Psyllid ID: psy13339

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLLQ
cEEEEEHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHHHHccccccEEEEccccEEEEEEEccccccccccEEEEEEEccccccccccccccccccccEEEcccccEEEEEEEccEEEEEEEEEEEccccccccccccccccccEEEEEEcccccccEEEEEEEEEcccccEEEEEEccccccccEEEEEEEcccccccccEEEEEEEEcccccccccccccccEEEccccccEEEccccccccccHHHHcccccEEEEEEccccccccccccEEEEccccEEEEEEccccEEEEEEEEEccccccccccccccccccEEEEEEEccccccccccc
cccEccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHccccccHHHHHccccEEEEcccccccccccEEEEEccccEEcccccccEEEEcccccccEEEEcccccEEEEEEccEEEEccEEEEccccccccccccccccccEEEEEEccccccccEEEEEEEEcccccEEEEEEccccccccEEEEEEEEEccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccEEEEccccEEEEEEEEEEEEccEEEHccccccccccccccccccEEEEEcccccccEEEEcc
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIEnikcsdkvRNEEVLRRIGEERSILRTIKKRKRSWLGhilrrdcgsvidirctetytlkdpyYVLFGYAlwrrdssprkaiqpgllpgdcwafQGAIGCLVLKLSHRIQVTRfsmehipkaltpngiidsapkKFAVWGLrekydenptllgefmydsegptlQYFEAKMVADTFDMVELKILsnhgnieytclyrfrvhgnlapspspvhtynrfssanhntlhhmtsskynpsgteeeksnrSVALTWVMFQShragkmrtngmAFQGAIGCLVLKLSHRIQVtrfsmehipktltpngiidsapKKFAVWVSEHSQCNVTFLLQ
mkinvgrsvvlygsetwtmrkkeeTYLESFEMWLWRRienikcsdkvrneevlrrigeersilrtikkrkrswlghilrrdcgsvidirctetytlkdpyYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHipkaltpngiidsapKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFsmehipktltpngiidSAPKKFAVWVSEHSQCNVTFLLQ
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLLQ
****VGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA*****************************************VALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFL**
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGN*******************NTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTP*GIIDSAPKKFAVWVSEHSQC***FLL*
MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHM****************RSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLLQ
*KINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGN*****************************************RSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFL**
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MKINVGRSVVLYGSETWTMRKKEETYLESFEMWLWRRIENIKCSDKVRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQCNVTFLLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query365 2.2.26 [Sep-21-2011]
O94901812 SUN domain-containing pro no N/A 0.490 0.220 0.502 8e-45
Q9D666913 SUN domain-containing pro no N/A 0.484 0.193 0.5 3e-44
Q8BJS4731 SUN domain-containing pro no N/A 0.523 0.261 0.459 2e-43
Q9UH99717 SUN domain-containing pro no N/A 0.454 0.231 0.497 1e-42
Q95LV7261 SUN domain-containing pro N/A N/A 0.534 0.747 0.343 2e-29
Q8TAQ9357 SUN domain-containing pro no N/A 0.487 0.498 0.357 1e-28
Q5SS91320 SUN domain-containing pro no N/A 0.534 0.609 0.348 1e-28
Q0II64360 SUN domain-containing pro no N/A 0.487 0.494 0.363 5e-28
Q207451111 Nuclear migration and anc yes N/A 0.542 0.178 0.355 2e-26
Q9NPE6437 Sperm-associated antigen no N/A 0.430 0.359 0.356 8e-24
>sp|O94901|SUN1_HUMAN SUN domain-containing protein 1 OS=Homo sapiens GN=SUN1 PE=1 SV=3 Back     alignment and function desciption
 Score =  181 bits (459), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 91/181 (50%), Positives = 115/181 (63%), Gaps = 2/181 (1%)

Query: 61  SILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQ 120
           S L+   + K   +   L    GS++  RC+ETY  K     LFG  LW    SPR  IQ
Sbjct: 628 SALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRVVIQ 687

Query: 121 PGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLRE 180
           P + PG+CWAF+G+ G LV++LS  I    F++EHIPK L+P G I SAPK FAV+GL  
Sbjct: 688 PDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLEN 747

Query: 181 KYDENPTLLGEFMYDSEGPTLQYFEA-KMVADT-FDMVELKILSNHGNIEYTCLYRFRVH 238
           +Y E   LLG+F YD +G +LQ F+A K   DT F +VEL+I SN G+ EYTCLYRFRVH
Sbjct: 748 EYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVH 807

