)
T ss_pred             HHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhC
Confidence            45678999999999988888899999999999999888653

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.22  E-value=4.1e-06  Score=39.02  Aligned_cols=44  Identities=11%  Similarity=0.150  Sum_probs=36.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+||+++++.+......+++++++. +++..++.....++
T Consensus       137 l~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~  180 (391)
T PHA03212        137 LRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIA  180 (391)
T ss_pred             HHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCC
Confidence            567899999999999998899999999986 68888876655544

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.22  E-value=4.3e-06  Score=37.20  Aligned_cols=41  Identities=22%  Similarity=0.317  Sum_probs=34.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+|++++++.+.+....++++|++.+ ++..++...+
T Consensus        57 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~   97 (288)
T cd07871          57 LKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCG   97 (288)
T ss_pred             HHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcC
Confidence            4568899999999999888899999999984 8888876543

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.21  E-value=4.1e-06  Score=36.58  Aligned_cols=44  Identities=23%  Similarity=0.317  Sum_probs=35.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++.+++.+. .+..++++++++++++.+++.....++
T Consensus        50 l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~   93 (257)
T cd05060          50 MAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIP   93 (257)
T ss_pred             HHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCC
Confidence            45678999999998765 456789999999999999998765444

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.21  E-value=4.5e-06  Score=37.09  Aligned_cols=40  Identities=48%  Similarity=0.921  Sum_probs=35.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+++.+...+..++++++++++++.+.+..
T Consensus        70 l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  109 (285)
T cd06648          70 MRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH  109 (285)
T ss_pred             HHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence            3467899999999999888999999999999999998876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.20  E-value=2.6e-06  Score=36.92  Aligned_cols=41  Identities=32%  Similarity=0.555  Sum_probs=35.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+.|++++.+++.+...+..++++++++++++.+.+....
T Consensus        56 ~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~   96 (258)
T smart00219       56 RKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNR   96 (258)
T ss_pred             HhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhh
Confidence            45689999999999988889999999999999999887543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG4250|consensus

Probab=98.20  E-value=4.6e-07  Score=44.85  Aligned_cols=42  Identities=31%  Similarity=0.537  Sum_probs=33.1

Q ss_pred             CCccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHhhc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +|+.++|+||+.+.+.=.+..      ...++||||++|||...+++.
T Consensus        64 ilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~P  111 (732)
T KOG4250|consen   64 ILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSP  111 (732)
T ss_pred             HHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCc
Confidence            467889999999987544332      356889999999999999753

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.19  E-value=2.8e-06  Score=37.88  Aligned_cols=40  Identities=30%  Similarity=0.454  Sum_probs=34.9

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|++++++++.+...+..++++++.+++++.+++...
T Consensus        57 ~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (297)
T cd05089          57 CKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKS   97 (297)
T ss_pred             HhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhc
Confidence            345 6999999999998888899999999999999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.19  E-value=7.7e-06  Score=35.89  Aligned_cols=37  Identities=32%  Similarity=0.770  Sum_probs=33.3

Q ss_pred             cCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          4 DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      .+.|+|++.+++.+...+..++++|+++++++.+++.
T Consensus        65 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~  101 (269)
T cd08528          65 QLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFN  101 (269)
T ss_pred             cCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHH
Confidence            4689999999999999999999999999999988774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.19  E-value=4.9e-06  Score=36.47  Aligned_cols=39  Identities=23%  Similarity=0.396  Sum_probs=32.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+++.+. ....++++|+++++++.+++..
T Consensus        49 l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~   87 (257)
T cd05115          49 MHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSG   87 (257)
T ss_pred             HHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHh
Confidence            45688999999998765 4568899999999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0587|consensus

Probab=98.19  E-value=5.3e-06  Score=42.29  Aligned_cols=38  Identities=39%  Similarity=1.082  Sum_probs=32.4

Q ss_pred             CCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ..|||+..+++++.-     .+.+|++||+|.+|+..++++..
T Consensus        73 ~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~  115 (953)
T KOG0587|consen   73 SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT  115 (953)
T ss_pred             cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhh
Confidence            469999999987753     46899999999999999998754

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.19  E-value=4.7e-06  Score=36.80  Aligned_cols=40  Identities=18%  Similarity=0.273  Sum_probs=34.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+.+ ...++++|++++|++.+.+...
T Consensus        63 l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~  102 (279)
T cd05057          63 MASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNH  102 (279)
T ss_pred             HHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhc
Confidence            456789999999998876 7788999999999999988753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.18  E-value=9.9e-07  Score=38.31  Aligned_cols=44  Identities=36%  Similarity=0.668  Sum_probs=37.6

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +.+.|++++++.+.+......+++++++.++++..++.....++
T Consensus        53 ~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~   96 (260)
T PF00069_consen   53 RRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLS   96 (260)
T ss_dssp             HHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc
Confidence            45689999999999999999999999999999999988555443

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.18  E-value=2.1e-06  Score=39.19  Aligned_cols=36  Identities=22%  Similarity=0.546  Sum_probs=31.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD   37 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~   37 (50)
                      ++.++|+||+.+++.+...+.+++++|++.++++..
T Consensus       126 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  161 (353)
T PLN00034        126 LRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG  161 (353)
T ss_pred             HHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccc
Confidence            456789999999999998999999999999988754

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.18  E-value=9.7e-07  Score=38.92  Aligned_cols=44  Identities=20%  Similarity=0.431  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIF   45 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~   45 (50)
                      ++.+.|++++++++.+......++++|++.++++.........+
T Consensus        54 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~   97 (286)
T cd07846          54 LKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGL   97 (286)
T ss_pred             HHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCC
Confidence            35678999999999999889999999999988888776544333

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.17  E-value=7.1e-06  Score=35.99  Aligned_cols=45  Identities=36%  Similarity=0.682  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|++++.+++.+.+.  ...++++|+++++++...+...+.++
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~  104 (264)
T cd06653          58 LKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALT  104 (264)
T ss_pred             HHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCC
Confidence            4567899999999987654  45789999999999999887655544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.17  E-value=4.7e-06  Score=36.79  Aligned_cols=44  Identities=20%  Similarity=0.388  Sum_probs=35.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIF   45 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~   45 (50)
                      ++.+.|++++++.+.+...+..++++|+++++.+.........+
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~   97 (288)
T cd07833          54 LRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGL   97 (288)
T ss_pred             HHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCC
Confidence            34678999999999999999999999999987776665544333

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.17  E-value=4.7e-06  Score=37.29  Aligned_cols=39  Identities=26%  Similarity=0.330  Sum_probs=33.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+++.+.+....++++|++. +++...+..
T Consensus        57 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~   95 (303)
T cd07869          57 LKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDK   95 (303)
T ss_pred             HhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHh
Confidence            456789999999999999999999999996 577776654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.16  E-value=4e-06  Score=43.25  Aligned_cols=40  Identities=38%  Similarity=0.784  Sum_probs=33.8

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++|+.+++.+..  ...+++++|++++++|..++..
T Consensus        66 L~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k  107 (1021)
T PTZ00266         66 MRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQK  107 (1021)
T ss_pred             HHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHH
Confidence            456889999999998754  3578999999999999998864

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.16  E-value=6.3e-06  Score=36.47  Aligned_cols=37  Identities=32%  Similarity=0.809  Sum_probs=32.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~   38 (50)
                      ++.+.|++++.+++.+...+..++++|+++++++...
T Consensus        53 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (279)
T cd06619          53 LYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY   89 (279)
T ss_pred             HHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh
Confidence            3567899999999999999999999999999887544

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.16  E-value=6.1e-06  Score=36.68  Aligned_cols=41  Identities=17%  Similarity=0.274  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+.+.+...+..+++++++.++++...+...
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   94 (285)
T cd05632          54 LEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNM   94 (285)
T ss_pred             HHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHh
Confidence            45678999999999998889999999999999998877543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.16  E-value=4.9e-06  Score=37.20  Aligned_cols=40  Identities=45%  Similarity=0.926  Sum_probs=35.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+...+..++++|+++++++.+.+..
T Consensus        71 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  110 (292)
T cd06657          71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH  110 (292)
T ss_pred             HHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc
Confidence            3567899999999999999999999999999999887653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.14  E-value=3.3e-06  Score=37.42  Aligned_cols=44  Identities=16%  Similarity=0.303  Sum_probs=36.4

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ..+ +|++++.+++.+......++++|+++++++...+.....++
T Consensus        59 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~  103 (288)
T cd05583          59 EAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFT  103 (288)
T ss_pred             HhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcC
Confidence            345 58999999998988889999999999999999887655443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0201|consensus

Probab=98.14  E-value=5.7e-08  Score=45.79  Aligned_cols=46  Identities=50%  Similarity=1.029  Sum_probs=40.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.++.+++|.++++++.....+|++||++.+|++.+.++..+.+++
T Consensus        65 Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E  110 (467)
T KOG0201|consen   65 LSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDE  110 (467)
T ss_pred             HHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCcc
Confidence            4567889999999999999999999999999999999987666544

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.13  E-value=6.8e-06  Score=36.34  Aligned_cols=41  Identities=34%  Similarity=0.557  Sum_probs=33.2

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++.+.+..  ....++++|++++++|.+++...
T Consensus        59 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  101 (284)
T cd05081          59 LKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH  101 (284)
T ss_pred             HHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhc
Confidence            456789999999887643  34688999999999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.13  E-value=4e-06  Score=37.51  Aligned_cols=40  Identities=43%  Similarity=0.893  Sum_probs=35.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+...+..++++|+++++++...+..
T Consensus        72 l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~  111 (297)
T cd06659          72 MRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ  111 (297)
T ss_pred             HHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh
Confidence            3467899999999999999999999999999999887754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG4279|consensus

Probab=98.13  E-value=1e-06  Score=44.56  Aligned_cols=40  Identities=33%  Similarity=0.491  Sum_probs=36.3

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|.||+++.|++...+++-++||-.+||+|..+++..
T Consensus       627 ~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrsk  666 (1226)
T KOG4279|consen  627 STLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSK  666 (1226)
T ss_pred             HHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhc
Confidence            3578999999999999999999999999999999999864

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.12  E-value=1.1e-05  Score=35.76  Aligned_cols=40  Identities=28%  Similarity=0.384  Sum_probs=34.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++.+...+..++++|++.+ ++..++...
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~   96 (291)
T cd07844          57 LKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDC   96 (291)
T ss_pred             HhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhC
Confidence            4567899999999999999999999999984 888877653

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.11  E-value=8.1e-06  Score=36.98  Aligned_cols=44  Identities=20%  Similarity=0.364  Sum_probs=36.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++.+++.+...+..++++|++. +++.+.+.....++
T Consensus        74 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~  117 (335)
T PTZ00024         74 MNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLT  117 (335)
T ss_pred             HHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCC
Confidence            456789999999999998899999999997 68888887654444

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.11  E-value=7.6e-06  Score=36.11  Aligned_cols=40  Identities=15%  Similarity=0.429  Sum_probs=34.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+......++++|++ ++++..++...
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~   92 (286)
T cd07832          53 LQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDE   92 (286)
T ss_pred             HHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhc
Confidence            34678999999999999889999999999 89999988643

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.10  E-value=1.2e-05  Score=35.58  Aligned_cols=40  Identities=35%  Similarity=0.483  Sum_probs=33.0

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++.+.+..  ....++++|+++++++.+++..
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  101 (283)
T cd05080          60 LKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK  101 (283)
T ss_pred             HHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH
Confidence            456789999999987654  3468899999999999998865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.10  E-value=8.8e-06  Score=35.64  Aligned_cols=40  Identities=23%  Similarity=0.438  Sum_probs=34.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++.+.. ...++++++++++++.+++...
T Consensus        55 l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~   94 (260)
T cd05073          55 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSD   94 (260)
T ss_pred             HHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhC
Confidence            456889999999988766 6788999999999999998763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.09  E-value=1.2e-05  Score=35.18  Aligned_cols=41  Identities=24%  Similarity=0.472  Sum_probs=33.4

Q ss_pred             CccCCCCeeceeceEEE-eCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYL-RKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+++.+. .....+++++++.++++.+++...
T Consensus        50 l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   91 (262)
T cd05058          50 MKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSE   91 (262)
T ss_pred             HccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhc
Confidence            45678999999998665 345678999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG4645|consensus

Probab=98.09  E-value=9.6e-08  Score=49.76  Aligned_cols=46  Identities=35%  Similarity=0.727  Sum_probs=38.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +..++|||+++++|.=...+.++++||||.+|+|.+.++..+..++
T Consensus      1288 lE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE 1333 (1509)
T KOG4645|consen 1288 LEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDE 1333 (1509)
T ss_pred             HHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhh
Confidence            3467999999999987777889999999999999999986655443

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.09  E-value=1e-06  Score=38.44  Aligned_cols=40  Identities=28%  Similarity=0.561  Sum_probs=34.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+......++++|+++++++...+..
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~   95 (260)
T cd08222          56 LSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEE   95 (260)
T ss_pred             HHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHH
Confidence            3467899999999988888889999999999999887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.09  E-value=7.7e-06  Score=36.02  Aligned_cols=42  Identities=31%  Similarity=0.538  Sum_probs=34.5

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++.+++++..  ....++++|+++++++.+++....
T Consensus        60 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~  103 (284)
T cd05038          60 LRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR  103 (284)
T ss_pred             HHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc
Confidence            356789999999987766  457899999999999999987543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.08  E-value=2.8e-06  Score=37.91  Aligned_cols=40  Identities=45%  Similarity=0.916  Sum_probs=34.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++.+++.+...+..++++|+++++++..++..
T Consensus        73 l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  112 (292)
T cd06658          73 MRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH  112 (292)
T ss_pred             HHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc
Confidence            3467899999999999888999999999999999888754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.08  E-value=9.5e-06  Score=35.74  Aligned_cols=36  Identities=47%  Similarity=0.971  Sum_probs=32.7

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .|++++.+++.+......++++|++++++|.++++.
T Consensus        60 ~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   95 (277)
T cd06917          60 QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA   95 (277)
T ss_pred             CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc
Confidence            499999999999888899999999999999988865

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.08  E-value=9.3e-06  Score=35.15  Aligned_cols=41  Identities=44%  Similarity=0.704  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+.+.+......++++++++++++...+...
T Consensus        53 l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   93 (258)
T cd08215          53 LKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQ   93 (258)
T ss_pred             HHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHh
Confidence            34678999999999988889999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.07  E-value=1.2e-05  Score=35.92  Aligned_cols=39  Identities=26%  Similarity=0.382  Sum_probs=33.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+||+++++.+......++++|++. +++...+..
T Consensus        58 l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~   96 (301)
T cd07873          58 LKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDD   96 (301)
T ss_pred             HHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHh
Confidence            456789999999999999999999999997 588777754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.06  E-value=1.8e-05  Score=34.08  Aligned_cols=41  Identities=61%  Similarity=1.301  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+.+.+......++++++++++++.+.+...
T Consensus        51 l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~   91 (253)
T cd05122          51 LKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKST   91 (253)
T ss_pred             HHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhc
Confidence            34678999999999998889999999999999999988764

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.05  E-value=1.6e-05  Score=35.11  Aligned_cols=39  Identities=18%  Similarity=0.465  Sum_probs=33.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+..++..+++++++. +++..++..
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~   91 (285)
T cd07861          53 LKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDS   91 (285)
T ss_pred             HHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhc
Confidence            356789999999999999999999999997 578777754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.05  E-value=1.2e-05  Score=35.55  Aligned_cols=40  Identities=30%  Similarity=0.438  Sum_probs=33.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+...+..++++|++++ ++.+++...
T Consensus        52 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~   91 (284)
T cd07836          52 MKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTH   91 (284)
T ss_pred             HHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhc
Confidence            4567899999999999999999999999984 788877643

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.05  E-value=1.2e-05  Score=37.43  Aligned_cols=45  Identities=22%  Similarity=0.265  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+......+++++++. +++..++...+.+++
T Consensus       140 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~  184 (392)
T PHA03207        140 LKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPL  184 (392)
T ss_pred             HHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCH
Confidence            467899999999999998899999999986 688888765555543

>KOG0579|consensus

Probab=98.03  E-value=1.9e-06  Score=43.27  Aligned_cols=41  Identities=34%  Similarity=0.895  Sum_probs=35.3

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      |+..+.||+|+.+++.|...+.+|++.++|+||-....+-.
T Consensus        82 ILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlE  122 (1187)
T KOG0579|consen   82 ILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLE  122 (1187)
T ss_pred             hhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHH
Confidence            46788999999999988888999999999999988776643

>KOG0585|consensus

Probab=98.03  E-value=4e-06  Score=40.56  Aligned_cols=36  Identities=28%  Similarity=0.640  Sum_probs=29.8

Q ss_pred             CCccCCCCeeceeceEEEeC--CEEEEEEeccCCCChH
Q psy13313          1 MMKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQ   36 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~   36 (50)
                      +|+.+.|+|+++++....++  +.+|++.||+..|.+.
T Consensus       161 ilKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~  198 (576)
T KOG0585|consen  161 ILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVK  198 (576)
T ss_pred             HHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccc
Confidence            47889999999999977654  5799999999887653

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.03  E-value=7.9e-06  Score=35.91  Aligned_cols=40  Identities=25%  Similarity=0.497  Sum_probs=33.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+.. ...++++|+++++++.+++...
T Consensus        61 l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~  100 (270)
T cd05056          61 MRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVN  100 (270)
T ss_pred             HHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhC
Confidence            356789999999987765 5577999999999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.00  E-value=1.6e-05  Score=35.96  Aligned_cols=45  Identities=11%  Similarity=0.249  Sum_probs=33.7

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+...     ..+++++|++. +++...+.....+++
T Consensus        53 l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~  102 (338)
T cd07859          53 LRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTP  102 (338)
T ss_pred             HHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCCH
Confidence            4567899999998876543     24799999996 688888876555543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.00  E-value=2.2e-05  Score=34.72  Aligned_cols=39  Identities=21%  Similarity=0.453  Sum_probs=34.7

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ..+.|++++++++.+......+++++++.++++..++..
T Consensus        63 ~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~  101 (283)
T cd05091          63 SRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVM  101 (283)
T ss_pred             hcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHh
Confidence            467899999999999888889999999999999998853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.00  E-value=2e-05  Score=34.43  Aligned_cols=42  Identities=31%  Similarity=0.532  Sum_probs=34.0

Q ss_pred             CccCCCCeeceeceEEE-eCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYL-RKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|++++++++.+. .....++++|+++++++.++++...
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~   95 (256)
T cd05082          53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG   95 (256)
T ss_pred             HHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcC
Confidence            45678999999998654 4567899999999999999887543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0659|consensus

Probab=97.99  E-value=3.9e-06  Score=38.10  Aligned_cols=42  Identities=24%  Similarity=0.405  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      ++.++|+||+.+.+.+.....+.++.|++++ +|...++....
T Consensus        55 Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~i   96 (318)
T KOG0659|consen   55 LQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKNI   96 (318)
T ss_pred             HHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhccccc
Confidence            5678999999999999999999999999984 88888876543

>KOG1989|consensus

Probab=97.99  E-value=2.7e-06  Score=42.58  Aligned_cols=41  Identities=41%  Similarity=0.643  Sum_probs=31.3

Q ss_pred             CccCC-CCeeceeceE-EEe------CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCK-HHNIIAYYGS-YLR------KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~-~~~------~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      |+.|. |+||+.++++ ...      ...+.++||||.+|.|.++++.+
T Consensus        88 MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~R  136 (738)
T KOG1989|consen   88 MKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTR  136 (738)
T ss_pred             HHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHH
Confidence            56674 9999999983 322      13477999999999999999743

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=97.98  E-value=2.7e-05  Score=35.00  Aligned_cols=40  Identities=25%  Similarity=0.358  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++.+++.+...+..++++|++.+ ++...+...
T Consensus        58 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~   97 (309)
T cd07872          58 LKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDC   97 (309)
T ss_pred             HHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhc
Confidence            4567899999999999999999999999984 777776544

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=97.98  E-value=5e-06  Score=36.09  Aligned_cols=40  Identities=35%  Similarity=0.561  Sum_probs=35.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+++.+......++++++++++++..++..
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~   92 (256)
T cd08530          53 LASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISK   92 (256)
T ss_pred             HHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHH
Confidence            3567899999999988888999999999999999988765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0200|consensus

Probab=97.97  E-value=7.1e-06  Score=40.30  Aligned_cols=42  Identities=26%  Similarity=0.550  Sum_probs=37.1

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      |+.+ .|+|++.+.|++...+..+++.|++..|++..+++..+
T Consensus       355 m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  355 LKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             HHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhcc
Confidence            3444 59999999999988899999999999999999998765

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=97.96  E-value=1.3e-05  Score=35.45  Aligned_cols=38  Identities=39%  Similarity=0.975  Sum_probs=30.6

Q ss_pred             ccC-CCCeeceeceEEE-----eCCEEEEEEeccCCCChHHHHh
Q psy13313          3 KDC-KHHNIIAYYGSYL-----RKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~-----~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      +.+ .|+|++++++.+.     ..+..++++|++++++|...+.
T Consensus        69 ~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  112 (286)
T cd06638          69 KALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVK  112 (286)
T ss_pred             HHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHH
Confidence            345 6999999998763     3456899999999999988765

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG1151|consensus

Probab=97.94  E-value=1.6e-05  Score=38.76  Aligned_cols=45  Identities=24%  Similarity=0.493  Sum_probs=37.8

Q ss_pred             ccCCCCeeceeceEEE-eCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCKHHNIIAYYGSYL-RKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.+.||-|+.+++++. +.+.++-+.|||+|.+|.-+++.+..+++
T Consensus       522 KeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSE  567 (775)
T KOG1151|consen  522 KELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSE  567 (775)
T ss_pred             hccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhH
Confidence            5688999999999875 44678899999999999999988766554

>KOG0614|consensus

Probab=97.93  E-value=2.5e-07  Score=44.96  Aligned_cols=47  Identities=26%  Similarity=0.493  Sum_probs=42.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCCc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL   48 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~   48 (50)
                      |..+.+++|++++..|.++.++|+.+|-|-||.++..++.++.|+..
T Consensus       474 m~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~  520 (732)
T KOG0614|consen  474 MMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDY  520 (732)
T ss_pred             HHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccc
Confidence            44567899999999999999999999999999999999999988764

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=97.93  E-value=4e-05  Score=34.04  Aligned_cols=39  Identities=21%  Similarity=0.170  Sum_probs=32.0

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|+|++.+++.+. ....+++++++++|++.+++...
T Consensus        64 ~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~  102 (279)
T cd05111          64 GSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQH  102 (279)
T ss_pred             hcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhc
Confidence            5678999999998765 45577889999999999998753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0577|consensus

Probab=97.92  E-value=5.8e-07  Score=44.55  Aligned_cols=40  Identities=40%  Similarity=0.853  Sum_probs=33.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|||++.+.|+|...-..|++||||- |+..+++.-+
T Consensus        80 L~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVh  119 (948)
T KOG0577|consen   80 LRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVH  119 (948)
T ss_pred             HHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHH
Confidence            457899999999999999999999999998 5777776543

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.92  E-value=4.9e-05  Score=33.87  Aligned_cols=41  Identities=20%  Similarity=0.362  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+|++++++++......++++|+++ +++...+....
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~   95 (294)
T PLN00009         55 LKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSP   95 (294)
T ss_pred             HHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCC
Confidence            456789999999999999999999999996 57777765433

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=97.92  E-value=2.9e-05  Score=33.91  Aligned_cols=41  Identities=29%  Similarity=0.506  Sum_probs=33.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|++++++++.+.. +..++++|+++++++.+++....
T Consensus        53 l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~   93 (254)
T cd05083          53 MTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRG   93 (254)
T ss_pred             HHhCCCCCcCeEEEEEcC-CCcEEEEECCCCCCHHHHHHhcC
Confidence            456789999999987765 45789999999999999987543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=97.91  E-value=4e-05  Score=34.63  Aligned_cols=39  Identities=44%  Similarity=0.870  Sum_probs=32.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+++.+......++++|++++ ++.+.+..
T Consensus        79 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~  117 (317)
T cd06635          79 LQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEV  117 (317)
T ss_pred             HHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHH
Confidence            3567899999999999998999999999974 66666543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=97.91  E-value=3.9e-05  Score=34.67  Aligned_cols=39  Identities=41%  Similarity=0.870  Sum_probs=32.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++.+++.+......++++|++. +++...+..
T Consensus        75 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~  113 (313)
T cd06633          75 LQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEV  113 (313)
T ss_pred             HHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHh
Confidence            356789999999999999999999999996 466666643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=97.90  E-value=3.5e-05  Score=33.74  Aligned_cols=40  Identities=30%  Similarity=0.541  Sum_probs=32.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|++++.+++.+ ..+..+++++++.++++.+++...
T Consensus        55 l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~   94 (260)
T cd05067          55 MKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTP   94 (260)
T ss_pred             HHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhc
Confidence            4567899999998865 456789999999999999988653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.88  E-value=3.5e-05  Score=33.77  Aligned_cols=40  Identities=28%  Similarity=0.559  Sum_probs=32.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+. ....+++++++.++++.+++...
T Consensus        55 l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~   94 (260)
T cd05069          55 MKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEG   94 (260)
T ss_pred             HHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhC
Confidence            45678999999988664 45678999999999999988753

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=97.87  E-value=2.9e-05  Score=33.78  Aligned_cols=40  Identities=38%  Similarity=0.870  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+..  ....++++|+++++++..++..
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~   94 (265)
T cd08217          53 LRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQK   94 (265)
T ss_pred             HHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHH
Confidence            456789999999887653  3568899999999999988865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=97.87  E-value=1.6e-05  Score=36.32  Aligned_cols=40  Identities=20%  Similarity=0.441  Sum_probs=32.3

Q ss_pred             ccC-CCCeeceeceEEEeC-CEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRK-DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ +|+|++.+++.+... ..+++++|++++|+|.+++...
T Consensus        65 ~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~  106 (343)
T cd05103          65 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSK  106 (343)
T ss_pred             HhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhc
Confidence            445 689999999877554 4678999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.86  E-value=2.5e-05  Score=34.36  Aligned_cols=40  Identities=28%  Similarity=0.528  Sum_probs=32.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++.+++.+. ....++++++++++++.+++...
T Consensus        55 l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~   94 (262)
T cd05071          55 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGE   94 (262)
T ss_pred             HHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhc
Confidence            34678999999988664 45678999999999999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.86  E-value=3.1e-05  Score=35.65  Aligned_cols=39  Identities=8%  Similarity=0.168  Sum_probs=33.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+......+++++++. +++..++..
T Consensus       111 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~  149 (357)
T PHA03209        111 LQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTK  149 (357)
T ss_pred             HHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHh
Confidence            467899999999999999999999999986 577777654

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=97.84  E-value=2.4e-05  Score=35.13  Aligned_cols=38  Identities=45%  Similarity=0.917  Sum_probs=31.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+|++++.+.+......++++|++. |++...+.
T Consensus        69 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~  106 (307)
T cd06607          69 LQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILE  106 (307)
T ss_pred             HHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHH
Confidence            456789999999999999999999999987 56666554

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.84  E-value=4.7e-05  Score=33.87  Aligned_cols=38  Identities=26%  Similarity=0.310  Sum_probs=31.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+|++.+++.+......++++|++. +++...+.
T Consensus        57 l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~   94 (291)
T cd07870          57 LKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMI   94 (291)
T ss_pred             HHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHH
Confidence            356789999999999988889999999996 56666554

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.83  E-value=3.9e-05  Score=33.62  Aligned_cols=39  Identities=28%  Similarity=0.574  Sum_probs=32.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++.+++.+. ....++++++++++++.+++..
T Consensus        55 l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~   93 (260)
T cd05070          55 MKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKD   93 (260)
T ss_pred             HHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHh
Confidence            45688999999988764 4568899999999999998865

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0199|consensus

Probab=97.83  E-value=3.3e-06  Score=42.65  Aligned_cols=39  Identities=28%  Similarity=0.390  Sum_probs=34.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      |..+.|++++++||.+.+ ..+.+++|+++.|+|.+.+++
T Consensus       165 M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrk  203 (1039)
T KOG0199|consen  165 MLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRK  203 (1039)
T ss_pred             HHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhh
Confidence            567899999999998876 668899999999999999986

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=97.83  E-value=4.3e-05  Score=33.80  Aligned_cols=41  Identities=15%  Similarity=0.280  Sum_probs=33.5

Q ss_pred             CccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+.. ....++++++++++++..++...
T Consensus        62 l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~  103 (280)
T cd05043          62 LYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQC  103 (280)
T ss_pred             HHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhc
Confidence            456799999999987655 46788899999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.83  E-value=4.2e-05  Score=33.52  Aligned_cols=38  Identities=42%  Similarity=1.065  Sum_probs=31.3

Q ss_pred             cC-CCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHhh
Q psy13313          4 DC-KHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .+ .|+|++++++.+....      ..+++++++.++++.+.+..
T Consensus        58 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  102 (275)
T cd06608          58 KYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKG  102 (275)
T ss_pred             HhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHH
Confidence            44 6999999999886544      48999999999999888764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=97.82  E-value=4.1e-05  Score=33.37  Aligned_cols=40  Identities=35%  Similarity=0.635  Sum_probs=32.6

Q ss_pred             CccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++.+.+.+.. ...+++++|+++++++.+.+..
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~   93 (257)
T cd08223          53 LSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE   93 (257)
T ss_pred             HHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHH
Confidence            356789999999887754 4468899999999999988865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=97.82  E-value=2.9e-05  Score=35.03  Aligned_cols=40  Identities=15%  Similarity=0.172  Sum_probs=33.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+++.+... ..+++++++++|++.+.+...
T Consensus        63 l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~  102 (316)
T cd05108          63 MASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREH  102 (316)
T ss_pred             HHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhc
Confidence            4567899999999988764 467889999999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=97.81  E-value=3.6e-05  Score=33.77  Aligned_cols=40  Identities=23%  Similarity=0.406  Sum_probs=31.8

