Diaphorina citri psyllid: psy13780

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
MSADVDKAVESAKAAFKRGSVWRNLDASGRGKLIYKLAELIDKNVDYLASLETLDNGKPYEDSIFDLGCASDTFRYFAGWCDKIEGSTIPSESKDNIGNK
ccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
MSADVDKAVESAKAAFKRGSVWRNLDASGRGKLIYKLAELIDKNVDYLASLETLDNGKPYEDSIFDLGCASDTFRYFAGWCDKIEGSTIPSES*******
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MSADVDKAVESAKAAFKRGSVWRNLDASGRGKLIYKLAELIDKNVDYLASLETLDNGKPYEDSIFDLGCASDTFRYFAGWCDKIEGSTIPSESKDNIGNK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative aldehyde dehydrogenase DhaS confidentO34660
Aldehyde dehydrogenase family 1 member A3 Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Seems to be the key enzyme in the formation of an RA gradient along the dorso-ventral axis during the early eye development and also in the development of the olfactory system.confidentQ8K4D8
Aldehyde dehydrogenase family 1 member A3 Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Seems to be the key enzyme in the formation of an RA gradient along the dorso-ventral axis during the early eye development and also in the development of the olfactory system.confidentP47895

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0004029 [MF]aldehyde dehydrogenase (NAD) activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0004028 [MF]3-chloroallyl aldehyde dehydrogenase activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0048562 [BP]embryonic organ morphogenesisprobableGO:0048598, GO:0032502, GO:0009887, GO:0032501, GO:0044707, GO:0048568, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0048565 [BP]digestive tract developmentprobableGO:0032502, GO:0055123, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0031076 [BP]embryonic camera-type eye developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007423, GO:0048568, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0043010, GO:0007275, GO:0044699
GO:0001822 [BP]kidney developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0001655, GO:0048731, GO:0072001, GO:0007275, GO:0044699
GO:0048386 [BP]positive regulation of retinoic acid receptor signaling pathwayprobableGO:0009966, GO:0009967, GO:0048584, GO:0048583, GO:0050794, GO:0023056, GO:0065007, GO:0023051, GO:0048518, GO:0008150, GO:0010647, GO:0010646, GO:0048385, GO:0050789, GO:0048522
GO:0008285 [BP]negative regulation of cell proliferationprobableGO:0042127, GO:0050794, GO:0008150, GO:0065007, GO:0048519, GO:0050789, GO:0048523
GO:0001889 [BP]liver developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0061008, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0048592 [BP]eye morphogenesisprobableGO:0032502, GO:0009887, GO:0032501, GO:0044707, GO:0007423, GO:0048856, GO:0044767, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0070403 [MF]NAD+ bindingprobableGO:0043168, GO:0050662, GO:0051287, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0097159, GO:0003674, GO:0043167, GO:1901363, GO:1901265
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0008774 [MF]acetaldehyde dehydrogenase (acetylating) activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006805 [BP]xenobiotic metabolic processprobableGO:0051716, GO:0008152, GO:0050896, GO:0009987, GO:0044763, GO:0009410, GO:0044237, GO:0071466, GO:0008150, GO:0070887, GO:0042221, GO:0044699
GO:0042904 [BP]9-cis-retinoic acid biosynthetic processprobableGO:0019752, GO:0044249, GO:0044281, GO:0044283, GO:0042573, GO:0001523, GO:0042445, GO:0044710, GO:0044711, GO:0072330, GO:0042905, GO:0071704, GO:0065007, GO:0016101, GO:0016102, GO:0065008, GO:0006629, GO:1901576, GO:0006721, GO:0006720, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0010817, GO:0034754, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0002138, GO:0016053, GO:0044237, GO:0008299, GO:0016114
GO:0070404 [MF]NADH bindingprobableGO:0043168, GO:0050662, GO:0051287, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0097159, GO:0003674, GO:0043167, GO:1901363, GO:1901265
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0042981 [BP]regulation of apoptotic processprobableGO:0050794, GO:0043067, GO:0008150, GO:0065007, GO:0010941, GO:0050789
GO:0034097 [BP]response to cytokine stimulusprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0006950 [BP]response to stressprobableGO:0050896, GO:0008150
GO:0042574 [BP]retinal metabolic processprobableGO:0044238, GO:0044710, GO:0006081, GO:0006721, GO:0006720, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0016101, GO:0044255, GO:0001523, GO:0006629
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0043009 [BP]chordate embryonic developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0009792, GO:0008150, GO:0007275, GO:0044699
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0030900 [BP]forebrain developmentprobableGO:0032502, GO:0044707, GO:0007420, GO:0007399, GO:0032501, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0030154 [BP]cell differentiationprobableGO:0032502, GO:0048869, GO:0009987, GO:0044763, GO:0008150, GO:0044699
GO:1901615 [BP]organic hydroxy compound metabolic processprobableGO:0071704, GO:0008150, GO:0008152
GO:0035107 [BP]appendage morphogenesisprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0008150, GO:0048736, GO:0009653, GO:0007275, GO:0044699
GO:0016918 [MF]retinal bindingprobableGO:0019840, GO:0008289, GO:0019842, GO:0036094, GO:0003674, GO:0005488, GO:0005501
GO:0045471 [BP]response to ethanolprobableGO:1901700, GO:0050896, GO:0008150, GO:0042221, GO:0097305, GO:0010033
GO:0006807 [BP]nitrogen compound metabolic processprobableGO:0008150, GO:0008152
GO:0002009 [BP]morphogenesis of an epitheliumprobableGO:0032502, GO:0048856, GO:0060429, GO:0009888, GO:0044767, GO:0008150, GO:0048729, GO:0009653, GO:0044699

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1BXS, chain A
Confidence level:very confident
Coverage over the Query: 1-88
View the alignment between query and template
View the model in PyMOL