Diaphorina citri psyllid: psy13339

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLLQ
cEEEEEHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHHHHccccccEEEEccccEEEEEECccccccccccEEEEEEEccccccccccccccccccccEEEcccccEEEEEEEccEEEEEEEEEECccccccccccccccccccEEEEECcccccccEEEEEEEECcccccEEEEEEccccccccEEEEEEEcccccccccEEEEEEECcccccccccccccccCECccccccCECcccccccccccHHccccccEEEEEEccccccccccccCEEEccccEEEEEEccccEEEEEEEEEccccccccccccccccccEEEEEEEccccccccccc
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGN*******************NTLHHM****************RSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLL*
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MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLLQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031981 [CC]nuclear lumenprobableGO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0044430 [CC]cytoskeletal partprobableGO:0005856, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0043226, GO:0044422
GO:0005521 [MF]lamin bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0090292 [BP]nuclear matrix anchoring at nuclear membraneprobableGO:0034504, GO:0008104, GO:0051651, GO:0071840, GO:0070727, GO:0051457, GO:0016043, GO:0065007, GO:0044699, GO:0033036, GO:0034613, GO:0032507, GO:0072595, GO:0009987, GO:0045185, GO:0043578, GO:0044763, GO:0051235, GO:0051179, GO:0051641, GO:0006996, GO:0006997, GO:0065008, GO:0033365, GO:0008150
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0034993 [CC]SUN-KASH complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0005635, GO:0044464, GO:0031967, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0034992, GO:0044424, GO:0005623, GO:0031975, GO:0043227, GO:0043226, GO:0044422, GO:0012505
GO:0090286 [BP]cytoskeletal anchoring at nuclear membraneprobableGO:0006996, GO:0033036, GO:0008104, GO:0007010, GO:0032507, GO:0070727, GO:0009987, GO:0034613, GO:0016043, GO:0045185, GO:0065007, GO:0044763, GO:0071840, GO:0008150, GO:0051235, GO:0065008, GO:0051651, GO:0051179, GO:0044699, GO:0051641
GO:0005637 [CC]nuclear inner membraneprobableGO:0005575, GO:0016020, GO:0031090, GO:0005623, GO:0031965, GO:0005634, GO:0005635, GO:0019866, GO:0031967, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0012505, GO:0044424, GO:0044464, GO:0031975, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4DXT, chain A
Confidence level:very confident
Coverage over the Query: 47-242
View the alignment between query and template
View the model in PyMOL
Template: 4DXT, chain A
Confidence level:very confident
Coverage over the Query: 262-365
View the alignment between query and template
View the model in PyMOL