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+....      ..++++++++++++...+..
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~  100 (273)
T cd05035          55 MKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLY  100 (273)
T ss_pred             HHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHH
Confidence            35678999999998765543      37899999999999988754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=97.81  E-value=5.9e-05  Score=33.61  Aligned_cols=40  Identities=25%  Similarity=0.459  Sum_probs=32.7

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+.+++...  ...++++|++. +++...+...
T Consensus        58 l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~   99 (293)
T cd07843          58 LLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETM   99 (293)
T ss_pred             HHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhc
Confidence            3467899999999988777  78999999997 4888877653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=97.81  E-value=5.9e-05  Score=33.58  Aligned_cols=35  Identities=31%  Similarity=0.989  Sum_probs=29.7

Q ss_pred             CCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHh
Q psy13313          6 KHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~   40 (50)
                      .|+|++++++.+...     ...++++|+++++++.++++
T Consensus        77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~  116 (291)
T cd06639          77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVK  116 (291)
T ss_pred             CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHH
Confidence            799999999987653     35899999999999998875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=97.79  E-value=9.5e-05  Score=32.53  Aligned_cols=37  Identities=46%  Similarity=1.145  Sum_probs=31.1

Q ss_pred             CCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .|+|++++.+.+...      ...++++|+++++++..++...
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~  103 (272)
T cd06637          61 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT  103 (272)
T ss_pred             CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhc
Confidence            699999999987652      4688999999999999988753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=97.77  E-value=1.4e-05  Score=35.36  Aligned_cols=39  Identities=31%  Similarity=0.650  Sum_probs=32.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+......++++|++. +++...+..
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~   91 (284)
T cd07839          53 LKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDS   91 (284)
T ss_pred             HHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHh
Confidence            356789999999999998899999999997 477776654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0661|consensus

Probab=97.76  E-value=7.7e-06  Score=39.50  Aligned_cols=45  Identities=20%  Similarity=0.320  Sum_probs=35.7

Q ss_pred             CccCC-CCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhhcCC-CCC
Q psy13313          2 MKDCK-HHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYKI-FPL   47 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~~-~~~   47 (50)
                      +++++ |+||+.+.+.+.+.+ .+++++|++.. .|..+++.++. |++
T Consensus        62 L~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse  109 (538)
T KOG0661|consen   62 LRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSE  109 (538)
T ss_pred             HHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCH
Confidence            35676 999999999888877 89999999974 88888876533 443

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=97.75  E-value=3.4e-05  Score=35.60  Aligned_cols=44  Identities=14%  Similarity=0.217  Sum_probs=34.0

Q ss_pred             CccCCCCeeceeceEEEeCC-----EEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+|++.+++.+....     ..+++++++. +++...+.....++
T Consensus        53 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~  101 (372)
T cd07853          53 LCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLS  101 (372)
T ss_pred             HHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCC
Confidence            45678999999999887766     7899999987 57777776555444

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=97.74  E-value=2.9e-05  Score=34.36  Aligned_cols=39  Identities=21%  Similarity=0.445  Sum_probs=32.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+......++++|++. +++..++..
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~   91 (284)
T cd07860          53 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDA   91 (284)
T ss_pred             HHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHh
Confidence            456789999999999988889999999996 578777754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG1152|consensus

Probab=97.73  E-value=2.2e-05  Score=39.06  Aligned_cols=46  Identities=17%  Similarity=0.180  Sum_probs=37.6

Q ss_pred             CccCC---CCeeceeceEEEeCCEEEEEEecc-CCCChHHHHhhcCCCCC
Q psy13313          2 MKDCK---HHNIIAYYGSYLRKDKLWICMEYC-GGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~---h~~i~~~~~~~~~~~~~~l~~~~~-~~~~l~~~~~~~~~~~~   47 (50)
                      |..++   |+||+++.+.|.+.++.++.+|.. ++-+|++++..+..+.+
T Consensus       620 la~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E  669 (772)
T KOG1152|consen  620 LATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDE  669 (772)
T ss_pred             HHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccch
Confidence            44454   999999999999999999999975 45799999987766554

>KOG0663|consensus

Probab=97.71  E-value=2.5e-05  Score=36.69  Aligned_cols=41  Identities=29%  Similarity=0.507  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +..++|+||+.+...+..+  +.++++|+|+. .+|..++...+
T Consensus       129 Ll~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~  171 (419)
T KOG0663|consen  129 LLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMK  171 (419)
T ss_pred             HHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhcc
Confidence            4567899999998877654  57999999998 48888887644

>KOG2052|consensus

Probab=97.70  E-value=4.3e-05  Score=36.88  Aligned_cols=39  Identities=26%  Similarity=0.555  Sum_probs=32.4

Q ss_pred             cCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          4 DCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .++|.||+.++++...+.    .+|++.+|-+.|||++++++.
T Consensus       261 mLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~  303 (513)
T KOG2052|consen  261 MLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN  303 (513)
T ss_pred             HhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc
Confidence            368999999988765442    589999999999999999863

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=97.70  E-value=0.00011  Score=33.18  Aligned_cols=38  Identities=42%  Similarity=0.904  Sum_probs=31.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|++++++.+++......++++|++. +++...+.
T Consensus        69 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  106 (308)
T cd06634          69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE  106 (308)
T ss_pred             HHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHH
Confidence            456789999999999988889999999997 57766654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.70  E-value=0.00011  Score=35.31  Aligned_cols=39  Identities=8%  Similarity=0.101  Sum_probs=33.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+.+++.+......++++++.. +++..++..
T Consensus       214 L~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~  252 (461)
T PHA03211        214 LRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGA  252 (461)
T ss_pred             HHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHh
Confidence            467899999999999888889999999885 688777754

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.68  E-value=7.4e-05  Score=31.99  Aligned_cols=41  Identities=41%  Similarity=0.790  Sum_probs=35.5

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.++|++++++.+.+......++++|+.+++++..++....
T Consensus        42 ~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~   82 (244)
T smart00220       42 KKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG   82 (244)
T ss_pred             HhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc
Confidence            45689999999999888889999999999999999887644

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.67  E-value=6.2e-05  Score=33.32  Aligned_cols=41  Identities=20%  Similarity=0.376  Sum_probs=34.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|++++++++.+...+..++++++++ +++..++....
T Consensus        52 l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~   92 (283)
T cd07835          52 LKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSP   92 (283)
T ss_pred             HHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCC
Confidence            345789999999999988899999999985 68888876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=97.65  E-value=0.00012  Score=32.80  Aligned_cols=38  Identities=18%  Similarity=0.522  Sum_probs=30.9

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|++++++++.+...  ...++++|++.+ ++...+.
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~   95 (316)
T cd07842          56 LRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIK   95 (316)
T ss_pred             HHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHH
Confidence            3567899999999999887  789999999874 6666554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=97.64  E-value=7.3e-05  Score=33.60  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=32.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+++.+... ...++++++++|++.+.+...
T Consensus        63 ~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~  102 (303)
T cd05110          63 MASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEH  102 (303)
T ss_pred             HHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhc
Confidence            3567899999999987654 466889999999999988754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0593|consensus

Probab=97.63  E-value=4.8e-06  Score=38.57  Aligned_cols=39  Identities=31%  Similarity=0.610  Sum_probs=33.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++++.|+|++.+...|.....+++++||+...-|.++-+
T Consensus        55 LKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~   93 (396)
T KOG0593|consen   55 LKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELER   93 (396)
T ss_pred             HHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHh
Confidence            567899999999999999999999999998766655544

>PRK10345 hypothetical protein; Provisional

Probab=97.60  E-value=0.00034  Score=30.64  Aligned_cols=37  Identities=14%  Similarity=0.262  Sum_probs=29.5

Q ss_pred             CCCeeceeceEEEeCC---EEE-EEEec--cCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLRKD---KLW-ICMEY--CGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~---~~~-l~~~~--~~~~~l~~~~~~~   42 (50)
                      .|+||+.+++.+.++.   .++ +++++  +.+++|.+++++.
T Consensus        59 ~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~  101 (210)
T PRK10345         59 DWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC  101 (210)
T ss_pred             CCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc
Confidence            6899999999998873   434 67898  5578999999753

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=97.60  E-value=4.2e-05  Score=33.81  Aligned_cols=39  Identities=26%  Similarity=0.488  Sum_probs=33.0

Q ss_pred             cCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+. |++++++++.+...+..++++|++ ++++.+.+....
T Consensus        53 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~   92 (283)
T cd07830          53 KLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRK   92 (283)
T ss_pred             hccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcc
Confidence            456 999999999988889999999999 678888876543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=97.60  E-value=0.00015  Score=32.07  Aligned_cols=38  Identities=16%  Similarity=0.278  Sum_probs=30.6

Q ss_pred             ccC-CCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDC-KHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+ .|+|++.+++.+.+.  +..++++|++. +++...+..
T Consensus        52 ~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~   92 (282)
T cd07831          52 RRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKG   92 (282)
T ss_pred             hhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHh
Confidence            344 499999999998877  78999999997 477777664

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0195|consensus

Probab=97.59  E-value=3.3e-05  Score=35.67  Aligned_cols=40  Identities=28%  Similarity=0.349  Sum_probs=35.3

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +-..||||+.+.+.+..+..+.++.+|++.|+|+..+...
T Consensus       242 rifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~  281 (448)
T KOG0195|consen  242 RIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ  281 (448)
T ss_pred             eeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC
Confidence            4457999999999999999999999999999999988653

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=97.57  E-value=0.00014  Score=32.17  Aligned_cols=38  Identities=29%  Similarity=0.751  Sum_probs=31.5

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +...|+|++++++.+......++++|+++ +++...+..
T Consensus        55 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~   92 (283)
T cd06617          55 RSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKK   92 (283)
T ss_pred             HHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHH
Confidence            34679999999999988889999999997 677776653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.56  E-value=0.00024  Score=30.25  Aligned_cols=41  Identities=39%  Similarity=0.745  Sum_probs=35.1

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+.|++++.+++.+......++++++++++++...+....
T Consensus        52 ~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~   92 (225)
T smart00221       52 KKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKG   92 (225)
T ss_pred             HhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcc
Confidence            45679999999998888888999999999989999887644

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=97.54  E-value=0.00016  Score=31.92  Aligned_cols=40  Identities=18%  Similarity=0.365  Sum_probs=32.7

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+...  ...++++++++ +++...+...
T Consensus        52 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~   93 (287)
T cd07840          52 LQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSP   93 (287)
T ss_pred             HHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhcc
Confidence            3467899999999988877  78999999997 4888777654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0986|consensus

Probab=97.52  E-value=3.3e-05  Score=37.53  Aligned_cols=42  Identities=17%  Similarity=0.222  Sum_probs=37.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +..++.++|+++-.++.+.+.+++++..+.||+|.-++-+.+
T Consensus       239 L~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g  280 (591)
T KOG0986|consen  239 LEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHG  280 (591)
T ss_pred             HHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccC
Confidence            456788999999989999999999999999999988887766

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=97.50  E-value=0.00019  Score=32.92  Aligned_cols=40  Identities=23%  Similarity=0.459  Sum_probs=32.2

Q ss_pred             ccC-CCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|+|++++++.+.. ...+++++++++++++...+...
T Consensus        65 ~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~  106 (337)
T cd05054          65 IHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSK  106 (337)
T ss_pred             HhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhc
Confidence            345 68999999987754 45688999999999999988653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.50  E-value=0.00041  Score=28.95  Aligned_cols=41  Identities=39%  Similarity=0.857  Sum_probs=35.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+......++++++..++++..++...
T Consensus        45 ~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~   85 (215)
T cd00180          45 LKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN   85 (215)
T ss_pred             HHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhc
Confidence            34567899999999988888999999999989999988764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=97.49  E-value=0.00049  Score=30.57  Aligned_cols=37  Identities=43%  Similarity=1.118  Sum_probs=30.7

Q ss_pred             CCCeeceeceEEEe------CCEEEEEEeccCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLR------KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~------~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .|+|++++++.+..      ....++++|+++++++..++...
T Consensus        71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~  113 (282)
T cd06636          71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNT  113 (282)
T ss_pred             CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHc
Confidence            69999999987753      35789999999999999988653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG1025|consensus

Probab=97.48  E-value=3.9e-06  Score=43.02  Aligned_cols=41  Identities=20%  Similarity=0.244  Sum_probs=35.6

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +|.++.|+|++++.+.+..+. +.++.++++.|.|.++.+.+
T Consensus       751 ~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~h  791 (1177)
T KOG1025|consen  751 RMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREH  791 (1177)
T ss_pred             HHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHh
Confidence            367899999999999887755 78899999999999999864

>KOG0604|consensus

Probab=97.48  E-value=0.00011  Score=34.37  Aligned_cols=40  Identities=25%  Similarity=0.305  Sum_probs=33.0

Q ss_pred             CCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          5 CKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         5 l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      -.|+||+++++.+..    ...+.++||.+.||.|+..++.++.
T Consensus       112 s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~  155 (400)
T KOG0604|consen  112 SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD  155 (400)
T ss_pred             cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc
Confidence            469999999886643    3568899999999999999987765

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=97.45  E-value=0.00014  Score=32.52  Aligned_cols=39  Identities=18%  Similarity=0.405  Sum_probs=29.6

Q ss_pred             CccCCCCeeceeceEEEeCC----------EEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD----------KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~----------~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+....          ..++++|++++ ++...+..
T Consensus        60 ~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~  108 (302)
T cd07864          60 LRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLES  108 (302)
T ss_pred             HHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhc
Confidence            35678999999998876544          78999999985 66665553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=97.43  E-value=0.00022  Score=31.41  Aligned_cols=39  Identities=21%  Similarity=0.394  Sum_probs=30.0

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+|++++++.+...      ...+++++++.+|++..++.
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~   98 (272)
T cd05075          54 MKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLL   98 (272)
T ss_pred             HHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHH
Confidence            4567899999999865431      24678899999999988774

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG3653|consensus

Probab=97.41  E-value=0.00014  Score=35.44  Aligned_cols=39  Identities=31%  Similarity=0.570  Sum_probs=31.9

Q ss_pred             cCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          4 DCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .+.|+||+++++.-....    .+++++++.+.|+|.++++.+
T Consensus       260 ~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n  302 (534)
T KOG3653|consen  260 GMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN  302 (534)
T ss_pred             CccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc
Confidence            467999999987654433    689999999999999999864

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=97.40  E-value=6.3e-05  Score=33.15  Aligned_cols=39  Identities=28%  Similarity=0.513  Sum_probs=33.6

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|++++++++.+......+++++++. +++..++...
T Consensus        53 ~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~   91 (282)
T cd07829          53 KELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKR   91 (282)
T ss_pred             HhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhh
Confidence            45679999999998888889999999998 5899888765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=97.38  E-value=0.00042  Score=30.74  Aligned_cols=39  Identities=13%  Similarity=0.118  Sum_probs=31.7

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|+|++.+.+.+.. ...+++++++++|++.+.+...
T Consensus        64 ~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~  102 (279)
T cd05109          64 AGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVREN  102 (279)
T ss_pred             HhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhc
Confidence            45789999999987765 4567889999999999988753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG4236|consensus

Probab=97.36  E-value=0.00029  Score=35.32  Aligned_cols=46  Identities=13%  Similarity=0.323  Sum_probs=36.2

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh--hcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH--TYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~--~~~~~~~   47 (50)
                      |++.+.||.|+.+...+.+++.++++||-+. |+..+.+-  ..+.+++
T Consensus       616 ILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GDMLEMILSsEkgRL~e  663 (888)
T KOG4236|consen  616 ILQNLHHPGIVNLECMFETPERVFVVMEKLH-GDMLEMILSSEKGRLPE  663 (888)
T ss_pred             HHHhcCCCCeeEEEEeecCCceEEEEehhhc-chHHHHHHHhhcccchH
Confidence            4677899999999999999999999999987 56666553  3455554

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=97.34  E-value=0.0001  Score=33.59  Aligned_cols=44  Identities=23%  Similarity=0.373  Sum_probs=32.7

Q ss_pred             CccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|++++.+++.+..    ....+++++++. +++...+.....++
T Consensus        58 l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~  105 (334)
T cd07855          58 LRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLT  105 (334)
T ss_pred             HHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCC
Confidence            456789999998886643    346889999996 58888876555544

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.33  E-value=0.00061  Score=33.06  Aligned_cols=38  Identities=11%  Similarity=0.091  Sum_probs=31.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+.+++.+...+..+++++++. +++..++.
T Consensus       217 l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~  254 (501)
T PHA03210        217 LGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMY  254 (501)
T ss_pred             HHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHh
Confidence            456799999999999999999999999876 46666554

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=97.29  E-value=0.00042  Score=31.64  Aligned_cols=39  Identities=15%  Similarity=0.380  Sum_probs=30.6

Q ss_pred             ccC-CCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ +|+|++++++.+...  ...++++|++. +++...+...
T Consensus        61 ~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~  102 (337)
T cd07852          61 QELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN  102 (337)
T ss_pred             HHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC
Confidence            456 899999999987643  36899999997 5888877653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=97.28  E-value=9.7e-05  Score=33.47  Aligned_cols=44  Identities=16%  Similarity=0.305  Sum_probs=33.7

Q ss_pred             CccCCCCeeceeceEEEeCC-----EEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|++++.+.+.+....     .+++++++++ +++...+.....++
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~  101 (330)
T cd07834          53 LRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLT  101 (330)
T ss_pred             HHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCCCCC
Confidence            35678999999998877664     7899999988 47888877654444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=97.27  E-value=0.00063  Score=31.15  Aligned_cols=39  Identities=21%  Similarity=0.483  Sum_probs=30.2

Q ss_pred             CccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|||++++.+.+.. ....+++++++. +++...++.
T Consensus        63 l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  102 (328)
T cd07856          63 LKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTS  102 (328)
T ss_pred             HHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhc
Confidence            456789999999998765 456889999985 578777654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=97.24  E-value=0.0019  Score=28.82  Aligned_cols=37  Identities=16%  Similarity=0.265  Sum_probs=28.7

Q ss_pred             cCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhh
Q psy13313          4 DCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .+.|+|++++++.+..     ...+++++|++. +++..++..
T Consensus        60 ~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~  101 (290)
T cd07862          60 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK  101 (290)
T ss_pred             ccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHh
Confidence            4579999999987752     345889999997 588888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=97.22  E-value=0.0012  Score=29.80  Aligned_cols=38  Identities=29%  Similarity=0.618  Sum_probs=29.1

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+|++.+++.+..  ....+++++++.+ ++...+.
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~   91 (317)
T cd07867          52 LRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIK   91 (317)
T ss_pred             HHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHH
Confidence            456789999999987743  4578899999874 7766664

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=97.22  E-value=0.00031  Score=32.11  Aligned_cols=45  Identities=18%  Similarity=0.295  Sum_probs=32.9

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+...     ...+++++++. +++...+...+.+++
T Consensus        58 l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~  107 (337)
T cd07858          58 LRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSD  107 (337)
T ss_pred             HHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCH
Confidence            3457899999998876543     34789999986 688888776555443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.19  E-value=0.0002  Score=31.66  Aligned_cols=39  Identities=23%  Similarity=0.479  Sum_probs=32.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++++++.+......++++|++++ ++...+..
T Consensus        52 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~   90 (283)
T cd05118          52 LKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKD   90 (283)
T ss_pred             HHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHh
Confidence            3467899999999988888999999999975 77777665

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=97.15  E-value=0.002  Score=28.57  Aligned_cols=38  Identities=16%  Similarity=0.172  Sum_probs=30.6

Q ss_pred             cCCCCeeceeceEEEeCCE-----EEEEEeccCCCChHHHHhhc
Q psy13313          4 DCKHHNIIAYYGSYLRKDK-----LWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~~-----~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .+.|++++++++.+...+.     .+++++++. +++..++...
T Consensus        57 ~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~   99 (287)
T cd07838          57 SFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKC   99 (287)
T ss_pred             ccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHc
Confidence            3469999999999887766     899999987 4788877653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1023|consensus

Probab=97.11  E-value=0.0011  Score=32.51  Aligned_cols=40  Identities=28%  Similarity=0.591  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      |+.+.|.|+.++.|.+.++....++.++|..|++.+.+..
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~   40 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN   40 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence            5678999999999999999999999999999999999875

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=97.11  E-value=0.0007  Score=30.34  Aligned_cols=40  Identities=18%  Similarity=0.408  Sum_probs=29.7

Q ss_pred             CccCCCCeeceeceEEEeCC--------EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD--------KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~--------~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|++++++++.+....        ..++++|++. +++...+...
T Consensus        65 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~  112 (310)
T cd07865          65 LQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNK  112 (310)
T ss_pred             HHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhc
Confidence            35678999999998776543        3589999987 4777766543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=97.09  E-value=0.00088  Score=30.30  Aligned_cols=38  Identities=26%  Similarity=0.607  Sum_probs=29.3

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+|++++++.+..  ....+++++++. +++...+.
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~   91 (317)
T cd07868          52 LRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIK   91 (317)
T ss_pred             HHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHH
Confidence            456889999999987754  456889999986 47777665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=97.07  E-value=0.0016  Score=29.40  Aligned_cols=39  Identities=26%  Similarity=0.571  Sum_probs=30.3

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++++++.+...  +..++++|++. +++...+..
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~  100 (309)
T cd07845          60 LLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDN  100 (309)
T ss_pred             HHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHh
Confidence            3567899999999887654  56899999987 477777654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0594|consensus

Probab=97.06  E-value=0.0017  Score=30.42  Aligned_cols=41  Identities=20%  Similarity=0.368  Sum_probs=34.4

Q ss_pred             CccCCCCe-eceeceEEEeCC------EEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHN-IIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~-i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+| |+.+++.+.+..      .+++++|+.. .++..++....
T Consensus        64 lk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~  111 (323)
T KOG0594|consen   64 LKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLP  111 (323)
T ss_pred             HHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhcc
Confidence            46788999 999999988877      7889999987 58998887654

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=97.05  E-value=0.0015  Score=31.76  Aligned_cols=39  Identities=18%  Similarity=0.501  Sum_probs=29.9

Q ss_pred             ccCCCCeeceeceEEEeCC--------EEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKD--------KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~--------~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ..+.|++++.++..+...+        .+++++|++++|+|.+.+..
T Consensus        86 ~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~  132 (496)
T PTZ00283         86 LNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKS  132 (496)
T ss_pred             hcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHH
Confidence            4567899998877654322        36799999999999998864

>PTZ00036 glycogen synthase kinase; Provisional

Probab=96.99  E-value=0.0018  Score=30.99  Aligned_cols=38  Identities=26%  Similarity=0.331  Sum_probs=27.4

Q ss_pred             CccCCCCeeceeceEEEeC--------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+|++.+++.+...        ..+++++|++++ ++...+.
T Consensus       113 l~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~  158 (440)
T PTZ00036        113 MKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMK  158 (440)
T ss_pred             HHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHH
Confidence            5678899999988765432        247789999985 6665554

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=96.97  E-value=0.0017  Score=29.04  Aligned_cols=38  Identities=16%  Similarity=0.287  Sum_probs=29.3

Q ss_pred             ccC-CCCeeceeceEEEeCCE-----EEEEEeccCCCChHHHHhh
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDK-----LWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~-----~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+ +|++++++++.+...+.     .+++++++.+ ++..++..
T Consensus        55 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~   98 (295)
T cd07837          55 QMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDS   98 (295)
T ss_pred             HHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHH
Confidence            344 46999999988876555     8999999985 78877754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=96.93  E-value=0.0013  Score=30.32  Aligned_cols=39  Identities=21%  Similarity=0.469  Sum_probs=29.5

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++.+.+.+....      ..+++++++ ++++...+..
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~  112 (343)
T cd07880          68 LKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH  112 (343)
T ss_pred             HHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc
Confidence            45678999999998776543      357899988 5688877754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=96.91  E-value=0.0021  Score=28.38  Aligned_cols=39  Identities=26%  Similarity=0.418  Sum_probs=29.6

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|++++++++.+....      ..++++++..++++..++.
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   99 (273)
T cd05074          55 MKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL   99 (273)
T ss_pred             HhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHH
Confidence            45678999999998765432      2467889999999987764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0666|consensus

Probab=96.87  E-value=0.00023  Score=33.51  Aligned_cols=40  Identities=25%  Similarity=0.551  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++...+.. +..++++++|++ .+|...++-+
T Consensus        81 ~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fH  121 (438)
T KOG0666|consen   81 LRELKHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFH  121 (438)
T ss_pred             HHHhcCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHh
Confidence            467899999999876665 778999999998 4888888754

>KOG0662|consensus

Probab=96.84  E-value=0.00019  Score=31.56  Aligned_cols=39  Identities=26%  Similarity=0.542  Sum_probs=32.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|.||+++++....+..+-+++|+|. .++.++...
T Consensus        55 lkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfds   93 (292)
T KOG0662|consen   55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDS   93 (292)
T ss_pred             HHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHh
Confidence            567899999999999988899999999996 477666654

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=96.81  E-value=0.0058  Score=27.27  Aligned_cols=37  Identities=16%  Similarity=0.227  Sum_probs=28.2

Q ss_pred             cCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhh
Q psy13313          4 DCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .+.|+|++++++.+..     ...+++++|+++ +++..++..
T Consensus        58 ~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~   99 (288)
T cd07863          58 AFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDK   99 (288)
T ss_pred             hcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHh
Confidence            3579999999987654     245789999987 478777764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=96.75  E-value=0.0025  Score=29.48  Aligned_cols=37  Identities=22%  Similarity=0.451  Sum_probs=27.2

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~   39 (50)
                      ++.++|+|++++++.+....      ..++++|++.+ ++...+
T Consensus        74 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~  116 (359)
T cd07876          74 LKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVI  116 (359)
T ss_pred             HHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHH
Confidence            45678999999998775432      47899999975 455444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG1243|consensus

Probab=96.66  E-value=0.0015  Score=33.23  Aligned_cols=30  Identities=23%  Similarity=0.461  Sum_probs=26.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCG   31 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~   31 (50)
                      |+.++||+|++++..+..++.+|++.|-..
T Consensus        63 lKtlRHP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   63 LKTLRHPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             hhhccCchhhhhhhhhcccCceEEEeeccc
Confidence            567899999999999999999999999764

>KOG1027|consensus

Probab=96.65  E-value=0.0031  Score=32.93  Aligned_cols=36  Identities=39%  Similarity=0.672  Sum_probs=32.2

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .||||+++++.=.+..+.|+..|.|. .+|.+++...
T Consensus       561 ~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~  596 (903)
T KOG1027|consen  561 EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESS  596 (903)
T ss_pred             CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhcc
Confidence            69999999998888999999999997 4999998864

>KOG0193|consensus

Probab=96.64  E-value=0.00087  Score=33.75  Aligned_cols=39  Identities=28%  Similarity=0.572  Sum_probs=33.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.-+|-||+-+.|++..+.. .++..+|.|.+|..++..
T Consensus       442 lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv  480 (678)
T KOG0193|consen  442 LKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHV  480 (678)
T ss_pred             HhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccc
Confidence            456789999999999887766 888999999999998864

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=96.54  E-value=0.0038  Score=28.08  Aligned_cols=35  Identities=23%  Similarity=0.577  Sum_probs=29.0

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .|++++++++.+.+....++++++++ +++...+..
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~  106 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKR  106 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHH
Confidence            59999999999999999999999986 466665544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.44  E-value=0.0025  Score=27.39  Aligned_cols=37  Identities=19%  Similarity=0.380  Sum_probs=26.5

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.++++......+......++++++++++++.+.+..
T Consensus        56 l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~   92 (211)
T PRK14879         56 ARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS   92 (211)
T ss_pred             HHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh
Confidence            4455565555555566678899999999999888754

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.39  E-value=0.0054  Score=30.22  Aligned_cols=38  Identities=21%  Similarity=0.335  Sum_probs=28.7

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      +.+.|+++.............++++|+++++++.+.+.
T Consensus       391 ~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        391 SEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             HhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH
Confidence            45667777766655666667789999999999988763

>KOG1345|consensus

Probab=96.38  E-value=0.00096  Score=31.08  Aligned_cols=38  Identities=21%  Similarity=0.355  Sum_probs=30.7

Q ss_pred             CCCeeceece-EEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          6 KHHNIIAYYG-SYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         6 ~h~~i~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .|.+|+..++ .+++.+...+++|++|.|+|..-+...|
T Consensus        79 ~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G  117 (378)
T KOG1345|consen   79 PHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG  117 (378)
T ss_pred             cchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc
Confidence            4788887665 6888898899999999999988766543

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=96.37  E-value=0.007  Score=28.14  Aligned_cols=38  Identities=26%  Similarity=0.472  Sum_probs=27.7

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+|++.+++.+...      ..+++++|++.+ ++...+.
T Consensus        77 l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  120 (364)
T cd07875          77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ  120 (364)
T ss_pred             HHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHH
Confidence            4567899999998876443      357899999975 5655554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=96.35  E-value=0.0074  Score=27.95  Aligned_cols=38  Identities=24%  Similarity=0.454  Sum_probs=28.4

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+|++++++.+...      ...++++|++. +++...+.
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  112 (353)
T cd07850          69 MKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ  112 (353)
T ss_pred             HHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHh
Confidence            4567899999999877543      35789999996 47776654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0658|consensus

Probab=96.30  E-value=0.00049  Score=32.48  Aligned_cols=40  Identities=20%  Similarity=0.326  Sum_probs=29.6

Q ss_pred             CCccCCCCeeceeceEEEeC--C---EEEEEEeccCCCChHHHHhh
Q psy13313          1 MMKDCKHHNIIAYYGSYLRK--D---KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~--~---~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +|+.+.||||+.+..++...  .   ...+++||+|. +|...++.
T Consensus        70 im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~  114 (364)
T KOG0658|consen   70 IMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRH  114 (364)
T ss_pred             HHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHH
Confidence            36678999999997766542  2   34578999984 88888874

