Diaphorina citri psyllid: psy13778

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----

MSSDQCYYRVRCRYTRYPPPHPMWYAATAARRMSAWFLAARELWNQIYWTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPRYKEKELVERSAYGETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGPSHSKRMRGTRELLTMKLDSCLHFPRQRGSPWTVS

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

M*SDQCYYRVRCRY**YPP***********************LWNQIYWTLLQGPTLLQ********************************************************************************************************************************************************************************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0051716 [BP]	cellular response to stimulus	probable	GO:0008150, GO:0050896, GO:0009987, GO:0044763, GO:0044699
GO:0048407 [MF]	platelet-derived growth factor binding	probable	GO:0003674, GO:0019838, GO:0005515, GO:0005488
GO:0006461 [BP]	protein complex assembly	probable	GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0048523 [BP]	negative regulation of cellular process	probable	GO:0008150, GO:0048519, GO:0065007, GO:0050789, GO:0050794
GO:0043234 [CC]	protein complex	probable	GO:0005575, GO:0032991
GO:0044430 [CC]	cytoskeletal part	probable	GO:0005856, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0043226, GO:0044422
GO:0005581 [CC]	collagen	probable	GO:0005578, GO:0031012, GO:0005575, GO:0005576, GO:0044420, GO:0044421
GO:0044238 [BP]	primary metabolic process	probable	GO:0008150, GO:0008152
GO:0005604 [CC]	basement membrane	probable	GO:0005578, GO:0031012, GO:0005575, GO:0005576, GO:0044420, GO:0044421
GO:0019222 [BP]	regulation of metabolic process	probable	GO:0008150, GO:0065007, GO:0050789
GO:0048518 [BP]	positive regulation of biological process	probable	GO:0008150, GO:0065007, GO:0050789
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0044444 [CC]	cytoplasmic part	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0044260 [BP]	cellular macromolecule metabolic process	probable	GO:0009987, GO:0044237, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0015630 [CC]	microtubule cytoskeleton	probable	GO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WCK, chain A
Confidence level:very confident
Coverage over the Query: 231-251
View the alignment between query and template
View the model in PyMOL

Template: 1O91, chain A
Confidence level:probable
Coverage over the Query: 227-293
View the alignment between query and template
View the model in PyMOL

Template: 1RM1, chain C
Confidence level:probable
Coverage over the Query: 204-251
View the alignment between query and template
View the model in PyMOL