Query: 239 G 239
           G
Sbjct: 808 G 808
Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments. Required for interkinetic nuclear migration (INM) and essential for nucleokinesis and centrosome-nucleus coupling during radial neuronal migration in the cerebral cortex and during glial migration. Anchors chromosome movement in the prophase of meiosis and is involved in selective gene expression of coding and non-coding RNAs needed for gametogenesis. Required for telomere attachment to nuclear envelope and gametogenesis. Helps to define the distribution of nuclear pore complexes (NPCs).
Homo sapiens (taxid: 9606)
>sp|Q9D666|SUN1_MOUSE SUN domain-containing protein 1 OS=Mus musculus GN=Sun1 PE=1 SV=2 Back     alignment and function description
>sp|Q8BJS4|SUN2_MOUSE SUN domain-containing protein 2 OS=Mus musculus GN=Sun2 PE=1 SV=3 Back     alignment and function description
>sp|Q9UH99|SUN2_HUMAN SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3 Back     alignment and function description
>sp|Q95LV7|SUN3_MACFA SUN domain-containing protein 3 OS=Macaca fascicularis GN=SUN3 PE=2 SV=1 Back     alignment and function description
>sp|Q8TAQ9|SUN3_HUMAN SUN domain-containing protein 3 OS=Homo sapiens GN=SUN3 PE=2 SV=4 Back     alignment and function description
>sp|Q5SS91|SUN3_MOUSE SUN domain-containing protein 3 OS=Mus musculus GN=Sun3 PE=2 SV=1 Back     alignment and function description
>sp|Q0II64|SUN3_BOVIN SUN domain-containing protein 3 OS=Bos taurus GN=SUN3 PE=2 SV=2 Back     alignment and function description
>sp|Q20745|UNC84_CAEEL Nuclear migration and anchoring protein unc-84 OS=Caenorhabditis elegans GN=unc-84 PE=1 SV=2 Back     alignment and function description
>sp|Q9NPE6|SPAG4_HUMAN Sperm-associated antigen 4 protein OS=Homo sapiens GN=SPAG4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
390361391 1269 PREDICTED: uncharacterized protein LOC58 0.471 0.135 0.531 3e-48
326928877 901 PREDICTED: SUN domain-containing protein 0.490 0.198 0.494 2e-45
363739323 906 PREDICTED: SUN domain-containing protein 0.490 0.197 0.494 3e-45
348568394 757 PREDICTED: SUN domain-containing protein 0.493 0.237 0.508 3e-45
301791810 801 PREDICTED: LOW QUALITY PROTEIN: SUN doma 0.487 0.222 0.519 1e-44
281351387 832 hypothetical protein PANDA_021492 [Ailur 0.487 0.213 0.519 1e-44
195436164 563 GK22143 [Drosophila willistoni] gi|19416 0.624 0.404 0.417 3e-44
198455914 621 GA15001 [Drosophila pseudoobscura pseudo 0.515 0.302 0.458 3e-44
195149169 623 GL11123 [Drosophila persimilis] gi|19410 0.515 0.301 0.458 3e-44
427780909 799 Putative spindle pole body protein [Rhip 0.449 0.205 0.514 5e-44
>gi|390361391|ref|XP_791258.3| PREDICTED: uncharacterized protein LOC586381 [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 92/173 (53%), Positives = 117/173 (67%), Gaps = 1/173 (0%)

Query: 70   KRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCW 129
            K   + + L    GS+I IRC+ETY  K   + LFG  LW   +SPR  IQP + PG+CW
Sbjct: 1095 KTGMVDYALESAGGSIISIRCSETYAFKTALFSLFGIPLWYLSNSPRTVIQPDVHPGNCW 1154

Query: 130  AFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLL 189
            AF+G  G +V++L+  I+ T FS+EHIPKAL P GIIDSAPK F VWGLR++YD +  LL
Sbjct: 1155 AFKGTQGYIVIQLAAAIKPTAFSLEHIPKALDPAGIIDSAPKNFTVWGLRDEYDHDGYLL 1214

Query: 190  GEFMYDSEGPTLQYFEAK-MVADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241
            G ++YD +   LQ+F  +   +     VELKI SNHGN+EYTCLYRFRVHG L
Sbjct: 1215 GSYVYDVDSSPLQFFPVQNQDSGPIQFVELKIGSNHGNMEYTCLYRFRVHGVL 1267