>KOG0660|consensus

Probab=96.18  E-value=0.0025  Score=30.22  Aligned_cols=44  Identities=16%  Similarity=0.355  Sum_probs=34.0

Q ss_pred             CccCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+||+.+.+.+..     -..+++++|++. .+|...++....+.
T Consensus        75 Lr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~~L~  123 (359)
T KOG0660|consen   75 LRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQDLT  123 (359)
T ss_pred             HHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHcCcccc
Confidence            456789999999887765     246899999995 59999888765443

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=96.17  E-value=0.013  Score=26.25  Aligned_cols=31  Identities=35%  Similarity=0.762  Sum_probs=25.2

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHH
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD   37 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~   37 (50)
                      .|+|++++++.+..+...+++++++.. ++..
T Consensus        61 ~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~   91 (288)
T cd06616          61 DCPYIVKFYGALFREGDCWICMELMDI-SLDK   91 (288)
T ss_pred             CCCCEeeeeeEEecCCcEEEEEecccC-CHHH
Confidence            499999999988888888999999764 4443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=96.07  E-value=0.002  Score=29.69  Aligned_cols=39  Identities=18%  Similarity=0.438  Sum_probs=29.3

Q ss_pred             CccCCCCeeceeceEEEeCCE------EEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDK------LWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~------~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+.+.+.....      .+++++++. +++.+++..
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  112 (343)
T cd07851          68 LKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKC  112 (343)
T ss_pred             HHhccCCCHHHHHHHhhccccccccccEEEEEecCC-CCHHHHHhc
Confidence            356789999998876655443      889999884 688888764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=96.00  E-value=0.0042  Score=27.92  Aligned_cols=38  Identities=16%  Similarity=0.398  Sum_probs=26.8

Q ss_pred             CccCCCCeeceeceEEEeC--------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|++++++++.+...        ..+++++++..+ ++...+.
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~  106 (311)
T cd07866          61 LKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLE  106 (311)
T ss_pred             HHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHh
Confidence            4567899999998866432        346889999874 5665554

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=95.96  E-value=0.0049  Score=28.37  Aligned_cols=39  Identities=21%  Similarity=0.489  Sum_probs=28.1

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+.+++.+...      ...+++++++ ++++...++.
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~  112 (343)
T cd07878          68 LKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC  112 (343)
T ss_pred             HHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc
Confidence            4567899999998876532      3467888877 5788777653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=95.95  E-value=0.0049  Score=26.30  Aligned_cols=37  Identities=22%  Similarity=0.267  Sum_probs=23.6

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.++++.............++++|+++++++.+.+..
T Consensus        54 l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~   90 (199)
T TIGR03724        54 ARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE   90 (199)
T ss_pred             HHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh
Confidence            3344433333334455566899999999999877654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=95.94  E-value=0.005  Score=28.48  Aligned_cols=38  Identities=24%  Similarity=0.467  Sum_probs=27.5

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+|++++++.+...      ...++++|++.+ ++...+.
T Consensus        70 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  113 (355)
T cd07874          70 MKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ  113 (355)
T ss_pred             HHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHh
Confidence            3567899999999877543      347899999975 5555543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0603|consensus

Probab=95.90  E-value=0.016  Score=29.46  Aligned_cols=39  Identities=23%  Similarity=0.360  Sum_probs=33.8

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ..|+|++++++.+.+....|+++|...++.+...+....
T Consensus       373 ~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~  411 (612)
T KOG0603|consen  373 RDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP  411 (612)
T ss_pred             cCCCcceeecceecCCceeeeeehhccccHHHHHHHhcc
Confidence            479999999999999999999999999988877776543

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=95.84  E-value=0.0071  Score=27.93  Aligned_cols=39  Identities=21%  Similarity=0.431  Sum_probs=28.6

Q ss_pred             CccCCCCeeceeceEEEeC--------------CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--------------DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--------------~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|++++++++.+...              ...++++|++. +++...+..
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  108 (342)
T cd07854          56 IRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ  108 (342)
T ss_pred             HHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc
Confidence            4567899999988765443              35789999997 588777653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=95.80  E-value=0.012  Score=27.12  Aligned_cols=39  Identities=23%  Similarity=0.347  Sum_probs=28.3

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++.+++.+...     ...+++++++. +++...+..
T Consensus        57 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~  100 (336)
T cd07849          57 LRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT  100 (336)
T ss_pred             HHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc
Confidence            3567899999998866543     34788999987 477766653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=95.71  E-value=0.019  Score=26.63  Aligned_cols=39  Identities=21%  Similarity=0.479  Sum_probs=27.2

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+...      ...+++.+++ ++++...++.
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~  114 (345)
T cd07877          70 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC  114 (345)
T ss_pred             HHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc
Confidence            4567899999998876543      2356666665 5788776653

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0596|consensus

Probab=95.60  E-value=0.088  Score=27.12  Aligned_cols=39  Identities=26%  Similarity=0.340  Sum_probs=33.0

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIF   45 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~   45 (50)
                      .|.+|++++++=.+++.+|++||+-. .+|.+.+++....
T Consensus       418 g~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~  456 (677)
T KOG0596|consen  418 GHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSI  456 (677)
T ss_pred             CCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCC
Confidence            47899999999889999999999865 5999999876543

>KOG2345|consensus

Probab=95.53  E-value=0.0026  Score=29.23  Aligned_cols=40  Identities=23%  Similarity=0.384  Sum_probs=30.6

Q ss_pred             ccCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +..+|||++++.++...     ....|++.++...|++.+.++..
T Consensus        73 rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~  117 (302)
T KOG2345|consen   73 RKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERL  117 (302)
T ss_pred             HhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHH
Confidence            35678999988765432     34589999999999999988753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=95.38  E-value=0.015  Score=26.22  Aligned_cols=36  Identities=19%  Similarity=0.361  Sum_probs=26.1

Q ss_pred             ccCCCCeeceeceEEEeC--------CEEEEEEeccCCCChHHH
Q psy13313          3 KDCKHHNIIAYYGSYLRK--------DKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~--------~~~~l~~~~~~~~~l~~~   38 (50)
                      ..+.|+++......+...        ...+++||+++|.++.+.
T Consensus        90 ~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~  133 (232)
T PRK10359         90 DRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDM  133 (232)
T ss_pred             HHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHh
Confidence            346788888877654432        357899999999888665

>PRK09188 serine/threonine protein kinase; Provisional

Probab=95.37  E-value=0.014  Score=27.85  Aligned_cols=31  Identities=13%  Similarity=0.216  Sum_probs=23.0

Q ss_pred             CccCCCCeece-eceEEEeCCEEEEEEeccCCCChH
Q psy13313          2 MKDCKHHNIIA-YYGSYLRKDKLWICMEYCGGGSLQ   36 (50)
Q Consensus         2 l~~l~h~~i~~-~~~~~~~~~~~~l~~~~~~~~~l~   36 (50)
                      ++.+.|++++. ++.    .+..++++|++++++|.
T Consensus        75 L~~L~h~~iv~~l~~----~~~~~LVmE~~~G~~L~  106 (365)
T PRK09188         75 LKTVRGIGVVPQLLA----TGKDGLVRGWTEGVPLH  106 (365)
T ss_pred             HHhccCCCCCcEEEE----cCCcEEEEEccCCCCHH
Confidence            45678888875 332    24578999999998886

>KOG0984|consensus

Probab=94.71  E-value=0.03  Score=25.52  Aligned_cols=37  Identities=32%  Similarity=0.781  Sum_probs=29.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~   39 (50)
                      ++....|+++.++|.......+|+.||.+.. ++.++-
T Consensus        99 ~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy  135 (282)
T KOG0984|consen   99 MRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFY  135 (282)
T ss_pred             ccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHH
Confidence            4556789999999999888999999999874 665543

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=94.71  E-value=0.16  Score=23.51  Aligned_cols=40  Identities=20%  Similarity=0.315  Sum_probs=27.7

Q ss_pred             CCCeeceeceEEEeC----CEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          6 KHHNIIAYYGSYLRK----DKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~----~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      .|+|++++++.....    ...+++++++. +++...+.....++
T Consensus        60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~  103 (332)
T cd07857          60 GHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLT  103 (332)
T ss_pred             CCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCC
Confidence            599999998754322    34677788876 58888876555544

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0667|consensus

Probab=94.54  E-value=0.052  Score=27.72  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=30.8

Q ss_pred             CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          7 HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         7 h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .-|++.+++++.-.++.++++|... ..|.++++..
T Consensus       247 ~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n  281 (586)
T KOG0667|consen  247 KYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNN  281 (586)
T ss_pred             CeeEEEeeeccccccceeeeehhhh-hhHHHHHHhc
Confidence            4589999999999999999999997 5899999864

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=93.89  E-value=0.055  Score=25.13  Aligned_cols=37  Identities=24%  Similarity=0.519  Sum_probs=26.1

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~   39 (50)
                      ++.+.|+|++++++++...      ...+++++++.. ++....
T Consensus        68 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~  110 (342)
T cd07879          68 LKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM  110 (342)
T ss_pred             HHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHH
Confidence            3467899999999877643      245888898763 555543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0603|consensus

Probab=93.54  E-value=0.014  Score=29.72  Aligned_cols=41  Identities=15%  Similarity=0.316  Sum_probs=35.3

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +||+++.++..++++...+++.++..+|++...+.....+.
T Consensus        55 ~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~   95 (612)
T KOG0603|consen   55 NTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFD   95 (612)
T ss_pred             CCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchH
Confidence            48999999999999999999999999999988877655543

>KOG0983|consensus

Probab=93.36  E-value=0.0045  Score=29.07  Aligned_cols=41  Identities=17%  Similarity=0.435  Sum_probs=29.7

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh-cCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT-YKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~   47 (50)
                      ..|+|++.+|+|.+...+++.||.+.. .+.+++++ .+++||
T Consensus       149 dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE  190 (391)
T KOG0983|consen  149 DCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPE  190 (391)
T ss_pred             CCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchH
Confidence            479999999999999889999998752 44454443 344444

>KOG1006|consensus

Probab=92.46  E-value=0.014  Score=27.39  Aligned_cols=36  Identities=36%  Similarity=0.763  Sum_probs=28.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~   38 (50)
                      |++-+.|+|++++|+...++.-|+.||.+.. ++..+
T Consensus       117 mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDkl  152 (361)
T KOG1006|consen  117 MKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKL  152 (361)
T ss_pred             HhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHH
Confidence            4556789999999998888889999998863 55443

>KOG1266|consensus

Probab=92.11  E-value=0.046  Score=26.55  Aligned_cols=38  Identities=21%  Similarity=0.405  Sum_probs=29.8

Q ss_pred             CCCCeeceeceEEEeCC-----EEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +-|.|+++++.+|.+..     .+.+..+|...|++..++++.
T Consensus       124 lvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt  166 (458)
T KOG1266|consen  124 LVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRT  166 (458)
T ss_pred             HHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHH
Confidence            45888999988876543     467788999999999988753

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=91.70  E-value=0.11  Score=22.51  Aligned_cols=15  Identities=20%  Similarity=0.346  Sum_probs=11.8

Q ss_pred             EEEEeccCCCChHHH
Q psy13313         24 WICMEYCGGGSLQDI   38 (50)
Q Consensus        24 ~l~~~~~~~~~l~~~   38 (50)
                      +++||+++++++...
T Consensus        93 ~iVmE~i~g~~l~~~  107 (190)
T cd05147          93 VLVMEFIGDDGWAAP  107 (190)
T ss_pred             EEEEEEeCCCCCcch
Confidence            799999998766544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=90.62  E-value=0.87  Score=20.23  Aligned_cols=40  Identities=33%  Similarity=0.665  Sum_probs=31.2

Q ss_pred             ccCCCC-eeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~-~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+.|+ +++.+.+.+......+++++++.++++...+...
T Consensus        52 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   92 (384)
T COG0515          52 ASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKI   92 (384)
T ss_pred             HHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhc
Confidence            345666 6888888887777789999999999998666543

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=90.17  E-value=0.36  Score=24.41  Aligned_cols=21  Identities=14%  Similarity=0.423  Sum_probs=18.4

Q ss_pred             CEEEEEEeccCCCChHHHHhh
Q psy13313         21 DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus        21 ~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +..++++|++++++|.+++..
T Consensus       258 ~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        258 GSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             CceEEEEEcCCCCcHHHHHhh
Confidence            468999999999999998874

>PRK12274 serine/threonine protein kinase; Provisional

Probab=89.03  E-value=0.57  Score=21.30  Aligned_cols=33  Identities=9%  Similarity=0.078  Sum_probs=22.1

Q ss_pred             CccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHH
Q psy13313          2 MKDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~   38 (50)
                      |+.+. ++++..++++    ...++++++..+.+|...
T Consensus        55 L~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~   88 (218)
T PRK12274         55 LRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQR   88 (218)
T ss_pred             HHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhh
Confidence            34563 4667776653    346889999988887654

>PTZ00284 protein kinase; Provisional

Probab=88.92  E-value=1.8  Score=21.41  Aligned_cols=41  Identities=15%  Similarity=0.168  Sum_probs=28.2

Q ss_pred             CCCeeceeceEEEeC-CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRK-DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .+.+++.+.+++... ...+++++++ ++++..++...+.+++
T Consensus       189 ~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~  230 (467)
T PTZ00284        189 DRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSH  230 (467)
T ss_pred             cCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCH
Confidence            345677777777654 4678888877 5688888776655543

>KOG1024|consensus

Probab=87.57  E-value=2  Score=21.92  Aligned_cols=38  Identities=16%  Similarity=0.275  Sum_probs=29.5

Q ss_pred             cCCCCeeceeceEE-EeCCEEEEEEeccCCCChHHHHhh
Q psy13313          4 DCKHHNIIAYYGSY-LRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         4 ~l~h~~i~~~~~~~-~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ...|+|+.++.+.. .+....++...+..-|.|..+++.
T Consensus       343 ~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~  381 (563)
T KOG1024|consen  343 GASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQI  381 (563)
T ss_pred             cCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHH
Confidence            46799999988754 445667788888888999988874

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=87.47  E-value=0.49  Score=20.42  Aligned_cols=14  Identities=21%  Similarity=0.335  Sum_probs=10.6

Q ss_pred             EEEEEeccCCCChH
Q psy13313         23 LWICMEYCGGGSLQ   36 (50)
Q Consensus        23 ~~l~~~~~~~~~l~   36 (50)
                      .+++||+++++++.
T Consensus        92 ~~lVmE~~~g~~~~  105 (190)
T cd05145          92 NVLVMEFIGDDGSP  105 (190)
T ss_pred             CEEEEEEecCCCch
Confidence            37999999887543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0669|consensus

Probab=86.95  E-value=0.03  Score=26.24  Aligned_cols=39  Identities=13%  Similarity=0.424  Sum_probs=27.8

Q ss_pred             CccCCCCeeceeceEEEe--------CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--------KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--------~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +..+.|+|++.+...|.+        ...+++++.+|.. +|+.++..
T Consensus        70 L~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn  116 (376)
T KOG0669|consen   70 LQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSN  116 (376)
T ss_pred             HHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcC
Confidence            455789999888765543        2358899999984 88877754

>KOG3741|consensus

Probab=85.38  E-value=0.88  Score=23.79  Aligned_cols=37  Identities=24%  Similarity=0.476  Sum_probs=26.8

Q ss_pred             ccCCCCeeceeceEEEe----CCEEEEEEeccCC-CChHHHH
Q psy13313          3 KDCKHHNIIAYYGSYLR----KDKLWICMEYCGG-GSLQDIY   39 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~-~~l~~~~   39 (50)
                      +.+.|.|++.+...+.+    +..+.++++|.|+ ++|.++-
T Consensus       328 kkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  328 KKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             HHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            45789999999887764    3457888998764 6666654

>KOG0590|consensus

Probab=84.08  E-value=0.15  Score=26.12  Aligned_cols=41  Identities=24%  Similarity=0.271  Sum_probs=28.2

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      ..+.|++++.....+.......-.||+++. +|+..+...+.
T Consensus       376 ~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~  416 (601)
T KOG0590|consen  376 SSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGK  416 (601)
T ss_pred             ccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccc
Confidence            356888887766655544444444899998 99988876533

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=82.61  E-value=1.8  Score=17.16  Aligned_cols=29  Identities=17%  Similarity=0.170  Sum_probs=20.3

Q ss_pred             CeeceeceEEEeCCEEEEEEeccCCCChH
Q psy13313          8 HNIIAYYGSYLRKDKLWICMEYCGGGSLQ   36 (50)
Q Consensus         8 ~~i~~~~~~~~~~~~~~l~~~~~~~~~l~   36 (50)
                      ..+.++.......+..+++++++.++++.
T Consensus        53 ~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120          53 LPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             CCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            35566666665556788999998876554

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1035|consensus

Probab=82.28  E-value=0.33  Score=27.37  Aligned_cols=19  Identities=21%  Similarity=0.688  Sum_probs=15.4

Q ss_pred             CccCCCCeeceeceEEEeC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK   20 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~   20 (50)
                      +++++|||+++++.+|...
T Consensus       531 LArLnHpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  531 LARLNHPNVVRYYSAWVES  549 (1351)
T ss_pred             HhhcCCcceeeeehhhhcc
Confidence            5678999999999877653

>KOG1167|consensus

Probab=80.60  E-value=3.4  Score=20.86  Aligned_cols=36  Identities=25%  Similarity=0.520  Sum_probs=30.0

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .+.|++.+.+++...+.+.+++++.+..+..++...
T Consensus        93 G~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen   93 GSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             cchhhhcchhhhccCCeeEEEecccCccCHHHHHhc
Confidence            477889999999889999999999988777666543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	50
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		9e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-06
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-06
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-06
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-06
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-06
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-06
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-06
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-06
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-06
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-06
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-06
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		8e-06
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-04

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+ C   +++ YYGSY +   LWI MEYCG GS+ DI
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI-----YHTYKIFPLLKK 50
           ++  C    +  YYGSYL+  KLWI MEY GGGS  D+     +  ++I  +LK+
Sbjct: 74  VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE 128

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 70  IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 201 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 74  IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 79  IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 81  IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 1   MMKDCKHH-NIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHTYK 43
           M+K   HH NI  YYG++++K      D+LW+ ME+CG GS+ D+    K
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           ++  C    +  YYGSYL+  KLWI MEY GGGS  D+
Sbjct: 78  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL 115

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           ++  C    +  YYGSYL+  KLWI MEY GGGS  D+
Sbjct: 73  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL 110

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           M  C H NI++YY S++ KD+LW+ M+   GGS+ DI
Sbjct: 67  MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 103

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++  C    +  YYGSYL+  KLWI MEY GGGS  D+
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL 95

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          M  C H NI++YY S++ KD+LW+ M+   GGS+ DI
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 98

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          ++  C    +  YYGSYL+  KLWI MEY GGGS  D+
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL 95

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 71  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 71  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 108

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV 107

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D  H N++  Y SYL  D+LW+ ME+  GG+L DI
Sbjct: 95  IMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           ++  C    I  Y+GSYL+  KLWI MEY GGGS  D+
Sbjct: 70  VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDL 107

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +M+D +H N++  Y SYL  ++LW+ ME+  GG+L DI
Sbjct: 95  IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  +H N I Y G YLR+   W+ MEYC  GS  D+   +K
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK 148

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  +H N I Y G YLR+   W+ MEYC  GS  D+   +K
Sbjct: 69  LQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK 109

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	50
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-21
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-21
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-20
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-20
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-19
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-19
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-18
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-18
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-18
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-17
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-14
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-14
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-13
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-12
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-07
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-06
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	6e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-04

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 81.3 bits (201), Expect = 5e-21
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT 41
           +M+ C   +++ YYGSY +   LWI MEYCG GS+ DI   
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 80.4 bits (199), Expect = 9e-21
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI 44
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+     +
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM 113

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 80.5 bits (199), Expect = 1e-20
 Identities = 17/44 (38%), Positives = 29/44 (65%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI 44
           +M+D +H N++  Y SYL  ++LW+ ME+  GG+L DI    ++
Sbjct: 95  IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRL 138

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 78.9 bits (195), Expect = 4e-20
 Identities = 19/44 (43%), Positives = 25/44 (56%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI 44
           ++  C    +  YYGSYL+  KLWI MEY GGGS  D+     +
Sbjct: 73  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL 116

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 78.9 bits (195), Expect = 4e-20
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  C H  I+   G+Y    KLWI +E+C GG++  I     
Sbjct: 69  ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD 111

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 77.3 bits (190), Expect = 2e-19
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           + K   H NI+ Y  +++  ++LW+   +   GS +D+  T+ +  +
Sbjct: 79  VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM 125

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 75.8 bits (187), Expect = 4e-19
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY 39
            M  C H NI++YY S++ KD+LW+ M+   GGS+ DI 
Sbjct: 66  AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 104

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 75.1 bits (185), Expect = 1e-18
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
            ++  +H N I Y G YLR+   W+ MEYC G +   +    K   
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ 152

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 74.3 bits (183), Expect = 2e-18
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 1   MMKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHTYKIFPL 47
           + K   H NI  YYG++++K      D+LW+ ME+CG GS+ D+    K   L
Sbjct: 74  LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 73.0 bits (179), Expect = 9e-18
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++ +C    I+ +YG++    ++ ICME+  GGSL  +       P
Sbjct: 84  VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 129

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 71.7 bits (176), Expect = 2e-17
 Identities = 11/46 (23%), Positives = 15/46 (32%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
                    I+  YG+      + I ME   GGSL  +       P
Sbjct: 103 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP 148

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 68.2 bits (167), Expect = 4e-16
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++K      I+  +G+++    ++I ME  G  + +         P
Sbjct: 77  VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIP 122

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 64.2 bits (157), Expect = 7e-15
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY-HTYKIFPL 47
           + K  KH NI+ Y GS+     + I ME   GGSL  +    +     
Sbjct: 72  LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD 119

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 63.1 bits (154), Expect = 2e-14
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           +M+      I+ +YG+  R+   WICME       +   + Y +  
Sbjct: 74  VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLD 119

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 60.7 bits (148), Expect = 1e-13
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIY 39
           M+       + +YG+  R+  +WICME     SL   Y
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFY 96

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 60.8 bits (148), Expect = 2e-13
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
                +H +++ Y+ ++   D + I  EYC GGSL D      
Sbjct: 64  HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY 106

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 59.3 bits (144), Expect = 6e-13
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 1   MMKDCKHHNIIAYYGSYL----RKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           M+K  +H NI+ +Y S+      K  + +  E    G+L+     +K+  +
Sbjct: 78  MLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI 128

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.1 bits (141), Expect = 2e-12
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           +K   H N+I YY S++  ++L I +E    G L  +
Sbjct: 86  LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 122

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 55.4 bits (134), Expect = 2e-11
 Identities = 8/46 (17%), Positives = 14/46 (30%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
             K  +H   +    ++     L++  E CG    Q         P
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLP 155

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 54.3 bits (131), Expect = 4e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
           ++ + KH NI+ Y  S+     L+I M+YC GG L   
Sbjct: 76  VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 49.6 bits (119), Expect = 2e-09
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI 44
           +    KH NIIA  G  L++  L + ME+  GG L  +    +I
Sbjct: 59  LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI 102

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 48.5 bits (116), Expect = 4e-09
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 13/58 (22%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD-------------KLWICMEYCGGGSLQDIYHTYKIF 45
           ++    H  ++ YY ++L +               L+I MEYC  G+L D+ H+  + 
Sbjct: 55  LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN 112

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 48.1 bits (115), Expect = 6e-09
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           +MK  +H NI+ + G+  +   L I  EY   GSL  + H
Sbjct: 87  IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH 126

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 46.2 bits (110), Expect = 3e-08
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLL 48
           +    H NI+  YG+ L  + + + MEY  GGSL ++ H  +  P  
Sbjct: 54 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY 99

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 45.8 bits (109), Expect = 3e-08
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI 44
             +  +H N++ + G+ +    L I    C G +L  +    KI
Sbjct: 82  AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI 125

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.9 bits (107), Expect = 8e-08
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 1  MMKDCKHHNIIAYYGSYL--RKDKLWICMEYCGGGSLQDI 38
          ++++ KH NI+ YY   +      L+I MEYC GG L  +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV 97

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 44.8 bits (106), Expect = 9e-08
 Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 1   MMKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQDIY 39
           ++++   H N+I Y+ +   +   +I +E C   +LQ+  
Sbjct: 70  LLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYV 108

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 44.4 bits (105), Expect = 1e-07
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTYKI 44
                +H NI+ +  +  + +    +LW+  +Y   GSL D  + Y +
Sbjct: 89  QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 136

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT 41
           +M+  +H N++ + G   +  +L    EY  GG+L+ I  +
Sbjct: 60  VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS 100

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 43.5 bits (103), Expect = 2e-07
 Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           +M +  H NI+  YG     +   + ME+   G L     
Sbjct: 76  IMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLL 113

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 43.4 bits (103), Expect = 2e-07
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 16/63 (25%)

Query: 1   MMKDCKHHNIIAYYGSYL----------------RKDKLWICMEYCGGGSLQDIYHTYKI 44
            +    H NI+ Y G +                 +   L+I ME+C  G+L+      + 
Sbjct: 57  ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116

Query: 45  FPL 47
             L
Sbjct: 117 EKL 119

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.5 bits (103), Expect = 2e-07
 Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDI 38
           M +   H NI+      LR+     + W+ + +   G+L + 
Sbjct: 79  MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNE 120

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 42.7 bits (101), Expect = 4e-07
 Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTYKI 44
                +H NI+ +  S +       +LW+   Y   GSL D      +
Sbjct: 55  NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTL 102

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 42.7 bits (100), Expect = 6e-07
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
            +K    H  + +Y ++L ++   +  E    G+L +  + YK  P
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTP 165

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.0 bits (99), Expect = 7e-07
 Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTYKI 44
                +H NI+ +  + ++      +L++  +Y   GSL D   +  +
Sbjct: 84  QTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTL 131

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.0 bits (99), Expect = 1e-06
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 3/48 (6%)

Query: 1   MMKDCKHHN--IIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
            +   + H+  II  Y   +    +++ ME CG   L       K   
Sbjct: 60  YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID 106

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 2/49 (4%)

Query: 1   MMKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHTYKIFPL 47
            ++   H N++   G+          +   +   GSL ++ H    F +
Sbjct: 60  RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV 108

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++K   H ++I  YG+  +   L + +EY   GSL+ 
Sbjct: 79  VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.7 bits (98), Expect = 1e-06
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 3/48 (6%)

Query: 1   MMKDCKHHN--IIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
            +   + H+  II  Y   +    +++ ME CG   L       K   
Sbjct: 107 YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID 153

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.2 bits (97), Expect = 2e-06
 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 12/49 (24%)

Query: 2   MKDCKHHNIIAYYGSYLRKDK------------LWICMEYCGGGSLQDI 38
           +   +H  I+ Y+ ++L K+             L+I M+ C   +L+D 
Sbjct: 57  LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDW 105

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 40.8 bits (96), Expect = 3e-06
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 3/48 (6%)

Query: 1   MMKDCKHHN--IIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
            +   + H+  II  Y   +    +++ ME CG   L       K   
Sbjct: 79  YLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID 125

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 40.5 bits (95), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
          + +   H N+I YY S      L+I +E C   +LQD+
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDL 98

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 40.4 bits (95), Expect = 3e-06
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +MK+   H+++   G   +     + ME    G L+ 
Sbjct: 81  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           +++  +H NI+ + G Y    +L I  ++C G SL    H  +
Sbjct: 73  VLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASE 114

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.1 bits (94), Expect = 5e-06
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++K   H NI+  Y  +  K   ++  E   GG L D
Sbjct: 79  LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 115

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 39.7 bits (93), Expect = 6e-06
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++K   H NII  +  +  K   ++  E+  GG L +
Sbjct: 99  LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 39.5 bits (93), Expect = 6e-06
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +MK   H NII  Y ++     +++ ME C GG L +
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE 95

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 39.4 bits (92), Expect = 6e-06
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +MK+ KH N++   G   R+   +I  E+   G+L D
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 305

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 39.6 bits (93), Expect = 7e-06
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++    H NII     +    ++ + +E   GG L D
Sbjct: 101 VLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD 137

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 39.2 bits (92), Expect = 7e-06
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++    H NI+   G  L+    +I ME   GG L+ 
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 39.3 bits (92), Expect = 8e-06
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++K   H NI+  Y  +  K   ++ ME   GG L D
Sbjct: 89  VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 39.3 bits (92), Expect = 8e-06
 Identities = 10/36 (27%), Positives = 14/36 (38%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +K   H NI+  +         +I  E   GG L D
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 38.8 bits (91), Expect = 1e-05
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M +  + NI+   G       + +  EY   G L +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 38.8 bits (91), Expect = 1e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +MK+ KH N++   G   R+   +I  E+   G+L D
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 38.9 bits (91), Expect = 1e-05
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++    H NI+   G  L+    +I +E   GG L+ 
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +    +H N++   G   +   L +   YC  G L +
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 38.8 bits (91), Expect = 1e-05
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++K   H NI+   G   +K  ++I ME   GG    
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          ++K  KH NI+     Y      ++ M+   GG L D
Sbjct: 59 VLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD 95

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 38.3 bits (89), Expect = 2e-05
 Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 5/44 (11%)

Query: 6   KHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHTYKI 44
           +H NI  +     R     + +  + MEY   GSL      +  
Sbjct: 65  EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS 108

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 38.3 bits (89), Expect = 2e-05
 Identities = 6/37 (16%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
            M   +H  ++  + ++   +++ +  E+  GG L +
Sbjct: 207 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 243

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 1   MMKDCKHHNIIAYYG--SYLRKDKLWICMEYCGGGSLQD 37
           ++K      I+ Y G      +  L + MEY   G L+D
Sbjct: 77  ILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD 115

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 38.0 bits (89), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++K   H NII  +  +     ++I ME C GG L +
Sbjct: 73  VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLE 109

