Diaphorina citri psyllid: psy13788

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030----
DVALTELVKLLIIDEVHLLHGDRGPVIEALVARTLRQIGQEVFKGVKSLNRIQSLVYDTAYHTNENLLICAPTGAGKTNVAMLTIAHQIKQHISQGTEMYNAKHGCYVHIGILDVLQIFGRAGRPQYNTSDLGRTASNYYIKHNDIELFTEHMTKGTEMYNAKHGCYVHIGILDVLQIFGRAGRPQYNTSGHATIITPHEKLNHYLSLLTNQIPIESNFVANLADNLNAEVALGTIGNIDEAVRWLIIYINFVANLADNLNAEVALGTIGNIDEAVRWLSYSYLHVRMRINPREYGISYDEVATDPDLIQHRTTLIENAAQILDKAHMIRFNMRTRDLAITDLGRTASNYYIKHNDIELFTEHMTKVLDDVGILSMISQAHEFEQLKVRDEELHELDNLTQECCEIPIRGGSENVHGKVNILLQTLLSRGRVNSFSLVSDLEYVNQNVIRIIRALFEITLHRNNAIMAARFLKFALMFETKQWPHETPLRQIKLVTNRGYQSPILKPDILNKIEQRGLTVEDLREMPAKEISYMLRDPHVGDKVKQCAWEIPLLEIESKLLPITRTVLKIHLTIKANFSWNDKNKSTYAEPFWIWVEDPDSDFIYHSEYFLLSKKQVITKSEESLIMTIPLSDPLPNQYLIRAMSDRYLGSVVQHSMSFKHLIVPELHPPHTNLLELQPLPVSALQQPQYESLYKFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIAAEITCFRVFKQCPEAKVVYIAPLKALVKERVADWKVKFEARLKKKVVELTGDVTPDIQAISSASVIVTTPEKWDGVSRSWQNRNYVQSVALIIIDEIHLLGEDRGPVLEVIVSRVNFISSYTKRNVRLVGLSTALANAKDLATWLNITKQGMYNFRPSVRPVPLEVHISGFPGKQYCPRMAKMNKPIYTAIKQHSPEKPVMIFVSSRRQTRLTAIDLITILACETNPKMWVHTSDAEMDNIVDNIKDSNLKLTIAFGIGFHHAAAEAAQSSALQMPKLAALSSKENQNVINRSTSANGNFDFNR
ccccccEEcEEEEEEECccccccccccEEHHccccccccccHHccccccccccEEEEEccccccccEEEEccccccHHHHHHHHHHHHHHEEccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHccccHHHHHHHHccccEEEccccccEEEccHHHHHHHHcccccccccccCEEEEEcccccHHHHHHHHcccccEEEcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEcccccEEccHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHccccHHHHHcccHHHHHHHHccccHHHHHHHHHHcccccEEEEEEEEccccEEEEEEEEECcccccccccccccccEEEEEEcccccEEEEEEEEEEccccccccccEEEEEEccccccccccEEEEEEccccccccEEEccccccccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccEEEEccccHHHHHccccccccccEEEEEEEEcEEEcccccccHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHcccccccccccccccccccEEEEEccccccccHHHHHcccHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccHHHHHHHHccEEEEEccccHHHHHHHcccHHHHccccccEEEEEccccCCccccccc
*VALTELVKLLIIDEVHLLHGDRGPVIEALVARTLRQIGQEVFKGVKSLNRIQSLVYDTAYHTNENLLICAPTGAGKTNVAMLTIAHQIKQHISQGTEMYNAKHGCYVHIGILDVLQIFGRAGRPQYNTSDLGRTASNYYIKHNDIELFTEHMTKGTEMYNAKHGCYVHIGILDVLQIFGRAGRPQYNTSGHATIITPHEKLNHYLSLLTNQIPIESNFVANLADNLNAEVALGTIGNIDEAVRWLIIYINFVANLADNLNAEVALGTIGNIDEAVRWLSYSYLHVRMRINPREYGISYDEVATDPDLIQHRTTLIENAAQILDKAHMIRFNMRTRDLAITDLGRTASNYYIKHNDIELFTEHMTKVLDDVGILSMISQAHEFEQLKVRDEELHELDNLTQECCEIPIRGGSENVHGKVNILLQTLLSRGRVNSFSLVSDLEYVNQNVIRIIRALFEITLHRNNAIMAARFLKFALMFETKQWPHETPLRQIKLVTNRGYQSPILKPDILNKIEQRGLTVEDLREMPAKEISYMLRDPHVGDKVKQCAWEIPLLEIESKLLPITRTVLKIHLTIKANFSWNDKNKSTYAEPFWIWVEDPDSDFIYHSEYFLLSKKQVITKSEESLIMTIPLSDPLPNQYLIRAMSDRYLGSVVQHSMSFKHLIVPELHPPHTNLLELQPLPVSALQQPQYESLYKFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIAAEITCFRVFKQCPEAKVVYIAPLKALVKERVADWKVKFEARLKKKVVELTGDVTPDIQAISSASVIVTTPEKWDGVSRSWQNRNYVQSVALIIIDEIHLLGEDRGPVLEVIVSRVNFISSYTKRNVRLVGLSTALANAKDLATWLNITKQGMYNFRPSVRPVPLEVHISGFPGKQYCPRMAKMNKPIYTAIKQHSPEKPVMIFVSSRRQTRLTAIDLITILACETNPKMWVHTSDAEMDNIVDNIKDSNLKLTIAFGIGFHHAAAEAAQSSALQMPKLAALSSKENQNVINRSTSANGNFDFN*
