Diaphorina citri psyllid: psy1361
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| DNA polymerase alpha catalytic subunit | Plays an essential role in the initiation of DNA replication. During the S phase of the cell cycle, the DNA polymerase alpha complex (composed of a catalytic subunit POLA1/p180, a regulatory subunit POLA2/p70 and two primase subunits PRIM1/p49 and PRIM2/p58) is recruited to DNA at the replicative forks via direct interactions with MCM10 and WDHD1. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. These primers are initially extended by the polymerase alpha catalytic subunit and subsequently transferred to polymerase delta and polymerase epsilon for processive synthesis on the lagging and leading strand, respectively. The reason this transfer occurs is because the polymerase alpha has limited processivity and lacks intrinsic 3' exonuclease activity for proofreading error, and therefore is not well suited for replicating long complexes. | confident | P09884 |
| DNA polymerase alpha catalytic subunit (Fragment) | Plays an essential role in the initiation of DNA replication. During the S phase of the cell cycle, the DNA polymerase alpha complex (composed of a catalytic subunit POLA1/p180, a regulatory subunit POLA2/p70 and two primase subunits PRIM1/p49 and PRIM2/p58) is recruited to DNA at the replicative forks via direct interactions with MCM10 and WDHD1. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. These primers are initially extended by the polymerase alpha catalytic subunit and subsequently transferred to polymerase delta and polymerase epsilon for processive synthesis on the lagging and leading strand, respectively. The reason this transfer occurs is because the polymerase alpha has limited processivity and lacks intrinsic 3' exonuclease activity for proofreading error, and therefore is not well suited for replicating long complexes. | confident | O89042 |
| DNA polymerase alpha catalytic subunit | Plays an essential role in the initiation of DNA replication. During the S phase of the cell cycle, the DNA polymerase alpha complex (composed of a catalytic subunit POLA1/p180, a regulatory subunit POLA2/p70 and two primase subunits PRIM1/p49 and PRIM2/p58) is recruited to DNA at the replicative forks via direct interactions with MCM10 and WDHD1. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. These primers are initially extended by the polymerase alpha catalytic subunit and subsequently transferred to polymerase delta and polymerase epsilon for processive synthesis on the lagging and leading strand, respectively. The reason this transfer occurs is because the polymerase alpha has limited processivity and lacks intrinsic 3' exonuclease activity for proofreading error, and therefore is not well suited for replicating long complexes. | confident | P33609 |
Prediction of Gene Ontology Terms
| GO Term | Description | Confidence Level | Parent GO Terms |
| GO:0031981 [CC] | nuclear lumen | probable | GO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422 |
| GO:0006260 [BP] | DNA replication | probable | GO:0071704, GO:1901576, GO:0044238, GO:0008152, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0044249, GO:0009058, GO:0009059, GO:0006807, GO:0034645, GO:0006259, GO:0008150, GO:1901360, GO:0046483 |
| GO:0043232 [CC] | intracellular non-membrane-bounded organelle | probable | GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226 |
| GO:0005737 [CC] | cytoplasm | probable | GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622 |
| GO:0003674 [MF] | molecular_function | probable |
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 2.-.-.- | Transferases. | probable | |||||||||
| 2.7.-.- | Transferring phosphorous-containing groups. | probable | |||||||||
| 2.7.7.- | Nucleotidyltransferases. | probable | |||||||||
| 2.7.7.7 | DNA-directed DNA polymerase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 1S5J, chain A Confidence level:very confident Coverage over the Query: 560-610,629-911 View the alignment between query and template View the model in PyMOL |
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Template: 3IAY, chain A Confidence level:very confident Coverage over the Query: 560-603,621-1017 View the alignment between query and template View the model in PyMOL |
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Template: 3FLO, chain B Confidence level:very confident Coverage over the Query: 1055-1223 View the alignment between query and template View the model in PyMOL |
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Template: 4B08, chain A Confidence level:confident Coverage over the Query: 550-600,631-1013 View the alignment between query and template View the model in PyMOL |