Diaphorina citri psyllid: psy13439

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-

MDHEDNQHESLKKKRKLLTVYLHSKNEVLSVENGKWNGLIADLVNRKTDMALTSLVINSRRESVVDFTVPIMETGIAIVVAKRTGIISPTAFLEPFDTASWMLVGVVAIQASAFTIFFFEWLSPSGFDMKISFSYRPLPFLPPEPFDTASWMLVGVVAIQASAFTIFFFEWLSPSGFDMKTTALQPSHRFSLFRTYWLVWAVLFQAAVHIDTPKGFTAKFMTNMWAMFAVVFLAIYTANLAAFMITREEFHEFTGVDDVRI

ccccccccccHHHHHHcEEEEEccccccccccccccHHHHHHHHcccccEEEEcccccccHHcccccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc

***E*N*HESLKKKRKLLTVYLHSKNEVLSVENGKWNGLIADLVNRKTDMALTSLVINSRRESVVDFTVPIMETGIAIVVAKRTGIISPTAFLEPFDTASWMLVGVVAIQASAFTIFFFEWLSPSGFDMKISFSYRPLPFLPPEPFDTASWMLVGVVAIQASAFTIFFFEWLSP******TTALQPSHRFSLFRTYWLVWAVLFQAAVHIDTPKGFTAKFMTNMWAMFAVVFLAIYTANLAAFMITREEFHEFTGVDDVRI

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxx

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0035235 [BP]	ionotropic glutamate receptor signaling pathway	probable	GO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0007215, GO:0050789, GO:0044699
GO:0044422 [CC]	organelle part	probable	GO:0005575, GO:0043226
GO:0050975 [BP]	sensory perception of touch	probable	GO:0032501, GO:0044707, GO:0050954, GO:0007600, GO:0008150, GO:0050877, GO:0044699, GO:0003008
GO:0045211 [CC]	postsynaptic membrane	probable	GO:0097060, GO:0044456, GO:0016020, GO:0005575, GO:0045202
GO:0043232 [CC]	intracellular non-membrane-bounded organelle	probable	GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0045471 [BP]	response to ethanol	probable	GO:1901700, GO:0050896, GO:0008150, GO:0042221, GO:0097305, GO:0010033
GO:0043197 [CC]	dendritic spine	probable	GO:0044309, GO:0044463, GO:0044464, GO:0030425, GO:0005575, GO:0097458, GO:0005623, GO:0043005, GO:0042995
GO:0044444 [CC]	cytoplasmic part	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0043169 [MF]	cation binding	probable	GO:0003674, GO:0005488, GO:0043167
GO:0005230 [MF]	extracellular ligand-gated ion channel activity	probable	GO:0022891, GO:0022892, GO:0005215, GO:0005216, GO:0015276, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0022836, GO:0022834, GO:0022803, GO:0022839, GO:0022838
GO:0017146 [CC]	N-methyl-D-aspartate selective glutamate receptor complex	probable	GO:0043234, GO:0043235, GO:0032991, GO:0008328, GO:0044459, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005887, GO:0005886, GO:0044425, GO:0031226, GO:0031224
GO:0072375 [BP]	medium-term memory	probable	GO:0032501, GO:0044707, GO:0044708, GO:0050896, GO:0050890, GO:0007613, GO:0007610, GO:0007611, GO:0008150, GO:0050877, GO:0044699, GO:0003008

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KG2, chain A
Confidence level:very confident
Coverage over the Query: 9-119,186-260
View the alignment between query and template
View the model in PyMOL