Diaphorina citri psyllid: psy1343

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------

ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG

cccccHHHHHHHccccHHHHccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccEEccccccccHHHHHcEEcccccccCEccccccccccccccccccccccHcccccccccHHHHcccccccccccccccccccEEEEEccccccEEEEEEccccccccccccccEEEEcccccccccccccccHHHHcccHHHHHHHcccccccEEEEEEEEECccccccEEEEEEEEcccccEEEEEccEEEEcccccccccccEEEEEEECccccccccccc

ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK*****TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR***********

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ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVExxxxxxxxxxxxxxxxxxxxxSPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
U4/U6.U5 tri-snRNP-associated protein 2	May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs).	confident	Q53GS9
U4/U6.U5 tri-snRNP-associated protein 2	May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs).	confident	Q3TIX9
U4/U6.U5 tri-snRNP-associated protein 2	May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs).	confident	Q5R761

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0071011 [CC]	precatalytic spliceosome	probable	GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0043484 [BP]	regulation of RNA splicing	probable	GO:0080090, GO:0019222, GO:0060255, GO:0051252, GO:0031323, GO:0050794, GO:0050789, GO:0019219, GO:0065007, GO:0051171, GO:0008150, GO:0010468
GO:0048855 [BP]	adenohypophysis morphogenesis	probable	GO:0021536, GO:0021983, GO:0009653, GO:0007275, GO:0021984, GO:0007417, GO:0048513, GO:0044699, GO:0022612, GO:0032502, GO:0009887, GO:0032501, GO:0044767, GO:0035270, GO:0008150, GO:0007420, GO:0044707, GO:0048854, GO:0048856, GO:0048850, GO:0048853, GO:0048852, GO:0007399, GO:0030900, GO:0048731, GO:0048732
GO:0004221 [MF]	ubiquitin thiolesterase activity	probable	GO:0016787, GO:0003674, GO:0016790, GO:0016788, GO:0003824
GO:0006511 [BP]	ubiquitin-dependent protein catabolic process	probable	GO:0051603, GO:1901575, GO:0044265, GO:0044260, GO:0044267, GO:0019538, GO:0009056, GO:0009987, GO:0019941, GO:0044237, GO:0043170, GO:0044248, GO:0071704, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0006508, GO:0043632, GO:0044238, GO:0009057

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2Y6E, chain A
Confidence level:very confident
Coverage over the Query: 1-113,130-156,171-248,264-328
View the alignment between query and template
View the model in PyMOL

Template: 2HD5, chain A
Confidence level:probable
Coverage over the Query: 1-96,109-326
View the alignment between query and template
View the model in PyMOL