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          + +  KH NI+  + S   +   ++  +   GG L +
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE 99

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 38.0 bits (89), Expect = 2e-05
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
               KH +I+    +Y     L++  E+  G  L  
Sbjct: 80  CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    H N+I  Y ++  K+ + + MEY  GG L D
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD 175

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 7/37 (18%), Positives = 20/37 (54%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
            +   H +++ ++G +   D +++ +E C   SL ++
Sbjct: 95  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 131

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++ + +H +I+ +YG     D L +  EY   G L  
Sbjct: 70  LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK 106

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++   +H +I+ ++G       L +  EY   G L  
Sbjct: 96  LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++     H NI+   G+        +  EYC  G L +
Sbjct: 79  VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 116

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 37.9 bits (88), Expect = 3e-05
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 1  MMKDCKHHNIIAYYGSY--LRKDKLWICMEYCGGGSLQDI 38
          ++K   H NI+  +            + ME+C  GSL  +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 37.8 bits (88), Expect = 3e-05
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK-LWICMEYCGGGSLQD 37
           +MKD  H N+++  G  LR +    + + Y   G L++
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           MMK   KH NII   G+  +   L++ +EY   G+L++
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 176

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 37.5 bits (88), Expect = 3e-05
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +++ +H NII  +  +  K  + + +E   GG L D
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 97

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +K+ +H N+I  +  Y  K  + + +E   GG L D
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +++   H NII  +  Y  +  + + +E   GG L D
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD 104

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 37.4 bits (87), Expect = 4e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 1   MMKDCKHHNIIAYYG--SYLRKDKLWICMEYCGGGSLQD 37
           ++K  +H NI+ Y G      +  L + MEY   GSL+D
Sbjct: 95  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD 133

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 37.5 bits (87), Expect = 4e-05
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +MK   H NI   Y  Y  +  + + ME C GG L D
Sbjct: 81  LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLD 117

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 37.2 bits (87), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 14/36 (38%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +K   H NI+  +         +I  E   GG L D
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 1   MMKDCKHHNIIAYYG--SYLRKDKLWICMEYCGGGSLQD 37
           +++   H +II Y G         L + MEY   GSL+D
Sbjct: 86  ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD 124

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
            +  +H NI+  + S   +   ++  +   GG L +
Sbjct: 82  CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 117

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 37.2 bits (87), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++   HHN+I  +  Y  +  + + +E   GG L D
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           MMK   KH NII   G+  +   L++ +EY   G+L++
Sbjct: 93  MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 130

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 1   MMKDCKHHNIIAYYG--SYLRKDKLWICMEYCGGGSLQD 37
           ++K  +H NI+ Y G      +  L + MEY   GSL+D
Sbjct: 64  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD 102

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 37.2 bits (87), Expect = 5e-05
 Identities = 7/37 (18%), Positives = 20/37 (54%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI 38
            +   H +++ ++G +   D +++ +E C   SL ++
Sbjct: 69  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 105

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 37.2 bits (87), Expect = 5e-05
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +  +H NI+  + S   +   ++  +   GG L +
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE 94

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 37.0 bits (86), Expect = 5e-05
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    H  +I  + ++  K ++ + +E+  GG L D
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 137

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 36.9 bits (86), Expect = 6e-05
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 1   MMKDCKHHNIIAYYG--SYLRKDKLWICMEYCGGGSLQD 37
           ++++  H NI+ Y G  +    + + + ME+   GSL++
Sbjct: 76  ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE 114

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 36.9 bits (86), Expect = 6e-05
 Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQD 37
           +M+   H N++A  G  L  +    + + Y   G L  
Sbjct: 75  LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ 112

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 36.9 bits (86), Expect = 6e-05
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK-LWICMEYCGGGSLQD 37
           +MKD  H N+++  G  LR +    + + Y   G L++
Sbjct: 79  IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 36.9 bits (86), Expect = 6e-05
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           MM    H +++  YG  +  D+  +  E+   GSL  
Sbjct: 65  MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDT 101

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 36.4 bits (85), Expect = 7e-05
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M +  H  ++  YG   ++  ++I  EY   G L +
Sbjct: 72  VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 36.5 bits (85), Expect = 7e-05
 Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 1  MMKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSL 35
          M+  C+ H N++     +  +D+ ++  E   GGS+
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 36.5 bits (85), Expect = 7e-05
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           MM     H NI+   G+      +++  EYC  G L +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLN 138

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 36.5 bits (85), Expect = 8e-05
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    HHNII   G   +   + I  EY   G+L  
Sbjct: 99  IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 36.6 bits (84), Expect = 8e-05
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 6/43 (13%)

Query: 1   MMKDCKHHNIIAYY------GSYLRKDKLWICMEYCGGGSLQD 37
           +MK   H N+++              D   + MEYC GG L+ 
Sbjct: 65  IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK 107

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 36.5 bits (85), Expect = 9e-05
 Identities = 7/43 (16%), Positives = 14/43 (32%), Gaps = 6/43 (13%)

Query: 1   MMKDCKHHNIIAYYG------SYLRKDKLWICMEYCGGGSLQD 37
            MK+  H ++    G      +  R     + + +   G L  
Sbjct: 78  CMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHA 120

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 36.0 bits (84), Expect = 1e-04
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           M    H  ++ +YG   ++  ++I  EY   G L +
Sbjct: 56 TMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 1  MMKDCKHHNIIAYYGSY--LRKDKLWICMEYCGGGSLQDI 38
          ++K   H NI+  +            + ME+C  GSL  +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 4/48 (8%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK----LWICMEYCGGGSLQDIYHTYKI 44
            +   KH NI+ + G+  R       LW+   +   GSL D      +
Sbjct: 71  SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVV 118

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 2   MKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++  K    +I  +  Y    ++ + +EY  GG +  
Sbjct: 82  LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFS 118

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++ D K+   +   G     D+++I  EY    S+  
Sbjct: 96  IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK 132

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 1   MMKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           ++    HH NII   G+   +  L++ +EY   G+L D
Sbjct: 78  VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 35.8 bits (83), Expect = 1e-04
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    H NII   G   +   + I  EY   GSL  
Sbjct: 99  IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 35.6 bits (83), Expect = 1e-04
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQD 37
           +M   +H N++   G  +  K  L+I  EY   GSL D
Sbjct: 67  VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 35.7 bits (83), Expect = 1e-04
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +++  +H NII     Y     +++  E   GG L D
Sbjct: 69  LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLD 105

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 35.6 bits (83), Expect = 1e-04
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +M    H  ++  YG  L +  + +  E+   G L D
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 7/36 (19%), Positives = 18/36 (50%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +   +H NI+  + S+   ++L +  E+  G  + +
Sbjct: 55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFE 90

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 8/46 (17%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK--------LWICMEYCGGGSLQDI 38
           M K   H NI+ +  +     +          +  E C G  ++ +
Sbjct: 79  MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL 124

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           MMK   KH NII   G+  +   L++ +EY   G+L++
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 5/42 (11%)

Query: 1   MMKDCKHHNIIAYYG-----SYLRKDKLWICMEYCGGGSLQD 37
            MKD  H N+I   G     S     K  + + +   G L  
Sbjct: 89  CMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHT 130

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 1  MMKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +K C+ H NI+  +  +  +   ++ ME   GG L +
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE 95

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 14/37 (37%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    H NII   G   R     I  EY   GSL  
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 1   MMKDCKHHNIIAYYG-SYLRKDKLWICMEYCGGGSLQD 37
           +M   +H N++   G     K  L+I  EY   GSL D
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 35.2 bits (82), Expect = 2e-04
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
               KH +I+  Y  +   + +++ +E C  G +  
Sbjct: 65  HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNR 100

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           K   H N++ +YG     +  ++ +EYC GG L D
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 2  MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           K   H N++ +YG     +  ++ +EYC GG L D
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 34.9 bits (81), Expect = 2e-04
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    +H NI+   G+      + +  EYC  G L +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +MK  +H  ++  +     K+ ++I  E+   GSL D
Sbjct: 236 VMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 271

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 34.6 bits (80), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 2   MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
            +  +H NI+ +    L    L I MEY  GG L +
Sbjct: 70  HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE 105

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 34.4 bits (79), Expect = 4e-04
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 5/37 (13%)

Query: 7   HHNIIAYY-----GSYLRKDKLWICMEYCGGGSLQDI 38
           H +I+  +              +I MEY GG SL+  
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRS 174

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 34.3 bits (79), Expect = 5e-04
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           + +   H +II    SY     +++  +    G L D
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFD 189

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 34.2 bits (79), Expect = 6e-04
 Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 1   MMKD-CKHHNIIAYYGSYLRKDK-LWICMEYCGGGSLQD 37
           ++     H N++   G+  +    L + +E+C  G+L  
Sbjct: 83  ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 121

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 34.1 bits (79), Expect = 6e-04
 Identities = 8/37 (21%), Positives = 19/37 (51%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +    +H NI+  YG +    ++++ +EY   G++  
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 98

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 34.1 bits (78), Expect = 6e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +MK  +H  ++  Y     ++ ++I  EY   GSL D
Sbjct: 315 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLD 350

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 34.1 bits (79), Expect = 6e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
          +MK  +H  ++  Y     ++ ++I  EY   GSL D
Sbjct: 61 LMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 33.8 bits (78), Expect = 6e-04
 Identities = 9/37 (24%), Positives = 14/37 (37%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           + K   H NII    +Y      ++  +    G L D
Sbjct: 77  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFD 113

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 33.7 bits (78), Expect = 7e-04
 Identities = 6/37 (16%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
           +M    + ++    G  L    + +  +    G L D
Sbjct: 70  VMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLD 105

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 33.7 bits (77), Expect = 8e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQD 37
            M+   H +I+   G    ++ +WI ME C  G L+ 
Sbjct: 444 TMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRS 479

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	50
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.54
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.52
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.5
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.4
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.4
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.37
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.37
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.32
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.31
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.31
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.3
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.28
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.24
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.16
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.08
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.03
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.99
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.95
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.95
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.94
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.92
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.92
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.91
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.91
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.91
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.9
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.9
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.89
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.88
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.86
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.85
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.85
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.84
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.84
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.84
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.83
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.83
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.83
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.8
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.8
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.8
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.8
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.8
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.79
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.79
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.79
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.78
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.77
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.77
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.77
3bhy_A	283	Death-associated protein kinase 3; death associate	98.76
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.76
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.76
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.76
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.75
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.75
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.75
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.74
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.73
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.73
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.73
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.72
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.72
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.72
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.72
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.72
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.71
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.7
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.7
3uqc_A	286	Probable conserved transmembrane protein; structur	98.7
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.7
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.69
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.69
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.69
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.69
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.69
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.68
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.68
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.68
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.67
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.67
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.66
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.66
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.65
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.65
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.65
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.65
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.64
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.64
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.63
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.63
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.63
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.62
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.62
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.62
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.61
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.61
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.61
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.58
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.58
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.57
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.57
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.57
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.56
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.56
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.55
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.54
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.54
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.54
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.52
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.52
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.52
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.52
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.51
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.51
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.51
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.5
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.5
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.5
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.49
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.49
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.48
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.48
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.48
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.48
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.48
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.47
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.47
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.45
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.45
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.45
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.44
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.44
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.43
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.42
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.42
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.42
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.42
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.42
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.41
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.41
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.4
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.36
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.35
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.35
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.35
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.34
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.34
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.34
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.33
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.33
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.32
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.32
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.32
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.31
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.3
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.29
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.29
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.29
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.27
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.27
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.27
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.27
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.26
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.26
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.26
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.24
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.24
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.24
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.23
3niz_A	311	Rhodanese family protein; structural genomics, str	98.22
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.22
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.19
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.17
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.17
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.17
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.14
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.14
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.1
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.09
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.03
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.02
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.01
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.01
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.99
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	97.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.95
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	97.92
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	97.92
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	97.89
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.86
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	97.84
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	97.79
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.79
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	97.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.78
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.76
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	97.72
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.72
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.69
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.68
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	97.68
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.68
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	97.62
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.59
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	97.55
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	97.47
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.47
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	97.33
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.33
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	97.28
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.27
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.24
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	97.2
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	97.13
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	97.09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	96.92
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	96.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.78
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	96.75
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	96.7
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	96.65
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	96.42
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.1
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	95.88
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	95.81
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	92.11
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	90.25
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	80.5

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.54  E-value=2.1e-14  Score=64.13  Aligned_cols=47  Identities=23%  Similarity=0.312  Sum_probs=43.2

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +++.++||||+++++.+.+.+.++++|||+++|+|.++++..+.+++
T Consensus       103 il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e  149 (336)
T 4g3f_A          103 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE  149 (336)
T ss_dssp             TTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCH
T ss_pred             HHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCH
Confidence            46789999999999999999999999999999999999998877765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.52  E-value=2.8e-14  Score=63.02  Aligned_cols=47  Identities=17%  Similarity=0.364  Sum_probs=43.1

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +|+.++||||+++++.+.+++.+++++|++++|+|.+++.+.+.+++
T Consensus        79 il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e  125 (304)
T 3ubd_A           79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE  125 (304)
T ss_dssp             CCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCH
T ss_pred             HHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCH
Confidence            46788999999999999999999999999999999999988877765

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.50  E-value=1.2e-14  Score=64.43  Aligned_cols=46  Identities=20%  Similarity=0.356  Sum_probs=42.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++++.+.+.+++++||+++|+|.+++++.+.+++
T Consensus        86 l~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e  131 (311)
T 4aw0_A           86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE  131 (311)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCH
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCH
Confidence            5678999999999999999999999999999999999998877765

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.40  E-value=2e-13  Score=60.15  Aligned_cols=42  Identities=24%  Similarity=0.541  Sum_probs=38.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      |+.++||||+++++++.+++.+++++||+++|+|.++++..+
T Consensus        69 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~  110 (299)
T 4asz_A           69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG  110 (299)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTS
T ss_pred             HHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcC
Confidence            578899999999999999999999999999999999997643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.40  E-value=4.6e-13  Score=60.16  Aligned_cols=42  Identities=36%  Similarity=0.691  Sum_probs=38.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      |+.++||||+++++.+.+.+.++++|||+++|+|.+++...+
T Consensus        77 l~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~  118 (350)
T 4b9d_A           77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQK  118 (350)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTT
T ss_pred             HHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcC
Confidence            567899999999999999999999999999999999997543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.37  E-value=4.4e-13  Score=59.68  Aligned_cols=42  Identities=19%  Similarity=0.430  Sum_probs=38.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      |+.++||||+++++++.+.+.+++++||+++|+|.++++..+
T Consensus        97 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~  138 (329)
T 4aoj_A           97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG  138 (329)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSS
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcC
Confidence            578899999999999999899999999999999999997653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.37  E-value=3.7e-13  Score=59.19  Aligned_cols=46  Identities=24%  Similarity=0.518  Sum_probs=39.1

Q ss_pred             CccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+    ...+++++|++++|+|.+++++.+.+++
T Consensus        79 l~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~  128 (290)
T 3fpq_A           79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI  128 (290)
T ss_dssp             HHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCH
Confidence            567899999999998865    3468999999999999999988777664

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.32  E-value=1.1e-12  Score=58.84  Aligned_cols=45  Identities=40%  Similarity=0.791  Sum_probs=39.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++++.+.+.++++|||+++|+|.+++.. +.+++
T Consensus       125 l~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e  169 (346)
T 4fih_A          125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNE  169 (346)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCH
Confidence            5678999999999999999999999999999999999875 34544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.31  E-value=1.4e-12  Score=59.77  Aligned_cols=45  Identities=40%  Similarity=0.776  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++++.+.+.+|++|||+.+|+|.++++.. .+++
T Consensus       202 l~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~-~l~e  246 (423)
T 4fie_A          202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMNE  246 (423)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS-CCCH
T ss_pred             HHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc-CCCH
Confidence            56789999999999999999999999999999999998753 4443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.31  E-value=6.4e-13  Score=58.76  Aligned_cols=42  Identities=19%  Similarity=0.426  Sum_probs=37.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++||||+++++++..++.+++++||+++|+|.+++....
T Consensus        83 l~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~  124 (308)
T 4gt4_A           83 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS  124 (308)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTC
T ss_pred             HHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhC
Confidence            457899999999999998889999999999999999997543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.30  E-value=2.5e-12  Score=61.66  Aligned_cols=45  Identities=18%  Similarity=0.222  Sum_probs=41.5

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.++||||+.+++++.+.+.++++|||+++|+|..++...+.+++
T Consensus       247 ~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E  291 (689)
T 3v5w_A          247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE  291 (689)
T ss_dssp             SSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCH
T ss_pred             hhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            457899999999999999999999999999999999998888775

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.28  E-value=2.1e-12  Score=56.53  Aligned_cols=45  Identities=24%  Similarity=0.394  Sum_probs=40.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+.+.+++++|++ +|++.+++...+.+++
T Consensus        67 l~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e  111 (275)
T 3hyh_A           67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE  111 (275)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCH
T ss_pred             HHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCH
Confidence            46789999999999999999999999999 5799999988877765

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.24  E-value=1.4e-11  Score=54.38  Aligned_cols=46  Identities=24%  Similarity=0.483  Sum_probs=38.2

Q ss_pred             CccCCCCeeceeceEEEeCC------------EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------------KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------------~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++++...+            .+++++|++.+|+|.+++...+.+++
T Consensus        57 l~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~  114 (299)
T 4g31_A           57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE  114 (299)
T ss_dssp             HTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCCh
Confidence            57789999999999886543            37899999999999999987665543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.16  E-value=1.4e-10  Score=51.17  Aligned_cols=41  Identities=27%  Similarity=0.570  Sum_probs=35.1

Q ss_pred             CccCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +..++||||+++++++..++    .+++++||+++|+|.++++..
T Consensus        51 ~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~   95 (303)
T 3hmm_A           51 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY   95 (303)
T ss_dssp             STTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC
T ss_pred             HhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC
Confidence            45679999999999887653    589999999999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.14  E-value=3.4e-11  Score=53.41  Aligned_cols=45  Identities=31%  Similarity=0.596  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~~   47 (50)
                      ++.++||||+.+++++. .+.+++++||+++|+|.+++... ..+++
T Consensus        86 l~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~  131 (307)
T 3omv_A           86 LRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQM  131 (307)
T ss_dssp             HTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCH
T ss_pred             HHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCH
Confidence            57889999999999764 46689999999999999999754 34443

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.08  E-value=9.1e-11  Score=55.32  Aligned_cols=45  Identities=13%  Similarity=0.296  Sum_probs=38.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~   46 (50)
                      |+.++||||+++++.+.+...+++++|++.+|+|.+++... +.++
T Consensus       208 l~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~  253 (573)
T 3uto_A          208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS  253 (573)
T ss_dssp             HHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEE
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCC
Confidence            56789999999999999999999999999999999988643 3444

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.05  E-value=1.4e-10  Score=54.65  Aligned_cols=46  Identities=15%  Similarity=0.117  Sum_probs=40.7

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.+ .|+|++.+++++.+....|++|||++|++|.+.++..+++++
T Consensus       295 l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~  341 (569)
T 4azs_A          295 LTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDR  341 (569)
T ss_dssp             HHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCH
T ss_pred             HHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCH
Confidence            3455 699999999999999999999999999999999998777654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.03  E-value=3.9e-10  Score=50.69  Aligned_cols=46  Identities=22%  Similarity=0.373  Sum_probs=40.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+.+++.+.+....++++|++++|+|.+++...+.+++
T Consensus        69 l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~  114 (361)
T 2yab_A           69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE  114 (361)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBH
T ss_pred             HHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCH
Confidence            4677899999999999999999999999999999999987666554

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.00  E-value=1.3e-09  Score=49.26  Aligned_cols=46  Identities=26%  Similarity=0.425  Sum_probs=40.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+.+.+.+++++|++.+|+|..++...+.+++
T Consensus        93 l~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~  138 (373)
T 2r5t_A           93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE  138 (373)
T ss_dssp             BCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987666554

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.99  E-value=5.5e-10  Score=49.46  Aligned_cols=46  Identities=24%  Similarity=0.536  Sum_probs=40.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+++++.+.+...+++++|++++|+|..++...+.+++
T Consensus        60 l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~  105 (318)
T 1fot_A           60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN  105 (318)
T ss_dssp             HHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCH
T ss_pred             HhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCH
Confidence            3467899999999999999999999999999999999987766654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.97  E-value=9.5e-10  Score=48.03  Aligned_cols=46  Identities=20%  Similarity=0.333  Sum_probs=40.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+...+..++++|++++++|.+++...+.+++
T Consensus        65 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~  110 (294)
T 4eqm_A           65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV  110 (294)
T ss_dssp             HTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCH
T ss_pred             HhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987766554

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.96  E-value=1.1e-09  Score=49.06  Aligned_cols=46  Identities=17%  Similarity=0.325  Sum_probs=40.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||+|+.+++.+.+...+++++|++++|+|..++...+.+++
T Consensus        95 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~  140 (350)
T 1rdq_E           95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE  140 (350)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCH
T ss_pred             HHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCH
Confidence            4567999999999999999999999999999999999987666654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.95  E-value=6.8e-10  Score=49.34  Aligned_cols=46  Identities=26%  Similarity=0.392  Sum_probs=40.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+.+....++++|+++++++.+++...+.+++
T Consensus        68 l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~  113 (328)
T 3fe3_A           68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE  113 (328)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCH
T ss_pred             HHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999999987666654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.95  E-value=9e-10  Score=49.16  Aligned_cols=46  Identities=24%  Similarity=0.415  Sum_probs=40.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+.+++.+.+.+.+++++|++++|+|..++...+.+++
T Consensus        59 l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~  104 (337)
T 1o6l_A           59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE  104 (337)
T ss_dssp             HHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCH
T ss_pred             HHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987666554

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.94  E-value=3.1e-09  Score=48.69  Aligned_cols=47  Identities=26%  Similarity=0.432  Sum_probs=41.0

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +++.+.|+||+.+++.+...+.+++++|++++++|..++...+.+++
T Consensus       201 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  247 (446)
T 4ejn_A          201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE  247 (446)
T ss_dssp             CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCH
T ss_pred             HHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCH
Confidence            35678899999999999999999999999999999999887666554

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.92  E-value=1.3e-09  Score=50.52  Aligned_cols=46  Identities=24%  Similarity=0.426  Sum_probs=40.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+++++.+......++++|++++|+|.+.+...+.+++
T Consensus       100 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~  145 (504)
T 3q5i_A          100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE  145 (504)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCH
T ss_pred             HHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999998877666554

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.92  E-value=1.3e-09  Score=48.29  Aligned_cols=46  Identities=24%  Similarity=0.402  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+......++++|++++++|.+++...+.+++
T Consensus        68 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  113 (326)
T 2y0a_A           68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE  113 (326)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBH
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCH
Confidence            4567899999999999999999999999999999999987665543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.91  E-value=9.4e-10  Score=49.92  Aligned_cols=46  Identities=15%  Similarity=0.320  Sum_probs=40.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+.+++++.+....+++++++.+|+|..++...+.+++
T Consensus        69 l~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~  114 (384)
T 4fr4_A           69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE  114 (384)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCH
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987666654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.91  E-value=1.2e-09  Score=50.34  Aligned_cols=46  Identities=17%  Similarity=0.251  Sum_probs=40.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+...+..++++|++.+|+|.+.+...+.+++
T Consensus        64 l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e  109 (444)
T 3soa_A           64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE  109 (444)
T ss_dssp             HHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCH
T ss_pred             HHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCH
Confidence            4567999999999999999999999999999999999887766654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.91  E-value=3.7e-09  Score=47.14  Aligned_cols=46  Identities=28%  Similarity=0.693  Sum_probs=40.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+.+++.+......++++|++.+++|.+++...+.+++
T Consensus        85 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  130 (360)
T 3eqc_A           85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE  130 (360)
T ss_dssp             GGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCH
T ss_pred             HHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCH
Confidence            5678999999999999999999999999999999999987655543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.90  E-value=2e-09  Score=49.84  Aligned_cols=46  Identities=28%  Similarity=0.370  Sum_probs=40.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+++++++......++++|++.+|++.+.+.....+++
T Consensus        90 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~  135 (494)
T 3lij_A           90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE  135 (494)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCH
Confidence            4678999999999999999999999999999999998876665543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.90  E-value=1.4e-09  Score=48.79  Aligned_cols=46  Identities=15%  Similarity=0.270  Sum_probs=39.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+......++++|++.++++.+.+.....+++
T Consensus        82 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~  127 (362)
T 2bdw_A           82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE  127 (362)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCH
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999998876655543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.89  E-value=1.5e-09  Score=48.67  Aligned_cols=46  Identities=28%  Similarity=0.406  Sum_probs=40.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+.+....++++|++.+|+|..++...+.+++
T Consensus        70 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  115 (361)
T 3uc3_A           70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE  115 (361)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCH
Confidence            3567899999999999999999999999999999999877666553

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.88  E-value=4.8e-09  Score=45.94  Aligned_cols=40  Identities=28%  Similarity=0.573  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+......++++|++.+++|.++++.
T Consensus        61 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  100 (310)
T 3s95_A           61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS  100 (310)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH
T ss_pred             HHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHh
Confidence            4578899999999999999999999999999999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.86  E-value=3.7e-09  Score=47.59  Aligned_cols=41  Identities=27%  Similarity=0.566  Sum_probs=37.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+......++++|++.++++.+++...
T Consensus        80 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B           80 SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHT
T ss_pred             HHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhh
Confidence            45678999999999999999999999999999999998764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.85  E-value=1.2e-09  Score=48.41  Aligned_cols=46  Identities=26%  Similarity=0.403  Sum_probs=39.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+...+..++++|++.+++|..++...+.+++
T Consensus        75 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  120 (327)
T 3a62_A           75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME  120 (327)
T ss_dssp             HHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCH
T ss_pred             HHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCH
Confidence            3567899999999999999999999999999999999887665543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.85  E-value=4.3e-09  Score=48.53  Aligned_cols=46  Identities=28%  Similarity=0.388  Sum_probs=40.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+++++.+......++++|++.++++.+.+...+.+++
T Consensus        80 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  125 (484)
T 3nyv_A           80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE  125 (484)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBH
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCH
Confidence            4678999999999999999999999999999999999887666554

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.85  E-value=3.5e-09  Score=46.87  Aligned_cols=41  Identities=20%  Similarity=0.326  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.||||+++++.+.+....++++|++++++|.+.+...
T Consensus        55 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~   95 (321)
T 1tki_A           55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS   95 (321)
T ss_dssp             HHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSS
T ss_pred             HHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhc
Confidence            45678999999999999999999999999999999998754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.84  E-value=2e-09  Score=50.00  Aligned_cols=46  Identities=26%  Similarity=0.409  Sum_probs=40.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+++++.+.+....++++|++++++|.+++...+.+++
T Consensus        70 l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~  115 (476)
T 2y94_A           70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE  115 (476)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            4578899999999999999999999999999999999987666554

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.84  E-value=3.4e-09  Score=48.80  Aligned_cols=45  Identities=18%  Similarity=0.330  Sum_probs=38.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh-cCCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT-YKIFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~   47 (50)
                      ..+.|+||+.+++++.+...+++++|++++|+|..++.. .+.+++
T Consensus       129 ~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e  174 (437)
T 4aw2_A          129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE  174 (437)
T ss_dssp             HHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCH
T ss_pred             HhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCH
Confidence            457899999999999999999999999999999999976 344543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.84  E-value=4.2e-09  Score=45.46  Aligned_cols=46  Identities=30%  Similarity=0.592  Sum_probs=39.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+......++++|++.++++.+.+...+.+++
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  105 (277)
T 3f3z_A           60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE  105 (277)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCH
T ss_pred             HHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCH
Confidence            4567899999999999999999999999999999998877665543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.83  E-value=5.9e-10  Score=50.26  Aligned_cols=41  Identities=20%  Similarity=0.421  Sum_probs=33.6

Q ss_pred             CccCC-CCeeceeceEEEeC-CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCK-HHNIIAYYGSYLRK-DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~-h~~i~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      |+.+. ||||+++++++... ..+++++||+++|+|.++++..
T Consensus       121 l~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             HHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             HHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence            34554 59999999988654 5689999999999999999754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.83  E-value=3e-09  Score=47.57  Aligned_cols=42  Identities=19%  Similarity=0.433  Sum_probs=37.9

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +||||+++++++.+...+++++|++++|+|..++...+.+++
T Consensus        68 ~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~  109 (345)
T 3a8x_A           68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE  109 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCH
T ss_pred             CCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            799999999999999999999999999999999987666654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.83  E-value=4.2e-09  Score=46.67  Aligned_cols=44  Identities=25%  Similarity=0.392  Sum_probs=38.7

Q ss_pred             cCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          4 DCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         4 ~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .+. |+||+++++.+.+....++++|++.+++|.+++...+.+++
T Consensus        61 ~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  105 (325)
T 3kn6_A           61 LCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSE  105 (325)
T ss_dssp             HTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCH
T ss_pred             HhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCH
Confidence            454 99999999999999999999999999999999988766654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.80  E-value=3.9e-09  Score=48.76  Aligned_cols=46  Identities=26%  Similarity=0.339  Sum_probs=40.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+++++.+......++++|++.++++...+...+.+++
T Consensus        75 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  120 (486)
T 3mwu_A           75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE  120 (486)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999998876666554

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.80  E-value=6.4e-09  Score=47.01  Aligned_cols=38  Identities=21%  Similarity=0.317  Sum_probs=34.3

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      +.+ +|+||+.+++++.+.+.+++++|++++|+|.++++
T Consensus        74 ~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           74 TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN  112 (361)
T ss_dssp             HHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT
T ss_pred             HHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc
Confidence            344 69999999999999999999999999999999885

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.80  E-value=1.4e-08  Score=45.53  Aligned_cols=43  Identities=26%  Similarity=0.489  Sum_probs=38.3

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..||||+++++.+.+...+++++|++++|+|..++...+.+++
T Consensus        75 ~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~  117 (345)
T 1xjd_A           75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL  117 (345)
T ss_dssp             TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             CCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            3899999999999999999999999999999999987666554

