Diaphorina citri psyllid: psy13969

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------

MITINPGSNFSMPPPSMSGGGHHHHHHPRGYHGQQFHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEPLNEVGKSTSGPNTNDPSNIPGLDIDSTELQKIIPVKKVPFSKPIPKHFQEAWMNKIIVYDTKVLPVAENDMKALNEAAIKVLMEKVPGTKKIADLNPDAIFVHGKVIKVQKGSELAQVIMRGQKELTRYINSGRIPELEDTVSYIDGEEEWTPQGSGDVDLRGGYPPAMGGRPPGFPGPGGPMFPPGGPPNFPPNFGPGPPGPNFPGGPGPPMFPPGGPGPNFSGSGPPGMFPPGGPPNFGPNGPMGPPSGPSGPMGPPGGPNGPMGPPGGGPGPNFPPGSGGPGNFGPNGPRPNFSGGPKGPNFGPKGPRGPGPNFGPGPNNYGPPNNSGGPPGPNMRDNDDRRGGGGNYNDNSYDNEDGNDWQGGDDNGWGDGGGQNYQNNERYNNDRNNWEEPRRGRGGGKMRGGKRGRGRGGRGKRGM

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEccccccEEccHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccccEEEEEcccCEEEEEECcccccEEEECccccEEEEEEcccccEEEEEcccccEEEEccccccEEccccccccEEEEEEcccccEEEEccccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEccccccccEEEEcccccccccccccccccEEEEEEcccccEEEEEEcccEEEEEEcccccccccccccccccEEEEEEccccccEEEEEcccccEEEEEcccccEEccccccccccEEEEEEcccccEEEEccccccEEEEEccccccccccccccccccEEEEEEccccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEEEEcccccEEEEcccccEEEEccccccccccccccccccEECccEEEEEcccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

***********************************FHHRPNFNKNFHTPFRPFHKNPNQIMDPDFDGKKLRKSSMRKTVDYNAAVINALEARVWQRDYRDRRALQPDVMYYPHMLPPPSFEDNATNAVTTRFVKAATNKMRCPIFSMTWTPEGRRLAHDCAVRHMVWSHNGLWMVTSDHQGYIKYWQSNMNNVKTFQGHKESIRGISFSPSDSKFATCSDDGTVRVWDFYRCTEEKVLRGHGADVKCVDWHPYKSLIVSGSKDNQQPVKLWDPKAGQALATLHAHKSTVMDLAWNQNGNWLVTASRDHLLKVFDIRNLSSEVQTFRGHKKEASAVAWHPQHEGLFSSGGADGSIMFWHVGADKEVGCIPQAHDNIIWTMAWHPLGHILATGSNDHASKFWTRNRLGDPMRDRYNQKGLAHCITGVYNEEMELNDSAVIPGMGLEDEDSVFPSSEPL**************PSNIPGLDIDSTELQKIIPVKKVPFSKPIPKHFQEAWMNKIIVYDTKVLPVAENDMKALNEAAIKVLMEKVPGTKKIADLNPDAIFVHGKVIKVQKGSELAQVIMRGQKELTRYINSGRIPELEDTVSYI*************************************************************************************************************************************************************************************************************************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
pre-mRNA 3' end processing protein WDR33	Essential for both cleavage and polyadenylation of pre-mRNA 3' ends.	confident	Q9C0J8
pre-mRNA 3' end processing protein WDR33	Essential for both cleavage and polyadenylation of pre-mRNA 3' ends.	confident	Q8K4P0

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005737 [CC]	cytoplasm	probable	GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DM0, chain A
Confidence level:very confident
Coverage over the Query: 154-452
View the alignment between query and template
View the model in PyMOL

Template: 3SFZ, chain A
Confidence level:confident
Coverage over the Query: 139-455
View the alignment between query and template
View the model in PyMOL

Template: 3SHF, chain A
Confidence level:probable
Coverage over the Query: 164-357
View the alignment between query and template
View the model in PyMOL