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DVALTELVKLLIIDEVHLLHGDRGPVIEALVARTLRQIGQEVFKGVKSLNRIQSLVYDTAYHTNENLLICAPTGAGKTNVAMLTIAHQIKQHISQGTEMYNAKHGCYVHIGILDVLQIFGRAGRPQYNTSDLGRTASNYYIKHNDIELFTEHMTKGTEMYNAKHGCYVHIGILDVLQIFGRAGRPQYNTSGHATIITPHEKLNHYLSLLTNQIPIESNFVANLADNLNAEVALGTIGNIDEAVRWLIIYINFVANLADNLNAEVALGTIGNIDEAVRWLSYSYLHVRMRINPREYGISYDEVATDPDLIQHRTTLIENAAQILDKAHMIRFNMRTRDLAITDLGRTASNYYIKHNDIELFTEHMTKVLDDVGILSMISQAHEFEQLKVRDEELHELDNLTQECCEIPIRGGSENVHGKVNILLQTLLSRGRVNSFSLVSDLEYVNQNVIRIIRALFEITLHRNNAIMAARFLKFALMFETKQWPHETPLRQIKLVTNRGYQSPILKPDILNKIEQRGLTVEDLREMPAKEISYMLRDPHVGDKVKQCAWEIPLLEIESKLLPITRTVLKIHLTIKANFSWNDKNKSTYAEPFWIWVEDPDSDFIYHSEYFLLSKKQVITKSEESLIMTIPLSDPLPNQYLIRAMSDRYLGSVVQHSMSFKHLIVPELHPPHTNLLELQPLPVSALQQPQYESLYKFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIAAEITCFRVFKQCPEAKVVYIAPLKALVKERVADWKVKFEARLKKKVVELTGDVTPDIQAISSASVIVTTPEKWDGVSRSWQNRNYVQSVALIIIDEIHLLGEDRGPVLEVIVSRVNFISSYTKRNVRLVGLSTALANAKDLATWLNITKQGMYNFRPSVRPVPLEVHISGFPGKQYCPRMAKMNKPIYTAIKQHSPEKPVMIFVSSRRQTRLTAIDLITILACETNPKMWVHTSDAEMDNIVDNIKDSNLKLTIAFGIGFHHAAAEAAQSSALQMPKLAALSSKENQNVINRSTSANGNFDFNR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Activating signal cointegrator 1 complex subunit 3 3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for alkhb3, enabling alkhb3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions.confidentE7F8F4
Activating signal cointegrator 1 complex subunit 3 3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for alkhb3, enabling alkhb3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions.confidentF1NTD6
Activating signal cointegrator 1 complex subunit 3 3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for ALKHB3, enabling ALKHB3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions. Enhances NF-kappa-B, SRF and AP1 transactivation.confidentE1BNG3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006307 [BP]DNA dealkylation involved in DNA repairprobableGO:0035510, GO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0051716, GO:0006304, GO:0044260, GO:0071704, GO:0044699, GO:0006281, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0043412, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0043140 [MF]ATP-dependent 3'-5' DNA helicase activityprobableGO:0008094, GO:0016818, GO:0016462, GO:0008026, GO:0042623, GO:0004003, GO:0016787, GO:0017111, GO:0016817, GO:0004386, GO:0070035, GO:0003674, GO:0016887, GO:0003678, GO:0043138, GO:0003824
GO:0005681 [CC]spliceosomal complexprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0032508 [BP]DNA duplex unwindingprobableGO:0071103, GO:0032392, GO:0044238, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0034641, GO:0006807, GO:0008150, GO:0008152, GO:0006259, GO:1901360, GO:0046483

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2VA8, chain A
Confidence level:very confident
Coverage over the Query: 694-1033
View the alignment between query and template
View the model in PyMOL
Template: 2P6R, chain A
Confidence level:very confident
Coverage over the Query: 3-231,265-292,312-492,503-553
View the alignment between query and template
View the model in PyMOL
Template: 2Q0Z, chain X
Confidence level:very confident
Coverage over the Query: 368-492,503-661
View the alignment between query and template
View the model in PyMOL
Template: 3FHT, chain A
Confidence level:confident
Coverage over the Query: 676-950,985-1033
View the alignment between query and template
View the model in PyMOL
Template: 2XAU, chain A
Confidence level:confident
Coverage over the Query: 107-220,258-291,305-394
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
4f92, chain B very confident Alignment | Template Structure