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota
>gi|326928877|ref|XP_003210599.1| PREDICTED: SUN domain-containing protein 1-like [Meleagris gallopavo] Back     alignment and taxonomy information
>gi|363739323|ref|XP_414757.3| PREDICTED: SUN domain-containing protein 1 [Gallus gallus] Back     alignment and taxonomy information
>gi|348568394|ref|XP_003469983.1| PREDICTED: SUN domain-containing protein 1-like [Cavia porcellus] Back     alignment and taxonomy information
>gi|301791810|ref|XP_002930873.1| PREDICTED: LOW QUALITY PROTEIN: SUN domain-containing protein 1-like [Ailuropoda melanoleuca] Back     alignment and taxonomy information
>gi|281351387|gb|EFB26971.1| hypothetical protein PANDA_021492 [Ailuropoda melanoleuca] Back     alignment and taxonomy information
>gi|195436164|ref|XP_002066039.1| GK22143 [Drosophila willistoni] gi|194162124|gb|EDW77025.1| GK22143 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|198455914|ref|XP_001360162.2| GA15001 [Drosophila pseudoobscura pseudoobscura] gi|198135445|gb|EAL24736.2| GA15001 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195149169|ref|XP_002015530.1| GL11123 [Drosophila persimilis] gi|194109377|gb|EDW31420.1| GL11123 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|427780909|gb|JAA55906.1| Putative spindle pole body protein [Rhipicephalus pulchellus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
UNIPROTKB|E1BQ86865 E1BQ86 "Uncharacterized protei 0.493 0.208 0.494 4.5e-43
UNIPROTKB|E7EP45583 SUN1 "SUN domain-containing pr 0.490 0.307 0.502 1.9e-42
UNIPROTKB|H0Y6N5634 SUN1 "SUN domain-containing pr 0.490 0.282 0.502 1.9e-42
UNIPROTKB|H0Y742710 SUN1 "SUN domain-containing pr 0.490 0.252 0.502 5.9e-42
UNIPROTKB|O94901812 SUN1 "SUN domain-containing pr 0.490 0.220 0.502 1.2e-41
UNIPROTKB|E9PHI4822 SUN1 "SUN domain-containing pr 0.490 0.217 0.502 1.2e-41
UNIPROTKB|E2R4M4823 SUN1 "Uncharacterized protein" 0.484 0.215 0.5 1.2e-41
UNIPROTKB|E2R8J5923 SUN1 "Uncharacterized protein" 0.484 0.191 0.5 1.8e-41
UNIPROTKB|A4D2Q0974 UNC84A "Unc-84 homolog A (C. e 0.490 0.183 0.502 2.1e-41
RGD|1359142757 Sun1 "Sad1 and UNC84 domain co 0.484 0.233 0.5 6.5e-41
UNIPROTKB|E1BQ86 E1BQ86 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 463 (168.0 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 89/180 (49%), Positives = 118/180 (65%)

Query:    63 LRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPG 122
             L+   + K   +   L    GS++  RC+ETY  K     LFG  LW    SPR  IQP 
Sbjct:   685 LKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALISLFGIPLWYFSQSPRVVIQPD 744

Query:   123 LLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKY 182
             + PG+CWAF+G+ G LV++LS +I  T FS+EHIPK L+P+G I SAP+KF+V+GL ++Y
Sbjct:   745 MYPGNCWAFKGSEGYLVVRLSMKIYPTAFSLEHIPKTLSPSGNITSAPRKFSVYGLDDEY 804

Query:   183 DENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 242
              E  T LG+++YD EG  LQ F  +   + F +VEL+ILSN G+ EYTCLYRFRVHG  A
Sbjct:   805 QEEGTFLGQYVYDQEGEPLQMFTVEKSENVFQIVELRILSNWGHAEYTCLYRFRVHGKPA 864
GO:0002080 "acrosomal membrane" evidence=IEA
GO:0005521 "lamin binding" evidence=IEA
GO:0005639 "integral to nuclear inner membrane" evidence=IEA
UNIPROTKB|E7EP45 SUN1 "SUN domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y6N5 SUN1 "SUN domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y742 SUN1 "SUN domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O94901 SUN1 "SUN domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PHI4 SUN1 "SUN domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2R4M4 SUN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8J5 SUN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A4D2Q0 UNC84A "Unc-84 homolog A (C. elegans)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1359142 Sun1 "Sad1 and UNC84 domain containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
pfam07738135 pfam07738, Sad1_UNC, Sad1 / UNC-like C-terminal 1e-36
pfam07738135 pfam07738, Sad1_UNC, Sad1 / UNC-like C-terminal 5e-09
>gnl|CDD|203750 pfam07738, Sad1_UNC, Sad1 / UNC-like C-terminal Back     alignment and domain information 
 Score =  128 bits (325), Expect = 1e-36
 Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 7/137 (5%)

Query: 108 LWRRDSSPRKAIQPG---LLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNG 164
           L      P+  +QP     +PG CW+F+G+ G +V++LS  I V   ++EH+ K++ P  
Sbjct: 1   LNYEAKPPKVILQPDKDSYMPGPCWSFKGSRGFVVIELSEFIIVEAVTLEHVEKSVAP-- 58

Query: 165 IIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVAD-TFDMVELKILSN 223
              SAPK F V G     D    LLG+F YD +G T+Q F+ +   D     V+L+ILSN
Sbjct: 59  -YSSAPKDFEVSGSDRYPDTKWVLLGKFTYDLDGKTIQTFQLENPPDIWVKYVKLRILSN 117