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.80  E-value=9e-09  Score=45.09  Aligned_cols=41  Identities=46%  Similarity=0.864  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.||||+++++.+...+..++++|++.+++|.+++...
T Consensus        71 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  111 (297)
T 3fxz_A           71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET  111 (297)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS
T ss_pred             HhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc
Confidence            35678999999999999999999999999999999998764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.80  E-value=5.1e-09  Score=46.79  Aligned_cols=46  Identities=20%  Similarity=0.248  Sum_probs=39.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+......++++|++.++++.+++...+.+++
T Consensus       102 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  147 (349)
T 2w4o_A          102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE  147 (349)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCH
T ss_pred             HHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCH
Confidence            3567899999999999999999999999999999999887655543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.79  E-value=4.7e-09  Score=48.05  Aligned_cols=45  Identities=20%  Similarity=0.361  Sum_probs=38.7

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC-CCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK-IFPL   47 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~   47 (50)
                      ..+.|++|+.+++++.+...+++++|++++|+|..++...+ .+++
T Consensus       116 ~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~  161 (412)
T 2vd5_A          116 VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA  161 (412)
T ss_dssp             HHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCH
T ss_pred             HhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCH
Confidence            45689999999999999999999999999999999997643 4443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.79  E-value=1.4e-08  Score=46.34  Aligned_cols=42  Identities=19%  Similarity=0.433  Sum_probs=38.2

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +||||+.+++++.+...+++++|++++|+|..++...+.+++
T Consensus       111 ~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~  152 (396)
T 4dc2_A          111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE  152 (396)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             CCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCH
Confidence            799999999999999999999999999999999987766654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.79  E-value=3.6e-09  Score=48.38  Aligned_cols=41  Identities=22%  Similarity=0.474  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++++.+...+++++|++++|+|..+++..
T Consensus       123 l~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~  163 (410)
T 3v8s_A          123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY  163 (410)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC
Confidence            34578999999999999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.78  E-value=9.9e-09  Score=46.13  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=37.9

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++|+.+++++.+.+.+++++|++++|+|..++...+.+++
T Consensus        79 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~  120 (353)
T 2i0e_A           79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE  120 (353)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCH
Confidence            799999999999999999999999999999999987666654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.77  E-value=9e-09  Score=46.01  Aligned_cols=40  Identities=20%  Similarity=0.306  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+.....+++++|++.+++|...+..
T Consensus        80 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~  119 (351)
T 3c0i_A           80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK  119 (351)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHH
Confidence            4567899999999999999999999999999999877753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.77  E-value=2.1e-08  Score=44.88  Aligned_cols=42  Identities=29%  Similarity=0.392  Sum_probs=37.8

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .||||+.+++.+.+....++++|++.+|++.+.+...+.+++
T Consensus        74 ~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~  115 (342)
T 2qr7_A           74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE  115 (342)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCH
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            799999999999999999999999999999999987666654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.77  E-value=1.7e-08  Score=45.33  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=38.1

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|+||+.+++++.+...+++++|++.+|+|..++...+.+++
T Consensus        82 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~  123 (353)
T 3txo_A           82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE  123 (353)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCH
Confidence            699999999999999999999999999999999987766654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.76  E-value=7.8e-09  Score=44.69  Aligned_cols=46  Identities=22%  Similarity=0.388  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+|++++++.+......++++|+++++++.+++.....+++
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  107 (283)
T 3bhy_A           62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE  107 (283)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCH
Confidence            3467899999999999999999999999999999999976655543

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.76  E-value=1.6e-09  Score=49.51  Aligned_cols=45  Identities=24%  Similarity=0.417  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++.+...      ..+++++|++. |+|..++...+.+++
T Consensus       107 l~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~  157 (398)
T 4b99_A          107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTL  157 (398)
T ss_dssp             HHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCH
T ss_pred             HHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCH
Confidence            5678999999999876543      57899999996 689999987777665

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.76  E-value=1.1e-08  Score=44.11  Aligned_cols=46  Identities=26%  Similarity=0.382  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+......++++|++.+++|.+++...+.+++
T Consensus        65 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  110 (276)
T 2h6d_A           65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE  110 (276)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCH
T ss_pred             HhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCH
Confidence            3567899999999999999999999999999999999877655543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.76  E-value=1.1e-08  Score=44.54  Aligned_cols=46  Identities=17%  Similarity=0.418  Sum_probs=39.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+...+..++++|++.++++.+++.....+++
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  114 (294)
T 2rku_A           69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE  114 (294)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCH
T ss_pred             HHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCH
Confidence            3567899999999999999999999999999999998877655543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.75  E-value=5.2e-09  Score=46.10  Aligned_cols=45  Identities=22%  Similarity=0.448  Sum_probs=39.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|+|++.+++.+......++++|++++++|.+++...+.++
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  113 (321)
T 2a2a_A           69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS  113 (321)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEE
T ss_pred             HHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCC
Confidence            356789999999999999999999999999999999998665543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.75  E-value=1.1e-08  Score=44.94  Aligned_cols=46  Identities=9%  Similarity=0.067  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+...+..++++|++.+++|.+++...+.+++
T Consensus        88 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  133 (309)
T 2h34_A           88 AGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAP  133 (309)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCH
T ss_pred             HhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999999987665543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.75  E-value=1e-08  Score=45.51  Aligned_cols=46  Identities=17%  Similarity=0.418  Sum_probs=39.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+...+..++++|++.++++.+++.....+++
T Consensus        95 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~  140 (335)
T 2owb_A           95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE  140 (335)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCH
T ss_pred             HHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCH
Confidence            3567899999999999999999999999999999998877655543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.74  E-value=1.8e-09  Score=47.79  Aligned_cols=46  Identities=28%  Similarity=0.526  Sum_probs=39.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+......++++|+++++++.+++.....+++
T Consensus        59 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  104 (323)
T 3tki_A           59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE  104 (323)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCH
T ss_pred             HHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCH
Confidence            3567899999999999999999999999999999988876555543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.73  E-value=1e-08  Score=44.83  Aligned_cols=46  Identities=24%  Similarity=0.421  Sum_probs=39.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+......++++|+++++++.+.+...+.+++
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  105 (304)
T 2jam_A           60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTE  105 (304)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCH
T ss_pred             HHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCH
Confidence            3567899999999999999999999999999999998876655543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.73  E-value=4.7e-09  Score=45.49  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=37.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+||+.+++.+...+..++++|++.+++|.+++...+
T Consensus        66 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  107 (289)
T 4fvq_A           66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK  107 (289)
T ss_dssp             HHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTG
T ss_pred             HHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCC
Confidence            456789999999999998888999999999999999997653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.73  E-value=1.3e-08  Score=46.21  Aligned_cols=41  Identities=22%  Similarity=0.373  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+.+++.+......++++|++.+++|.+++...
T Consensus       102 l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~  142 (387)
T 1kob_A          102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE  142 (387)
T ss_dssp             HTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCT
T ss_pred             HHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhh
Confidence            46789999999999999999999999999999999988754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.72  E-value=8.1e-09  Score=46.56  Aligned_cols=42  Identities=29%  Similarity=0.411  Sum_probs=37.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+||+++++.+......++++|++++++|.+++...+
T Consensus       100 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~  141 (373)
T 2qol_A          100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD  141 (373)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             HHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCC
Confidence            467899999999999988889999999999999999997643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.72  E-value=4.8e-09  Score=47.23  Aligned_cols=41  Identities=29%  Similarity=0.514  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+...+..++++|++++|++.++++..
T Consensus       166 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  206 (377)
T 3cbl_A          166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE  206 (377)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             HHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhc
Confidence            46789999999999998888899999999999999998754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.72  E-value=1.2e-08  Score=43.72  Aligned_cols=42  Identities=17%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+||+++++.+...  ...++++|++++++|.+++....
T Consensus        61 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  104 (271)
T 3kmu_A           61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT  104 (271)
T ss_dssp             GCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCS
T ss_pred             HHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcc
Confidence            5677899999999988776  77899999999999999998654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.72  E-value=1.1e-08  Score=44.27  Aligned_cols=46  Identities=20%  Similarity=0.418  Sum_probs=39.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+.+++.+......++++|+++++++...+.....+++
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~  108 (279)
T 3fdn_A           63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE  108 (279)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCH
T ss_pred             HHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            4567899999999999999999999999999999998877655543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.72  E-value=8.2e-09  Score=44.73  Aligned_cols=46  Identities=17%  Similarity=0.397  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+......++++|+++++++.+.+...+.+++
T Consensus        68 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  113 (284)
T 2vgo_A           68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE  113 (284)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCH
T ss_pred             HhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCH
Confidence            3567899999999999999999999999999999999887655543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.71  E-value=5e-08  Score=42.79  Aligned_cols=43  Identities=21%  Similarity=0.406  Sum_probs=38.0

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ..|+||+++++.+...+..++++|++.++++.+++.....+++
T Consensus        68 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  110 (316)
T 2ac3_A           68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE  110 (316)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             cCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCH
Confidence            4799999999999999999999999999999999987665553

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.70  E-value=7.2e-09  Score=46.65  Aligned_cols=42  Identities=31%  Similarity=0.573  Sum_probs=37.0

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+ +|+||+++++.+...+.+++++|++.+|+|.+++....
T Consensus       140 l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  182 (370)
T 2psq_A          140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR  182 (370)
T ss_dssp             HHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             HHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhC
Confidence            3456 79999999999998889999999999999999998654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.70  E-value=1.1e-08  Score=44.67  Aligned_cols=43  Identities=26%  Similarity=0.488  Sum_probs=37.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      ++.++|+||+++++.+......++++|++.+++|.+++.....
T Consensus        80 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  122 (314)
T 2ivs_A           80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK  122 (314)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTT
T ss_pred             HhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhh
Confidence            4567899999999999888899999999999999999986543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.70  E-value=1.6e-08  Score=44.26  Aligned_cols=40  Identities=18%  Similarity=0.262  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+||+++++.+...+..++++|++.+++|.++++.
T Consensus        85 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~  124 (286)
T 3uqc_A           85 LSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT  124 (286)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT
T ss_pred             HhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc
Confidence            3567899999999999999999999999999999999864

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.70  E-value=1.5e-08  Score=48.20  Aligned_cols=42  Identities=17%  Similarity=0.264  Sum_probs=37.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+||+.+++.+.+...+++++|++++|+|..++...+
T Consensus       238 L~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~  279 (576)
T 2acx_A          238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG  279 (576)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSS
T ss_pred             HHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcC
Confidence            456789999999999999999999999999999999987644

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.69  E-value=4e-08  Score=43.37  Aligned_cols=42  Identities=26%  Similarity=0.490  Sum_probs=37.3

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+ .|+||+++++.+...+..++++|++++++|.+++....
T Consensus        79 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  121 (327)
T 1fvr_A           79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR  121 (327)
T ss_dssp             HTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTC
T ss_pred             HHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcc
Confidence            3566 89999999999999999999999999999999997653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.69  E-value=3.8e-08  Score=43.84  Aligned_cols=46  Identities=20%  Similarity=0.249  Sum_probs=39.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCC-ChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGG-SLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+......+++++++..| ++..++.....+++
T Consensus        83 l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~  129 (335)
T 3dls_A           83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE  129 (335)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCH
T ss_pred             HHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCH
Confidence            45678999999999999999999999998766 99999887666553

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.69  E-value=6e-08  Score=42.21  Aligned_cols=40  Identities=45%  Similarity=0.952  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+||+++++.+...+..++++|++++++|.+++..
T Consensus        67 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             CCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHH
T ss_pred             HhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHH
Confidence            5677899999999999988999999999999999998864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.69  E-value=1.2e-08  Score=45.21  Aligned_cols=39  Identities=36%  Similarity=0.606  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+++++.+...+..++++|++++|+|.+++.
T Consensus        82 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A           82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEE
T ss_pred             HHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHH
Confidence            456789999999999999999999999999999999885

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.69  E-value=1.7e-08  Score=43.66  Aligned_cols=46  Identities=15%  Similarity=0.270  Sum_probs=39.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+......++++|++.++++...+.....+++
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~  104 (284)
T 3kk8_A           59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE  104 (284)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCH
T ss_pred             HHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCH
Confidence            3567899999999999999999999999999999888876655543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.68  E-value=2.3e-08  Score=45.16  Aligned_cols=41  Identities=32%  Similarity=0.553  Sum_probs=36.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+...+..++++|++++++|.+.+...
T Consensus       140 l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~  180 (373)
T 2x4f_A          140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE  180 (373)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHT
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhc
Confidence            46789999999999999999999999999999998887643

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.68  E-value=1.6e-08  Score=45.25  Aligned_cols=45  Identities=27%  Similarity=0.388  Sum_probs=38.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+.+....++++|++ +|++.+++...+.+++
T Consensus        63 l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~  107 (336)
T 3h4j_B           63 LKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTE  107 (336)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCH
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCH
Confidence            46788999999999999999999999999 5789888876666554

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.68  E-value=6.8e-09  Score=45.58  Aligned_cols=46  Identities=30%  Similarity=0.385  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+....    ..++++|++.+++|.+++...+.+++
T Consensus        66 l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~  115 (311)
T 3ork_A           66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP  115 (311)
T ss_dssp             CCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCH
T ss_pred             HHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCH
Confidence            56789999999998876543    35899999999999999987665543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.67  E-value=1.1e-08  Score=45.33  Aligned_cols=41  Identities=34%  Similarity=0.396  Sum_probs=36.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++.+......++++|++.+++|.++++..
T Consensus       104 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  144 (325)
T 3kul_A          104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH  144 (325)
T ss_dssp             HTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTT
T ss_pred             HHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhc
Confidence            46788999999999998888899999999999999998654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.67  E-value=1e-08  Score=47.70  Aligned_cols=41  Identities=29%  Similarity=0.489  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      |+.++|+||+++++.+......++++|++.+|+|.++++..
T Consensus       270 l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  310 (495)
T 1opk_A          270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC  310 (495)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS
T ss_pred             HHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhc
Confidence            45678999999999998888999999999999999999764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.66  E-value=5.6e-08  Score=42.69  Aligned_cols=24  Identities=25%  Similarity=0.389  Sum_probs=20.1

Q ss_pred             EEEEEEeccCCCChHHHHhhcCCC
Q psy13313         22 KLWICMEYCGGGSLQDIYHTYKIF   45 (50)
Q Consensus        22 ~~~l~~~~~~~~~l~~~~~~~~~~   45 (50)
                      ..++++|++.+++|.+++......
T Consensus       135 ~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B          135 YLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             EEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             eEEEEEEecCCCCHHHHHhcccCc
Confidence            389999999999999999875543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.66  E-value=5.6e-08  Score=41.92  Aligned_cols=37  Identities=32%  Similarity=0.749  Sum_probs=34.4

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .|+||+++++.+...+..++++|++++++|.+++...
T Consensus        69 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  105 (289)
T 1x8b_A           69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN  105 (289)
T ss_dssp             SCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHH
T ss_pred             CCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhh
Confidence            8999999999999999999999999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.65  E-value=2.1e-08  Score=43.16  Aligned_cols=41  Identities=24%  Similarity=0.484  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+......++++|+++++++.+++...
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   99 (269)
T 4hcu_A           59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ   99 (269)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTT
T ss_pred             HHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhc
Confidence            45678999999999998888999999999999999998654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.65  E-value=1.5e-08  Score=44.79  Aligned_cols=41  Identities=20%  Similarity=0.381  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+......++++|++++++|.+++...
T Consensus       104 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A          104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHh
Confidence            45678999999999998888999999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.65  E-value=3.8e-08  Score=42.78  Aligned_cols=45  Identities=24%  Similarity=0.509  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.++|+||+++++.+..    ....++++|++++++|.+++...+.++
T Consensus        79 l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  127 (290)
T 1t4h_A           79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK  127 (290)
T ss_dssp             HTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCC
T ss_pred             HHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCC
Confidence            457889999999998765    356899999999999999998765554

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.65  E-value=1.3e-07  Score=41.81  Aligned_cols=41  Identities=29%  Similarity=0.590  Sum_probs=34.9

Q ss_pred             CccCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+....    .+++++|++++|+|.++++..
T Consensus        72 l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  116 (322)
T 3soc_A           72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN  116 (322)
T ss_dssp             STTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC
T ss_pred             HhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc
Confidence            56789999999999887643    479999999999999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.64  E-value=1.2e-08  Score=44.99  Aligned_cols=42  Identities=33%  Similarity=0.511  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+||+++++.+......++++|++.+++|.+++...+
T Consensus        88 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  129 (309)
T 3p86_A           88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG  129 (309)
T ss_dssp             HHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTT
T ss_pred             HHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcC
Confidence            456789999999999998889999999999999999987543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.64  E-value=1e-08  Score=46.06  Aligned_cols=42  Identities=24%  Similarity=0.445  Sum_probs=37.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+||+.+++.+......++++|++.+|+|.+++...+
T Consensus       128 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  169 (367)
T 3l9p_A          128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR  169 (367)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHS
T ss_pred             HHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhc
Confidence            356789999999999988888999999999999999998654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.63  E-value=3.9e-08  Score=42.47  Aligned_cols=41  Identities=17%  Similarity=0.437  Sum_probs=36.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+...+..++++|+++++++..++...
T Consensus        65 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  105 (278)
T 3cok_A           65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR  105 (278)
T ss_dssp             HTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTC
T ss_pred             HHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhc
Confidence            45678999999999999999999999999999999998764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.63  E-value=2.5e-08  Score=43.40  Aligned_cols=44  Identities=18%  Similarity=0.261  Sum_probs=37.8

Q ss_pred             cC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          4 DC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .+ .|+|++++++.+......++++|++.+++|.+++.....+++
T Consensus        79 ~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  123 (298)
T 1phk_A           79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE  123 (298)
T ss_dssp             HHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             HhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCH
Confidence            44 499999999999999999999999999999999987655543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.63  E-value=6.9e-08  Score=42.74  Aligned_cols=40  Identities=43%  Similarity=0.882  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++.+++.+...+..++++|+++++++.+++..
T Consensus        96 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  135 (321)
T 2c30_A           96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ  135 (321)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT
T ss_pred             HHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh
Confidence            4567899999999999999999999999999999998764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.62  E-value=4.6e-08  Score=42.56  Aligned_cols=40  Identities=30%  Similarity=0.567  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+......++++|++.++++.+.+..
T Consensus        74 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (285)
T 3is5_A           74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS  113 (285)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHH
T ss_pred             HHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHh
Confidence            4567899999999999999999999999999999988753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.62  E-value=3.7e-08  Score=45.34  Aligned_cols=42  Identities=29%  Similarity=0.520  Sum_probs=36.0

Q ss_pred             CccCCCCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      |+.++|+||+++++.+.... ..++++|++++|+|.++++..+
T Consensus       240 l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  282 (450)
T 1k9a_A          240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG  282 (450)
T ss_dssp             HHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHC
T ss_pred             HHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcC
Confidence            46789999999999876654 7999999999999999998654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.62  E-value=2.1e-08  Score=43.89  Aligned_cols=46  Identities=26%  Similarity=0.504  Sum_probs=39.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+......++++|++.++++..++...+.+++
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~  101 (311)
T 4agu_A           56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE  101 (311)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCH
T ss_pred             HHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCH
Confidence            3567899999999999999999999999999999888876655543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.61  E-value=4.5e-08  Score=43.14  Aligned_cols=41  Identities=15%  Similarity=0.278  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+......++++|++.++++.+++...
T Consensus        81 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 3uim_A           81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER  121 (326)
T ss_dssp             GGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCC
T ss_pred             HHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhc
Confidence            46678999999999999888899999999999999998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.61  E-value=4.7e-08  Score=42.48  Aligned_cols=46  Identities=26%  Similarity=0.339  Sum_probs=38.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+......++++|++.++++.+.+.....+++
T Consensus        75 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  120 (287)
T 2wei_A           75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE  120 (287)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCH
T ss_pred             HHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCH
Confidence            3567899999999999999999999999999999888876555543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.61  E-value=7.3e-08  Score=42.72  Aligned_cols=45  Identities=20%  Similarity=0.356  Sum_probs=38.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+......++++|++. +++.+++.....+++
T Consensus        87 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~  131 (329)
T 3gbz_A           87 LKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSM  131 (329)
T ss_dssp             GGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTTCCH
T ss_pred             HHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCCCCH
Confidence            567899999999999999999999999998 599999887665543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.58  E-value=1.4e-08  Score=43.70  Aligned_cols=45  Identities=29%  Similarity=0.558  Sum_probs=37.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|+|++++++.+......++++|++.++++.+++.....++
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~  103 (276)
T 2yex_A           59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP  103 (276)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCC
T ss_pred             HHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCC
Confidence            346789999999999999999999999999999988877554444

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.58  E-value=2.6e-08  Score=43.14  Aligned_cols=40  Identities=23%  Similarity=0.523  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+||+++++.+......++++|++.++++.+++..
T Consensus        73 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  112 (283)
T 3gen_A           73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE  112 (283)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHC
T ss_pred             HhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHH
Confidence            3567899999999999888899999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.57  E-value=4.9e-08  Score=43.74  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=37.2

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++|+.+++.+......++++|++.+++|.+++.....+++
T Consensus       117 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  158 (355)
T 1vzo_A          117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE  158 (355)
T ss_dssp             TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCH
T ss_pred             CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCH
Confidence            699999999999999999999999999999999987665543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.57  E-value=4.5e-08  Score=43.03  Aligned_cols=40  Identities=20%  Similarity=0.370  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+||+++++.+......++++|++.+++|.+++..
T Consensus        82 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A           82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             GGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             HHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHH
Confidence            5678999999999999888889999999999999998865

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.57  E-value=6.1e-08  Score=42.52  Aligned_cols=42  Identities=21%  Similarity=0.490  Sum_probs=37.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+|++++++.+......++++|++.+++|.+++...+
T Consensus        83 l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~  124 (319)
T 2y4i_B           83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK  124 (319)
T ss_dssp             GTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSC
T ss_pred             HhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcC
Confidence            456789999999999999899999999999999999987643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.56  E-value=6.9e-08  Score=45.71  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++.+.+...+++++|++.+|+|..++...
T Consensus       239 L~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~  279 (543)
T 3c4z_A          239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV  279 (543)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTS
T ss_pred             HHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHh
Confidence            45678999999999999999999999999999999998754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.56  E-value=8.5e-08  Score=42.03  Aligned_cols=40  Identities=48%  Similarity=1.142  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+......++++|++.++++.+++..
T Consensus        78 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  117 (314)
T 3com_A           78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL  117 (314)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH
T ss_pred             HHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHh
Confidence            3567899999999999999999999999999999998863

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.55  E-value=4.1e-08  Score=42.24  Aligned_cols=41  Identities=22%  Similarity=0.501  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+......++++|+++++++.+++...
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~   97 (268)
T 3sxs_A           57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH   97 (268)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHc
Confidence            34678999999999998888999999999999999998764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.54  E-value=1.1e-07  Score=41.48  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=34.0

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+...  ...++++|++++++|.+++...
T Consensus        77 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  119 (302)
T 4e5w_A           77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN  119 (302)
T ss_dssp             HHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHH
T ss_pred             HHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhc
Confidence            4567899999999988766  6689999999999999998543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.54  E-value=6.4e-08  Score=42.14  Aligned_cols=45  Identities=16%  Similarity=0.213  Sum_probs=37.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+|++++++.+ ..+..++++|++.+++|.+++...+.+++
T Consensus        72 l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  116 (291)
T 1xbb_A           72 MQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD  116 (291)
T ss_dssp             HHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCH
T ss_pred             HHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCH
Confidence            3567899999999988 56678899999999999999987665543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.54  E-value=2.7e-08  Score=44.10  Aligned_cols=41  Identities=22%  Similarity=0.494  Sum_probs=36.2

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+ .||||+++++.+...+..++++|++++|+|.+++....
T Consensus       103 ~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A          103 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             HhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhcc
Confidence            455 79999999999988889999999999999999997643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.52  E-value=5.2e-08  Score=41.81  Aligned_cols=41  Identities=24%  Similarity=0.466  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+...+..++++|+++++++.+++...
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   97 (267)
T 3t9t_A           57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ   97 (267)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHT
T ss_pred             HHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhC
Confidence            35678999999999998888899999999999999998764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.52  E-value=3.6e-08  Score=43.53  Aligned_cols=42  Identities=26%  Similarity=0.457  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+||+++++.+......++++|++++++|.+++....
T Consensus        87 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  128 (327)
T 2yfx_A           87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR  128 (327)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTS
T ss_pred             HhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhc
Confidence            346789999999999988888999999999999999998654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.52  E-value=7.7e-08  Score=41.77  Aligned_cols=41  Identities=37%  Similarity=0.554  Sum_probs=36.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+...+..++++|+++++++.+++...
T Consensus        73 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (295)
T 2clq_A           73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK  113 (295)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHT
T ss_pred             HHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhh
Confidence            35678999999999999999999999999999999998764

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.52  E-value=6.2e-08  Score=41.99  Aligned_cols=42  Identities=29%  Similarity=0.484  Sum_probs=37.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+|++.+++.+......++++|++.++++.+++....
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~  104 (288)
T 3kfa_A           63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN  104 (288)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCC
T ss_pred             HHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcc
Confidence            356789999999999988889999999999999999997643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.51  E-value=5.8e-08  Score=46.48  Aligned_cols=45  Identities=16%  Similarity=0.188  Sum_probs=37.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+++++.+.. +..++++|++.+|+|.++++..+.+++
T Consensus       424 l~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~  468 (635)
T 4fl3_A          424 MQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKD  468 (635)
T ss_dssp             HHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCH
T ss_pred             HHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCH
Confidence            456789999999998864 558899999999999999987665543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.51  E-value=5.6e-08  Score=43.03  Aligned_cols=45  Identities=16%  Similarity=0.305  Sum_probs=37.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      ++.+.|+||+.+++.+......++++|++.++++..+......++
T Consensus        78 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~  122 (331)
T 4aaa_A           78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLD  122 (331)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCC
T ss_pred             HhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCC
Confidence            356789999999999999999999999999988888766554444

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.51  E-value=5.6e-08  Score=43.18  Aligned_cols=41  Identities=29%  Similarity=0.439  Sum_probs=36.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+......++++|++.+++|.+++...
T Consensus       100 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  140 (333)
T 1mqb_A          100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK  140 (333)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHT
T ss_pred             HHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhC
Confidence            35678999999999998888999999999999999998754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.50  E-value=2.1e-07  Score=40.79  Aligned_cols=40  Identities=30%  Similarity=0.643  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+...+..++++|++.+++|.+++..
T Consensus        86 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  125 (310)
T 2wqm_A           86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH  125 (310)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHH
Confidence            3567899999999999999999999999999999998864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.50  E-value=1.1e-07  Score=41.39  Aligned_cols=44  Identities=23%  Similarity=0.443  Sum_probs=34.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh-cCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT-YKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~   46 (50)
                      ++.++|+||+++++.+......++++|++.+ ++...+.. .+.++
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~   99 (292)
T 3o0g_A           55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLD   99 (292)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCC
T ss_pred             HhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCC
Confidence            4578899999999999999999999999986 55554443 34444

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.50  E-value=3.7e-08  Score=44.44  Aligned_cols=41  Identities=29%  Similarity=0.557  Sum_probs=36.4

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+ +|+||+++++.+...+..++++|++.+|+|.+++....
T Consensus       129 ~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  170 (382)
T 3tt0_A          129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR  170 (382)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             HHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhc
Confidence            345 79999999999998889999999999999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.49  E-value=7.5e-08  Score=42.42  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=34.8

Q ss_pred             CccCCCCeeceeceEEEeCC--EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD--KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~--~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+....  ..++++|++.+++|.+++...
T Consensus        61 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  103 (319)
T 4euu_A           61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP  103 (319)
T ss_dssp             HHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSG
T ss_pred             HHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHh
Confidence            45678999999999887654  789999999999999998754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.49  E-value=5.9e-08  Score=42.77  Aligned_cols=45  Identities=27%  Similarity=0.310  Sum_probs=36.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.|+||+++++.+.... .++++|++.++++.+.+.....+++
T Consensus        69 l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~  113 (322)
T 2ycf_A           69 LKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKE  113 (322)
T ss_dssp             HHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCH
T ss_pred             HHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCH
Confidence            35678999999999876654 8999999999999998876655543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.48  E-value=2.8e-08  Score=43.81  Aligned_cols=41  Identities=15%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+...+..++++|++.+++|.+++...
T Consensus        89 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  129 (321)
T 2qkw_B           89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS  129 (321)
T ss_dssp             GGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSS
T ss_pred             HHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhcc
Confidence            56788999999999998888999999999999998887643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.48  E-value=9.7e-08  Score=42.96  Aligned_cols=41  Identities=20%  Similarity=0.306  Sum_probs=36.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      .|+||+.+++.+......++++|++.++++.+++.....++
T Consensus       158 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~  198 (365)
T 2y7j_A          158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS  198 (365)
T ss_dssp             TCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCC
T ss_pred             CCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCC
Confidence            79999999999999999999999999999999987655554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.48  E-value=4.9e-08  Score=43.25  Aligned_cols=41  Identities=29%  Similarity=0.552  Sum_probs=36.1

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+ .|+||+++++.+...+..++++|++.+++|.+++....
T Consensus        95 ~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  136 (334)
T 2pvf_A           95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARR  136 (334)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTS
T ss_pred             HHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhc
Confidence            345 79999999999988889999999999999999998654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.48  E-value=2.3e-07  Score=42.01  Aligned_cols=43  Identities=26%  Similarity=0.501  Sum_probs=35.5

