Diaphorina citri psyllid: psy13959

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAVVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKTGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPILKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVLLLYIQGSSRI
ccccccccccccccccEEccccccccccccccccccccccccEEEEEEEEccccccccEEEEECccccccccEEEEECccccccccEEEEcccccccccccccccccccccEEEEEEECcccccCEECcccccEEEEECcccccEEEEEcccccEEEEcccccEEEEEECccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEcccccccc
**RV*RA**********SHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAVVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKTGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPILKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGG******************GRKVSVLLLYIQGS***
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MGRVIRAQRKGAGSVFRSHNKHRKGAPKLRSLDFAERHGYLKGVVRDIIHDPGRGAPLAVVHFRNPYKFKTNKELFIAPEGMYTGQFVYCGKKATLQIGNVMPVGGMPEGTIVCNLEEKTGDRGRLARASGNYATVIAHNPDTKRTRVKLPSGAKKVIPSANRAMVGIVAGGGRIDKPILKAGRAHYKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVSVLLLYIQGSSRI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
60S ribosomal protein L8 very confidentP62918
60S ribosomal protein L8 very confidentP62919
60S ribosomal protein L8 very confidentQ6P0V6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022625 [CC]cytosolic large ribosomal subunitvery confidentGO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0005840, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0043226, GO:0044424, GO:0015934, GO:0043228, GO:0030529, GO:0032991, GO:0044422
GO:0005774 [CC]vacuolar membraneconfidentGO:0005737, GO:0005575, GO:0031090, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044437, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005886 [CC]plasma membraneconfidentGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0009507 [CC]chloroplastconfidentGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006415 [BP]translational terminationconfidentGO:0043933, GO:0044249, GO:0034645, GO:0043241, GO:0044699, GO:0044267, GO:0032984, GO:0044260, GO:0016043, GO:0008150, GO:0071704, GO:0010467, GO:0071840, GO:1901576, GO:0009987, GO:0009058, GO:0009059, GO:0044763, GO:0008152, GO:0043624, GO:0044238, GO:0071822, GO:0019538, GO:0044237, GO:0043170, GO:0022411, GO:0006412
GO:0051298 [BP]centrosome duplicationconfidentGO:0006996, GO:0031023, GO:0007010, GO:0051297, GO:0009987, GO:0007098, GO:0016043, GO:0008150, GO:0000226, GO:0007017, GO:0044763, GO:0044699, GO:0071840, GO:0022402, GO:0007049
GO:0008361 [BP]regulation of cell sizeconfidentGO:0071840, GO:0009987, GO:0016043, GO:0090066, GO:0065007, GO:0044763, GO:0032535, GO:0008150, GO:0065008, GO:0044699
GO:0040007 [BP]growthconfidentGO:0008150
GO:0006614 [BP]SRP-dependent cotranslational protein targeting to membraneconfidentGO:0008104, GO:0006613, GO:0006612, GO:0044699, GO:0070972, GO:0070727, GO:0006886, GO:0071702, GO:0016482, GO:0006810, GO:0072599, GO:0072594, GO:0034613, GO:0006605, GO:0045184, GO:0015031, GO:0044765, GO:0008150, GO:0051649, GO:0051234, GO:0051179, GO:0051641, GO:0033036, GO:0046907, GO:0045047, GO:0033365, GO:0044763, GO:0009987
GO:0000022 [BP]mitotic spindle elongationconfidentGO:0006996, GO:0044699, GO:0007017, GO:0007010, GO:0000278, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0000226, GO:0008150, GO:0007051, GO:0007052, GO:0022402, GO:0007049, GO:0044763, GO:0051231, GO:0016043
GO:0009792 [BP]embryo development ending in birth or egg hatchingconfidentGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0002181 [BP]cytoplasmic translationconfidentGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576, GO:0006412
GO:0040011 [BP]locomotionconfidentGO:0008150
GO:0008286 [BP]insulin receptor signaling pathwayconfidentGO:0042221, GO:0007169, GO:0070887, GO:0023052, GO:0007165, GO:0007166, GO:0007167, GO:0032869, GO:0032868, GO:0050789, GO:0044699, GO:0009719, GO:0051716, GO:0071375, GO:1901698, GO:0071417, GO:0071310, GO:0065007, GO:0071495, GO:0044700, GO:0009987, GO:0050794, GO:0032870, GO:0044763, GO:0007154, GO:0043434, GO:0010033, GO:1901700, GO:1901701, GO:0009725, GO:0010243, GO:1901699, GO:1901652, GO:1901653, GO:0008150, GO:0050896
GO:0019083 [BP]viral transcriptionconfidentGO:0048610, GO:0032774, GO:0019080, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:1901362, GO:1901360, GO:0006139, GO:0000003, GO:0044260, GO:0071704, GO:0019058, GO:0051704, GO:0018130, GO:1901576, GO:0009987, GO:0006725, GO:0022415, GO:0022414, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044703, GO:0044271, GO:0044237, GO:0043170, GO:0044764, GO:0016032, GO:0019438
GO:0040010 [BP]positive regulation of growth rateconfidentGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0005515 [MF]protein bindingconfidentGO:0003674, GO:0005488
GO:0000184 [BP]nuclear-transcribed mRNA catabolic process, nonsense-mediated decayconfidentGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0006401, GO:0006402, GO:0044238, GO:0009987, GO:0006725, GO:0046700, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0044248, GO:0046483, GO:0016070, GO:0016071, GO:0044270, GO:0044237, GO:0043170, GO:0000956, GO:0019439
GO:0005615 [CC]extracellular spaceconfidentGO:0005575, GO:0005576, GO:0044421
GO:0002119 [BP]nematode larval developmentconfidentGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0003735 [MF]structural constituent of ribosomeconfidentGO:0003674, GO:0005198
GO:0048749 [BP]compound eye developmentconfidentGO:0032502, GO:0032501, GO:0044707, GO:0007423, GO:0048856, GO:0044767, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0006413 [BP]translational initiationconfidentGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0044763, GO:0034645, GO:1901576, GO:0008150, GO:0006412, GO:0044699
GO:0019843 [MF]rRNA bindingconfidentGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0006414 [BP]translational elongationconfidentGO:0071704, GO:0044267, GO:0044238, GO:0008152, GO:0044260, GO:1901576, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:0006412
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0009793 [BP]embryo development ending in seed dormancyprobableGO:0032502, GO:0044767, GO:0032501, GO:0048316, GO:0010154, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0009791, GO:0003006, GO:0008150, GO:0048731, GO:0048608, GO:0009790, GO:0007275, GO:0044699, GO:0000003
GO:0044351 [BP]macropinocytosisprobableGO:0006897, GO:0016192, GO:0006907, GO:0006810, GO:0044765, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A17, chain A
Confidence level:very confident
Coverage over the Query: 2-247
View the alignment between query and template
View the model in PyMOL