Query: 224 HGNIEYTCLYRFRVHGN 240
           +GN  YTCLYRFRVHG 
Sbjct: 118 YGNEHYTCLYRFRVHGT 134

The C. elegans UNC-84 protein is a nuclear envelope protein that is involved in nuclear anchoring and migration during development. The S. pombe Sad1 protein localises at the spindle pole body. UNC-84 and and Sad1 share a common C-terminal region, that is often termed the SUN (Sad1 and UNC) domain. In mammals, the SUN domain is present in two proteins, Sun1 and Sun2. The SUN domain of Sun2 has been demonstrated to be in the periplasm. Length = 135
>gnl|CDD|203750 pfam07738, Sad1_UNC, Sad1 / UNC-like C-terminal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 365
KOG2687|consensus414 100.0
PF07738135 Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: I 100.0
KOG2687|consensus414 99.92
PF07738135 Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: I 99.7
cd00057143 FA58C Substituted updates: Jan 31, 2002 97.76
KOG1396|consensus 530 97.74
TIGR02961322 allantoicase allantoicase. A different but similar 97.41
cd08366139 APC10 APC10 subunit of the anaphase-promoting comp 97.12
PF00754129 F5_F8_type_C: F5/8 type C domain; InterPro: IPR000 97.07
PRK13257336 allantoicase; Provisional 96.98
cd08667131 APC10-ZZEF1 APC10/DOC1-like domain of uncharacteri 96.59
cd08159129 APC10-like APC10-like DOC1 domains in E3 ubiquitin 96.48
PRK13797 516 putative bifunctional allantoicase/OHCU decarboxyl 96.08
cd08365131 APC10-like1 APC10-like DOC1 domains of E3 ubiquiti 95.81
cd08665131 APC10-CUL7 APC10-like DOC1 domain of CUL7, subunit 95.67
PF03256193 APC10: Anaphase-promoting complex, subunit 10 (APC 95.63
PF06201152 PITH: PITH domain; InterPro: IPR010400 The full-le 95.26
cd08666134 APC10-HECTD3 APC10-like DOC1 domain of HECTD3, a H 94.63
PRK13257336 allantoicase; Provisional 93.69
PRK13797516 putative bifunctional allantoicase/OHCU decarboxyl 92.5
PF03561152 Allantoicase: Allantoicase repeat; InterPro: IPR01 92.29
TIGR02961322 allantoicase allantoicase. A different but similar 90.74
cd08664152 APC10-HERC2 APC10-like DOC1 domain present in HERC 90.51
KOG3437|consensus184 87.69
PF06588199 Muskelin_N: Muskelin N-terminus; InterPro: IPR0105 81.52
>KOG2687|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.6e-50  Score=396.96  Aligned_cols=183  Identities=36%  Similarity=0.702  Sum_probs=174.7

Q ss_pred             hHHHHHHhccccccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCCCeeeccCCceEEEE
Q psy13339         61 SILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVL  140 (365)
Q Consensus        61 ~il~~i~~drl~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG~CW~f~Gs~G~L~I  140 (365)
                      -.++++.+|+++.+|||+.+.||+|+.+ ||.+|...+....+.++++|.+.++|.++|+|+..||+||||+|++|+++|
T Consensus       230 ~~i~~~~~d~v~~~DYAl~s~GAsI~~~-~S~~y~~~~~~~~~~~i~~~~~~~~P~vil~~~v~PG~Cw~FkGsrg~v~V  308 (414)
T KOG2687|consen  230 MEIQRLAEDGVGKVDYALESGGASIDSE-CSETYKSDKALLFWNGISLWNHHQPPRVILQPNVSPGECWAFKGSRGYVTV  308 (414)
T ss_pred             HHHHHHhccccCcchhhhhcCCcEEEee-cccccccCCcceEeeccccccccCCCceEecCCCCccceeeecCCceEEEE
Confidence            4677899999999999999999999999 999999999888899999999999999999999999999999999999999


Q ss_pred             EcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEecCC-CcceeEEEEE
Q psy13339        141 KLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMV-ADTFDMVELK  219 (365)
Q Consensus       141 ~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v~~~-~~~~~~V~lr  219 (365)
                      +|+++|+|++|||||++++++|+++++||||+|.|||+.++..++.++||+|+||.++.++|+|.++.. ..+|+.|+|+
T Consensus       309 ~La~~Iip~avTleHv~~sVspd~~~sSAPKdf~V~g~~~~~~~~~~LLG~ftYD~d~~~~QtF~~q~~~~~~~~~V~l~  388 (414)
T KOG2687|consen  309 RLARFIIPSAVTLEHVPKSVSPDGNISSAPKDFDVFGSTQDCTEEEVLLGEFTYDLDGSPIQTFSLQHDTSAPFKTVELR  388 (414)
T ss_pred             EecceEEeeeeeeecccceecCCCCcCcCCcceEEEeecccCCcCceeeEEEEECCCCCcceEEeccCCCccccceEEEE
Confidence            999999999999999999999999999999999999999976777899999999999999999999987 6679999999