Q ss_pred             CCccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          1 MMKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +++.++|+||+++++.+.. .+..++++|++.+++|.++++...
T Consensus       143 il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  186 (373)
T 3c1x_A          143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET  186 (373)
T ss_dssp             TSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTT
T ss_pred             HHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcc
Confidence            4677899999999997644 457889999999999999997543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.48  E-value=1.6e-07  Score=44.83  Aligned_cols=40  Identities=25%  Similarity=0.419  Sum_probs=34.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      |+.++|+||+++++.+.. +..++++|++.+|+|.+++...
T Consensus       390 l~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~  429 (613)
T 2ozo_A          390 MHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGK  429 (613)
T ss_dssp             HTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTC
T ss_pred             HHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhc
Confidence            567899999999998865 5689999999999999998653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.47  E-value=5.8e-08  Score=44.40  Aligned_cols=45  Identities=24%  Similarity=0.292  Sum_probs=36.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+.+++.+. ....++++|++++++|.+.+...+.+++
T Consensus       194 l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~  238 (419)
T 3i6u_A          194 LKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKE  238 (419)
T ss_dssp             HHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSCCCCH
T ss_pred             HHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccCCCCH
Confidence            45678999999999764 4568899999999999888876655543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.45  E-value=3.2e-08  Score=43.25  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=36.2

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.+ +|+||+++++.+...+..++++|++++++|.+++....
T Consensus        81 ~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  122 (313)
T 1t46_A           81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR  122 (313)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             hhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            345 79999999999988889999999999999999997653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.45  E-value=2.8e-07  Score=40.70  Aligned_cols=41  Identities=32%  Similarity=0.439  Sum_probs=35.2

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++++..  ...+++++|++++++|.+++...
T Consensus        87 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  129 (318)
T 3lxp_A           87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH  129 (318)
T ss_dssp             HHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS
T ss_pred             HHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC
Confidence            456789999999998887  46789999999999999998764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.45  E-value=2.9e-08  Score=43.82  Aligned_cols=40  Identities=23%  Similarity=0.441  Sum_probs=35.3

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|+||+++++.+...+..++++|++++|+|.+++...
T Consensus       104 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  144 (333)
T 2i1m_A          104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK  144 (333)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHH
T ss_pred             HhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHh
Confidence            445 7999999999998888999999999999999988753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.44  E-value=5.1e-08  Score=41.96  Aligned_cols=39  Identities=36%  Similarity=0.571  Sum_probs=33.1

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.++|+|++++++.+...+..++++|++.++++..++..
T Consensus        61 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   99 (271)
T 3dtc_A           61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG   99 (271)
T ss_dssp             HHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTS
T ss_pred             HhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhc
Confidence            457899999999999988899999999999999988864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.44  E-value=3e-08  Score=43.96  Aligned_cols=37  Identities=22%  Similarity=0.355  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~   38 (50)
                      ++.++|+|++++++.+...+..++++|++++++|.++
T Consensus        97 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X           97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             HTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             HHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHH
Confidence            4567899999999999999999999999999998877

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.43  E-value=2.8e-07  Score=44.49  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=37.9

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .|++|+.+++++.+.+.+++++|++.+|+|..+++..+.+++
T Consensus       400 ~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~  441 (674)
T 3pfq_A          400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE  441 (674)
T ss_dssp             CCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCH
Confidence            699999999999999999999999999999999987766654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.42  E-value=1.1e-07  Score=41.42  Aligned_cols=40  Identities=35%  Similarity=0.878  Sum_probs=34.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+...+..++++|+++++++..++..
T Consensus        70 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  109 (302)
T 2j7t_A           70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE  109 (302)
T ss_dssp             HHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHH
T ss_pred             HhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHh
Confidence            3467899999999999988899999999999999988765

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.42  E-value=1.6e-06  Score=38.32  Aligned_cols=38  Identities=24%  Similarity=0.542  Sum_probs=33.8

Q ss_pred             CCCCeeceeceEEEeC----CEEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYLRK----DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~----~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.|+||+.+++.+...    ...++++|++.+|+|.++++..
T Consensus        88 ~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  129 (337)
T 3mdy_A           88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST  129 (337)
T ss_dssp             CCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC
T ss_pred             hcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc
Confidence            5899999999988877    7899999999999999998754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.42  E-value=2.3e-07  Score=40.57  Aligned_cols=40  Identities=48%  Similarity=1.002  Sum_probs=35.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|++++.+++.+......++++|+++++++.+++..
T Consensus        74 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  113 (303)
T 3a7i_A           74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP  113 (303)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT
T ss_pred             HHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc
Confidence            3457899999999999999999999999999999998864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.42  E-value=3.3e-07  Score=40.48  Aligned_cols=40  Identities=28%  Similarity=0.486  Sum_probs=34.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+...+..++++|++. +++.+++...
T Consensus        57 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~   96 (317)
T 2pmi_A           57 MKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSR   96 (317)
T ss_dssp             HTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHH
T ss_pred             HHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhc
Confidence            467889999999999999999999999998 5888887643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.41  E-value=4.3e-07  Score=39.45  Aligned_cols=41  Identities=37%  Similarity=0.822  Sum_probs=34.0

Q ss_pred             CccCCCCeeceeceEEEe-------------CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR-------------KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-------------~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+..             ....++++|++++++|.+++...
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (303)
T 1zy4_A           56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE  109 (303)
T ss_dssp             HTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHS
T ss_pred             HHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcc
Confidence            456789999999987754             35688999999999999998754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.41  E-value=1.4e-07  Score=43.49  Aligned_cols=39  Identities=26%  Similarity=0.478  Sum_probs=33.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+. ....++++|++.+|+|.++++.
T Consensus       237 l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~  275 (454)
T 1qcf_A          237 MKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKS  275 (454)
T ss_dssp             HTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHS
T ss_pred             HhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHh
Confidence            56789999999998775 5678999999999999999874

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.40  E-value=1e-07  Score=41.65  Aligned_cols=40  Identities=30%  Similarity=0.495  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+......++++++++++++.+++..
T Consensus        84 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (307)
T 2nru_A           84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC  123 (307)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             HHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh
Confidence            3567899999999999888899999999999999998864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.36  E-value=7.9e-08  Score=42.79  Aligned_cols=40  Identities=20%  Similarity=0.463  Sum_probs=33.6

Q ss_pred             cC-CCCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DC-KHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+ +|+||+++++.+...+ ..++++|++.+|+|.+++....
T Consensus        81 ~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           81 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             HHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred             hhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence            45 6899999999887654 4899999999999999998653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.35  E-value=1.3e-07  Score=42.11  Aligned_cols=43  Identities=30%  Similarity=0.346  Sum_probs=35.9

Q ss_pred             ccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          3 KDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      +.+.|+||+.+++.+..    ....++++|++ +++|.+++...+.++
T Consensus       103 ~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~  149 (345)
T 2v62_A          103 KQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFK  149 (345)
T ss_dssp             HTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCC
T ss_pred             ccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCC
Confidence            45689999999998877    67899999999 899999987655444

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.35  E-value=9.9e-08  Score=43.29  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=34.7

Q ss_pred             CccCCCCeeceeceEEEeCC--EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD--KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~--~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++.+....  ..++++|++.+++|.+++...
T Consensus        61 l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  103 (396)
T 4eut_A           61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP  103 (396)
T ss_dssp             HHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSG
T ss_pred             HHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhh
Confidence            45678999999999887654  789999999999999998754

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.35  E-value=1.1e-06  Score=39.40  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=33.6

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ..|++++.+++.+...+..++++|++.+|+|.+++..
T Consensus       124 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  160 (365)
T 3e7e_A          124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINL  160 (365)
T ss_dssp             GGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHH
T ss_pred             hhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHH
Confidence            3489999999999999999999999999999999974

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.34  E-value=8.6e-07  Score=38.82  Aligned_cols=40  Identities=23%  Similarity=0.280  Sum_probs=34.3

Q ss_pred             cCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ...|+||+.+++.+..    ....++++|++.+++|.+++....
T Consensus        67 ~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  110 (299)
T 3m2w_A           67 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG  110 (299)
T ss_dssp             HTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCT
T ss_pred             hccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhcc
Confidence            4589999999998876    567899999999999999998654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.34  E-value=1.2e-07  Score=43.71  Aligned_cols=39  Identities=28%  Similarity=0.558  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      |+.++|+||+++++.+.. +..++++|++.+|+|.++++.
T Consensus       233 l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  271 (452)
T ss_dssp             HHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSH
T ss_pred             HHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHh
Confidence            456889999999987755 678999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.34  E-value=4e-07  Score=39.32  Aligned_cols=40  Identities=38%  Similarity=0.850  Sum_probs=33.8

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+..  ....++++|++++++|.+++..
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  100 (279)
T 2w5a_A           59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK  100 (279)
T ss_dssp             HHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHH
T ss_pred             HHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHh
Confidence            356789999999997754  5689999999999999998865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.33  E-value=2.1e-07  Score=40.34  Aligned_cols=41  Identities=29%  Similarity=0.622  Sum_probs=33.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|||++++++.+ ..+..++++|++.+++|.+++....
T Consensus        70 l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~  110 (281)
T 1mp8_A           70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK  110 (281)
T ss_dssp             HHTCCCTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             HHhCCCCccceEEEEE-ccCccEEEEecCCCCCHHHHHHhcC
Confidence            3567899999999876 4567889999999999999987543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.33  E-value=1.8e-07  Score=40.76  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=34.0

Q ss_pred             CccCCCCeeceeceEEE-eCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYL-RKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+. .....++++|++.+++|.+++...
T Consensus        80 l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~  121 (298)
T 3f66_A           80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE  121 (298)
T ss_dssp             HHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCT
T ss_pred             HHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhc
Confidence            45678999999999754 456788999999999999998753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.32  E-value=9.5e-07  Score=38.48  Aligned_cols=40  Identities=25%  Similarity=0.428  Sum_probs=34.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+...+..++++|++.+ ++...+...
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~   93 (288)
T 1ob3_A           54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVC   93 (288)
T ss_dssp             GGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTS
T ss_pred             HHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhc
Confidence            5678999999999999999999999999985 888877653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.32  E-value=6.7e-07  Score=39.41  Aligned_cols=40  Identities=20%  Similarity=0.361  Sum_probs=32.3

Q ss_pred             CccCCCCeeceeceEEEeCCEE------EEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKL------WICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~------~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+......      +++++++.+++|..++..
T Consensus        79 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~  124 (323)
T 3qup_A           79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA  124 (323)
T ss_dssp             HTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHH
T ss_pred             HHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHh
Confidence            4567899999999988776554      899999999999998864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.32  E-value=8.7e-07  Score=39.19  Aligned_cols=40  Identities=28%  Similarity=0.485  Sum_probs=33.9

Q ss_pred             CccCCCCeeceeceEEE--eCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYL--RKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~--~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+.+++.+.  .....++++|++++++|.+++..
T Consensus        78 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  119 (327)
T 3lxl_A           78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR  119 (327)
T ss_dssp             HHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHH
T ss_pred             HHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHh
Confidence            45678999999999876  34678999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.31  E-value=5e-07  Score=39.03  Aligned_cols=41  Identities=29%  Similarity=0.566  Sum_probs=33.3

Q ss_pred             CccCCCCeeceeceEEEe----------------CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR----------------KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----------------~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++.+++.+..                ....++++|++++++|.+++...
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  114 (284)
T 2a19_B           58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR  114 (284)
T ss_dssp             HHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHG
T ss_pred             HHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhc
Confidence            356789999999987754                34588999999999999999654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.30  E-value=5.3e-07  Score=39.61  Aligned_cols=40  Identities=23%  Similarity=0.418  Sum_probs=33.2

Q ss_pred             CccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+||+++++.+..    ....++++|++.+++|.+++..
T Consensus        80 l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (317)
T 2buj_A           80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER  123 (317)
T ss_dssp             HHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHH
T ss_pred             HhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHH
Confidence            356789999999998763    3478899999999999998875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.29  E-value=2.4e-07  Score=44.53  Aligned_cols=40  Identities=28%  Similarity=0.468  Sum_probs=30.7

Q ss_pred             CccCCCCeeceeceEEEeCCE-----EEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDK-----LWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~-----~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++++...+.     .++++|++++++|.+.+..
T Consensus       133 l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             GGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C
T ss_pred             HHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC
Confidence            567899999999998876554     7999999999998877653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.29  E-value=8.8e-07  Score=39.26  Aligned_cols=39  Identities=21%  Similarity=0.146  Sum_probs=34.6

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .|++++.+++.+......++++|++ +++|.+++...
T Consensus        59 ~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~   98 (330)
T 2izr_A           59 KQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLC   98 (330)
T ss_dssp             HHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT
T ss_pred             HHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHc
Confidence            455 8999999999999999999999999 89999998763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.29  E-value=3.4e-07  Score=39.81  Aligned_cols=40  Identities=25%  Similarity=0.458  Sum_probs=33.9

Q ss_pred             CccCCCCeeceeceEEEeCCEE-EEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKL-WICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++.+++.+...+.. +++++++.++++.+++..
T Consensus        76 l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  116 (298)
T 3pls_A           76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS  116 (298)
T ss_dssp             HHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHC
T ss_pred             HHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhc
Confidence            4567899999999988766554 899999999999999876

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.27  E-value=1.1e-07  Score=41.45  Aligned_cols=41  Identities=34%  Similarity=0.507  Sum_probs=34.1

Q ss_pred             CccCCCCeeceeceEEEeC--CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+...  ...++++|++++++|.+++...
T Consensus        65 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  107 (295)
T 3ugc_A           65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH  107 (295)
T ss_dssp             HHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC
T ss_pred             HHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc
Confidence            4567899999999987543  4589999999999999998764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.27  E-value=5.4e-07  Score=40.44  Aligned_cols=38  Identities=42%  Similarity=0.904  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+++++++......++++|++. |++.+.+.
T Consensus       108 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~  145 (348)
T 1u5q_A          108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE  145 (348)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHH
Confidence            456789999999999999999999999998 57777664

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.27  E-value=5.3e-07  Score=39.23  Aligned_cols=40  Identities=25%  Similarity=0.447  Sum_probs=33.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+ ..+..++++|++.+++|.+++...
T Consensus        64 l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~  103 (287)
T 1u59_A           64 MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK  103 (287)
T ss_dssp             HHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTC
T ss_pred             HHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhC
Confidence            3467899999999988 456689999999999999988643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.27  E-value=2.9e-06  Score=37.62  Aligned_cols=38  Identities=29%  Similarity=0.662  Sum_probs=33.6

Q ss_pred             CCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.|+||+.+++.+....    ..++++|++++++|.+++...
T Consensus        93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  134 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY  134 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC
T ss_pred             cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc
Confidence            68999999999887765    789999999999999998753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.26  E-value=1.1e-06  Score=40.11  Aligned_cols=40  Identities=23%  Similarity=0.280  Sum_probs=33.1

Q ss_pred             cCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ..+|+||+.+++.+..    ...+++++|++.+|+|.+++...+
T Consensus       111 ~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~  154 (400)
T 1nxk_A          111 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG  154 (400)
T ss_dssp             HTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC-
T ss_pred             hcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhC
Confidence            3579999999998765    567899999999999999997643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.26  E-value=5.1e-07  Score=43.51  Aligned_cols=40  Identities=28%  Similarity=0.601  Sum_probs=33.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++.+. .+..++++|++.+|+|.++++..
T Consensus       445 l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~  484 (656)
T 2j0j_A          445 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR  484 (656)
T ss_dssp             HHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhc
Confidence            35678999999999774 56689999999999999998754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.26  E-value=1.4e-07  Score=44.40  Aligned_cols=39  Identities=28%  Similarity=0.558  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      |+.++|+||+++++.+.. ...++++|++.+|+|.++++.
T Consensus       316 l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          316 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG  354 (535)
T ss_dssp             HHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSH
T ss_pred             HHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhh
Confidence            456889999999987755 678999999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.24  E-value=9e-07  Score=39.74  Aligned_cols=43  Identities=30%  Similarity=0.489  Sum_probs=34.3

Q ss_pred             ccCCCCeeceeceEEEeC----CEEEEEEeccCCCChHHHHhhc-CCCC
Q psy13313          3 KDCKHHNIIAYYGSYLRK----DKLWICMEYCGGGSLQDIYHTY-KIFP   46 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~----~~~~l~~~~~~~~~l~~~~~~~-~~~~   46 (50)
                      +.+.|+||+.+++.+...    ...++++|++ +++|.+++... +.++
T Consensus       103 ~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~  150 (364)
T 3op5_A          103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFS  150 (364)
T ss_dssp             TTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCC
T ss_pred             hhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCC
Confidence            457899999999987664    4589999999 89999998765 3444

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.24  E-value=1.2e-07  Score=41.75  Aligned_cols=41  Identities=34%  Similarity=0.673  Sum_probs=33.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      ++.++|+||+++++.+.  +..++++|++++++|.+++.....
T Consensus        55 l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~   95 (307)
T 2eva_A           55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP   95 (307)
T ss_dssp             HHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSS
T ss_pred             HhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCC
Confidence            35678999999998765  347899999999999999986543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.24  E-value=1.2e-06  Score=38.87  Aligned_cols=41  Identities=24%  Similarity=0.351  Sum_probs=35.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.+.|+||+.+++.+......++++|++. +++..++...+
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~   94 (324)
T 3mtl_A           54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG   94 (324)
T ss_dssp             HSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTT
T ss_pred             HHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcC
Confidence            456789999999999999999999999998 58888877543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.24  E-value=5.8e-07  Score=39.77  Aligned_cols=41  Identities=34%  Similarity=0.511  Sum_probs=33.3

Q ss_pred             CccCCCCeeceeceEEEeCC--EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD--KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~--~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+...+  ..++++|++++++|.+++...
T Consensus        96 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  138 (326)
T 2w1i_A           96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH  138 (326)
T ss_dssp             HHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHS
T ss_pred             HHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhc
Confidence            45678999999998776543  688999999999999999765

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.23  E-value=1.9e-06  Score=37.60  Aligned_cols=40  Identities=20%  Similarity=0.418  Sum_probs=35.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+++++.+...+..++++|++. +++.+++...
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~   95 (299)
T 2r3i_A           56 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS   95 (299)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHT
T ss_pred             HHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhh
Confidence            456789999999999999999999999998 5898888754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.22  E-value=2.8e-07  Score=40.63  Aligned_cols=40  Identities=18%  Similarity=0.316  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+++++.+......++++|++.+ ++...+...
T Consensus        73 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~  112 (311)
T 3niz_A           73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN  112 (311)
T ss_dssp             HHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTC
T ss_pred             HHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhc
Confidence            4567899999999999999999999999984 777776543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.22  E-value=5.7e-06  Score=37.01  Aligned_cols=38  Identities=26%  Similarity=0.463  Sum_probs=33.8

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +.|+||+.+++.+...+..++++|++ +++|.+++....
T Consensus        93 ~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  130 (360)
T 3llt_A           93 INNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN  130 (360)
T ss_dssp             TTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT
T ss_pred             CCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcC
Confidence            35999999999999999999999999 789999987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.19  E-value=9.6e-07  Score=39.11  Aligned_cols=39  Identities=23%  Similarity=0.249  Sum_probs=32.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.++|+||+++++.+. ....+++++++.+|++.+++...
T Consensus        70 ~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~  108 (325)
T 3kex_A           70 GSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQH  108 (325)
T ss_dssp             HTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSS
T ss_pred             hcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHc
Confidence            4578999999999775 45688999999999999988753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.17  E-value=2.3e-06  Score=37.97  Aligned_cols=40  Identities=15%  Similarity=0.171  Sum_probs=33.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++.+.... .+++++++.+|++.+++...
T Consensus        71 l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~  110 (327)
T 3poz_A           71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH  110 (327)
T ss_dssp             HHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHS
T ss_pred             HHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhc
Confidence            35678999999999887654 77889999999999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.17  E-value=6.8e-07  Score=38.68  Aligned_cols=41  Identities=29%  Similarity=0.538  Sum_probs=33.3

Q ss_pred             CccCCCCeeceeceEEEeC-CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+... +..++++|++++++|.+++...
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (278)
T 1byg_A           68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR  109 (278)
T ss_dssp             HTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhc
Confidence            4578899999999976544 4689999999999999988753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.17  E-value=1.3e-06  Score=38.16  Aligned_cols=38  Identities=18%  Similarity=0.396  Sum_probs=31.5

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~   39 (50)
                      ++.+.|+||+++++.+..  ....++++|++.++++....
T Consensus        90 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~  129 (298)
T 2zv2_A           90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP  129 (298)
T ss_dssp             HHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred             HHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence            456789999999998876  56899999999988876643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.16  E-value=1.6e-06  Score=38.04  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=31.5

Q ss_pred             CccCCCCeeceeceEEEeCC-----EEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+++++.+....     ..+++++++.++++..++.
T Consensus        90 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~  133 (313)
T 3brb_A           90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL  133 (313)
T ss_dssp             HHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHH
T ss_pred             HhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHH
Confidence            35678999999999887644     3589999999999999884

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.14  E-value=1.9e-06  Score=37.40  Aligned_cols=39  Identities=26%  Similarity=0.379  Sum_probs=31.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+....  ++++|++.++++.+.+...
T Consensus        77 l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~  115 (287)
T 4f0f_A           77 MSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDK  115 (287)
T ss_dssp             HTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCT
T ss_pred             HHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcc
Confidence            45678999999999886655  5899999999998887543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.14  E-value=1.8e-06  Score=38.10  Aligned_cols=37  Identities=43%  Similarity=1.121  Sum_probs=32.4

Q ss_pred             CCCeeceeceEEEe------CCEEEEEEeccCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLR------KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~------~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .|+||+.+++.+..      ....++++|++.+++|.+++...
T Consensus        79 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhc
Confidence            79999999998876      46789999999999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.12  E-value=5.9e-07  Score=39.36  Aligned_cols=40  Identities=20%  Similarity=0.463  Sum_probs=33.3

Q ss_pred             cC-CCCeeceeceEEEeCC-EEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DC-KHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+ +|+||+.+++.+...+ ..++++|++.+++|.+++....
T Consensus        86 ~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  127 (316)
T 2xir_A           86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  127 (316)
T ss_dssp             HHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCT
T ss_pred             hcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcc
Confidence            44 6899999999887654 5899999999999999997654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.12  E-value=1.5e-06  Score=38.78  Aligned_cols=44  Identities=20%  Similarity=0.376  Sum_probs=36.0

Q ss_pred             ccCCC--CeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCKH--HNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~h--~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.+.|  ++|+.+++.+......++++| +.++++.+++...+.+++
T Consensus        62 ~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~  107 (343)
T 3dbq_A           62 NKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP  107 (343)
T ss_dssp             HHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCCH
T ss_pred             HhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCCH
Confidence            34544  899999999999999999999 567899999987766554

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.10  E-value=2.6e-06  Score=39.35  Aligned_cols=39  Identities=23%  Similarity=0.535  Sum_probs=33.8

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ .||||+++++.+......++++|++. |++.+++...
T Consensus        72 ~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~  111 (432)
T 3p23_A           72 RESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQK  111 (432)
T ss_dssp             HHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSS
T ss_pred             HhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhc
Confidence            345 79999999999999999999999997 5999988754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.09  E-value=8.6e-06  Score=35.51  Aligned_cols=37  Identities=30%  Similarity=0.578  Sum_probs=31.1

Q ss_pred             CCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhh
Q psy13313          5 CKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         5 l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.|+||+++++.+..    ....++++|++++|+|.++++.
T Consensus        59 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   99 (301)
T 3q4u_A           59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL   99 (301)
T ss_dssp             CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT
T ss_pred             ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh
Confidence            689999999987554    2458899999999999999864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.09  E-value=5.3e-06  Score=36.91  Aligned_cols=40  Identities=15%  Similarity=0.171  Sum_probs=33.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++.+.... .+++++++.++++.+++...
T Consensus        71 l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~  110 (327)
T 3lzb_A           71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH  110 (327)
T ss_dssp             HTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHT
T ss_pred             HHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhc
Confidence            45688999999999887655 77889999999999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.06  E-value=3.5e-06  Score=37.58  Aligned_cols=40  Identities=25%  Similarity=0.261  Sum_probs=32.9

Q ss_pred             cCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+.|+|++.+++.+..    ....++++|++.+|+|.+++....
T Consensus        78 ~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~  121 (336)
T 3fhr_A           78 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG  121 (336)
T ss_dssp             HTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-
T ss_pred             hcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcC
Confidence            4679999999998765    445899999999999999997653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.06  E-value=1.2e-06  Score=37.90  Aligned_cols=39  Identities=31%  Similarity=0.591  Sum_probs=32.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+. .+..++++|++.+++|.+++..
T Consensus        62 l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~  100 (279)
T 1qpc_A           62 MKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKT  100 (279)
T ss_dssp             HHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTS
T ss_pred             HHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhc
Confidence            35678999999998775 4568899999999999998864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.06  E-value=6.3e-06  Score=38.02  Aligned_cols=39  Identities=33%  Similarity=0.558  Sum_probs=33.1

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      ..||||+++++.+.+....++++|++. |+|.+++.....
T Consensus        66 ~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~  104 (434)
T 2rio_A           66 DDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNV  104 (434)
T ss_dssp             TTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC--
T ss_pred             cCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCC
Confidence            379999999999999999999999996 699999876543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.06  E-value=1.7e-06  Score=37.50  Aligned_cols=40  Identities=28%  Similarity=0.422  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+|++++++.+.. +..++++++++++++.+++...
T Consensus        67 l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~  106 (281)
T 3cc6_A           67 MKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERN  106 (281)
T ss_dssp             HHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHH
T ss_pred             HHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhc
Confidence            345789999999998754 4568999999999999998754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.06  E-value=2.1e-06  Score=37.26  Aligned_cols=40  Identities=30%  Similarity=0.394  Sum_probs=33.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+|++++++.+.... .++++++++++++.+++...
T Consensus        75 l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~  114 (291)
T 1u46_A           75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH  114 (291)
T ss_dssp             HHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHH
T ss_pred             HHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhc
Confidence            34578999999999887654 78999999999999988753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.06  E-value=2e-05  Score=34.91  Aligned_cols=41  Identities=24%  Similarity=0.287  Sum_probs=31.9

Q ss_pred             ccCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          3 KDCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ..+.|+|++++++.+..     ....++++|++++|+|.+++....
T Consensus        62 ~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  107 (336)
T 3g2f_A           62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT  107 (336)
T ss_dssp             TTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC
T ss_pred             HhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc
Confidence            45789999999875432     235789999999999999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.03  E-value=2.4e-06  Score=37.52  Aligned_cols=42  Identities=12%  Similarity=0.114  Sum_probs=31.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEec-cCCCChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEY-CGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~   47 (50)
                      .|+||+++++.+...+..++++++ +.++++.+++...+.+++
T Consensus        96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~  138 (312)
T 2iwi_A           96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE  138 (312)
T ss_dssp             CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCH
T ss_pred             CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCH
Confidence            799999999998888888999998 788999999987665543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.02  E-value=1.6e-06  Score=39.88  Aligned_cols=45  Identities=22%  Similarity=0.416  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+.+++.+...     ..+++++|++. ++|...++....+++
T Consensus        79 l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~  128 (432)
T 3n9x_A           79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTE  128 (432)
T ss_dssp             HHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCH
T ss_pred             HHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCH
Confidence            4567899999999988665     56899999987 599999887655543

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.01  E-value=7.3e-06  Score=36.25  Aligned_cols=37  Identities=30%  Similarity=0.770  Sum_probs=31.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      +.+.|+||+++++.+...+..++++|++.+ ++..++.
T Consensus        76 ~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  112 (327)
T 3aln_A           76 RSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYK  112 (327)
T ss_dssp             SSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHH
T ss_pred             HcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHH
Confidence            457899999999999999999999999985 7776665

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.00  E-value=6.2e-07  Score=42.44  Aligned_cols=40  Identities=25%  Similarity=0.233  Sum_probs=32.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+.+..+.......++++|++++++|.+++..
T Consensus       393 l~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~  432 (540)
T 3en9_A          393 LALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED  432 (540)
T ss_dssp             HHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT
T ss_pred             HHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH
Confidence            4567899999666666677778999999999999988754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.99  E-value=2.1e-06  Score=37.42  Aligned_cols=39  Identities=28%  Similarity=0.565  Sum_probs=32.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++.++++. .....+++++++.++++...+..
T Consensus        74 l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~  112 (289)
T 3og7_A           74 LRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHA  112 (289)
T ss_dssp             HTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTT
T ss_pred             HHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhh
Confidence            4678899999999854 55668899999999999998854

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.97  E-value=1.6e-05  Score=36.30  Aligned_cols=39  Identities=23%  Similarity=0.421  Sum_probs=33.6

Q ss_pred             CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          7 HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         7 h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      |+||+.+++++...+.+++++| +.+++|.+++.....++
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~  153 (390)
T 2zmd_A          115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID  153 (390)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCC
T ss_pred             CCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCC
Confidence            6999999999999999999999 56789999998766554

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=97.97  E-value=5.7e-06  Score=36.74  Aligned_cols=36  Identities=17%  Similarity=0.375  Sum_probs=32.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .|++++.+++.+......++++|++.++++.+++..
T Consensus        87 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  122 (327)
T 3lm5_A           87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP  122 (327)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSS
T ss_pred             CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHH
Confidence            579999999999999999999999999999888754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.96  E-value=1.2e-06  Score=39.49  Aligned_cols=45  Identities=7%  Similarity=-0.030  Sum_probs=32.0

Q ss_pred             CccCCCCeeceec-------eEEEeCC-----------------EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYY-------GSYLRKD-----------------KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~-------~~~~~~~-----------------~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||++++       +.+...+                 ..++++|++ +|+|.+++...+.+++
T Consensus       130 l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~  198 (377)
T 3byv_A          130 LRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSS  198 (377)
T ss_dssp             STTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTT
T ss_pred             ccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccccc
Confidence            4556899999887       4444332                 278999999 5799999986544443

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.95  E-value=3.8e-05  Score=33.94  Aligned_cols=37  Identities=22%  Similarity=0.363  Sum_probs=32.0

