Diaphorina citri psyllid: psy13352

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-
MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKKEEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKNDFILEMEKQRNNARLNSKFKDIKLNII
ccHHHHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHcccccccEEEccccccccccccccccccccccccccccccEECcccccccccccccccccccEEEEEEEEHHHccccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccEEEEccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccc
**SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKKEEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKNDFILE****************IKLNII
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MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKKEEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKNDFILEMEKQRNNARLNSKFKDIKLNII

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Alanine--tRNA ligase Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.confidentQ129G8
Alanine--tRNA ligase Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.confidentA9C0B9
Alanine--tRNA ligase Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.confidentQ8ZMK6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0001141 [MF]bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcriptionprobableGO:0003700, GO:0001131, GO:0001130, GO:0003674, GO:0001071, GO:0001217
GO:0016020 [CC]membraneprobableGO:0005575
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0045892 [BP]negative regulation of transcription, DNA-dependentprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.1.-.-1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.probable
6.1.1.-Ligases forming aminoacyl-tRNA and related compounds.probable
6.1.1.7Alanine--tRNA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3HY0, chain A
Confidence level:very confident
Coverage over the Query: 1-426
View the alignment between query and template
View the model in PyMOL