Q ss_pred             EeecCCCCCCceEEEEEEeeeeCCC
Q psy13339        220 ILSNHGNIEYTCLYRFRVHGNLAPS  244 (365)
Q Consensus       220 i~SN~G~~~yTClYR~RVhG~~~~~  244 (365)
                      |+||||+++|||||||||||+++++
T Consensus       389 ~~SN~G~p~fTCiYR~RVhG~~~~~  413 (414)
T KOG2687|consen  389 FNSNHGHPKFTCIYRFRVHGRPVDP  413 (414)
T ss_pred             EecCCCCCCceEEEEEEEcCccCCC
Confidence            9999999999999999999997654

>PF07738 Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: IPR012919 The Caenorhabditis elegans UNC-84 protein is a nuclear envelope protein that is involved in nuclear anchoring and migration during development Back     alignment and domain information
>KOG2687|consensus Back     alignment and domain information
>PF07738 Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: IPR012919 The Caenorhabditis elegans UNC-84 protein is a nuclear envelope protein that is involved in nuclear anchoring and migration during development Back     alignment and domain information
>cd00057 FA58C Substituted updates: Jan 31, 2002 Back     alignment and domain information
>KOG1396|consensus Back     alignment and domain information
>TIGR02961 allantoicase allantoicase Back     alignment and domain information
>cd08366 APC10 APC10 subunit of the anaphase-promoting complex (APC) that mediates substrate ubiquitination Back     alignment and domain information
>PF00754 F5_F8_type_C: F5/8 type C domain; InterPro: IPR000421 Blood coagulation factors V and VIII contain a C-terminal, twice repeated, domain of about 150 amino acids, which is called F5/8 type C, FA58C, or C1/C2- like domain Back     alignment and domain information
>PRK13257 allantoicase; Provisional Back     alignment and domain information
>cd08667 APC10-ZZEF1 APC10/DOC1-like domain of uncharacterized Zinc finger ZZ-type and EF-hand domain-containing protein 1 (ZZEF1) and homologs Back     alignment and domain information
>cd08159 APC10-like APC10-like DOC1 domains in E3 ubiquitin ligases that mediate substrate ubiquitination Back     alignment and domain information
>PRK13797 putative bifunctional allantoicase/OHCU decarboxylase; Provisional Back     alignment and domain information
>cd08365 APC10-like1 APC10-like DOC1 domains of E3 ubiquitin ligases that mediate substrate ubiquitination Back     alignment and domain information
>cd08665 APC10-CUL7 APC10-like DOC1 domain of CUL7, subunit of the SCF-ROC1-like E3 ubiquitin ligase complex that mediates substrate ubiquitination Back     alignment and domain information
>PF03256 APC10: Anaphase-promoting complex, subunit 10 (APC10); InterPro: IPR004939 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase Back     alignment and domain information
>PF06201 PITH: PITH domain; InterPro: IPR010400 The full-length, Txnl1, protein which is a probable component of the 32 kDa 26S proteasome, uses its C-terminal, PITH, domain to associate specifically with the 26S proteasome Back     alignment and domain information
>cd08666 APC10-HECTD3 APC10-like DOC1 domain of HECTD3, a HECT E3 ubiquitin ligase protein that mediates substrate ubiquitination Back     alignment and domain information
>PRK13257 allantoicase; Provisional Back     alignment and domain information
>PRK13797 putative bifunctional allantoicase/OHCU decarboxylase; Provisional Back     alignment and domain information
>PF03561 Allantoicase: Allantoicase repeat; InterPro: IPR015908 Allantoicase (also known as allantoate amidinohydrolase) is involved in purine degradation, facilitating the utilization of purines as secondary nitrogen sources under nitrogen-limiting conditions Back     alignment and domain information
>TIGR02961 allantoicase allantoicase Back     alignment and domain information
>cd08664 APC10-HERC2 APC10-like DOC1 domain present in HERC2 (HECT domain and RLD2) Back     alignment and domain information
>KOG3437|consensus Back     alignment and domain information
>PF06588 Muskelin_N: Muskelin N-terminus; InterPro: IPR010565 This entry represents the N-terminal region of muskelin and is found in conjunction with several IPR006652 from INTERPRO repeats Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
4fi9_A195 Structure Of Human Sun-Kash Complex Length = 195 6e-43
4fi9_A195 Structure Of Human Sun-Kash Complex Length = 195 1e-08
4dxt_A198 Human Sun2 (Aa 522-717) Length = 198 6e-43
4dxt_A198 Human Sun2 (Aa 522-717) Length = 198 1e-08
3unp_A203 Structure Of Human Sun2 Sun Domain Length = 203 6e-43
3unp_A203 Structure Of Human Sun2 Sun Domain Length = 203 2e-08
4dxr_A202 Human Sun2-Kash1 Complex Length = 202 7e-43
4dxr_A202 Human Sun2-Kash1 Complex Length = 202 2e-08
>pdb|4FI9|A Chain A, Structure Of Human Sun-Kash Complex Length = 195 Back     alignment and structure 
Iteration: 1