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ..|+|++.+++++......++++|++ ++++...+...
T Consensus       114 ~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~  150 (311)
T 3p1a_A          114 GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAW  150 (311)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHH
T ss_pred             cCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhc
Confidence            37999999999999999999999999 46888877654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.95  E-value=6e-06  Score=37.38  Aligned_cols=38  Identities=29%  Similarity=0.419  Sum_probs=29.0

Q ss_pred             CccCCCCeeceeceEEEe--------------------------------------CCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--------------------------------------KDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--------------------------------------~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+++++++..                                      ....++++|+++ +++.+.+.
T Consensus        54 l~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~  129 (383)
T 3eb0_A           54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLK  129 (383)
T ss_dssp             HTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHH
T ss_pred             HHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHH
Confidence            567899999999998744                                      234889999998 47666554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.95  E-value=1.1e-05  Score=35.03  Aligned_cols=37  Identities=30%  Similarity=0.760  Sum_probs=31.6

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      +.+.|+|++.+++.+...+..++++|++. +++.+.+.
T Consensus        61 ~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~   97 (290)
T 3fme_A           61 RTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYK   97 (290)
T ss_dssp             TTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHH
T ss_pred             HhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHH
Confidence            45789999999999999999999999998 47766654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=97.92  E-value=1.8e-06  Score=39.82  Aligned_cols=45  Identities=13%  Similarity=0.374  Sum_probs=34.9

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+.+++.+...     ..+++++|++. +++..+++....+++
T Consensus       106 l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~  155 (458)
T 3rp9_A          106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTE  155 (458)
T ss_dssp             HHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCCH
T ss_pred             HHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCCH
Confidence            4567899999999987443     56899999875 689998887665554

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.92  E-value=2.8e-06  Score=37.98  Aligned_cols=40  Identities=18%  Similarity=0.372  Sum_probs=33.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+.+++.+......++++|++.+ ++...+...
T Consensus        66 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~  105 (346)
T 1ua2_A           66 LQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDN  105 (346)
T ss_dssp             HHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTC
T ss_pred             HhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhc
Confidence            3467899999999999888999999999985 788777654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=97.92  E-value=1e-06  Score=42.95  Aligned_cols=42  Identities=29%  Similarity=0.525  Sum_probs=34.2

Q ss_pred             CccCCCCeeceeceEEEe------CCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLR------KDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~------~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++||||+.+++.+..      .+..++++|++++++|.+++....
T Consensus        66 L~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~  113 (676)
T 3qa8_A           66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE  113 (676)
T ss_dssp             HHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSS
T ss_pred             HHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcc
Confidence            456789999999887544      566789999999999999998644

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=97.89  E-value=1.1e-05  Score=35.65  Aligned_cols=39  Identities=15%  Similarity=0.222  Sum_probs=32.4

Q ss_pred             ccCC-CCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCK-HHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~-h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+. |+|++.+++.+..  ....+++++++.++++..+++.
T Consensus        85 ~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~  126 (330)
T 3nsz_A           85 ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT  126 (330)
T ss_dssp             HHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG
T ss_pred             HHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh
Confidence            3454 9999999998887  5678999999999999888753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.86  E-value=2.9e-05  Score=33.81  Aligned_cols=37  Identities=16%  Similarity=0.073  Sum_probs=33.1

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +|++++.+++.+......++++|++ +++|.+++...+
T Consensus        64 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~  100 (298)
T 1csn_A           64 GCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCG  100 (298)
T ss_dssp             TCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT
T ss_pred             cCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhc
Confidence            6899999999999999999999999 899999998643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=97.84  E-value=1.3e-05  Score=35.03  Aligned_cols=39  Identities=28%  Similarity=0.683  Sum_probs=28.9

Q ss_pred             CccCCCCeeceeceEEE--eCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYL--RKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~--~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+.  .....++++|++.++ +.+.+..
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~  100 (305)
T 2wtk_C           60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDS  100 (305)
T ss_dssp             HTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHH
T ss_pred             HHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHh
Confidence            45678999999999874  345789999999866 6666654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=97.79  E-value=4.9e-06  Score=37.23  Aligned_cols=29  Identities=17%  Similarity=0.188  Sum_probs=23.7

Q ss_pred             eceEEEe-CCEEEEEEeccCCCChHHHHhhc
Q psy13313         13 YYGSYLR-KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus        13 ~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +++.+.. ....++++|++ +++|.+++...
T Consensus       122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  151 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVS  151 (352)
T ss_dssp             CCEEEEETTTEEEEEEECC-CEEHHHHHHHS
T ss_pred             hhhccccCCcEEEEEecCC-CcCHHHHHHhC
Confidence            5666655 67899999999 89999999865

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.79  E-value=1.1e-05  Score=36.04  Aligned_cols=39  Identities=15%  Similarity=0.439  Sum_probs=30.1

Q ss_pred             CccCCCCeeceeceEEEeC--------CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK--------DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~--------~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+|++++++.+...        +..++++|++.+ ++...+..
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~  116 (351)
T 3mi9_A           70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN  116 (351)
T ss_dssp             HHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHC
T ss_pred             HHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhh
Confidence            3567899999999988763        468999999985 66666543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=97.79  E-value=4.8e-05  Score=33.45  Aligned_cols=39  Identities=13%  Similarity=0.158  Sum_probs=31.5

Q ss_pred             CCCCeeceeceEEEeCC-----EEEEEEeccCCCChHHHHhhcCC
Q psy13313          5 CKHHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDIYHTYKI   44 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~   44 (50)
                      +.|+||+++++.+....     ..++++|++. +++..++.....
T Consensus        71 ~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~  114 (308)
T 3g33_A           71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPP  114 (308)
T ss_dssp             HCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCT
T ss_pred             cCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccC
Confidence            45999999999887754     5889999997 599998876543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.78  E-value=2.3e-05  Score=34.42  Aligned_cols=37  Identities=19%  Similarity=0.474  Sum_probs=29.9

Q ss_pred             ccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHh
Q psy13313          3 KDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      +.+.|+||+++++.+...+..++++|++ ++.+.....
T Consensus        79 ~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~  115 (318)
T 2dyl_A           79 KSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKK  115 (318)
T ss_dssp             HTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHH
T ss_pred             HhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHH
Confidence            4568999999999999999999999999 345555443

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.76  E-value=4.9e-05  Score=33.47  Aligned_cols=40  Identities=23%  Similarity=0.391  Sum_probs=33.8

Q ss_pred             CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          7 HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         7 h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |++++.+++.+......++++| +.+++|.+++.....+++
T Consensus        87 ~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~  126 (313)
T 3cek_A           87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP  126 (313)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCH
T ss_pred             CCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCH
Confidence            5999999999999999999999 567899999987665543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=97.72  E-value=4.2e-05  Score=33.74  Aligned_cols=37  Identities=19%  Similarity=0.315  Sum_probs=30.6

Q ss_pred             CCCCeeceeceEEE-----eCCEEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYL-----RKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~-----~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.|+||+++++.+.     .....++++|++. +++..++...
T Consensus        71 ~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  112 (326)
T 1blx_A           71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKV  112 (326)
T ss_dssp             TCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHS
T ss_pred             cCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhc
Confidence            47999999999876     4457889999998 6999988764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.72  E-value=7.2e-05  Score=33.20  Aligned_cols=42  Identities=14%  Similarity=0.117  Sum_probs=35.3

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCC-CChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGG-GSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~~   47 (50)
                      .|++++.+++.+...+..+++++++.+ +++.+++...+.+++
T Consensus       106 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~  148 (320)
T 3a99_A          106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE  148 (320)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCH
T ss_pred             CCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCH
Confidence            369999999999999999999999875 899999887665543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.69  E-value=2.9e-05  Score=35.43  Aligned_cols=38  Identities=26%  Similarity=0.607  Sum_probs=30.8

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+||+.+++.+..  ...+++++|++. +++...+.
T Consensus        72 l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  111 (405)
T 3rgf_A           72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIK  111 (405)
T ss_dssp             HHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHH
T ss_pred             HHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHH
Confidence            456789999999998855  678999999987 47777665

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.68  E-value=8e-06  Score=36.57  Aligned_cols=40  Identities=20%  Similarity=0.408  Sum_probs=30.8

Q ss_pred             CccCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++|+||+.+++.+..     ....++++|++. |++...+...
T Consensus        83 l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~  127 (362)
T 3pg1_A           83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ  127 (362)
T ss_dssp             HHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT
T ss_pred             HHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc
Confidence            356789999999998754     236899999998 5777777643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=97.68  E-value=7.1e-06  Score=37.11  Aligned_cols=39  Identities=18%  Similarity=0.522  Sum_probs=31.6

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+.+++.+....      .+++++|++ ++++..+++.
T Consensus        78 l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~  122 (367)
T 1cm8_A           78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH  122 (367)
T ss_dssp             HHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH
T ss_pred             HHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc
Confidence            45678999999999887653      468999999 6799988875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.68  E-value=2.5e-05  Score=34.23  Aligned_cols=39  Identities=18%  Similarity=0.393  Sum_probs=31.0

Q ss_pred             CccCCCCeeceeceEEE--------------eCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYL--------------RKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~--------------~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.+.|+|++++++.+.              .....++++|++. +++...+..
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  114 (320)
T 2i6l_A           62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ  114 (320)
T ss_dssp             HHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT
T ss_pred             HHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc
Confidence            45678999999988763              3467899999998 689888864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=97.62  E-value=3.4e-05  Score=35.03  Aligned_cols=38  Identities=13%  Similarity=0.398  Sum_probs=30.8

Q ss_pred             ccCC-CCeeceeceEEEeCC--EEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCK-HHNIIAYYGSYLRKD--KLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~-h~~i~~~~~~~~~~~--~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+. |+||+.+++.+...+  .+++++|++. +++...++.
T Consensus        63 ~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  103 (388)
T 3oz6_A           63 TELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRA  103 (388)
T ss_dssp             HHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHH
T ss_pred             HhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHc
Confidence            3454 999999999887654  6899999998 588888875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.59  E-value=4.4e-05  Score=34.14  Aligned_cols=34  Identities=24%  Similarity=0.358  Sum_probs=25.6

Q ss_pred             ccCCCCeeceeceEEEeCCE-------EEEEEeccCCCChHH
Q psy13313          3 KDCKHHNIIAYYGSYLRKDK-------LWICMEYCGGGSLQD   37 (50)
Q Consensus         3 ~~l~h~~i~~~~~~~~~~~~-------~~l~~~~~~~~~l~~   37 (50)
                      +.+.|+||+++++++.....       .++++|++.+ ++..
T Consensus        74 ~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~  114 (360)
T 3e3p_A           74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHR  114 (360)
T ss_dssp             HHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHH
T ss_pred             HhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHH
Confidence            34689999999998865432       8899999986 4443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=97.55  E-value=2.9e-05  Score=35.48  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=26.2

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCCh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSL   35 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l   35 (50)
                      ++.++|+||+++++++....      .+++++|+++++.+
T Consensus        86 l~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~  125 (394)
T 4e7w_A           86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVY  125 (394)
T ss_dssp             HHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHH
T ss_pred             HHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHH
Confidence            45688999999999875533      38899999986433

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=97.47  E-value=0.00095  Score=29.50  Aligned_cols=37  Identities=14%  Similarity=0.142  Sum_probs=31.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+++++.+++.+...+..++++|++ ++++.+++...+
T Consensus        75 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~  111 (339)
T 1z57_A           75 STFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENG  111 (339)
T ss_dssp             CTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT
T ss_pred             CceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcC
Confidence            3456899999999999999999999 789999887654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.47  E-value=5.6e-05  Score=34.22  Aligned_cols=38  Identities=26%  Similarity=0.468  Sum_probs=30.3

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.+.|+||+.+++.+....      ..++++|++.+ ++...+.
T Consensus        78 l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~  121 (371)
T 2xrw_A           78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ  121 (371)
T ss_dssp             HHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH
T ss_pred             HHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHh
Confidence            35678999999999887654      78999999974 6777665

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=97.33  E-value=9.9e-05  Score=33.29  Aligned_cols=40  Identities=18%  Similarity=0.255  Sum_probs=31.9

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+.|+||+.+++.+...     ...+++++++. +++...++..
T Consensus        79 l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~  123 (364)
T 3qyz_A           79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ  123 (364)
T ss_dssp             HHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC
T ss_pred             HHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC
Confidence            4567899999999988654     36899999998 5888888753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.33  E-value=5.5e-05  Score=33.40  Aligned_cols=37  Identities=19%  Similarity=0.419  Sum_probs=28.4

Q ss_pred             cC-CCCeeceeceEEE--------eCCEEEEEEeccCCCChHHHHhh
Q psy13313          4 DC-KHHNIIAYYGSYL--------RKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~--------~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .+ .|+||+++++.+.        .....+++++++. |++.+++..
T Consensus        81 ~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~  126 (337)
T 3ll6_A           81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKK  126 (337)
T ss_dssp             HHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHH
T ss_pred             HhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHH
Confidence            45 4999999998874        2345789999996 688887764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=97.28  E-value=7e-05  Score=33.41  Aligned_cols=39  Identities=26%  Similarity=0.413  Sum_probs=31.1

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+...     ...++++|++. +++...+..
T Consensus        63 l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~  106 (353)
T 2b9h_A           63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST  106 (353)
T ss_dssp             HHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH
T ss_pred             HHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhh
Confidence            3567899999999876543     57899999997 588888765

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.27  E-value=3.4e-06  Score=37.47  Aligned_cols=21  Identities=29%  Similarity=0.455  Sum_probs=16.7

Q ss_pred             CCEEEEEEeccCCCChHHHHh
Q psy13313         20 KDKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus        20 ~~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ...+++++|++.+|++...+.
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~  154 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMR  154 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGT
T ss_pred             cCeEEEEEEecCCCccHHHHH
Confidence            678999999999886655553

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.24  E-value=0.0021  Score=29.91  Aligned_cols=38  Identities=13%  Similarity=0.238  Sum_probs=32.7

Q ss_pred             CCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          5 CKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ..|+|++.+++.+.....+++++|++. +++.+++....
T Consensus       156 ~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~  193 (429)
T 3kvw_A          156 DNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNK  193 (429)
T ss_dssp             TSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTT
T ss_pred             cCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhcc
Confidence            468899999999999999999999997 68888887643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=97.20  E-value=8.4e-05  Score=34.78  Aligned_cols=38  Identities=24%  Similarity=0.467  Sum_probs=28.8

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+++++.+...      ..+++++|++.+ ++...+.
T Consensus       115 l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~  158 (464)
T 3ttj_A          115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ  158 (464)
T ss_dssp             HHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT
T ss_pred             HHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHh
Confidence            4567899999999988654      357999999985 4555543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=97.13  E-value=4.4e-05  Score=34.66  Aligned_cols=39  Identities=21%  Similarity=0.479  Sum_probs=26.8

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+.+++.+...      ...+++++++ +++|..+++.
T Consensus        82 l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~  126 (367)
T 2fst_X           82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC  126 (367)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----
T ss_pred             HHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc
Confidence            4567899999999987653      4578999988 5788777664

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=97.09  E-value=6.4e-05  Score=34.01  Aligned_cols=38  Identities=24%  Similarity=0.474  Sum_probs=29.7

Q ss_pred             CccCCCCeeceeceEEEeCCEE------EEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKL------WICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~------~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+.+++.+......      +++++++. +++...+.
T Consensus        95 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  138 (371)
T 4exu_A           95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG  138 (371)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTT
T ss_pred             HHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhh
Confidence            3567899999999988766544      89999998 57776654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=96.92  E-value=0.00037  Score=32.19  Aligned_cols=37  Identities=16%  Similarity=0.265  Sum_probs=26.8

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChHHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~~~~   39 (50)
                      ++.+.|+||+.+++.+...      ..+++++|++++ ++...+
T Consensus       101 l~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~  143 (420)
T 1j1b_A          101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVA  143 (420)
T ss_dssp             HHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHH
T ss_pred             HHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHH
Confidence            4578999999998877432      246789999985 555544

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=96.78  E-value=0.006  Score=27.83  Aligned_cols=35  Identities=14%  Similarity=0.247  Sum_probs=29.7

Q ss_pred             CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          7 HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         7 h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +++++.+.+.+...+..++++|++. +++.+++...
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  149 (382)
T 2vx3_A          115 KYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNT  149 (382)
T ss_dssp             GGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHT
T ss_pred             ceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhc
Confidence            4468999999999999999999997 5999988764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.78  E-value=0.0012  Score=29.83  Aligned_cols=35  Identities=9%  Similarity=0.185  Sum_probs=26.2

Q ss_pred             CCCeeceeceEEE----eCCEEEEEEeccCCCChHHHHhh
Q psy13313          6 KHHNIIAYYGSYL----RKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         6 ~h~~i~~~~~~~~----~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +|++++++++.+.    .....++++|++. +++...+..
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~  137 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLG-HHLLKWIIK  137 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCC-CBHHHHHHH
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccC-ccHHHHHHh
Confidence            4888999999876    3457899999995 566665543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=96.75  E-value=7.4e-05  Score=33.50  Aligned_cols=38  Identities=21%  Similarity=0.456  Sum_probs=28.6

Q ss_pred             CccCCCCeeceeceEEEeCCE------EEEEEeccCCCChHHHHh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDK------LWICMEYCGGGSLQDIYH   40 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~------~~l~~~~~~~~~l~~~~~   40 (50)
                      ++.++|+||+.+++.+.....      .+++++++. +++...+.
T Consensus        77 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~  120 (353)
T 3coi_A           77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG  120 (353)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT
T ss_pred             HHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhc
Confidence            346789999999998876543      489999987 57665543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=96.70  E-value=0.0013  Score=29.86  Aligned_cols=20  Identities=15%  Similarity=0.218  Sum_probs=17.1

Q ss_pred             EEEEEEeccCCCChHHHHhhc
Q psy13313         22 KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus        22 ~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ..++++|++. ++|.+++...
T Consensus       162 ~~~lv~e~~~-~~L~~~l~~~  181 (371)
T 3q60_A          162 NYLLLMPAAS-VDLELLFSTL  181 (371)
T ss_dssp             EEEEEECCCS-EEHHHHHHHH
T ss_pred             eEEEEecCCC-CCHHHHHHHh
Confidence            4899999999 8999998753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=96.65  E-value=0.0018  Score=29.12  Aligned_cols=36  Identities=17%  Similarity=0.345  Sum_probs=29.3

Q ss_pred             CCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          6 KHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .|+||+.+++.+....    ..+++++++ ++++.+++...
T Consensus        84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~  123 (373)
T 1q8y_A           84 GANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKY  123 (373)
T ss_dssp             HHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHT
T ss_pred             ccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHh
Confidence            4899999999877543    788999999 78999988763

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=96.42  E-value=0.0019  Score=28.80  Aligned_cols=34  Identities=9%  Similarity=0.080  Sum_probs=26.5

Q ss_pred             CeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          8 HNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         8 ~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ..++.+.+.+......++++|++. +++...+...
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~  115 (355)
T 2eu9_A           82 FLCVLMSDWFNFHGHMCIAFELLG-KNTFEFLKEN  115 (355)
T ss_dssp             SCBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHT
T ss_pred             eeEEEeeeeeeeCCeEEEEEeccC-CChHHHHHhc
Confidence            347888888888999999999995 5666666544

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.10  E-value=0.026  Score=24.60  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=28.0

Q ss_pred             ccCCCCeeceece-EEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYG-SYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+.|++++..+. +.......++++|++ ++++.+++..
T Consensus        59 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~   97 (296)
T 4hgt_A           59 KMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF   97 (296)
T ss_dssp             HHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred             HHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHH
Confidence            3455666555544 456778899999999 8899999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=95.88  E-value=0.035  Score=24.24  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=27.6

Q ss_pred             ccCCCCeeceece-EEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          3 KDCKHHNIIAYYG-SYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         3 ~~l~h~~i~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      +.+.|++++..+. +.......++++|++ +++|.+++..
T Consensus        59 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~   97 (296)
T 3uzp_A           59 KMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF   97 (296)
T ss_dssp             HHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred             HHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHh
Confidence            3456666555444 456678889999999 7899999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=95.81  E-value=0.052  Score=26.00  Aligned_cols=37  Identities=19%  Similarity=0.121  Sum_probs=28.1

Q ss_pred             cCCC-CeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          4 DCKH-HNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         4 ~l~h-~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      .+.| +++..+..+.......++++|++ +++|.+++..
T Consensus        58 ~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~   95 (483)
T 3sv0_A           58 ILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF   95 (483)
T ss_dssp             HTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH
T ss_pred             HhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHh
Confidence            4544 45555566667788899999999 8899999874

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=92.11  E-value=0.35  Score=20.92  Aligned_cols=32  Identities=6%  Similarity=-0.171  Sum_probs=24.8

Q ss_pred             CCeeceeceEEEeCCEEEEEEeccCCCChHHH
Q psy13313          7 HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         7 h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~   38 (50)
                      +..+..+++.....+..++++++++|.++...
T Consensus        69 ~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           69 KLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             TSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             CCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence            34556677777778889999999998887654

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=90.25  E-value=0.042  Score=24.38  Aligned_cols=26  Identities=19%  Similarity=0.118  Sum_probs=18.4

Q ss_pred             ceeceEEEeCCEEEEEEeccCCCChHH
Q psy13313         11 IAYYGSYLRKDKLWICMEYCGGGSLQD   37 (50)
Q Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~~~l~~   37 (50)
                      +.+.+.+.. +..++++|++++++|..
T Consensus       164 ~~v~~~~~~-~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          164 LAVPKVYAW-EGNAVLMELIDAKELYR  189 (282)
T ss_dssp             SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred             CCcCeEEec-cceEEEEEecCCCcHHH
Confidence            455554433 44689999999988876

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=80.50  E-value=1.6  Score=18.63  Aligned_cols=27  Identities=15%  Similarity=0.207  Sum_probs=19.7

Q ss_pred             eceeceEEEeCCEEEEEEeccCCCChH
Q psy13313         10 IIAYYGSYLRKDKLWICMEYCGGGSLQ   36 (50)
Q Consensus        10 i~~~~~~~~~~~~~~l~~~~~~~~~l~   36 (50)
                      +..+++.....+..+++++++++.++.
T Consensus        77 vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           77 CAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCeEEEeccCCCCCEEEEEecCCcccC
Confidence            445666666667789999999887663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	50
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-09
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-08
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-07
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-06
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-06
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	0.001
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.001
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.001
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.003

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 9e-10
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++ +C    I+ +YG++    ++ ICME+  GGSL  +       P
Sbjct: 57  VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.5 bits (115), Expect = 2e-09
 Identities = 12/46 (26%), Positives = 19/46 (41%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++   KH NI+A    Y     L++ M+   GG L D       + 
Sbjct: 60  VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 105

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.7 bits (113), Expect = 4e-09
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
            ++  +H N I Y G YLR+   W+ MEYC G +   +    K   
Sbjct: 68  FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ 113

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 47.4 bits (112), Expect = 4e-09
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           +M    H  +I  + ++  K ++ + +E+  GG L D      
Sbjct: 79  IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED 121

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 6e-09
 Identities = 9/46 (19%), Positives = 16/46 (34%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           +M    H   +  Y ++   +KL+  + Y   G L         F 
Sbjct: 61  VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD 106

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 9e-09
 Identities = 11/47 (23%), Positives = 20/47 (42%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           +    +H  +   + ++  K+ L+  MEY  GG L     +   F L
Sbjct: 56  LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL 102

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 1e-08
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           +M++ K+ NI+ Y  SYL  D+LW+ MEY  GGSL D+  
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT 109

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 3e-08
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           ++  C H NI+    ++  ++ LWI +E+C GG++  +    +
Sbjct: 62  ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 104

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 44.3 bits (104), Expect = 5e-08
 Identities = 6/40 (15%), Positives = 18/40 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
            M   +H  ++  + ++   +++ +  E+  GG L +   
Sbjct: 76  TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA 115

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 5e-08
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
          ++   +H NI+  + S+   ++L +  E+  G  + +  +T  
Sbjct: 54 ILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSA 96

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-07
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           M +   H NI+   G+      +++  EYC  G L +   + +
Sbjct: 94  MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR 136

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 1e-07
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT 41
          +M    H  ++  YG  L +  + +  E+   G L D   T
Sbjct: 53 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT 93

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.8 bits (100), Expect = 2e-07
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK----LWICMEYCGGGSLQDIYHTYKIFP 46
                 H  I+A Y +   +       +I MEY  G +L+DI HT     
Sbjct: 60  NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 109

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           +M   +H N++   G  +  K  L+I  EY   GSL D   +     L
Sbjct: 53  VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 100

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-07
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           +MK+   H+++   G   +     + ME    G L+    + +
Sbjct: 76  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 118

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (100), Expect = 2e-07
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
          +++  +H NI+ + G Y    +L I  ++C G SL    H  +
Sbjct: 57 VLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIE 98

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-07
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
          +M +  H  ++  YG   ++  ++I  EY   G L +     +
Sbjct: 52 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 94

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-07
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           +    +H NI+  YG +    ++++ +EY   G++         F 
Sbjct: 59  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 104

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 2e-07
 Identities = 9/43 (20%), Positives = 15/43 (34%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           +     H NI+   G+        +  EYC  G L +     +
Sbjct: 80  LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 3e-07
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++K+ +H N+I  +  Y  K  + + +E   GG L D     +   
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 111

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 5e-07
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 1   MMKDCKHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIYHTYK 43
           ++++ KH NI+ YY   + +    L+I MEYC GG L  +     
Sbjct: 56  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 100

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.6 bits (97), Expect = 5e-07
 Identities = 8/46 (17%), Positives = 17/46 (36%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++       I+    ++   DKL   ++   GG L      + +F 
Sbjct: 60  LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 105

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 5e-07
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           + K   H NII   G+   +  L++ +EY   G+L D     ++  
Sbjct: 64  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 109

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 8e-07
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           +MK+ KH N++   G   R+   +I  E+   G+L D         +
Sbjct: 66  VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 112

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 1e-06
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           +MK  +H  ++  Y   + ++ ++I  EY   GSL D   T     L
Sbjct: 61  LMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKL 106

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-06
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
           +M    +  I+   G   + + L + ME  GGG L       +
Sbjct: 62  IMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKR 103

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-06
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           M    KH NII   G+  +   L++ +EY   G+L++     +   L
Sbjct: 72  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-06
 Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 4/51 (7%)

Query: 1   MMKDCKHHNIIAYYGSY----LRKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
             +  +  +I+     Y      +  L I ME   GG L            
Sbjct: 58  HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 108

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 2e-06
 Identities = 8/49 (16%), Positives = 17/49 (34%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPLLK 49
           +M +  + NI+   G       + +  EY   G L +   +     +  
Sbjct: 69  LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS 117

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 2e-06
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           + K   H N++ +YG     +  ++ +EYC GG L D        P
Sbjct: 56  INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 101

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 2e-06
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 1   MMKDCKHHNIIAYYGSYL----RKDKLWICMEYCGGGSLQDIYHTYKIFPL 47
           M+K  +H NI+ +Y S+      K  + +  E    G+L+     +K+  +
Sbjct: 61  MLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI 111

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 3e-06
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 1  MMKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTYKIFP 46
               +H NI+ +  +  + +    +LW+  +Y   GSL D  + Y +  
Sbjct: 50 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV 99

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.4 bits (91), Expect = 3e-06
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           +M    H N+I   G   +   + I  E+   GSL     
Sbjct: 80  IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR 119

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 39.3 bits (91), Expect = 3e-06
 Identities = 9/46 (19%), Positives = 14/46 (30%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           + K   H NII    +Y      ++  +    G L D         
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 108

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 5e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKD-KLWICMEYCGGGSLQDIYHTYKIFP 46
           +MKD  H N+++  G  LR +    + + Y   G L++        P
Sbjct: 81  IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP 127

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 7e-06
 Identities = 7/46 (15%), Positives = 14/46 (30%), Gaps = 1/46 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           +M+   +  I+   G     +   + ME    G L       +   
Sbjct: 61  VMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVK 105

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 7e-06
 Identities = 6/46 (13%), Positives = 17/46 (36%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
          ++++  H NII    ++  K  + +  ++        I     +  
Sbjct: 53 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT 98

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 2e-05
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           M+   H +I+   G  + ++ +WI ME C  G L+    
Sbjct: 61 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ 99

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 2e-05
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           +M    HHNII   G   +   + I  EY   G+L     
Sbjct: 62  IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR 101

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 2e-05
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYH 40
           +MK  +H  ++  Y   + ++ ++I  EY   GSL D   
Sbjct: 65  VMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLK 103

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 3e-05
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
            M    H N+I  YG  L    + +  E    GSL D    ++
Sbjct: 64  AMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQ 105

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (83), Expect = 4e-05
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           M+    H  II  +G++    ++++ M+Y  GG L  +    + FP
Sbjct: 57  MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP 102

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 2e-04
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           ++++ +H  + A   ++   D+L   MEY  GG L       ++F 
Sbjct: 58  VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT 103

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (75), Expect = 4e-04
 Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 1   MMKDCKHH-NIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           +++  +    ++  + ++  + KL + ++Y  GG L       + F 
Sbjct: 81  VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT 127

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 6e-04
 Identities = 5/40 (12%), Positives = 11/40 (27%)

Query: 4   DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK 43
                 +I     + R D   + +E          + T +
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 104

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.1 bits (72), Expect = 0.001
 Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 6/46 (13%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK------LWICMEYCGGGSLQDIYH 40
           +M+   H NI+     +    +      L + ++Y      +   H
Sbjct: 66  IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 111

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 32.2 bits (72), Expect = 0.001
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 1  MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
          ++K+ KH NI+  Y     K +L +  E+      + +        
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE 98

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 31.7 bits (71), Expect = 0.001
 Identities = 6/44 (13%), Positives = 11/44 (25%), Gaps = 2/44 (4%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDK--LWICMEYCGGGSLQDIYHTY 42
           +       NII               +  E+      + +Y T 
Sbjct: 83  LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL 126

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.9 bits (69), Expect = 0.003
 Identities = 6/46 (13%), Positives = 11/46 (23%)

Query: 1   MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFP 46
           +M    + ++    G  L      I      G  L  +        
Sbjct: 64  VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIG 109

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	50
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.38
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.37
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.36
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.35
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.32
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.3
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.28
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.27
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.26
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.24
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.21
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.21
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.2
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.19
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.19
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.16
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.16
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.14
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.14
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.09
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.09
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.07
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.05
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.02
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.98
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.92
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.9
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.89
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.87
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.87
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.84
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.84
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.79
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	98.78
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.75
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.74
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.73
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.71
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.7
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.66
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.65
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.65
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.61
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.61
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.52
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.51
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.47
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	98.36
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.03
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	97.94
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.88
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.8
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	97.79
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.73
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	97.71
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.7
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	97.43
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	97.24
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	96.57

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.38  E-value=2.5e-13  Score=58.92  Aligned_cols=46  Identities=26%  Similarity=0.398  Sum_probs=41.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+.+.+.+++++|++++|+|.+++...+.+++
T Consensus        61 l~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e  106 (307)
T d1a06a_          61 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE  106 (307)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCH
Confidence            4678999999999999999999999999999999999988777765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.2e-13  Score=58.58  Aligned_cols=46  Identities=24%  Similarity=0.402  Sum_probs=41.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++++.+.+.+++++|++++|+|.+++...+.+++
T Consensus        67 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~  112 (293)
T d1jksa_          67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE  112 (293)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccch
Confidence            4568999999999999999999999999999999999987776654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.8e-13  Score=58.50  Aligned_cols=47  Identities=28%  Similarity=0.689  Sum_probs=42.2

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +++.++||||+++++++.+...+++++|++++|+|..++.+.+.+++
T Consensus        57 il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~  103 (322)
T d1s9ja_          57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE  103 (322)
T ss_dssp             GGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCH
T ss_pred             HHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCH
Confidence            46788999999999999999999999999999999999987776654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=4.3e-13  Score=57.20  Aligned_cols=46  Identities=20%  Similarity=0.418  Sum_probs=41.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+++.+++++|++++|+|.+++...+.+++
T Consensus        60 l~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e  105 (263)
T d2j4za1          60 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE  105 (263)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             HHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCH
Confidence            4678999999999999999999999999999999999988777665

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.5e-13  Score=58.83  Aligned_cols=46  Identities=28%  Similarity=0.526  Sum_probs=41.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+++.+++++|++++|+|.++++..+.+++
T Consensus        57 l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e  102 (271)
T d1nvra_          57 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE  102 (271)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCH
T ss_pred             HHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCH
Confidence            4678999999999999999999999999999999999887666654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=4.7e-13  Score=57.68  Aligned_cols=46  Identities=20%  Similarity=0.356  Sum_probs=41.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+.+.+++++|++++|+|.+++...+.+++
T Consensus        62 l~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e  107 (288)
T d1uu3a_          62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE  107 (288)
T ss_dssp             HHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCH
T ss_pred             HHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCH
Confidence            4578999999999999999999999999999999999988777765

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.8e-12  Score=56.47  Aligned_cols=46  Identities=17%  Similarity=0.256  Sum_probs=40.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK-IFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~   47 (50)
                      |+.++||||+++++.+.+.+.+++++|++.+|+|.++++..+ .+++
T Consensus        55 l~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e  101 (321)
T d1tkia_          55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNE  101 (321)
T ss_dssp             HHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCH
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCH
Confidence            567899999999999999999999999999999999997654 4554

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2.2e-12  Score=56.56  Aligned_cols=46  Identities=24%  Similarity=0.415  Sum_probs=42.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+.+++.+.+.+.+++++|++++|+|..++...+.+++
T Consensus        59 l~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e  104 (337)
T d1o6la_          59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE  104 (337)
T ss_dssp             HHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCH
T ss_pred             HHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcH
Confidence            5678999999999999999999999999999999999998887765

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.26  E-value=1.6e-12  Score=55.74  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=40.2

Q ss_pred             ccCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          3 KDCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         3 ~~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +.+. ||||+++++++.+++.+++++|++++|+|.++++..+.+++
T Consensus        64 ~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e  109 (277)
T d1phka_          64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE  109 (277)
T ss_dssp             HHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             HHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCH
Confidence            4455 99999999999999999999999999999999988777765

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.3e-12  Score=54.26  Aligned_cols=46  Identities=24%  Similarity=0.518  Sum_probs=38.8

Q ss_pred             CccCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++++.+    ...+++++|++++|+|.+++.+.+.+++
T Consensus        62 l~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~  111 (270)
T d1t4ha_          62 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI  111 (270)
T ss_dssp             HTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             HHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccH
Confidence            577899999999998865    3468999999999999999987766654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=5.7e-12  Score=54.89  Aligned_cols=44  Identities=25%  Similarity=0.476  Sum_probs=40.4

Q ss_pred             cCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          4 DCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      .++||||+++++++.+.+.+++++|++++|+|..++...+.+++
T Consensus        59 ~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e  102 (320)
T d1xjda_          59 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL  102 (320)
T ss_dssp             HTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCH
T ss_pred             hCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCH
Confidence            57899999999999999999999999999999999988777765

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=5.7e-12  Score=54.27  Aligned_cols=46  Identities=24%  Similarity=0.704  Sum_probs=39.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh-cCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT-YKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~   47 (50)
                      ++.++||||+++++.+.+.+.+++++|++++|+|..++.. .+.+++
T Consensus        63 l~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e  109 (288)
T d2jfla1          63 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTE  109 (288)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCH
T ss_pred             HHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCH
Confidence            4678999999999999999999999999999999998764 344554

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.20  E-value=5.9e-12  Score=54.67  Aligned_cols=46  Identities=33%  Similarity=0.621  Sum_probs=40.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+++.+++++|++.+|++..++...+.+++
T Consensus        69 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e  114 (309)
T d1u5ra_          69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE  114 (309)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCH
T ss_pred             HHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCH
Confidence            5678999999999999999999999999999998877776666664

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.2e-11  Score=53.41  Aligned_cols=45  Identities=42%  Similarity=0.765  Sum_probs=39.0

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++.+.+++.+++++|++++|+|..++... .+++
T Consensus        71 l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~-~l~~  115 (293)
T d1yhwa1          71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDE  115 (293)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCCH
T ss_pred             HHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhcc-CCCH
Confidence            46789999999999999999999999999999999987753 4443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.19  E-value=8.6e-12  Score=54.93  Aligned_cols=46  Identities=20%  Similarity=0.315  Sum_probs=39.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK-IFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~   47 (50)
                      ++.++||||+++++++.+.+.++++||++++|+|.+.+...+ ++++
T Consensus        80 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e  126 (352)
T d1koba_          80 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE  126 (352)
T ss_dssp             HTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCH
Confidence            567899999999999999999999999999999998776543 3544

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.19  E-value=6.8e-12  Score=55.22  Aligned_cols=46  Identities=13%  Similarity=0.273  Sum_probs=39.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh-cCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT-YKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~   47 (50)
                      ++.++||||+++++++.+.+.+++++|++++|+|.+++.. .+.+++
T Consensus        77 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e  123 (350)
T d1koaa2          77 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE  123 (350)
T ss_dssp             HHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCH
Confidence            4678999999999999999999999999999999998853 344544

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.16  E-value=1.9e-11  Score=54.04  Aligned_cols=46  Identities=17%  Similarity=0.229  Sum_probs=40.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.+.||||+.+++++.+.+.+++++|++++|+|..++.....+++
T Consensus        61 l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e  106 (364)
T d1omwa3          61 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE  106 (364)
T ss_dssp             HSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCH
T ss_pred             HhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccH
Confidence            3456899999999999999999999999999999999987776654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1e-11  Score=53.21  Aligned_cols=45  Identities=16%  Similarity=0.188  Sum_probs=38.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+++++.+.+ +..++++|++++|+|.++++....+++
T Consensus        62 l~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~l~~  106 (277)
T d1xbba_          62 MQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKD  106 (277)
T ss_dssp             HHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCH
T ss_pred             HHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhhccCCCH
Confidence            567899999999998865 457899999999999999988776654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=2.4e-11  Score=52.87  Aligned_cols=46  Identities=24%  Similarity=0.536  Sum_probs=40.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++.+.+.+++++|++.+|++...+.....+++
T Consensus        58 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~  103 (316)
T d1fota_          58 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN  103 (316)
T ss_dssp             HHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCH
T ss_pred             HHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccc
Confidence            4678999999999999999999999999999999999887766543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=7.3e-12  Score=54.11  Aligned_cols=46  Identities=24%  Similarity=0.380  Sum_probs=39.2

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~~   47 (50)
                      |+.++||||+++++++...+.+++++|++++|+|..++... +.+++
T Consensus        81 l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~  127 (299)
T d1jpaa_          81 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV  127 (299)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCH
T ss_pred             HHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCH
Confidence            56789999999999999889999999999999999988764 33443

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.9e-11  Score=51.99  Aligned_cols=41  Identities=24%  Similarity=0.484  Sum_probs=36.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++++..++..++++|++++|+|.+++...
T Consensus        54 l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~   94 (263)
T d1sm2a_          54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ   94 (263)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             HHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhcc
Confidence            45789999999999999889999999999999999988654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=9.1e-11  Score=50.77  Aligned_cols=41  Identities=27%  Similarity=0.480  Sum_probs=36.9

Q ss_pred             CccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.+ +||||+++++++...+.+++++|++++|+|.++++..
T Consensus        64 l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          64 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             HTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTT
T ss_pred             HHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhc
Confidence            4566 6999999999999999999999999999999998754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=3.7e-11  Score=51.66  Aligned_cols=41  Identities=29%  Similarity=0.489  Sum_probs=37.1

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++++.+.+..++++|++++|++..++...
T Consensus        67 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~  107 (287)
T d1opja_          67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC  107 (287)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHS
T ss_pred             HHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhc
Confidence            56789999999999999989999999999999999998754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=6.5e-11  Score=50.56  Aligned_cols=40  Identities=38%  Similarity=0.850  Sum_probs=33.3

Q ss_pred             CccCCCCeeceeceEEEe--CCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLR--KDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++||||+++++.+.+  ...+++++|++++|+|.+++..
T Consensus        57 l~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~   98 (269)
T d2java1          57 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK   98 (269)
T ss_dssp             TTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHH
T ss_pred             HHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHh
Confidence            677899999999998854  4568999999999999998863

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.7e-11  Score=52.33  Aligned_cols=40  Identities=23%  Similarity=0.484  Sum_probs=36.1

Q ss_pred             ccC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          3 KDC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         3 ~~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +.+ +||||+++++.+.+.+.+++++|++++|+|.++++..
T Consensus        95 ~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_          95 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             HHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhc
Confidence            345 7999999999999999999999999999999999754

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=3.5e-10  Score=49.76  Aligned_cols=46  Identities=17%  Similarity=0.325  Sum_probs=41.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++||||+.+++.+.+....+++++++.+|++...+...+.+++
T Consensus        95 l~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e  140 (350)
T d1rdqe_          95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE  140 (350)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCH
T ss_pred             HHHcCCCcEeecccccccccccccccccccccchhhhHhhcCCCCH
Confidence            5678999999999999999999999999999999999987777665

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.3e-10  Score=49.96  Aligned_cols=45  Identities=24%  Similarity=0.439  Sum_probs=35.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~~   47 (50)
                      |+.++||||+++++++.+ +.+++++|++++|+|.+++... ..+++
T Consensus        63 l~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~  108 (285)
T d1u59a_          63 MHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPV  108 (285)
T ss_dssp             HHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCH
T ss_pred             HHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCH
Confidence            457899999999998765 5688999999999999987643 34443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.92  E-value=1.9e-10  Score=49.10  Aligned_cols=46  Identities=30%  Similarity=0.385  Sum_probs=38.4

Q ss_pred             CccCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+.+++.+...+    .++++||++.+++|...+...+.+++
T Consensus        61 l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~  110 (277)
T d1o6ya_          61 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP  110 (277)
T ss_dssp             HHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCH
T ss_pred             HHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCH
Confidence            45789999999999887643    48899999999999999887777664

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.4e-09  Score=45.82  Aligned_cols=41  Identities=27%  Similarity=0.570  Sum_probs=34.9

Q ss_pred             CccCCCCeeceeceEEEeCC----EEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD----KLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~----~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      +..++||||+++++.+.+.+    .+++++|++.+|+|..++++.
T Consensus        51 ~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~   95 (303)
T d1vjya_          51 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY   95 (303)
T ss_dssp             STTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC
T ss_pred             HhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC
Confidence            35678999999999887643    689999999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.8e-10  Score=48.34  Aligned_cols=40  Identities=23%  Similarity=0.523  Sum_probs=35.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++||||+++++.+.+++.+++++|++.+|++..++..
T Consensus        53 ~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~   92 (258)
T d1k2pa_          53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE   92 (258)
T ss_dssp             HHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHS
T ss_pred             HHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhc
Confidence            4578999999999999988999999999999999888654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.4e-10  Score=49.83  Aligned_cols=46  Identities=13%  Similarity=0.221  Sum_probs=38.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++||||+++++++...+.+++++|++.++++.........+++
T Consensus        54 l~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~   99 (299)
T d1ua2a_          54 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP   99 (299)
T ss_dssp             HHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCS
T ss_pred             HHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCH
Confidence            4568999999999999999999999999998877766665555554

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.8e-10  Score=48.47  Aligned_cols=41  Identities=32%  Similarity=0.554  Sum_probs=33.6

Q ss_pred             CccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++++.. .+.+++++|++++|++.+++...
T Consensus        54 l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~   95 (262)
T d1byga_          54 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR   95 (262)
T ss_dssp             HTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHH
T ss_pred             HHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhc
Confidence            467899999999998754 45689999999999999998653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=5.1e-10  Score=47.94  Aligned_cols=44  Identities=27%  Similarity=0.513  Sum_probs=35.5

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc-CCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY-KIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~~~   46 (50)
                      ++.++||||+++++++. .+.+++++|++++|+|.+++... ..++
T Consensus        58 l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~  102 (276)
T d1uwha_          58 LRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFE  102 (276)
T ss_dssp             HTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTSCCCCC
T ss_pred             HHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhccCCCC
Confidence            56789999999998664 45689999999999999998654 3344

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1e-09  Score=48.05  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=33.5

Q ss_pred             cCCCCeeceeceEEEe----CCEEEEEEeccCCCChHHHHhhc
Q psy13313          4 DCKHHNIIAYYGSYLR----KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~----~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ..+||||+++++++.+    ...+++++||+++|+|.+++...
T Consensus        61 ~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~  103 (335)
T d2ozaa1          61 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR  103 (335)
T ss_dssp             HTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSC
T ss_pred             hcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhc
Confidence            3579999999998865    35689999999999999999764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=4.7e-09  Score=45.56  Aligned_cols=41  Identities=27%  Similarity=0.504  Sum_probs=35.1

Q ss_pred             CccCCCCeeceeceEEEe-CCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLR-KDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      |+.++||||+++++++.. +...++++|++++|++.+++...
T Consensus        82 l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~  123 (311)
T d1r0pa_          82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE  123 (311)
T ss_dssp             HHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCT
T ss_pred             HHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccc
Confidence            467899999999998765 46899999999999999988754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.1e-09  Score=46.54  Aligned_cols=40  Identities=20%  Similarity=0.370  Sum_probs=36.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++.+...+..++++|++.+|++..++..
T Consensus        77 l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_          77 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS  116 (308)
T ss_dssp             GGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             HHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHh
Confidence            5678999999999999888899999999999999998764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=8.8e-10  Score=47.73  Aligned_cols=40  Identities=23%  Similarity=0.365  Sum_probs=35.7

Q ss_pred             cC-CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DC-KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l-~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+ +||||+++++.+.+....++++|++++|++..+++...
T Consensus        82 ~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~  122 (311)
T d1t46a_          82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR  122 (311)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             hccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhcc
Confidence            45 69999999999999889999999999999999987653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.9e-09  Score=45.93  Aligned_cols=40  Identities=28%  Similarity=0.601  Sum_probs=33.7

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++++. .+.+++++|++++|++..++...
T Consensus        62 l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~  101 (273)
T d1mp8a_          62 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR  101 (273)
T ss_dssp             HHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHT
T ss_pred             HHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhcc
Confidence            46789999999999875 56789999999999999887643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.5e-09  Score=45.78  Aligned_cols=41  Identities=29%  Similarity=0.439  Sum_probs=36.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++.+...+..++++|++.++++...+...
T Consensus        63 l~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~  103 (283)
T d1mqba_          63 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK  103 (283)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHT
T ss_pred             HHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcc
Confidence            46789999999999999889999999999999998877654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.9e-09  Score=45.98  Aligned_cols=39  Identities=31%  Similarity=0.591  Sum_probs=32.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++||||+++++.+. .+..++++|++++|+|.+++..
T Consensus        62 l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~  100 (272)
T d1qpca_          62 MKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKT  100 (272)
T ss_dssp             HHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTS
T ss_pred             HHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhh
Confidence            46789999999999764 4567899999999999887653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.70  E-value=5.6e-09  Score=44.61  Aligned_cols=47  Identities=19%  Similarity=0.190  Sum_probs=39.6

Q ss_pred             CCccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          1 MMKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         1 ~l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      +|+.++||||+++++.+...+..+++++++.++.+..+.+..+.+++
T Consensus        53 il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~   99 (286)
T d1ob3a_          53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES   99 (286)
T ss_dssp             GGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCH
T ss_pred             HHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcch
Confidence            46788999999999999999999999999998777777666666654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.66  E-value=6.8e-09  Score=44.75  Aligned_cols=42  Identities=19%  Similarity=0.373  Sum_probs=37.6

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      ++.++|+|++.+++++......+++++++++|++.+++....
T Consensus        70 l~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~  111 (301)
T d1lufa_          70 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS  111 (301)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             HHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcC
Confidence            467899999999999999899999999999999999997543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=3.9e-09  Score=45.40  Aligned_cols=39  Identities=28%  Similarity=0.565  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++|+||+++++++. .+..++++|++++|++..++..
T Consensus        66 l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~  104 (285)
T d1fmka3          66 MKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKG  104 (285)
T ss_dssp             HHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSH
T ss_pred             HHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhh
Confidence            46789999999999875 4567899999999999888754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.3e-08  Score=43.87  Aligned_cols=38  Identities=29%  Similarity=0.608  Sum_probs=35.2

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      +|+||+++++++.+++.+++++|++.+|++.+++....
T Consensus        77 ~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~  114 (299)
T d1fgka_          77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR  114 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTS
T ss_pred             CCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhc
Confidence            79999999999999999999999999999999997654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=9.9e-09  Score=44.72  Aligned_cols=46  Identities=15%  Similarity=0.315  Sum_probs=39.3

Q ss_pred             CccCCC-CeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKH-HNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h-~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++| +||+.+++.+.+....++++|++.+|+|...+...+.+++
T Consensus        82 l~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e  128 (322)
T d1vzoa_          82 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE  128 (322)
T ss_dssp             HHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCH
T ss_pred             HHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccH
Confidence            345655 8999999999999999999999999999999987776654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.8e-08  Score=43.35  Aligned_cols=37  Identities=19%  Similarity=0.353  Sum_probs=31.3

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDI   38 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~   38 (50)
                      ++.++||||+++++++.++..+++++|++.++.+...
T Consensus        55 l~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~   91 (298)
T d1gz8a_          55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM   91 (298)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHH
T ss_pred             HHhCCCCcEEEeccccccccceeEEEeecCCchhhhh
Confidence            5778999999999999999999999999986544333

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.2e-08  Score=42.72  Aligned_cols=42  Identities=14%  Similarity=0.117  Sum_probs=35.5

Q ss_pred             CCCeeceeceEEEeCCEEEEEEeccCC-CChHHHHhhcCCCCC
Q psy13313          6 KHHNIIAYYGSYLRKDKLWICMEYCGG-GSLQDIYHTYKIFPL   47 (50)
Q Consensus         6 ~h~~i~~~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~~   47 (50)
                      .||||+++++++.+++..++++|++.+ +++..++.....+++
T Consensus        67 ~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e  109 (273)
T d1xwsa_          67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE  109 (273)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCH
T ss_pred             CCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCH
Confidence            389999999999999999999999875 688888877666654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.9e-08  Score=41.91  Aligned_cols=46  Identities=20%  Similarity=0.257  Sum_probs=39.9

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+||+.+++.+......+++++++.++++..++...+.+++
T Consensus        55 l~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~  100 (292)
T d1unla_          55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP  100 (292)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCH
T ss_pred             HHhcCcCCEEeeccccccccceeEEeeeccccccccccccccccch
Confidence            5678999999999999999999999999999998888877666554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.8e-08  Score=42.45  Aligned_cols=39  Identities=31%  Similarity=0.422  Sum_probs=32.8

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhh
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT   41 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~   41 (50)
                      ++.++||||+++++.+.+ +..++++|++.+|++.+.+..
T Consensus        65 l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~  103 (273)
T d1u46a_          65 MHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK  103 (273)
T ss_dssp             HHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHH
T ss_pred             HHhCCCCCEEEEEEEEee-cchheeeeeecCcchhhhhhc
Confidence            467899999999998865 457899999999999887654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.7e-07  Score=40.65  Aligned_cols=40  Identities=15%  Similarity=0.172  Sum_probs=32.4

Q ss_pred             CccCCCCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhc
Q psy13313          2 MKDCKHHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      ++.++||||+++++++.+. ..+++++++.++++...+...
T Consensus        65 l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~  104 (317)
T d1xkka_          65 MASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREH  104 (317)
T ss_dssp             HHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHT
T ss_pred             HHhCCCCCEeeEEEEEecC-CeeEEEEeccCCccccccccc
Confidence            4578999999999988765 467778898889998877654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.2e-06  Score=38.38  Aligned_cols=35  Identities=17%  Similarity=0.253  Sum_probs=27.0

Q ss_pred             CccCCCCeeceeceEEEeC------CEEEEEEeccCCCChH
Q psy13313          2 MKDCKHHNIIAYYGSYLRK------DKLWICMEYCGGGSLQ   36 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~------~~~~l~~~~~~~~~l~   36 (50)
                      |+.++|+|++++++.+...      .++++++|+++++...
T Consensus        67 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~  107 (350)
T d1q5ka_          67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYR  107 (350)
T ss_dssp             HHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHH
T ss_pred             HHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHH
Confidence            4678999999999987543      3588999999865433

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=4.4e-06  Score=35.84  Aligned_cols=38  Identities=21%  Similarity=0.452  Sum_probs=31.5

Q ss_pred             CCCCeeceeceEEEeC-CEEEEEEeccCCCChHHHHhhc
Q psy13313          5 CKHHNIIAYYGSYLRK-DKLWICMEYCGGGSLQDIYHTY   42 (50)
Q Consensus         5 l~h~~i~~~~~~~~~~-~~~~l~~~~~~~~~l~~~~~~~   42 (50)
                      .+|++++.+++.+... ..+++++|++++|+|.++++..
T Consensus        74 ~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          74 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhc
Confidence            3689999998876554 4689999999999999999754

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.3e-06  Score=38.30  Aligned_cols=37  Identities=22%  Similarity=0.366  Sum_probs=28.4

Q ss_pred             CccCCCCeeceeceEEEe------CCEEEEEEeccCCCChHHHH
Q psy13313          2 MKDCKHHNIIAYYGSYLR------KDKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~------~~~~~l~~~~~~~~~l~~~~   39 (50)
                      ++.++||||+++++++..      ...+++++|++.++. ...+
T Consensus        70 l~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l-~~~~  112 (355)
T d2b1pa1          70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-CQVI  112 (355)
T ss_dssp             HHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEH-HHHH
T ss_pred             HHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHH-HHhh
Confidence            456899999999998853      368899999997654 4443

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=2.5e-06  Score=37.24  Aligned_cols=44  Identities=16%  Similarity=0.438  Sum_probs=32.7

Q ss_pred             CccCCCCeeceeceEEEeCC------EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD------KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~------~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++|||++++++++...+      .+++++|+++ .++....+. +.+++
T Consensus        71 l~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~l~~  120 (346)
T d1cm8a_          71 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKH-EKLGE  120 (346)
T ss_dssp             HHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCS-EEHHHHHHH-CCCCH
T ss_pred             HHhcCCCCeeEEEEEeccCccccccceEEEEEeccc-ccHHHHHHh-ccccH
Confidence            46789999999999887654      4789999994 577776654 44543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=97.79  E-value=1.7e-06  Score=37.47  Aligned_cols=38  Identities=13%  Similarity=0.181  Sum_probs=30.0

Q ss_pred             CccC-CCCeeceeceEEEeC--CEEEEEEeccCCCChHHHH
Q psy13313          2 MKDC-KHHNIIAYYGSYLRK--DKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         2 l~~l-~h~~i~~~~~~~~~~--~~~~l~~~~~~~~~l~~~~   39 (50)
                      |+.+ .|+||+++++.+...  ..+++++|++.++++....
T Consensus        83 l~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~  123 (328)
T d3bqca1          83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY  123 (328)
T ss_dssp             HHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT
T ss_pred             HHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh
Confidence            3455 499999999988743  5689999999999986653

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=3.5e-06  Score=36.36  Aligned_cols=45  Identities=13%  Similarity=0.304  Sum_probs=31.3

Q ss_pred             CccCCCCeeceeceEEEe--------CCEEEEEEeccCCCChHHHHhhcCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLR--------KDKLWICMEYCGGGSLQDIYHTYKIFP   46 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~--------~~~~~l~~~~~~~~~l~~~~~~~~~~~   46 (50)
                      |+.++|+|++.+++.+..        ...+++++|++.++.+.........++
T Consensus        63 l~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~  115 (318)
T d3blha1          63 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT  115 (318)
T ss_dssp             HHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCC
T ss_pred             HHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccc
Confidence            567899999999987754        345889999998776655544433333

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.6e-06  Score=37.75  Aligned_cols=45  Identities=18%  Similarity=0.186  Sum_probs=32.3

Q ss_pred             CccCCCCeeceeceEEEeC-----CEEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRK-----DKLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~-----~~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      ++.++|+|++++++.+...     ...+++++++.+|+|.++++. +.+++
T Consensus        71 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e  120 (348)
T d2gfsa1          71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTD  120 (348)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCCCH
T ss_pred             HHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccccH
Confidence            4678999999999987643     233555677788999998865 34543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.2e-06  Score=37.00  Aligned_cols=44  Identities=16%  Similarity=0.205  Sum_probs=31.8

Q ss_pred             CccCCCCeeceeceEEEeCC-----EEEEEEeccCCCChHHHHhhcCCCCC
Q psy13313          2 MKDCKHHNIIAYYGSYLRKD-----KLWICMEYCGGGSLQDIYHTYKIFPL   47 (50)
Q Consensus         2 l~~l~h~~i~~~~~~~~~~~-----~~~l~~~~~~~~~l~~~~~~~~~~~~   47 (50)
                      |+.++|++++.+++.+....     .++++ +++.+|+|.++++.. .+++
T Consensus        60 l~~l~hp~iv~~~~~~~~~~~~~~~~~~l~-~~~~~g~L~~~l~~~-~l~~  108 (345)
T d1pmea_          60 LLRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKTQ-HLSN  108 (345)
T ss_dssp             HHHCCCTTBCCCCEEECCSSTTTCCCEEEE-EECCCEEHHHHHHHC-CCCH
T ss_pred             HHHcCCCCCCcEEEEEeeccccccceEEEE-EeecCCchhhhhhcC-CCCH
Confidence            56789999999999886543     24554 556689999998754 4443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=3.2e-05  Score=33.13  Aligned_cols=36  Identities=14%  Similarity=0.176  Sum_probs=27.0

Q ss_pred             cCCCCeeceeceEEEe-----CCEEEEEEeccCCCChHHHH
Q psy13313          4 DCKHHNIIAYYGSYLR-----KDKLWICMEYCGGGSLQDIY   39 (50)
Q Consensus         4 ~l~h~~i~~~~~~~~~-----~~~~~l~~~~~~~~~l~~~~   39 (50)
                      ..+||||+++++.+..     ...+++++|++.++.+....
T Consensus        66 ~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  106 (305)
T d1blxa_          66 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD  106 (305)
T ss_dssp             HTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHH
T ss_pred             hcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhh
Confidence            3479999999998753     24688999999877665443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.24  E-value=0.00048  Score=29.51  Aligned_cols=39  Identities=15%  Similarity=0.028  Sum_probs=31.7

Q ss_pred             cCC-CCeeceeceEEEeCCEEEEEEeccCCCChHHHHhhcC
Q psy13313          4 DCK-HHNIIAYYGSYLRKDKLWICMEYCGGGSLQDIYHTYK   43 (50)
Q Consensus         4 ~l~-h~~i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~   43 (50)
                      .+. +++++.+++++......++++|++ ++++...++..+
T Consensus        56 ~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~   95 (293)
T d1csna_          56 LLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCG   95 (293)
T ss_dssp             HTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT
T ss_pred             HhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhc
Confidence            444 488888999999999999999998 578888887644

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.57  E-value=0.004  Score=26.58  Aligned_cols=44  Identities=23%  Similarity=0.167  Sum_probs=27.8

Q ss_pred             CccCCCCe-eceeceEEEeCCEEEEEEeccCCCChHHHHhh-cCCCC
Q psy13313          2 MKDCKHHN-IIAYYGSYLRKDKLWICMEYCGGGSLQDIYHT-YKIFP   46 (50)
Q Consensus         2 l~~l~h~~-i~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~   46 (50)
                      ++.+.|++ +..+..+....+..++++|++.+ ++...+.. .+.++
T Consensus        56 ~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~-~l~~~~~~~~~~~~  101 (299)
T d1ckia_          56 YKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFS  101 (299)
T ss_dssp             HHHSTTSTTCCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTCCC
T ss_pred             HHHccCCCcccEEEEEEecCCEEEEEEEEcCC-chhhhhhhccCCCc
Confidence            34566555 44556667778889999999864 55555443 33444