Diaphorina citri psyllid: psy13746


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
MSNVASFPAQGGFYPDGIIGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPAHAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRIQFAVLNECYHLVHDGVLSAKDIDRVMSEGLGLRYAFLGPLETIHLNSA
ccccccccccccCEEEEEEcHHcHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccccccccHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHcccccccCEEEEccccccccccEEEEcccccccHHHHHHHHHHHHHcccCEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccHHHHcccccc
*********QGGFYPDGIIGLIGQAWAMIFASAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPAHAGYKVSLYDVLSEQIENAKNTIQHTLQDYHQKGCLKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRIQFAVLNECYHLVHDGVLSAKDIDRVMSEGLGLRYAFLGPLETIHLNS*
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MSNVASFPAQGGFYPDGIIGLIGQAWAMIFASAGYKVSLxxxxxxxxxxxxxxxxxxxxxYHQKGCLKGSLSPAHAGYKVSLxxxxxxxxxxxxxxxxxxxxxYHQKGCLKGSLSPEEQFGLISGTPVLRECLEDAIFIQESVPEILQIKHQVYRAIDIFMSSNTILSSSTSSFLPSVLSEHSTHRSQFIVAHPVNPPYFIPLVEIVPAAWTSERVITRTREIMTEIGMKPVTLTTEIRGFALNRIQFAVLNECYHLVHDGVLSAKDIDRVMSEGLGLRYAFLGPLETIHLNSA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Lambda-crystallin homolog confidentQ811X6
Probable 3-hydroxybutyryl-CoA dehydrogenase confidentQ9RVG1
L-carnitine dehydrogenase Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine.confidentD7B2S5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0050104 [MF]L-gulonate 3-dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016616, GO:0016491
GO:0044446 [CC]intracellular organelle partprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043226, GO:0044422
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0070403 [MF]NAD+ bindingprobableGO:0043168, GO:0050662, GO:0051287, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0097159, GO:0003674, GO:0043167, GO:1901363, GO:1901265

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MOG, chain A
Confidence level:very confident
Coverage over the Query: 12-55,99-293
View the alignment between query and template
View the model in PyMOL
Template: 3F3S, chain A
Confidence level:confident
Coverage over the Query: 20-34,78-293
View the alignment between query and template
View the model in PyMOL