 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 84/169 (49%), Positives = 111/169 (65%), Gaps = 3/169 (1%)
Query: 76  HILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAI 135
           + L     SVI  RC+ETY  K     LFG  LW    SPR  +QP + PG+CWAFQG  
Sbjct: 27  YALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQ 86
Query: 136 GCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYD 195
           G  V++LS RI+ T  ++EH+PKAL+PN  I SAPK FA++G  E   +  TLLG+F YD
Sbjct: 87  GFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYD 146
Query: 196 SEGPTLQ--YFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 242
            +G  +Q  +F+A  +A T+ +VEL+IL+N G+ EYTC+YRFRVHG  A
Sbjct: 147 QDGEPIQTFHFQAPTMA-TYQVVELRILTNWGHPEYTCIYRFRVHGEPA 194
>pdb|4FI9|A Chain A, Structure Of Human Sun-Kash Complex Length = 195 Back     alignment and structure
>pdb|4DXT|A Chain A, Human Sun2 (Aa 522-717) Length = 198 Back     alignment and structure
>pdb|4DXT|A Chain A, Human Sun2 (Aa 522-717) Length = 198 Back     alignment and structure
>pdb|3UNP|A Chain A, Structure Of Human Sun2 Sun Domain Length = 203 Back     alignment and structure
>pdb|3UNP|A Chain A, Structure Of Human Sun2 Sun Domain Length = 203 Back     alignment and structure
>pdb|4DXR|A Chain A, Human Sun2-Kash1 Complex Length = 202 Back     alignment and structure
>pdb|4DXR|A Chain A, Human Sun2-Kash1 Complex Length = 202 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
4dxt_A198 SUN domain-containing protein 2; beta-sandwich, LI 2e-59
4dxt_A198 SUN domain-containing protein 2; beta-sandwich, LI 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* Length = 198 Back     alignment and structure
 Score =  189 bits (481), Expect = 2e-59
 Identities = 81/161 (50%), Positives = 104/161 (64%), Gaps = 1/161 (0%)

Query: 83  GSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIGCLVLKL 142
            SVI  RC+ETY  K     LFG  LW    SPR  +QP + PG+CWAFQG  G  V++L
Sbjct: 37  ASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFAVVRL 96

Query: 143 SHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQ 202
           S RI+ T  ++EH+PKAL+PN  I SAPK FA++G  E   +  TLLG+F YD +G  +Q
Sbjct: 97  SARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQ 156

Query: 203 YFE-AKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 242
            F        T+ +VEL+IL+N G+ EYTC+YRFRVHG  A
Sbjct: 157 TFHFQAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPA 197
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* Length = 198 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
4dxt_A198 SUN domain-containing protein 2; beta-sandwich, LI 100.0
4dxt_A198 SUN domain-containing protein 2; beta-sandwich, LI 99.92
2yc2_A139 IFT25, intraflagellar transport protein 25; transp 99.54
1tvg_A153 LOC51668 protein; cell cycle, structural genomics, 98.79
3f2z_A159 Uncharacterized protein BF3579; the present C-term 97.9
3ggl_A169 Putative chitobiase; X-RAY, structure genomics, NE 97.76
2jda_A145 Yecbm32; hypothetical protein, carbohydrate- bindi 97.59
2j1a_A150 Hyaluronidase, CBM32; protein-carbohydrate interac 97.25
1jhj_A171 APC10; beta sandwich, jellyroll, cell cycle; 1.60A 97.09
4a41_A161 GH89_CBM32-5, alpha-N-acetylglucosaminidase family 96.93
1o59_A355 Allantoicase; YIR029W, structural genomics, JCSG, 96.79
2yc2_A139 IFT25, intraflagellar transport protein 25; transp 96.7
2v72_A143 CBM32, EXO-alpha-sialidase; galactose, bacterial p 96.57
3hnm_A172 Putative chitobiase; PSI-2, protein structure init 96.38
1w8o_A601 Bacterial sialidase; 3D-structure, glycosidase, hy 96.14
1gqp_A221 DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, 95.35
4a3z_A161 GH89_CBM32, alpha-N-acetylglucosaminidase family p 95.14
1k3i_A 656 Galactose oxidase precursor; blade beta propeller, 94.97
2v5d_A737 O-GLCNACASE NAGJ; family 32 carbohydrate binding m 94.03
1xoy_A161 Hypothetical protein AT3G04780.1; structural genom 93.66
1wwy_A171 Thioredoxin-like protein 1; structural genomics, h 93.09
4a42_A149 GH89_CBM32-4, alpha-N-acetylglucosaminidase family 92.26
1k12_A158 Lectin; beta barrel, protein carbohydrate complex, 91.66
1o59_A355 Allantoicase; YIR029W, structural genomics, JCSG, 91.16
3cqo_A293 FBP32; F-lectin, fucolectin, sugar binding protein 90.96
4a4a_A 914 Alpha-N-acetylglucosaminidase family protein; hydr 90.84
3eyp_A469 Putative alpha-L-fucosidase; structural genomics, 90.79
2qqi_A318 Neuropilin-1; VEGF receptor, semaphorin receptor, 90.32
3lei_A153 Platelet aggregation factor SM-HPAF; lectin domain 87.95
2j1v_A151 Fucolectin-related protein; carbohydrate-binding p 83.82
3cqo_A293 FBP32; F-lectin, fucolectin, sugar binding protein 83.75
3ues_A478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 82.96
2wuh_A178 Discoidin domain receptor 2; receptor-peptide comp 82.18
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A Back     alignment and structure
Probab=100.00  E-value=9e-57  Score=411.80  Aligned_cols=193  Identities=45%  Similarity=0.811  Sum_probs=181.0

Q ss_pred             eecHHHHHHhhchhhHHHHHHhccccccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCC
Q psy13339         47 VRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPG  126 (365)
Q Consensus        47 i~N~evl~~l~~~~~il~~i~~drl~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG  126 (365)
                      ++.++|.+-+   +++++++.+|+++++|||+...||+|+.++||+||..++++.++||+++|..+++|++||+|+..||
T Consensus         4 ~~~~~v~~~v---~~~l~~~~~D~~g~~DyAl~s~Ga~Ii~~~tS~ty~~~~~~~s~~g~~~~~~~~~P~~~L~p~~~pG   80 (198)
T 4dxt_A            4 VTEEQVHHIV---KQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPG   80 (198)
T ss_dssp             CCHHHHHHHH---HHHHHHHHTTTTCCCCTTCGGGTCEEEEEEECCBCCTTHHHHTTTCCCSSCCCCCGGGGGSSCCSTT
T ss_pred             CCHHHHHHHH---HHHHHHHhccccCCcCeEcccCCcEEcCcccCCCccCCCceeeecCccccccCCCchheEcCCCCCc
Confidence            4556774433   5789999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             CeeeccCCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEe
Q psy13339        127 DCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEA  206 (365)
Q Consensus       127 ~CW~f~Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v  206 (365)
                      +||||+|++|+|+|+|+++|+|++|||||+++.++|+++++||||+|+|||+.++.++++++||+|+||.+|.++|+|.|
T Consensus        81 ~CW~f~g~~g~l~I~Ls~~I~~~~VtieHi~~~~sp~~~~~SAPKdf~V~g~~~~~~~~~~~Lg~f~Y~~~~~~~QtF~l  160 (198)
T 4dxt_A           81 NCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHF  160 (198)
T ss_dssp             CSEEEETTCEEEEEEEEEEEEEEEEEEECCCGGGSGGGCCTTSBCEEEEEEESSSSCCCCEEEEEEECCTTSCSEEEEEC
T ss_pred             ceeecCCCcceeeeecCCeEEEEEEEEEcCchhcccccCcCCCCcEEEEEEEcCCCCCCcEEEEEEEECCCCCcceEEEe
Confidence            99999999999999999999999999999999999988999999999999999998888999999999999999999999


Q ss_pred             cCC-CcceeEEEEEEeecCCCCCCceEEEEEEeeeeC
Q psy13339        207 KMV-ADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA  242 (365)
Q Consensus       207 ~~~-~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~  242 (365)
                      +.. ...+++|+|||+|||||++|||||||||||+++
T Consensus       161 ~~~~~~~~~~V~l~i~SN~G~~~~TClYr~RVhG~~~  197 (198)
T 4dxt_A          161 QAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPA  197 (198)
T ss_dssp             SSCCSCCEEEEEEEECCBSSCSSEEEECEEEEEEECC
T ss_pred             CCCCCcceeEEEEEEECCCCCCCcEEEEEEEEcCEeC
Confidence            976 568999999999999999999999999999985
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A Back     alignment and structure
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A Back     alignment and structure
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A Back     alignment and structure
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A Back     alignment and structure
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A Back     alignment and structure
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A* Back     alignment and structure
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9 Back     alignment and structure
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A* Back     alignment and structure
>1o59_A Allantoicase; YIR029W, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics, hydrolase; 2.40A {Saccharomyces cerevisiae} SCOP: b.18.1.22 b.18.1.22 PDB: 1sg3_A Back     alignment and structure
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A Back     alignment and structure
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens} Back     alignment and structure
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* Back     alignment and structure
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9 Back     alignment and structure
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A* Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} Back     alignment and structure
>1xoy_A Hypothetical protein AT3G04780.1; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: b.18.1.26 Back     alignment and structure
>1wwy_A Thioredoxin-like protein 1; structural genomics, hypothetical protein, regulatory protei apoptosis, cancer; NMR {Homo sapiens} Back     alignment and structure
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens} Back     alignment and structure
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15 Back     alignment and structure
>1o59_A Allantoicase; YIR029W, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics, hydrolase; 2.40A {Saccharomyces cerevisiae} SCOP: b.18.1.22 b.18.1.22 PDB: 1sg3_A Back     alignment and structure
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis} Back     alignment and structure
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A Back     alignment and structure
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A* Back     alignment and structure
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A* Back     alignment and structure
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis} Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
d1tvga_136 Placental protein 25, pp25 {Human (Homo sapiens) [ 98.53
d1w8oa2142 Sialidase, C-terminal domain {Micromonospora virid 97.64
d1jhja_161 APC10/DOC1 subunit of the anaphase-promoting compl 97.46
d1gqpa_194 APC10/DOC1 subunit of the anaphase-promoting compl 97.36
d1k3ia2162 Galactose oxidase, N-terminal domain {Fungi (Fusar 97.3
d1o59a1188 Allantoicase {Baker's yeast (Saccharomyces cerevis 97.16
d1o59a2150 Allantoicase {Baker's yeast (Saccharomyces cerevis 94.2
d1xoya_161 Hypothetical protein AT3g04780/F7O18_27 {Thale cre 93.15
d1k12a_158 Fucose binding lectin {European eel (Anguilla angu 87.99
d2qqia2155 B1 domain of neuropilin-1 {Human (Homo sapiens) [T 81.99
>d1tvga_ b.18.1.9 (A:) Placental protein 25, pp25 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Galactose-binding domain-like
superfamily: Galactose-binding domain-like
family: APC10-like
domain: Placental protein 25, pp25
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.8e-06  Score=70.92  Aligned_cols=134  Identities=14%  Similarity=0.163  Sum_probs=94.9

Q ss_pred             cceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCCCeeeccCCce-EEEEEcCceeEEEEEE
Q psy13339         74 LGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAIG-CLVLKLSHRIQVTRFS  152 (365)
Q Consensus        74 ~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG~CW~f~Gs~G-~L~I~Ls~~I~~~~vs  152 (365)
                      +|+++-..|+.|+..  |...                ...+|+.+++.+  +..+|...|..+ .|.|.|.++..++.|.
T Consensus         1 ~d~~l~~~G~~v~~~--ss~~----------------~~~~~~~~iDgd--~~T~W~s~~~~p~~i~idl~~~~~i~~i~   60 (136)
T d1tvga_           1 IDLCLSSEGSEVILA--TSSD----------------EKHPPENIIDGN--PETFWTTTGMFPQEFIICFHKHVRIERLV   60 (136)
T ss_dssp             CBTTCGGGTCEEECC--SCCC----------------TTSCGGGGGSSC--TTCCEECCSCSSEEEEEEEEEEEEEEEEE
T ss_pred             CceeeccCCcEEEEE--ecCC----------------CCCCHHheEcCC--CCceeecCCCCcEEEEEECCCeEEEeeEE
Confidence            477888889888742  2111                235788888654  567999988766 5999999999999999


Q ss_pred             EEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceE
Q psy13339        153 MEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCL  232 (365)
Q Consensus       153 ieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTCl  232 (365)
                      +..-          ...+.+|++..  ..+...+..+++.+....+...|.-.+.. ....++|+|+++++||+  +..+
T Consensus        61 i~~~----------~~~~~~~~i~~--s~Dg~~w~~v~~~~~~~~~~~~~~~~~~~-~~~aryvR~~i~s~~g~--~~~i  125 (136)
T d1tvga_          61 IQSY----------FVQTLKIEKST--SKEPVDFEQWIEKDLVHTEGQLQNEEIVA-HGSATYLRFIIVSAFDH--FASV  125 (136)
T ss_dssp             EEEE----------SEEEEEEEEEC--SSSSCCCEEEEEEECCCCTTCCEEEEECC-CEEEEEEEEEEEEESSS--CCEE
T ss_pred             EEec----------ccceeEEEEEE--ccCCceeEEEEEecccCCCCcceEEecCC-ccEEEEEEEEEEeccCC--cEEE
Confidence            9742          12334444433  33344588999988877654444433333 23469999999999995  8999


Q ss_pred             EEEEEeeeeC
Q psy13339        233 YRFRVHGNLA  242 (365)
Q Consensus       233 YR~RVhG~~~  242 (365)
                      |.|+|+|..+
T Consensus       126 ~ev~v~G~~v  135 (136)
T d1tvga_         126 HSVSAEGTVV  135 (136)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEEEeEEc
Confidence            9999999864
>d1w8oa2 b.18.1.1 (A:506-647) Sialidase, C-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d1jhja_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gqpa_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1o59a1 b.18.1.22 (A:0-187) Allantoicase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1o59a2 b.18.1.22 (A:194-343) Allantoicase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xoya_ b.18.1.26 (A:) Hypothetical protein AT3g04780/F7O18_27 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1k12a_ b.18.1.15 (A:) Fucose binding lectin {European eel (Anguilla anguilla) [TaxId: 7936]} Back     information, alignment and structure
>d2qqia2 b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure