Psyllid ID: psy14043

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-----
Protein Sequence
MNGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLMLT
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccEEcHHHHHHHHHHcccccccEEEEEHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccHHHHccccHHHHHHHHccccccHHHcccHHHHHHcHHHHccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
MNGAVLKLIDlgssagpstdmWSLGVLLYILLSgvspfldeseeeTRAHisvadysfppeqcghisvpARELIGQLLNthadkrptagQLLQVAWFAeiaipnntkvnCLAWHqnqgwiavggddglLKVLKldtgkestGQVAAANVNLAMNqslqghsgkVRAIIWNEQyekltssdetGLIIVWMLYkeknpqdklpplmlt
Flexible Loop (DISEMBL)
MNGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQyekltssdeTGLIIVWMLYkeknpqdklpplmlt
Low Complexity Region (SEG)
MNGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAvggddgllkvlkldtgkESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLMLT
Disordered region (IsUnstruct)
*****LKLIDL******STDMWSLGVLLYILLSGVSPFLD******RAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK**************
Disordered Region (DISOPRED)
*NGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI****************QGWIAVGGDDGL**************************************************SDETGLIIVWMLYK********PPLMLT
Disordered Region (DISEMBL)
MNGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLMLT
Disordered Region (DISPRO)
*NGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVN*******************NEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPL*LT
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLMLT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	205	2.2.26 [Sep-21-2011]
Q9P2L0	1181	WD repeat-containing prot	yes	N/A	0.458	0.079	0.610	2e-28
Q8BND3	1181	WD repeat-containing prot	yes	N/A	0.458	0.079	0.6	3e-28
A6N6J5	1170	WD repeat-containing prot	no	N/A	0.458	0.080	0.6	3e-28
O60229	2985	Kalirin OS=Homo sapiens G	no	N/A	0.380	0.026	0.5	1e-15
P97924	2959	Kalirin OS=Rattus norvegi	no	N/A	0.380	0.026	0.5	1e-15
A2CG49	2964	Kalirin OS=Mus musculus G	no	N/A	0.380	0.026	0.5	1e-15
Q1LUA6	3028	Triple functional domain	no	N/A	0.419	0.028	0.476	9e-15
O75962	3097	Triple functional domain	no	N/A	0.429	0.028	0.465	2e-14
Q0KL02	3102	Triple functional domain	no	N/A	0.429	0.028	0.465	4e-14
O43293	454	Death-associated protein	no	N/A	0.429	0.193	0.420	2e-12

>sp|Q9P2L0|WDR35_HUMAN WD repeat-containing protein 35 OS=Homo sapiens GN=WDR35 PE=1 SV=3

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 77/95 (81%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-QVAAANVNLAMNQSL 156
           +I+IPNN K+ C++W++ QG+IA GG+DGLLKVLKL+T  +    +  AA  NL+MNQ+L
Sbjct: 8   KISIPNNVKLQCVSWNKEQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSNLSMNQTL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SDE GLIIVWMLYK
Sbjct: 68  EGHSGSVQVVTWNEQYQKLTTSDENGLIIVWMLYK 102

May promote CASP3 activation and TNF-stimulated apoptosis. Required for ciliogenesis.
Homo sapiens (taxid: 9606)

>sp|Q8BND3|WDR35_MOUSE WD repeat-containing protein 35 OS=Mus musculus GN=Wdr35 PE=2 SV=3

 Score =  125 bits (313), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/95 (60%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSL 156
           +IA+PNN K+ C++W+++QG+IA GG+DGLLKVL+L+T   +S  +  AA  NL+MNQ+L
Sbjct: 8   KIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLRGLAAPSNLSMNQNL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 68  EGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 102

May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.

Mus musculus (taxid: 10090)

>sp|A6N6J5|WDR35_RAT WD repeat-containing protein 35 OS=Rattus norvegicus GN=Wdr35 PE=1 SV=1

 Score =  125 bits (313), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/95 (60%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSL 156
           +IA+PNN K+ C++W+++QG+IA GG+DGLLKVL+L+T   +S  +  AA  NL+MNQ+L
Sbjct: 8   KIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLRGLAAPSNLSMNQNL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 68  EGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 102

May promote CASP3 activation and TNF-stimulated apoptosis. Required for ciliogenesis.

Rattus norvegicus (taxid: 10116)

>sp|O60229|KALRN_HUMAN Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2

 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 51/78 (65%)

Query: 19   TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            TD+WS+GVL Y++LSGVSPFLDES+EET  ++   D+SFP E    +S  AR+ I  +L 
Sbjct: 2860 TDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCGVSNAARDFINVILQ 2919

Query: 79   THADKRPTAGQLLQVAWF 96
                +RPTA   LQ  W 
Sbjct: 2920 EDFRRRPTAATCLQHPWL 2937

Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3

 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 51/78 (65%)

Query: 19   TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            TD+WS+GVL Y++LSGVSPFLDES+EET  ++   D+SFP E    +S  AR+ I  +L 
Sbjct: 2834 TDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCGVSNAARDFINVILQ 2893

Query: 79   THADKRPTAGQLLQVAWF 96
                +RPTA   LQ  W 
Sbjct: 2894 EDFRRRPTAATCLQHPWL 2911

Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity. Isoforms 1 and 7 are necessary for neuronal development and axonal outgrowth. Isoform 6 is required for dendritic spine formation.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2CG49|KALRN_MOUSE Kalirin OS=Mus musculus GN=Kalrn PE=1 SV=1

 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 51/78 (65%)

Query: 19   TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            TD+WS+GVL Y++LSGVSPFLDES+EET  ++   D+SFP E    +S  AR+ I  +L 
Sbjct: 2833 TDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCGVSNAARDFINVILQ 2892

Query: 79   THADKRPTAGQLLQVAWF 96
                +RPTA   LQ  W 
Sbjct: 2893 EDFRRRPTAATCLQHPWL 2910

Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1LUA6|TRIO_DANRE Triple functional domain protein OS=Danio rerio GN=trio PE=3 SV=1

 Score = 80.1 bits (196), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 51/86 (59%)

Query: 11   LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
            LG     S+D+WSLGVL Y++LSG SPFLDES EET  +I   D+SFP +    +S  AR
Sbjct: 2895 LGDPVSLSSDLWSLGVLTYVMLSGASPFLDESVEETCLNICRLDFSFPDDYFQGVSQAAR 2954

Query: 71   ELIGQLLNTHADKRPTAGQLLQVAWF 96
            + +  LL     KRP A   LQ  W 
Sbjct: 2955 DFMCLLLRMEPSKRPPATSCLQEPWL 2980

Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O75962|TRIO_HUMAN Triple functional domain protein OS=Homo sapiens GN=TRIO PE=1 SV=2

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 54/88 (61%)

Query: 9    IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
            I LG+    ++D WS+GVL Y+LLSGVSPFLD+S EET  +I   D+SFP +    +S  
Sbjct: 2963 IILGNPVSLTSDTWSVGVLTYVLLSGVSPFLDDSVEETCLNICRLDFSFPDDYFKGVSQK 3022

Query: 69   ARELIGQLLNTHADKRPTAGQLLQVAWF 96
            A+E +  LL     KRP+A   LQ  W 
Sbjct: 3023 AKEFVCFLLQEDPAKRPSAALALQEQWL 3050

Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0KL02|TRIO_MOUSE Triple functional domain protein OS=Mus musculus GN=Trio PE=1 SV=3

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 53/88 (60%)

Query: 9    IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
            I LG+    + D WS+GVL Y+LLSGVSPFLD+S EET  +I   D+SFP +    +S  
Sbjct: 2966 IILGNPVSLTADTWSVGVLTYVLLSGVSPFLDDSVEETCLNICRLDFSFPEDYFQGVSQK 3025

Query: 69   ARELIGQLLNTHADKRPTAGQLLQVAWF 96
            A+E +  LL     KRP+A   LQ  W 
Sbjct: 3026 AKEFVCFLLQEDPAKRPSAALALQEQWL 3053

Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O43293|DAPK3_HUMAN Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 51/88 (57%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL E+++ET  +IS  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 254

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPN 103
           LL     +R T  Q L+ +W   I   N
Sbjct: 255 LLVKDPKRRMTIAQSLEHSWIKAIRRRN 282

Isoform 2 can phosphorylate myosin, PPP1R12A and MYL12B.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	205
242005643	1140	WD-repeat protein, putative [Pediculus h	0.458	0.082	0.670	1e-30
395508986	1242	PREDICTED: WD repeat-containing protein	0.497	0.082	0.582	6e-28
291225001	1176	PREDICTED: WD repeat domain 35-like [Sac	0.458	0.079	0.625	7e-28
395828621	1169	PREDICTED: WD repeat-containing protein	0.458	0.080	0.631	2e-27
156398925	1173	predicted protein [Nematostella vectensi	0.458	0.080	0.614	2e-27
426223182	1181	PREDICTED: WD repeat-containing protein	0.458	0.079	0.610	3e-27
426223180	1170	PREDICTED: WD repeat-containing protein	0.458	0.080	0.610	3e-27
334313579	1042	PREDICTED: WD repeat-containing protein	0.458	0.090	0.610	5e-27
328705678	1163	PREDICTED: WD repeat-containing protein	0.458	0.080	0.625	5e-27
281344226	1174	hypothetical protein PANDA_002987 [Ailur	0.458	0.080	0.610	6e-27

>gi|242005643|ref|XP_002423673.1| WD-repeat protein, putative [Pediculus humanus corporis] gi|212506842|gb|EEB10935.1| WD-repeat protein, putative [Pediculus humanus corporis]

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 82/94 (87%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ 157
           +IAIPNNTK+NCLAW++ QG+IAVGG DGLLK+LKLD+G ++  +  AA  NL+MNQ+L+
Sbjct: 8   KIAIPNNTKLNCLAWNKEQGYIAVGGSDGLLKILKLDSGNDNKMKGLAAPSNLSMNQTLE 67

Query: 158 GHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           GHSG+V+ I+WNE Y+KLT+SD+ GLIIVWMLYK
Sbjct: 68  GHSGEVQVIVWNEIYQKLTTSDQYGLIIVWMLYK 101

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|395508986|ref|XP_003758788.1| PREDICTED: WD repeat-containing protein 35 [Sarcophilus harrisii]

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 84/103 (81%), Gaps = 1/103 (0%)

Query: 90  LLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-GKESTGQVAAANV 148
           + ++A  ++IAIPNN K+ C++W+++QG+IA GG+DGLLKVLKL+T   +S  +  AA  
Sbjct: 72  VCRLAALSQIAIPNNVKLKCISWNKDQGFIACGGEDGLLKVLKLETQTDDSKLRGLAAPS 131

Query: 149 NLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           NL+MNQ+L+GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 132 NLSMNQTLEGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 174

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291225001|ref|XP_002732486.1| PREDICTED: WD repeat domain 35-like [Saccoglossus kowalevskii]

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 78/96 (81%), Gaps = 2/96 (2%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA--AANVNLAMNQS 155
           +IAIPNNTK+ C++W++ QG+IA GG+DGLLKVLKL+T +    +V   AA  NL+MNQS
Sbjct: 8   KIAIPNNTKLKCVSWNREQGYIACGGEDGLLKVLKLETQQSKDAKVRGLAAPSNLSMNQS 67

Query: 156 LQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           L+GHSG V+ + WNE Y+KLT+SD+ GLIIVWMLYK
Sbjct: 68  LEGHSGAVQVVTWNEHYQKLTTSDQYGLIIVWMLYK 103

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|395828621|ref|XP_003787468.1| PREDICTED: WD repeat-containing protein 35 [Otolemur garnettii]

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/95 (63%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-QVAAANVNLAMNQSL 156
           +IAIPNN K+ C++W+++QG+IA GG+DGLLKVLKL+T  + T  +  AA  NL+MNQ+L
Sbjct: 8   KIAIPNNVKLKCVSWNKDQGFIACGGEDGLLKVLKLETQTDDTKLRGLAAPSNLSMNQTL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLTSSD+ GLIIVWMLYK
Sbjct: 68  EGHSGCVQVVTWNEQYQKLTSSDQNGLIIVWMLYK 102

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156398925|ref|XP_001638438.1| predicted protein [Nematostella vectensis] gi|156225558|gb|EDO46375.1| predicted protein [Nematostella vectensis]

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 81/96 (84%), Gaps = 2/96 (2%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT--GKESTGQVAAANVNLAMNQS 155
           +IAIPNNT++ CLAW++ QG+IA GG++GLLKVLKL+T  GK+S  +  AA  NL+MNQ+
Sbjct: 8   KIAIPNNTRLKCLAWNREQGYIACGGEEGLLKVLKLETQQGKDSKLKGLAAPSNLSMNQT 67

Query: 156 LQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           L+GH+G V+ + WNEQ++KLT+SD+ GLIIVW+LYK
Sbjct: 68  LEGHTGAVQVVTWNEQFQKLTTSDQYGLIIVWILYK 103

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|426223182|ref|XP_004005756.1| PREDICTED: WD repeat-containing protein 35 isoform 2 [Ovis aries]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-QVAAANVNLAMNQSL 156
           ++A+PNN K+ C++W+++QG+IA GGDDGLLKVLKL+T  + T  +  AA  NL+MNQ+L
Sbjct: 8   KVAMPNNVKLKCVSWNKDQGFIACGGDDGLLKVLKLETQTDDTKLRGLAAPSNLSMNQAL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 68  EGHSGSVQIVTWNEQYQKLTTSDQNGLIIVWMLYK 102

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426223180|ref|XP_004005755.1| PREDICTED: WD repeat-containing protein 35 isoform 1 [Ovis aries]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-QVAAANVNLAMNQSL 156
           ++A+PNN K+ C++W+++QG+IA GGDDGLLKVLKL+T  + T  +  AA  NL+MNQ+L
Sbjct: 8   KVAMPNNVKLKCVSWNKDQGFIACGGDDGLLKVLKLETQTDDTKLRGLAAPSNLSMNQAL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 68  EGHSGSVQIVTWNEQYQKLTTSDQNGLIIVWMLYK 102

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334313579|ref|XP_001370354.2| PREDICTED: WD repeat-containing protein 35-like [Monodelphis domestica]

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 78/95 (82%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-QVAAANVNLAMNQSL 156
           +IAIPNN K+ C++W+++QG+IA GG+DGLLKVLKL+T  +    +  AA  NL+MNQ+L
Sbjct: 8   KIAIPNNVKLKCISWNKDQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSNLSMNQTL 67

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 68  EGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 102

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328705678|ref|XP_001948891.2| PREDICTED: WD repeat-containing protein 35-like [Acyrthosiphon pisum]

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 76/96 (79%), Gaps = 2/96 (2%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA--AANVNLAMNQS 155
           +IAIPNNTK+NCL W+ +Q  IAVGGDDGLLKVLK+D+G  + G+    A   NL++N++
Sbjct: 8   KIAIPNNTKINCLEWNSSQDCIAVGGDDGLLKVLKIDSGTPADGKPRGLAGQANLSINKT 67

Query: 156 LQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           L+GHSG V  I+WNE++ KLTSSDE GLIIVW LYK
Sbjct: 68  LEGHSGNVLTIVWNEKHNKLTSSDENGLIIVWTLYK 103

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281344226|gb|EFB19810.1| hypothetical protein PANDA_002987 [Ailuropoda melanoleuca]

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 78/95 (82%), Gaps = 1/95 (1%)

Query: 98  EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-QVAAANVNLAMNQSL 156
           +IAIPNN K+ C++W+++QG+IA GG+DGLLKVLKL+T  +    +  AA  NL+MNQ+L
Sbjct: 1   QIAIPNNVKLKCVSWNKDQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSNLSMNQTL 60

Query: 157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
           +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct: 61  EGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 95

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	205
RGD|1564116	1170	Wdr35 "WD repeat domain 35" [R	0.458	0.080	0.484	4.2e-19
MGI|MGI:1921932	1181	Wdr35 "WD repeat domain 35" [M	0.458	0.079	0.484	4.3e-19
UNIPROTKB|Q9P2L0	1181	WDR35 "WD repeat-containing pr	0.458	0.079	0.484	7e-19
ZFIN|ZDB-GENE-060810-148	1203	wdr35 "WD repeat domain 35" [D	0.458	0.078	0.484	1.2e-18
UNIPROTKB|F1SCU2	1186	WDR35 "Uncharacterized protein	0.448	0.077	0.462	1.7e-17
FB|FBgn0035264	1205	Oseg4 "Oseg4" [Drosophila mela	0.453	0.077	0.453	6e-17
UNIPROTKB|E1BWD7	1180	WDR35 "Uncharacterized protein	0.458	0.079	0.432	9.5e-17
UNIPROTKB|F1NPK0	2952	KALRN "Uncharacterized protein	0.380	0.026	0.525	1.2e-15
UNIPROTKB|C9JQ37	1289	KALRN "Kalirin" [Homo sapiens	0.370	0.058	0.525	2.4e-14
UNIPROTKB|F1PUI1	2201	KALRN "Uncharacterized protein	0.370	0.034	0.525	4.5e-14

RGD|1564116 Wdr35 "WD repeat domain 35" [Rattus norvegicus (taxid:10116)]

 Score = 242 (90.2 bits), Expect = 4.2e-19, P = 4.2e-19
 Identities = 46/95 (48%), Positives = 65/95 (68%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIA-XXXXXXXXXXXXXXXXXESTGQVAAANVNLAMNQSL 156
             +IA+PNN K+ C++W+++QG+IA                  +S  +  AA  NL+MNQ+L
Sbjct:     8 KIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLRGLAAPSNLSMNQNL 67

Query:   157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
             +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct:    68 EGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 102

GO:0005813 "centrosome" evidence=ISO;ISS

GO:0005932 "microtubule basal body" evidence=ISO;ISS

GO:0030991 "intraflagellar transport particle A" evidence=ISO;ISS

GO:0035085 "cilium axoneme" evidence=ISO;ISS

GO:0042384 "cilium assembly" evidence=ISO;ISS

MGI|MGI:1921932 Wdr35 "WD repeat domain 35" [Mus musculus (taxid:10090)]

 Score = 242 (90.2 bits), Expect = 4.3e-19, P = 4.3e-19
 Identities = 46/95 (48%), Positives = 65/95 (68%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIA-XXXXXXXXXXXXXXXXXESTGQVAAANVNLAMNQSL 156
             +IA+PNN K+ C++W+++QG+IA                  +S  +  AA  NL+MNQ+L
Sbjct:     8 KIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLRGLAAPSNLSMNQNL 67

Query:   157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
             +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct:    68 EGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 102

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005932 "microtubule basal body" evidence=IDA

GO:0030030 "cell projection organization" evidence=IEA

GO:0030991 "intraflagellar transport particle A" evidence=ISO

GO:0035085 "cilium axoneme" evidence=IDA

GO:0042384 "cilium assembly" evidence=ISO;IMP

GO:0042995 "cell projection" evidence=IEA

UNIPROTKB|Q9P2L0 WDR35 "WD repeat-containing protein 35" [Homo sapiens (taxid:9606)]

 Score = 240 (89.5 bits), Expect = 7.0e-19, P = 7.0e-19
 Identities = 46/95 (48%), Positives = 63/95 (66%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIAXXXXXXXXXXXXXXXXXESTG-QVAAANVNLAMNQSL 156
             +I+IPNN K+ C++W++ QG+IA                 +    +  AA  NL+MNQ+L
Sbjct:     8 KISIPNNVKLQCVSWNKEQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSNLSMNQTL 67

Query:   157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
             +GHSG V+ + WNEQY+KLT+SDE GLIIVWMLYK
Sbjct:    68 EGHSGSVQVVTWNEQYQKLTTSDENGLIIVWMLYK 102

GO:0030991 "intraflagellar transport particle A" evidence=IDA

GO:0042384 "cilium assembly" evidence=IMP

GO:0005932 "microtubule basal body" evidence=ISS

GO:0005813 "centrosome" evidence=ISS

GO:0035085 "cilium axoneme" evidence=ISS

ZFIN|ZDB-GENE-060810-148 wdr35 "WD repeat domain 35" [Danio rerio (taxid:7955)]

 Score = 238 (88.8 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 46/95 (48%), Positives = 64/95 (67%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIAXXXXXXXXXXXXXXXXXESTG-QVAAANVNLAMNQSL 156
             +IAIPNNT + C++W+++QG+IA                 +    +  AA  NL+MNQ+L
Sbjct:     8 KIAIPNNTVLKCVSWNKDQGFIACGGEDGLLKVLKLETYTDDAKLKGLAAPSNLSMNQTL 67

Query:   157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
             +GHSG V+ + WNEQY+KLT+SD+ GLIIVWMLYK
Sbjct:    68 EGHSGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYK 102

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1SCU2 WDR35 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 227 (85.0 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 43/93 (46%), Positives = 62/93 (66%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIAXXXXXXXXXXXXXXXXXESTG-QVAAANVNLAMNQSL 156
             +I+IPNN K+ C++W+++QG+IA                 +    +  AA  NL+MNQ+L
Sbjct:     8 KISIPNNVKLKCISWNKDQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSNLSMNQTL 67

Query:   157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWML 189
             +GHSG V+ + WNEQY+KLT+SD+ GLIIVWML
Sbjct:    68 EGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWML 100

GO:0042384 "cilium assembly" evidence=IEA

GO:0035085 "cilium axoneme" evidence=IEA

GO:0005932 "microtubule basal body" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

FB|FBgn0035264 Oseg4 "Oseg4" [Drosophila melanogaster (taxid:7227)]

 Score = 222 (83.2 bits), Expect = 6.0e-17, P = 6.0e-17
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIAXXXXXXXXXXXXXXXXX---ESTGQVAAANVNLAMNQ 154
             +IAIPNN K+NC+AW++ +G+IA                    +S G +AA + NL+MNQ
Sbjct:     8 KIAIPNNVKLNCIAWNKEEGYIAVAGTDGLLKVLKLDQATPNGQSKGGLAAVS-NLSMNQ 66

Query:   155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
             +L GH   VR + WN+  +KLTSSD  G+I+VWMLYK
Sbjct:    67 TLDGHKESVRVVTWNDAQQKLTSSDTDGVIMVWMLYK 103

GO:0003674 "molecular_function" evidence=ND

GO:0042384 "cilium assembly" evidence=ISM;IEP

GO:0035058 "nonmotile primary cilium assembly" evidence=ISS

GO:0031513 "nonmotile primary cilium" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|E1BWD7 WDR35 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 220 (82.5 bits), Expect = 9.5e-17, P = 9.5e-17
 Identities = 42/97 (43%), Positives = 63/97 (64%)

Query:    98 EIAIPNNTKVNCLAWHQNQGWIA---XXXXXXXXXXXXXXXXXESTGQVAAANVNLAMNQ 154
             +IAIP N ++ C++W++++G+IA                    E+  +  AA  NL+MNQ
Sbjct:     8 KIAIPGNVRLRCISWNKDEGFIACGGEDGLLKVLKLETQSVLDEAKIKGLAAPSNLSMNQ 67

Query:   155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK 191
             +L+GHSG V+ + WNEQY KLT+SD+ GLIIVW++YK
Sbjct:    68 TLEGHSGSVQVVTWNEQYHKLTTSDQNGLIIVWIIYK 104

GO:0005813 "centrosome" evidence=IEA

GO:0005932 "microtubule basal body" evidence=IEA

GO:0035085 "cilium axoneme" evidence=IEA

GO:0042384 "cilium assembly" evidence=IEA

UNIPROTKB|F1NPK0 KALRN "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 214 (80.4 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 41/78 (52%), Positives = 54/78 (69%)

Query:    18 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
             STD+WS+GVL Y++LSGVSPFLDES+EET  ++   D+SFPPE    +S  AR+ I  +L
Sbjct:  2826 STDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPPEYFSDVSHAARDFINVIL 2885

Query:    78 NTHADKRPTAGQLLQVAW 95
                + +RPTA   LQ  W
Sbjct:  2886 QEDSRRRPTAATCLQHPW 2903

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|C9JQ37 KALRN "Kalirin" [Homo sapiens (taxid:9606)]

 Score = 198 (74.8 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 41/78 (52%), Positives = 53/78 (67%)

Query:    19 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ-CGHISVPARELIGQLL 77
             TD+WS+GVL Y++LSGVSPFLDES+EET  ++   D+SFP E  CG +S  AR+ I  +L
Sbjct:  1164 TDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCG-VSNAARDFINVIL 1222

Query:    78 NTHADKRPTAGQLLQVAW 95
                  +RPTA   LQ  W
Sbjct:  1223 QEDFRRRPTAATCLQHPW 1240

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1PUI1 KALRN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 198 (74.8 bits), Expect = 4.5e-14, P = 4.5e-14
 Identities = 41/78 (52%), Positives = 53/78 (67%)

Query:    19 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ-CGHISVPARELIGQLL 77
             TD+WS+GVL Y++LSGVSPFLDES+EET  ++   D+SFP E  CG +S  AR+ I  +L
Sbjct:  2076 TDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCG-VSNAARDFINVIL 2134

Query:    78 NTHADKRPTAGQLLQVAW 95
                  +RPTA   LQ  W
Sbjct:  2135 QEDFRRRPTAATCLQHPW 2152

GO:0005524 "ATP binding" evidence=IEA

GO:0035023 "regulation of Rho protein signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BND3	WDR35_MOUSE	No assigned EC number	0.6	0.4585	0.0795	yes	N/A
Q9P2L0	WDR35_HUMAN	No assigned EC number	0.6105	0.4585	0.0795	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	205
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-18
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-15
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-12
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	8e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-08
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-07
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-07
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	8e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-06
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-06
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	7e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-05
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-05
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-05
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	5e-05
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	5e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	5e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	6e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-04
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	5e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	6e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	7e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.001
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.001
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.001
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	0.001
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.001
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.002
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.002
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.002
smart00320	40	smart00320, WD40, WD40 repeats	0.002
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	0.002
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	0.003
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	0.003
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.003
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.004
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.004
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.004
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 80.7 bits (200), Expect = 1e-18
 Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 28/120 (23%)

Query: 5   VLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVS 36
            +KL D G +                             G + D+WSLGV+LY LL+G  
Sbjct: 135 HVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKP 194

Query: 37  PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
           PF  + +               P     IS  A++LI +LL    +KR TA + LQ  +F
Sbjct: 195 PFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 70.4 bits (173), Expect = 9e-15
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG     + D WSLG +LY  L G+ PF  E+ EE   +I      +P  +   +S  A 
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWP--EDVEVSDEAI 231

Query: 71  ELIGQLLNTHADKRPTAG---QLLQVAWFAEI 99
           +LI +LL    +KR  A    ++    +F  I
Sbjct: 232 DLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 67.9 bits (167), Expect = 6e-14
 Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG   G + D WSLGVLLY +L+G  PF  E  +E    I      FP      +S  AR
Sbjct: 166 LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE----FLSPEAR 221

Query: 71  ELIGQLLNTHADKRPTAGQLLQV 93
           +LI  LL     KR  +G   ++
Sbjct: 222 DLISGLLQKDPTKRLGSGGAEEI 244

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 8   LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV---ADYSFPPEQCGH 64
           ++  G+  GP  D+WSLGV+LY LL+G  PF  E+  +    I         F   +   
Sbjct: 169 VLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSS 228

Query: 65  ISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
            S  A++LI + LN    KRPTA ++LQ  WF
Sbjct: 229 GSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
              AG S+D+W+LG ++Y +L+G  PF   +E  T   I   +YSFPP    +    A++
Sbjct: 196 EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP----NFPPDAKD 251

Query: 72  LIGQLLNTHADKRPTAG----QLLQVAWF 96
           LI +LL      R        +L    +F
Sbjct: 252 LIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G   G + D W+LG+LLY +L G +PF   + +ET ++I   + +FP      +S  AR+
Sbjct: 206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS--PPVSSSARD 263

Query: 72  LIGQLLNTHADKR 84
           LI +LL     KR
Sbjct: 264 LIRKLLVKDPSKR 276

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 55.5 bits (132), Expect = 3e-09
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 9/110 (8%)

Query: 6   LKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQ 61
           + L    + A  S+D+WSLG+ LY LL+G+ PF  E       +T   I           
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238

Query: 62  C-----GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
                   IS  A +L+ +LL      R ++   L     A + +  +  
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDL 288

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 53.7 bits (130), Expect = 8e-09
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           +D+WSLG +LY L +   PF  E+  E    I    Y   P      S   R L+  LL 
Sbjct: 184 SDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPS---QYSSELRNLVSSLLQ 240

Query: 79  THADKRPTAGQLLQ 92
              ++RP+  Q+LQ
Sbjct: 241 KDPEERPSIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 53.7 bits (130), Expect = 8e-09
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W+LG+L+Y +L+G  PF D++  +    I      FP       S  A++LI  
Sbjct: 176 GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLIRN 231

Query: 76  LLNTHADKR-----PTAGQLLQVAWFAEI 99
           LL     KR          +    WFA I
Sbjct: 232 LLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHIS----VADYSFPPEQCGHISVPARELIGQ 75
           D WSLGVL + LL+G SPF  + E+ +++ IS     +   FP      +S  AR+ I +
Sbjct: 190 DWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKT----MSAEARDFIQK 245

Query: 76  LLNTHADKR 84
           LL     KR
Sbjct: 246 LLEKDPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 52.6 bits (126), Expect = 2e-08
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS----VADYSFPPEQCGHISVPARE 71
           G + D WSLG+L++ LL+G SPF  E E  T++ +S      D  FP      I   A++
Sbjct: 185 GKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPS----FIGPEAQD 240

Query: 72  LIGQLLNTHADKRPTAG 88
           L+ +LL     KR  AG
Sbjct: 241 LLHKLLRKDPKKRLGAG 257

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I      GP+ D W+LGVLLY +L+G SPF  + E+E    I   +  +P      +S  
Sbjct: 167 ILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSKE 222

Query: 69  ARELIGQLLNTHADKR----PTAGQ-LLQVAWFAEI 99
           A+ ++   L  + +KR    PT  Q +    +F EI
Sbjct: 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS--FPPEQCGHISVP 68
            G+  G   D WSLGV+LY +L G  PF  ++ +ET   I     S  FPP+    +S  
Sbjct: 203 RGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDP--PVSPE 260

Query: 69  ARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
           A +LI +LL    D+  +  ++    +F  I
Sbjct: 261 AIDLICRLLCDPEDRLGSFEEIKSHPFFKGI 291

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
           S  G + D WSLG L+Y +L+G  PF  E+ ++T   I     + PP    +++  AR+L
Sbjct: 175 SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP----YLTPEARDL 230

Query: 73  IGQLLNTHADKRPTAG 88
           + +LL  +   R  AG
Sbjct: 231 LKKLLKRNPSSRLGAG 246

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 51.0 bits (122), Expect = 9e-08
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG   GP+ D W+LGV L+  L+G+ PF DE+ ++   +I   D  +P  +   +SV A+
Sbjct: 553 LGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGE-EKLSVNAQ 611

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
             I  LL     KR    +L Q   F  +
Sbjct: 612 NAIEILLTMDPTKRAGLKELKQHPLFHGV 640

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 49.2 bits (117), Expect = 3e-07
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           DMWSLGV+LY LL+   PF   S+ E    +    Y   P  C  +S   + L+  LL+ 
Sbjct: 253 DMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--PFPCP-VSSGMKALLDPLLSK 309

Query: 80  HADKRPTAGQLLQVAWFAEIA 100
           +   RPT  QLL   +   +A
Sbjct: 310 NPALRPTTQQLLHTEFLKYVA 330

Length = 478

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 14/81 (17%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           VN +A+  +   +     DG +K+  L TGK                 +L+GH   V ++
Sbjct: 180 VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCL--------------GTLRGHENGVNSV 225

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            ++     L S  E G I VW
Sbjct: 226 AFSPDGYLLASGSEDGTIRVW 246

Length = 289

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD--YSFPPEQCGHISVPARELI 73
           GP  D WSLGV +Y +L G +PF  ES  ET   I      + FPP+    +S  A++LI
Sbjct: 186 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTD-VSEEAKDLI 244

Query: 74  GQLL 77
            +L+
Sbjct: 245 RRLI 248

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 47.7 bits (114), Expect = 8e-07
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 14/81 (17%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           VN +A+  +   +A G +DG ++V  L TG+                Q+L GH+  V ++
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWDLRTGECV--------------QTLSGHTNSVTSL 267

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            W+   ++L S    G I +W
Sbjct: 268 AWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 17  PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 76
             +D+WSLG L+Y L +   PF   ++ +  + I    +   P +    S    E+I  +
Sbjct: 189 EKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYR---YSSELNEVIKSM 245

Query: 77  LNTHADKRPTAGQLLQ 92
           LN   DKRP+  +LLQ
Sbjct: 246 LNVDPDKRPSTEELLQ 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 48.0 bits (114), Expect = 8e-07
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I LG     S D WS GVLLY +L G SPF    EEE    I + +  +P      ++  
Sbjct: 167 ILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR----WLTRE 222

Query: 69  ARELIGQLLNTHADKR-PTAGQLLQVAWFAEI 99
           A++++ +L     ++R    G + Q  +F EI
Sbjct: 223 AKDILVKLFVREPERRLGVKGDIRQHPFFREI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 14/82 (17%)

Query: 106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
            V C+A+  +   +A G  DG +KV  L+TG+                 +L+GH+G VR 
Sbjct: 11  GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLR--------------TLKGHTGPVRD 56

Query: 166 IIWNEQYEKLTSSDETGLIIVW 187
           +  +     L S      I +W
Sbjct: 57  VAASADGTYLASGSSDKTIRLW 78

Length = 289

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 25/76 (32%), Positives = 38/76 (50%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           +D+WSLG LLY + +  SPF  +          +    +PP    H S   R+L+ + +N
Sbjct: 187 SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCIN 246

Query: 79  THADKRPTAGQLLQVA 94
              +KRP    +LQVA
Sbjct: 247 PDPEKRPDISYVLQVA 262

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G S D W+ GVLLY +L+G  PF  E E+E    I   + S+P      +S  A  +   
Sbjct: 179 GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKG 234

Query: 76  LLNTHADKR 84
           LL  H  KR
Sbjct: 235 LLTKHPAKR 243

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W++GVLLY  ++G  PF D++       I      FP          AR+L+  
Sbjct: 193 GKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----NWFDGRARDLVKG 248

Query: 76  LLNTHADKR 84
           LL T   KR
Sbjct: 249 LLQTDHTKR 257

Length = 329

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 39/71 (54%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GVL+Y LL+G SPF  + E+ ++A IS       P     +S  A+++I +LL
Sbjct: 188 AVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLL 247

Query: 78  NTHADKRPTAG 88
                KR   G
Sbjct: 248 MKDPKKRLGCG 258

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D WSLGV +Y +L G +PF  ES  ET   I   +  F  P     +S  A++LI 
Sbjct: 186 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQ 245

Query: 75  QLL 77
           +L+
Sbjct: 246 RLI 248

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 24/76 (31%), Positives = 36/76 (47%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           +D+WSLG LLY + +  SPF  +          +    +PP    H S   REL+   + 
Sbjct: 187 SDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIY 246

Query: 79  THADKRPTAGQLLQVA 94
              D+RP  G + Q+A
Sbjct: 247 PDPDQRPDIGYVHQIA 262

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 45.3 bits (108), Expect = 6e-06
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 73
           + D+WSLG+ L     G  PFL   +    E  +A       S P E+    S   R+ I
Sbjct: 180 AADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEF---SPEFRDFI 236

Query: 74  GQLLNTHADKRPTAGQLLQVAW 95
              L     KRP+A +LLQ  +
Sbjct: 237 SACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADY-SFPPEQCGHISVPARELI 73
               D WSLGV++Y +L G  PF  ++ +ET R  I+  +   FP E    +S  A++LI
Sbjct: 217 NKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEV--PLSPEAKDLI 274

Query: 74  GQLLNTHADKR---PTAGQLLQVAWFAEI 99
            +L    A++R       ++    +F  +
Sbjct: 275 KRLC-CEAERRLGNNGVNEIKSHPFFKGV 302

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I  G     S D WS GVLLY +L G SPF  E E+E    I      FP      IS  
Sbjct: 167 ILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR----WISKE 222

Query: 69  ARELIGQLLNTHADKR-PTAGQLLQVAWFAEI 99
           A++ + +L      KR    G + Q  +F  I
Sbjct: 223 AKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
             +S   + D W LGVL+Y +L G SPF  + EEE    I   +  +P      +S  A 
Sbjct: 174 TETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAI 229

Query: 71  ELIGQLLNTHADKRPTAGQ 89
            ++ +LL  + ++R  +G+
Sbjct: 230 SIMRRLLRRNPERRLGSGE 248

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D WSLGV +Y +L G +PF  ES  ET   I      F  P Q   +S  A++LI 
Sbjct: 186 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIR 245

Query: 75  QLL 77
           +L+
Sbjct: 246 RLI 248

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V+ +A+  +   ++    D  +KV  ++TGK                 +L+GH+  V ++
Sbjct: 96  VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL--------------TTLRGHTDWVNSV 141

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            ++     + SS + G I +W
Sbjct: 142 AFSPDGTFVASSSQDGTIKLW 162

Length = 289

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS-FPPEQCGHISVPARELIGQLLN 78
           DM+SLGVLLY LL+   PF  E+ EE         Y   PP     IS   +E++  LL+
Sbjct: 227 DMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPS----ISPEMQEIVTALLS 282

Query: 79  THADKRPTAGQLL 91
           +   +RP++ +LL
Sbjct: 283 SDPKRRPSSSKLL 295

Length = 496

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 7   KLIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 65
           ++ID G    G   D+WSLG  +  + +G  PF+ E  E   A   V  +   PE    +
Sbjct: 179 EVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFI-ELGEPQAAMFKVGMFKIHPEIPESL 237

Query: 66  SVPARELIGQLLNTHADKRPTAGQLLQ 92
           S  A+  I +      DKR +A  LLQ
Sbjct: 238 SAEAKNFILRCFEPDPDKRASAHDLLQ 264

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
           +S     D+WSLG L+  +L+G  PF D ++ +    I        P    +IS  A + 
Sbjct: 187 TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPS---NISSEAIDF 243

Query: 73  IGQLLNTHADKRPTAGQLL 91
           + +      +KRPTA +LL
Sbjct: 244 LEKTFEIDHNKRPTAAELL 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D W++G++LY  L G  PF  ++ EE    + ++D    PE    +   A++LI +
Sbjct: 194 GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV-ISDDIEWPEGDEALPADAQDLISR 252

Query: 76  LLNTHADKRPTAGQLLQV 93
           LL  +  +R   G   +V
Sbjct: 253 LLRQNPLERLGTGGAFEV 270

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG     + D W+LGVLLY +L+G+ PF DE+  E    I      FP          A+
Sbjct: 166 LGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAK 221

Query: 71  ELIGQLLNTHADKR 84
           +L+  LL+    +R
Sbjct: 222 DLLIGLLSRDPTRR 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 15/83 (18%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR------E 71
            +D+WSLG LLY + +   PF   S ++ R  +    Y  PP       +P         
Sbjct: 181 KSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY--PP-------IPPIYSQDLQN 231

Query: 72  LIGQLLNTHADKRPTAGQLLQVA 94
            I  +L      RP   ++L   
Sbjct: 232 FIRSMLQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 10  DLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-SVADY-SFPPEQCGHISV 67
           D   + G   D WSLGV+ Y ++ G SPF + +  +T  +I +   +  FP +    +S 
Sbjct: 181 DGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDP--KVSS 238

Query: 68  PARELIGQLLNTHADKR 84
              +LI  LL     +R
Sbjct: 239 DFLDLIQSLL-CGQKER 254

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 20  DMWSLGVLLYILLSGVSPF---LDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 76
           D WSLGV  Y  L G  P+        ++ RA    AD  +P       S  A + I +L
Sbjct: 181 DWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATW----STEAIDAINKL 236

Query: 77  LNTHADKR 84
           L     KR
Sbjct: 237 LERDPQKR 244

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS--FPPEQCGHISVPARELIGQ 75
             D WS+GV+LY +L G  PFL ++  ET+  +   + +   P      +S  A +LI +
Sbjct: 224 LCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPS--QAKLSREASDLILR 281

Query: 76  LLNTHADKRPTAGQLLQV---AWFAEIAIPNNTK 106
           L    A+ R       ++    +F  I   +  +
Sbjct: 282 LC-CGAEDRLGKNGADEIKAHPFFKGIDFASLIR 314

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G S D W+ GVLLY +L+G  PF  E E+E    I   + S+P      +S  A  +   
Sbjct: 179 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKG 234

Query: 76  LLNTHADKRPTAGQ 89
           L+  H  KR   G 
Sbjct: 235 LMTKHPSKRLGCGP 248

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 16/30 (53%), Positives = 23/30 (76%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEE 45
           GPS D W++GVLLY +L G +PF  E+E++
Sbjct: 174 GPSVDWWAMGVLLYEMLCGHAPFEAENEDD 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 14/81 (17%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           VN +A+  +  ++A    DG +K+  L TGK                 +L GH+G+V ++
Sbjct: 138 VNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC--------------VATLTGHTGEVNSV 183

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            ++   EKL SS   G I +W
Sbjct: 184 AFSPDGEKLLSSSSDGTIKLW 204

Length = 289

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.8 bits (100), Expect = 5e-05
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L+   +KR +A +LLQ   F +IA P
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQ-HQFLKIAKP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS--FPPEQCGHIS 66
           I L    G   D WSLG +++  L G  PF  E+  ET   I     +  FP +   H+S
Sbjct: 219 IFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDI--HLS 276

Query: 67  VPARELIGQLLNTHADKR 84
           V A +LI +L+ T+A+ R
Sbjct: 277 VEAEDLIRRLI-TNAENR 293

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 17  PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD----YSFPPEQCGHISVPAREL 72
            S D W++GVL Y LL+G  PF ++ +EE    + +               ++S  A + 
Sbjct: 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEE----LDLESLLKRQQKKLPFIKNVSKNANDF 240

Query: 73  IGQLLNTHADKR 84
           +  +L  + + R
Sbjct: 241 VQSMLKYNINYR 252

Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G S D W+ GVLLY +L+G +PF  E E+E    I   + ++P      +S  A  +   
Sbjct: 179 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKG 234

Query: 76  LLNTHADKRPTAG 88
           L+  H  KR   G
Sbjct: 235 LMTKHPGKRLGCG 247

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (100), Expect = 6e-05
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D WSLGVL++ +  G SPF  E  ++   +I+     FP      +S   R+ +  
Sbjct: 175 TKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKG 231

Query: 76  LLNTHADKR----PTAGQLLQVAWFAEI 99
           LLN +   R      A +L +  +FA+I
Sbjct: 232 LLNRNPQHRLGAHRDAVELKEHPFFADI 259

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 42.3 bits (99), Expect = 6e-05
 Identities = 23/76 (30%), Positives = 35/76 (46%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           +D+WSLG LLY + +  SPF  +          +    +PP    H S   R+L+   +N
Sbjct: 187 SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCIN 246

Query: 79  THADKRPTAGQLLQVA 94
              +KRP    +  VA
Sbjct: 247 PDPEKRPDITYVYDVA 262

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 25/106 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPF--LDESEEETRAH----------------ISVADYSF 57
           GP  D+W++G + + +LS    F   +E ++  + H                    +Y+F
Sbjct: 177 GPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236

Query: 58  PPEQ-------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
           P ++         + S    +L+ +LL    D+R TA Q L+  +F
Sbjct: 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRALYLIATNGTPELQNPER---LSAVFRD 247

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L    D+R +A +LLQ   F ++A P
Sbjct: 248 FLNRCLEMDVDRRGSAKELLQHP-FLKLAKP 277

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS--FPPEQCGHISVPARELI 73
           G   D WS+GV LY +L G +PF  +S   T + I     S  FP +    IS  A++LI
Sbjct: 225 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDI--EISKQAKDLI 282

Query: 74  GQLLNTHADK 83
              L     +
Sbjct: 283 CAFLTDREVR 292

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           +D+W+LG +LY L S    F  E+       + +   +F P      S   R+LI  +LN
Sbjct: 182 SDIWALGCVLYELASLKRAF--EAANLPALVLKIMSGTFAPIS-DRYSPDLRQLILSMLN 238

Query: 79  THADKRPTAGQLL 91
               KRP   Q++
Sbjct: 239 LDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 13/89 (14%)

Query: 99  IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG 158
             +  ++     ++  +   +A G  DG +++  L +                  ++L G
Sbjct: 236 STLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLL-------------RTLSG 282

Query: 159 HSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
           HS  V ++ ++   + L S    G + +W
Sbjct: 283 HSSSVLSVAFSPDGKLLASGSSDGTVRLW 311

Length = 466

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 34/74 (45%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG      +D WSLG +++  L G  PF  E+ +    +I     ++P E     S  A 
Sbjct: 166 LGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAV 225

Query: 71  ELIGQLLNTHADKR 84
           +LI +LL     KR
Sbjct: 226 DLINRLLCMDPAKR 239

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             + D W+LG+L+Y +L G  PF D++       I      FP     H+ + A++LI +
Sbjct: 176 NKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIKK 231

Query: 76  LL 77
           LL
Sbjct: 232 LL 233

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 17/43 (39%), Positives = 27/43 (62%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 58
           GPS D W+LGVL+Y +++G  PF  ++E++    I   D  +P
Sbjct: 174 GPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP 216

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHIS--VADYSFPPEQCGHISVPARELI 73
           D WSLGV++Y +L G  PF  E+ +ET   +        FPPE    IS  A++LI
Sbjct: 218 DWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEV--PISEKAKDLI 271

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W LGV++Y ++ G  PF ++  E+    I + +  FP      +S  A+ L+  
Sbjct: 174 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLSG 229

Query: 76  LLNTHADKRPTAG-----QLLQVAWFAEI 99
           LL     +R   G     +++Q  +FA I
Sbjct: 230 LLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSPIFRD 247

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L    +KR +A +LLQ   F ++A P
Sbjct: 248 FLNRCLEMDVEKRGSAKELLQHP-FLKLAKP 277

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGH-ISVPARELIG 74
               D+WSLG+    L  G  P+ +      +A   +A    P  +     S   ++ + 
Sbjct: 175 DYKADIWSLGITAIELAEGKPPYSEL--PPMKALFKIATNGPPGLRNPEKWSDEFKDFLK 232

Query: 75  QLLNTHADKRPTAGQLLQ 92
           + L  + +KRPTA QLL+
Sbjct: 233 KCLQKNPEKRPTAEQLLK 250

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W LGV++Y ++ G  PF ++  E+    I + D  FP      +S  A+ L+  
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT----LSADAKSLLSG 228

Query: 76  LLNTHADKRPTAG 88
           LL    +KR   G
Sbjct: 229 LLIKDPNKRLGGG 241

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 18  STDMWSLGVLLYILLSGVSPF--LDESEEETRAHI--SVADYSFPPEQCGHISVPARELI 73
           S D WSLG+LLY LL+G  PF   DE   E    I        FP     +I   A++LI
Sbjct: 172 SVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN----YIDKAAKDLI 227

Query: 74  GQLLN 78
            QLL 
Sbjct: 228 KQLLR 232

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHIS--VADYSFPPEQCGHISVPARELI 73
           D WSLGV++Y +L G  PF  E+ +ET   +        FPPE    IS  A++LI
Sbjct: 218 DWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEV--PISEKAKDLI 271

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 39.5 bits (92), Expect = 5e-04
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 247

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L    +KR +A +LLQ   F +IA P
Sbjct: 248 FLNRCLEMDVEKRGSAKELLQHP-FLKIAKP 277

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 26/107 (24%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY---S 56
               D+WS+G +   LLS    F  +SE +    I                S+A     S
Sbjct: 177 STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS 236

Query: 57  FP-------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
           FP       P+   + S  A +L+ Q+L+    KR TA Q L   +F
Sbjct: 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 19  TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           +D+WS G+LL+   S G +P+   S ++TR  I  + Y  P  Q          L+ Q  
Sbjct: 176 SDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-SGYRMPAPQ--LCPEEIYRLMLQCW 232

Query: 78  NTHADKRPTAGQLLQV 93
               + RP+  ++   
Sbjct: 233 AYDPENRPSFSEIYNE 248

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-SVADYSFPPEQCGHISVPA 69
            G   G   D+WS+G  +  +L+   P+   +E E  A I  +A     P+   H+S  A
Sbjct: 180 SGEGYGRKADVWSVGCTVVEMLTEKPPW---AEFEAMAAIFKIATQPTNPQLPSHVSPDA 236

Query: 70  RELIGQLLNTHADKRPTAGQLL 91
           R  + +    +A KRP+A +LL
Sbjct: 237 RNFLRRTFVENAKKRPSAEELL 258

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.8 bits (83), Expect = 7e-04
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKV 130
           V  +A+  +   +A G DDG ++V
Sbjct: 14  VTSVAFSPDGNLLASGSDDGTVRV 37

Length = 39

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP-ARELIG 74
           GP  D+WSLG++   +  G  P+L E     RA   +     PP +      P  ++ + 
Sbjct: 194 GPKVDIWSLGIMCIEMAEGEPPYLREPPL--RALFLITTKGIPPLKNPEKWSPEFKDFLN 251

Query: 75  QLLNTHADKRPTAGQLLQ 92
           + L    +KRP+A +LLQ
Sbjct: 252 KCLVKDPEKRPSAEELLQ 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 16  GPST--DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELI 73
           G ST  D+WSLG  +  LL+G  P+ D +       I   D+   PE    IS   ++ +
Sbjct: 175 GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPE---GISPELKDFL 231

Query: 74  GQLLNTHADKRPTAGQLLQVAWF 96
            Q      + RPTA QLL+  W 
Sbjct: 232 MQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D WS GVLLY +L G SPF  + E+E    I V    +P      I+  +++++ +L 
Sbjct: 176 SVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR----WITKESKDILEKLF 231

Query: 78  NTHADKR 84
                +R
Sbjct: 232 ERDPTRR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 38.3 bits (90), Expect = 0.001
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 11/90 (12%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA----HISVADYSFP-PEQCGHIS 66
           G   G + D+WSLG  +  + +G  P+   SE          I  +      PE   H+S
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATGKPPW---SELGNPMAALYKIGSSGEPPEIPE---HLS 230

Query: 67  VPARELIGQLLNTHADKRPTAGQLLQVAWF 96
             A++ + + L     KRPTA +LLQ  + 
Sbjct: 231 EEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS----FPPEQCGHISVPARELIGQ 75
           D+WSLG ++  + +G  P+ DE  E   A   + +       PP+   ++S  A + +  
Sbjct: 194 DIWSLGCVVLEMFAGRRPWSDE--EAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNA 251

Query: 76  LLNTHADKRPTAGQLLQ 92
               + D RPTA +LLQ
Sbjct: 252 CFTINPDNRPTARELLQ 268

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 38.3 bits (89), Expect = 0.001
 Identities = 23/78 (29%), Positives = 38/78 (48%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
            +D+WSLG+ +  +  G  P+  E+     A +S      PP      S  A++ + + L
Sbjct: 187 QSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCL 246

Query: 78  NTHADKRPTAGQLLQVAW 95
           N   ++RPT  QLL+  W
Sbjct: 247 NKIPNRRPTYAQLLEHPW 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D WS GVL++ +L+G  PF  +  +ET   I  A    P      +S  A+ L+  L 
Sbjct: 178 SADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRALF 233

Query: 78  NTHADKRPTAG 88
             +   R  AG
Sbjct: 234 KRNPANRLGAG 244

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 14/81 (17%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V  +A   +  ++A G  D  +++  L+TG+                ++L GH+  V ++
Sbjct: 54  VRDVAASADGTYLASGSSDKTIRLWDLETGECV--------------RTLTGHTSYVSSV 99

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            ++     L+SS     I VW
Sbjct: 100 AFSPDGRILSSSSRDKTIKVW 120

Length = 289

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D W LG +LY +L G+ PF      E   +I        P    +ISV AR L+  LL
Sbjct: 176 TVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP----NISVSARHLLEGLL 231

Query: 78  NTHADKRPTAG 88
                KR  A 
Sbjct: 232 QKDRTKRLGAK 242

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           +D+W+LGV+LY   +G  PF  ++  +    + +    FPP    + S    +LI Q L 
Sbjct: 182 SDVWALGVVLYECCTGKHPF--DANNQGALILKIIRGVFPPVSQMY-SQQLAQLIDQCLT 238

Query: 79  THADKRPTAGQLLQ 92
               +RP   QLL+
Sbjct: 239 KDYRQRPDTFQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.6 bits (80), Expect = 0.002
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKV 130
           V  +A+  +  ++A G DDG +K+
Sbjct: 15  VTSVAFSPDGKYLASGSDDGTIKL 38

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF--PPEQCGHISVPARELIGQLL 77
           D WS+GV+L+ +L G  PFL  +  ET+  +   + +   PP+    +S  A +LI +L 
Sbjct: 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQV--KLSPEAVDLITKLC 287

Query: 78  NTHADK--RPTAGQLLQVAWFAEIAIPNNTK 106
            +  ++  R  A  +    +F+E+   ++ +
Sbjct: 288 CSAEERLGRNGADDIKAHPFFSEVDFSSDIR 318

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 37.8 bits (86), Expect = 0.003
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 13/86 (15%)

Query: 103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK 162
           +++ V  +A+  +   +A G  DG +++  L+TGK               + +L+GH G 
Sbjct: 283 HSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLL------------SSLTLKGHEGP 330

Query: 163 VRAIIWNEQYEKLTSSDET-GLIIVW 187
           V ++ ++     L S     G I +W
Sbjct: 331 VSSLSFSPDGSLLVSGGSDDGTIRLW 356

Length = 466

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 37.5 bits (88), Expect = 0.003
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 19  TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQ 75
           +D+WS GVLL+ + + G  P+   S  E   ++        P  C     P    +L+ Q
Sbjct: 185 SDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNC-----PPELYKLMLQ 239

Query: 76  LLNTHADKRPTAGQLLQ 92
                 + RPT  +L++
Sbjct: 240 CWAEDPEDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W LGV++Y ++ G  PF ++  E+    I + +  FP      +S  A+ L+  
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLAG 228

Query: 76  LLNTHADKRPTAGQ 89
           LL     +R   G 
Sbjct: 229 LLKKDPKQRLGGGP 242

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D+WSLG  +  + +G  P+     E   A   +      P    H+S  A++ I +
Sbjct: 180 GLAADIWSLGCTVLEMATGKPPWSQL--EGVAAVFKIGRSKELPPIPDHLSDEAKDFILK 237

Query: 76  LLNTHADKRPTAGQLLQ 92
            L      RPTA +LL+
Sbjct: 238 CLQRDPSLRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W LGV++Y ++ G  PF ++  E     I + +  FP      +S  A+ L+  
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 228

Query: 76  LLNTHADKRPTAG 88
           LL     +R   G
Sbjct: 229 LLKKDPKQRLGGG 241

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 20/60 (33%), Positives = 27/60 (45%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D W+LG LLY +++G SPF    ++  R  +         E     S  AR L   LL
Sbjct: 181 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLL 240

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 19/67 (28%), Positives = 30/67 (44%)

Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D ++LG  LY +++G SPF    E+  +  +         E     S  A++L   LL
Sbjct: 174 SVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALL 233

Query: 78  NTHADKR 84
               +KR
Sbjct: 234 QKDPEKR 240

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	205
KOG0575|consensus	592		99.91
KOG0033|consensus	355		99.9
KOG0615|consensus	475		99.89
KOG0592|consensus	604		99.89
KOG0588|consensus	786		99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
KOG0605|consensus	550		99.88
KOG0599|consensus	411		99.88
KOG0694|consensus	694		99.87
KOG0616|consensus	355		99.87
KOG0581|consensus	364		99.87
KOG0598|consensus	357		99.86
KOG0604|consensus	400		99.85
KOG0660|consensus	359		99.85
KOG0593|consensus	396		99.83
KOG0032|consensus	382		99.82
KOG0578|consensus	550		99.82
KOG0663|consensus	419		99.82
KOG0597|consensus	808		99.82
KOG0983|consensus	391		99.82
KOG0696|consensus	683		99.81
KOG4717|consensus	864		99.81
KOG0596|consensus	677		99.81
KOG0659|consensus	318		99.81
KOG0583|consensus	370		99.8
KOG0585|consensus	576		99.8
KOG0600|consensus	560		99.8
KOG0690|consensus	516		99.79
KOG0603|consensus	612		99.79
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.79
KOG0580|consensus	281		99.79
KOG0658|consensus	364		99.79
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.78
KOG0591|consensus	375		99.78
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.78
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.78
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.77
KOG0198|consensus	313		99.77
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.77
PTZ00036	440	glycogen synthase kinase; Provisional	99.77
PTZ00284	467	protein kinase; Provisional	99.77
KOG0201|consensus	467		99.77
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.77
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.77
KOG0661|consensus	538		99.76
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.76
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.76
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.76
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.76
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.76
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.76
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.76
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.76
KOG0197|consensus	468		99.76
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.76
KOG0610|consensus	459		99.75
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.75
KOG0607|consensus	463		99.75
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.75
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.75
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.75
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.74
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.74
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.74
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.74
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.74
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.73
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.73
KOG0594|consensus	323		99.73
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.73
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.73
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.73
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.73
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.73
KOG0612|consensus	1317		99.72
KOG0582|consensus	516		99.72
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.72
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.72
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.72
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.72
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.72
PHA02988	283	hypothetical protein; Provisional	99.71
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.71
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.71
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.71
PTZ00283	496	serine/threonine protein kinase; Provisional	99.71
KOG0667|consensus	586		99.71
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.71
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.71
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.71
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.71
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.71
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.71
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.71
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.71
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.71
PHA03212	391	serine/threonine kinase US3; Provisional	99.7
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.7
KOG4279|consensus	1226		99.7
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.7
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.7
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.7
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.7
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.7
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.7
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.7
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.7
KOG0272|consensus	459		99.69
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.69
KOG0986|consensus	591		99.69
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.69
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.69
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.69
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.69
PTZ00267	478	NIMA-related protein kinase; Provisional	99.69
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.69
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.69
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.69
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.69
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.68
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.68
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.68
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.68
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.68
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.68
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.68
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.68
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.68
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.68
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.68
KOG0271|consensus	480		99.68
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.68
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.68
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.68
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.68
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.68
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.67
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.67
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.67
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.67
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.67
KOG0579|consensus	1187		99.67
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.67
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.67
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.67
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.67
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.67
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.67
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.67
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.67
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.67
KOG0671|consensus	415		99.67
KOG0589|consensus	426		99.67
PHA03207	392	serine/threonine kinase US3; Provisional	99.66
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.66
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.66
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.66
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.66
KOG1026|consensus	774		99.66
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.66
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.66
KOG0669|consensus	376		99.66
KOG0263|consensus	707		99.66
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.66
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.66
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.66
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.66
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.66
KOG0662|consensus	292		99.65
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.65
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.65
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.65
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.65
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.65
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.65
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.65
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.65
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.65
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.65
KOG0611|consensus	668		99.65
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.65
KOG0595|consensus	429		99.65
PLN00009	294	cyclin-dependent kinase A; Provisional	99.65
KOG0271|consensus	480		99.65
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.65
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.65
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.64
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.64
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.64
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.64
KOG1989|consensus	738		99.64
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.64
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.64
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.64
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.64
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.64
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.64
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.64
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.64
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.64
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.63
KOG0614|consensus	732		99.63
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.63
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.63
KOG0577|consensus	948		99.63
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.63
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.63
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.63
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.63
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.63
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.62
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.62
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.62
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.62
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.62
PHA03209	357	serine/threonine kinase US3; Provisional	99.62
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.62
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.62
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.62
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.62
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.62
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.62
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.62
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.62
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.62
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.62
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.62
PHA03211	461	serine/threonine kinase US3; Provisional	99.62
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.61
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.61
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.61
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.61
KOG0666|consensus	438		99.61
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.61
KOG0670|consensus	752		99.61
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.61
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.61
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.61
KOG2345|consensus	302		99.61
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.61
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.61
KOG4721|consensus	904		99.61
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.61
KOG1006|consensus	361		99.61
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.61
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.61
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.61
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.6
KOG0574|consensus	502		99.6
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.6
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.6
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.6
KOG0608|consensus	1034		99.6
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.6
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.6
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.6
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.6
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.59
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.59
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.59
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.59
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.59
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.59
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.59
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.59
KOG0193|consensus	678		99.59
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.59
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.59
KOG0192|consensus	362		99.59
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.58
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.58
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.58
PHA03210	501	serine/threonine kinase US3; Provisional	99.58
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.58
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.58
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.58
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.58
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.58
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.57
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.57
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.57
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.57
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.57
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.57
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.57
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.57
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.57
KOG1095|consensus	1025		99.57
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.57
PHA02882	294	putative serine/threonine kinase; Provisional	99.57
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.56
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.56
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.56
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.56
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.56
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.56
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.56
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.56
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.55
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.55
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.55
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.55
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.55
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.55
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.55
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.55
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.55
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.55
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.54
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.54
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.54
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.54
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.54
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.54
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.54
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.54
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.54
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.54
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.54
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.54
KOG0695|consensus	593		99.53
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.53
KOG4236|consensus	888		99.53
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.53
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.53
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.53
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.53
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.53
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.53
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.53
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.53
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.53
KOG4645|consensus	1509		99.53
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.53
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.52
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.52
KOG0665|consensus	369		99.52
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.52
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.52
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.52
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.52
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.52
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.52
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.52
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.52
KOG0668|consensus	338		99.52
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.51
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.51
KOG0263|consensus	707		99.51
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.51
KOG0586|consensus	596		99.51
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.5
KOG1151|consensus	775		99.5
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.5
KOG0266|consensus	456		99.5
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.5
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.49
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.49
KOG0266|consensus	456		99.49
KOG0584|consensus	632		99.49
KOG1273|consensus	405		99.48
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.48
KOG0199|consensus	1039		99.48
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.48
KOG0645|consensus	312		99.48
KOG0315|consensus	311		99.48
KOG4278|consensus	1157		99.48
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.47
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.47
KOG0279|consensus	315		99.47
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.47
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.47
KOG0200|consensus	609		99.47
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.47
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.46
KOG0289|consensus	506		99.46
KOG0272|consensus	459		99.46
KOG1290|consensus	590		99.46
KOG4257|consensus	974		99.46
KOG0279|consensus	315		99.45
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.45
KOG1035|consensus	1351		99.45
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.45
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.44
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.44
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.44
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.43
KOG0291|consensus	893		99.43
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.43
KOG0194|consensus	474		99.42
KOG0318|consensus	603		99.42
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.42
KOG0319|consensus	775		99.41
KOG0640|consensus	430		99.41
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.41
KOG1027|consensus	903		99.41
KOG0606|consensus	1205		99.4
PTZ00421	493	coronin; Provisional	99.4
KOG0285|consensus	460		99.4
KOG0664|consensus	449		99.4
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.39
KOG0315|consensus	311		99.38
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.37
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.36
KOG0196|consensus	996		99.36
KOG0291|consensus	893		99.36
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.35
KOG1332|consensus	299		99.34
KOG0295|consensus	406		99.34
KOG0587|consensus	953		99.34
KOG0275|consensus	508		99.34
PTZ00421	493	coronin; Provisional	99.33
KOG0265|consensus	338		99.33
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.32
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.32
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.32
KOG0286|consensus	343		99.32
KOG0285|consensus	460		99.31
KOG0282|consensus	503		99.3
KOG1025|consensus	1177		99.3
KOG0313|consensus	423		99.3
KOG1024|consensus	563		99.29
KOG1407|consensus	313		99.29
KOG0319|consensus	775		99.28
KOG0273|consensus	524		99.28
KOG0273|consensus	524		99.27
KOG1094|consensus	807		99.27
KOG0647|consensus	347		99.26
KOG0293|consensus	519		99.26
PTZ00420	568	coronin; Provisional	99.26
KOG0984|consensus	282		99.25
KOG0284|consensus	464		99.25
KOG0293|consensus	519		99.24
KOG1034|consensus	385		99.24
KOG0302|consensus	440		99.24
KOG0278|consensus	334		99.23
KOG0275|consensus	508		99.22
KOG0973|consensus	942		99.21
KOG0284|consensus	464		99.21
KOG0316|consensus	307		99.21
KOG4283|consensus	397		99.2
KOG0640|consensus	430		99.2
KOG0296|consensus	399		99.2
KOG0645|consensus	312		99.18
KOG0641|consensus	350		99.18
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.17
KOG0264|consensus	422		99.17
PTZ00420	568	coronin; Provisional	99.17
KOG0310|consensus	487		99.17
KOG0269|consensus	839		99.16
KOG0276|consensus	794		99.16
KOG0643|consensus	327		99.15
KOG0281|consensus	499		99.15
KOG0316|consensus	307		99.15
KOG0772|consensus	641		99.14
KOG1445|consensus	1012		99.14
KOG0264|consensus	422		99.13
KOG2041|consensus	1189		99.12
KOG0647|consensus	347		99.11
KOG0292|consensus	1202		99.11
KOG0302|consensus	440		99.1
KOG0642|consensus	577		99.09
KOG0603|consensus	612		99.08
KOG4283|consensus	397		99.08
KOG0277|consensus	311		99.08
KOG0639|consensus	705		99.07
KOG0306|consensus	888		99.07
KOG0305|consensus	484		99.07
KOG0318|consensus	603		99.06
KOG2096|consensus	420		99.05
KOG2445|consensus	361		99.05
KOG0590|consensus	601		99.04
KOG0283|consensus	712		99.04
KOG0308|consensus	735		99.04
KOG1009|consensus	434		99.02
KOG0267|consensus	825		99.02
KOG0265|consensus	338		99.02
KOG0306|consensus	888		99.02
KOG0286|consensus	343		99.02
KOG2394|consensus	636		99.01
KOG0296|consensus	399		99.0
KOG0276|consensus	794		98.99
KOG0973|consensus	942		98.99
KOG0281|consensus	499		98.99
KOG0322|consensus	323		98.98
KOG0771|consensus	398		98.98
KOG0282|consensus	503		98.98
KOG1446|consensus	311		98.97
KOG0576|consensus	829		98.97
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.97
KOG1407|consensus	313		98.97
KOG0313|consensus	423		98.96
KOG0303|consensus	472		98.95
KOG0646|consensus	476		98.95
KOG0277|consensus	311		98.94
KOG1332|consensus	299		98.93
KOG0292|consensus	1202		98.93
KOG0267|consensus	825		98.92

>KOG0575|consensus

Probab=99.91  E-value=2e-24  Score=171.24  Aligned_cols=110  Identities=31%  Similarity=0.578  Sum_probs=98.3

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +.+|||+|||+|                             +++.+||||+|||+|.||+|+|||...+..+++..|...
T Consensus       154 ~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~  233 (592)
T KOG0575|consen  154 NMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN  233 (592)
T ss_pred             cCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc
Confidence            458999999999                             289999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCCccccccccccCC
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQ  116 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  116 (205)
                      .+.+|.    .++.++++||.++|+.+|.+||++.+++.|+||..-..+...+.+++.-.|+.
T Consensus       234 ~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp~~~l~~~p~~  292 (592)
T KOG0575|consen  234 EYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARLPSSCLTMVPRF  292 (592)
T ss_pred             Cccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCCCccccccCCcC
Confidence            999997    69999999999999999999999999999999977666666666665544443

>KOG0033|consensus

Probab=99.90  E-value=7.1e-24  Score=151.99  Aligned_cols=96  Identities=34%  Similarity=0.680  Sum_probs=91.9

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ..-+||+|||+|                            |+..+|||++||+||-||.|.+||.+++...+++.|.++.
T Consensus       149 ~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~  228 (355)
T KOG0033|consen  149 GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA  228 (355)
T ss_pred             CCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence            456899999999                            5999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.++++.|+++++++++||.+||..||.+|+++.+.+.|||+.+
T Consensus       229 yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  229 YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            99999999999999999999999999999999999999999964

>KOG0615|consensus

Probab=99.89  E-value=5.5e-25  Score=167.38  Aligned_cols=98  Identities=34%  Similarity=0.643  Sum_probs=90.1

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEE-TRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~-~~~~i   50 (205)
                      +-.+||+|||+|+                               ..++|+||+||++|-+|+|.+||.+..... +...|
T Consensus       315 ~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI  394 (475)
T KOG0615|consen  315 DCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI  394 (475)
T ss_pred             ceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH
Confidence            4579999999992                               568999999999999999999998875555 88999


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .++.+.+-+..|..++.++++||.+||..||++|+++.++++|||++...
T Consensus       395 ~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  395 LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            99999999999999999999999999999999999999999999998754

>KOG0592|consensus

Probab=99.89  E-value=3.8e-23  Score=162.14  Aligned_cols=98  Identities=35%  Similarity=0.620  Sum_probs=91.6

Q ss_pred             CCCeEEEEecCCCC------------------------------------------CcchhHHHHHHHHHHHHcCCCCCC
Q psy14043          2 NGAVLKLIDLGSSA------------------------------------------GPSTDMWSLGVLLYILLSGVSPFL   39 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------------------~~~~DvwslG~~~~~ll~g~~pf~   39 (205)
                      .+|++||+|||.|.                                          ++.+|+|+|||++|+|+.|++||.
T Consensus       209 ~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr  288 (604)
T KOG0592|consen  209 KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR  288 (604)
T ss_pred             CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence            47999999999992                                          889999999999999999999999


Q ss_pred             CCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         40 DESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        40 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      +.+..-++++|....+.+|+    .+++.+++||.++|..+|.+|++..++.+||||..+.+.+
T Consensus       289 a~NeyliFqkI~~l~y~fp~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  289 AANEYLIFQKIQALDYEFPE----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             cccHHHHHHHHHHhcccCCC----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence            99999999999999999997    6899999999999999999999999999999998776543

>KOG0588|consensus

Probab=99.89  E-value=2.1e-23  Score=166.94  Aligned_cols=93  Identities=27%  Similarity=0.549  Sum_probs=87.2

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .+.|||+|||||.                             +.++||||+|||||.||+|+.||.+.+...++.++.++
T Consensus       148 ~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G  227 (786)
T KOG0588|consen  148 KNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG  227 (786)
T ss_pred             ccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC
Confidence            3459999999991                             89999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+.+|.    ++++++++||.+||..||++|++.++++.|||+...
T Consensus       228 ~f~MPs----~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  228 VFEMPS----NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY  269 (786)
T ss_pred             cccCCC----cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence            999996    799999999999999999999999999999999643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=6.9e-22  Score=169.54  Aligned_cols=76  Identities=26%  Similarity=0.331  Sum_probs=55.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++||||+||++|||++|.+|+....  .....+.....  ++.. ....++..+++.+||..+|.+||++.++++|||
T Consensus       193 ~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        193 NCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             CchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chhh-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchh
Confidence            888999999999999999999875321  22222222211  2111 123566789999999999999999999999998


Q ss_pred             h
Q psy14043         96 F   96 (205)
Q Consensus        96 ~   96 (205)
                      +
T Consensus       268 ~  268 (793)
T PLN00181        268 I  268 (793)
T ss_pred             h
Confidence            7

>KOG0605|consensus

Probab=99.88  E-value=1.2e-22  Score=159.16  Aligned_cols=99  Identities=24%  Similarity=0.383  Sum_probs=82.5

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---ccccc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQLL   91 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l   91 (205)
                      |+..+|+||||||+||||.|.|||.+.+..+++.+|.+....+..+.....+++++|||.++|. ||++|+.   +.++.
T Consensus       365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK  443 (550)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence            3899999999999999999999999999999999999877544444444688999999999999 9999974   78999


Q ss_pred             ccchhhhcccCCCccccccccccC
Q psy14043         92 QVAWFAEIAIPNNTKVNCLAWHQN  115 (205)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~  115 (205)
                      +||||+.+.+.+-.... .+|.|+
T Consensus       444 ~HPfF~~v~W~~l~~~~-apfvP~  466 (550)
T KOG0605|consen  444 KHPFFKGVDWDHLREMP-APFVPQ  466 (550)
T ss_pred             cCCccccCCcchhhcCC-CCCCCC
Confidence            99999988876543322 445554

>KOG0599|consensus

Probab=99.88  E-value=6.4e-23  Score=149.29  Aligned_cols=99  Identities=30%  Similarity=0.528  Sum_probs=93.7

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      ++.++||+|||+|                                  |+..+|+|++||++|.||.|.+||.+....-++
T Consensus       158 dn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML  237 (411)
T KOG0599|consen  158 DNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML  237 (411)
T ss_pred             cccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH
Confidence            5788999999999                                  489999999999999999999999998888899


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+|..+.+.+..+.|.+++.+++|||.++|+.||.+|++++++++||||..+.
T Consensus       238 R~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~  290 (411)
T KOG0599|consen  238 RMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA  290 (411)
T ss_pred             HHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence            99999999999999999999999999999999999999999999999996543

>KOG0694|consensus

Probab=99.87  E-value=2.2e-22  Score=161.69  Aligned_cols=96  Identities=31%  Similarity=0.517  Sum_probs=89.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++|+|+|||++||||.|+.||.|.+.++++..|..
T Consensus       503 ~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~  582 (694)
T KOG0694|consen  503 TEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN  582 (694)
T ss_pred             ccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence            3699999999999                             69999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~~  101 (205)
                      ..+.+|.    .++.++.+++.++|+++|++|+.     +.++.+||||+.+.+
T Consensus       583 d~~~yP~----~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w  632 (694)
T KOG0694|consen  583 DEVRYPR----FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW  632 (694)
T ss_pred             CCCCCCC----cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence            9999887    79999999999999999999985     478999999988764

>KOG0616|consensus

Probab=99.87  E-value=3.6e-22  Score=146.48  Aligned_cols=96  Identities=28%  Similarity=0.548  Sum_probs=88.6

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .+|+|||+|||+|                          |+.++|+|+|||++|||+.|.+||...+..+++.+|..+..
T Consensus       179 ~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v  258 (355)
T KOG0616|consen  179 QNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV  258 (355)
T ss_pred             cCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc
Confidence            3699999999999                          49999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhccc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIAI  101 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~~  101 (205)
                      .+|+    .+++++++|+.++|++|-.+|.     ...++..||||+.+.+
T Consensus       259 ~fP~----~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W  305 (355)
T KOG0616|consen  259 KFPS----YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW  305 (355)
T ss_pred             cCCc----ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence            9997    6899999999999999999994     4578999999987654

>KOG0581|consensus

Probab=99.87  E-value=4e-22  Score=150.09  Aligned_cols=99  Identities=29%  Similarity=0.379  Sum_probs=85.2

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-----SEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-----~~~~~~~~i   50 (205)
                      .|.+||||||.+                           |+.++||||||+++.|+++|+.||...     ...+++..|
T Consensus       215 kGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I  294 (364)
T KOG0581|consen  215 KGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI  294 (364)
T ss_pred             CCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH
Confidence            689999999999                           599999999999999999999999764     677888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ..++++-.+..  .+|+++++||..||+++|.+|+++.++++|||+++....+
T Consensus       295 v~~ppP~lP~~--~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~  345 (364)
T KOG0581|consen  295 VDEPPPRLPEG--EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN  345 (364)
T ss_pred             hcCCCCCCCcc--cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence            87654333221  4999999999999999999999999999999998765443

>KOG0598|consensus

Probab=99.86  E-value=5.4e-22  Score=149.30  Aligned_cols=98  Identities=31%  Similarity=0.537  Sum_probs=87.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +.|+++|+|||++                             |+..+|+||||+++|||++|.+||.+.+..+.+..|.+
T Consensus       160 ~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~  239 (357)
T KOG0598|consen  160 EQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILK  239 (357)
T ss_pred             CCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhc
Confidence            4699999999999                             59999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC----CcccccccchhhhcccC
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP----TAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~----~~~~~l~~~~~~~~~~~  102 (205)
                      ++...++.   -++.++++++.++|.++|.+|.    .+.++.+||||..+.+.
T Consensus       240 ~k~~~~p~---~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  240 GKLPLPPG---YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             CcCCCCCc---cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence            88554442   3899999999999999999996    57889999999877653

>KOG0604|consensus

Probab=99.85  E-value=4.8e-22  Score=146.22  Aligned_cols=100  Identities=35%  Similarity=0.639  Sum_probs=90.5

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~----~~~~~~   49 (205)
                      .|..+||+|||+|                            |+..+|+||+||++|-||+|.+||.....    .....+
T Consensus       199 ~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~r  278 (400)
T KOG0604|consen  199 PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRR  278 (400)
T ss_pred             CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhH
Confidence            3678999999999                            48999999999999999999999976533    356788


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      |..+.+.||.+.|..+|.+++++|+++|..+|.+|++..+++.|||+.....
T Consensus       279 I~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  279 IRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             hhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence            9999999999999999999999999999999999999999999999976543

>KOG0660|consensus

Probab=99.85  E-value=3.3e-21  Score=144.70  Aligned_cols=107  Identities=23%  Similarity=0.285  Sum_probs=87.4

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      +..+||+|||+|                                |+.++||||+|||+.||++|++.|.|.+...++..|
T Consensus       161 ~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI  240 (359)
T KOG0660|consen  161 DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI  240 (359)
T ss_pred             CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence            456899999999                                599999999999999999999999998887777777


Q ss_pred             HhCC-----------------------CCCCCC----cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         51 SVAD-----------------------YSFPPE----QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        51 ~~~~-----------------------~~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ....                       +..|+.    ..++.++++.+|+.+||..||.+|+++++.++|||+.....+.
T Consensus       241 ~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  241 LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence            5421                       111111    2346899999999999999999999999999999998877666


Q ss_pred             Cccccc
Q psy14043        104 NTKVNC  109 (205)
Q Consensus       104 ~~~~~~  109 (205)
                      ..++.+
T Consensus       321 dEP~~~  326 (359)
T KOG0660|consen  321 DEPVCQ  326 (359)
T ss_pred             cCCCCC
Confidence            655433

>KOG0593|consensus

Probab=99.83  E-value=9.7e-21  Score=139.58  Aligned_cols=97  Identities=26%  Similarity=0.408  Sum_probs=82.1

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .+|++||||||+|                              |+.++||||+||++.||++|.+.|+|.+..++++.|.
T Consensus       136 ~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~  215 (396)
T KOG0593|consen  136 QNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIR  215 (396)
T ss_pred             cCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHH
Confidence            3689999999999                              5999999999999999999999999999999998886


Q ss_pred             hCCCC-------------------CCC--------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         52 VADYS-------------------FPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        52 ~~~~~-------------------~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..--.                   +|.        ...++++.-+.||+++||..||.+|++.++++.|+||..
T Consensus       216 ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  216 KTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             HHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            53211                   111        112357788999999999999999999999999999954

>KOG0032|consensus

Probab=99.82  E-value=4.1e-20  Score=144.98  Aligned_cols=97  Identities=44%  Similarity=0.702  Sum_probs=92.5

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+|++|||+|                            |+..+||||+||++|.|++|.+||.+.+..+...+|..+.
T Consensus       175 ~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~  254 (382)
T KOG0032|consen  175 SGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD  254 (382)
T ss_pred             CCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC
Confidence            368999999999                            4999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.++.+.|..++..+++||.++|.+||..|+++.++++|||+...
T Consensus       255 ~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  255 FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            999999999999999999999999999999999999999998765

>KOG0578|consensus

Probab=99.82  E-value=2e-20  Score=147.53  Aligned_cols=96  Identities=23%  Similarity=0.441  Sum_probs=83.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|.+||+|||++                             |++++||||||++..||+-|.+||..++....++.|..
T Consensus       404 ~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~  483 (550)
T KOG0578|consen  404 MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  483 (550)
T ss_pred             cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh
Confidence            4688999999998                             69999999999999999999999999888888888875


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ...+ ....++.+|+.+++|+.+||+.|+.+|+++.++|+|||+..
T Consensus       484 ng~P-~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  484 NGTP-KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             cCCC-CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence            4321 22334579999999999999999999999999999999944

>KOG0663|consensus

Probab=99.82  E-value=4.6e-20  Score=137.61  Aligned_cols=103  Identities=27%  Similarity=0.391  Sum_probs=84.6

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +.|.+||+|||+|                              |+.++|+||+|||+.||++++|.|.|.+..+++.+|-
T Consensus       212 ~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If  291 (419)
T KOG0663|consen  212 HKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIF  291 (419)
T ss_pred             cCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHH
Confidence            5799999999999                              5999999999999999999999999999999988885


Q ss_pred             hCCC-------------------CCCCC-------cC--CCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         52 VADY-------------------SFPPE-------QC--GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        52 ~~~~-------------------~~~~~-------~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      +..-                   .++..       ..  ..++..+.+|+..+|.+||.+|.++.+.++|.||.....+.
T Consensus       292 ~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~  371 (419)
T KOG0663|consen  292 KLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI  371 (419)
T ss_pred             HHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence            4211                   11110       00  12568999999999999999999999999999998865544


Q ss_pred             C
Q psy14043        104 N  104 (205)
Q Consensus       104 ~  104 (205)
                      .
T Consensus       372 ~  372 (419)
T KOG0663|consen  372 D  372 (419)
T ss_pred             C
Confidence            3

>KOG0597|consensus

Probab=99.82  E-value=1.6e-20  Score=148.51  Aligned_cols=93  Identities=29%  Similarity=0.427  Sum_probs=86.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++|+||||+|                             |+..+|+||+||++||+..|+|||...+..++...|.+
T Consensus       135 ~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~  214 (808)
T KOG0597|consen  135 KGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK  214 (808)
T ss_pred             CCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc
Confidence            4689999999999                             59999999999999999999999999999999999998


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ....+|.    .++..+++|+..+|.+||.+|++..+++.|||++.
T Consensus       215 d~v~~p~----~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  215 DPVKPPS----TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             CCCCCcc----cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence            8777665    68999999999999999999999999999999864

>KOG0983|consensus

Probab=99.82  E-value=2.7e-20  Score=135.67  Aligned_cols=98  Identities=23%  Similarity=0.376  Sum_probs=84.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~   49 (205)
                      +.|+||+||||++                               |+..+||||||+.++||.||+.||.+ .+..+.+..
T Consensus       227 e~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk  306 (391)
T KOG0983|consen  227 ERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK  306 (391)
T ss_pred             cCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH
Confidence            4699999999999                               58889999999999999999999987 466788888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      |.+.+++..+.. ..+++++.+|+..||++|+.+||.-.++++|+|+....
T Consensus       307 vln~ePP~L~~~-~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  307 VLNEEPPLLPGH-MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             HHhcCCCCCCcc-cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            888666433322 24899999999999999999999999999999987654

>KOG0696|consensus

Probab=99.81  E-value=9.9e-20  Score=139.61  Aligned_cols=96  Identities=32%  Similarity=0.529  Sum_probs=87.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++|+||+||+||||+.|++||.|++..++++.|..
T Consensus       485 ~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e  564 (683)
T KOG0696|consen  485 SEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME  564 (683)
T ss_pred             cCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            3699999999999                             59999999999999999999999999999999999998


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~~  101 (205)
                      ....+|.    .+|.++.++++.+|.++|.+|+.+     .++..||||+.+.+
T Consensus       565 hnvsyPK----slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  565 HNVSYPK----SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             ccCcCcc----cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence            8877775    699999999999999999999754     57899999987754

>KOG4717|consensus

Probab=99.81  E-value=3.6e-20  Score=145.36  Aligned_cols=99  Identities=33%  Similarity=0.639  Sum_probs=90.5

Q ss_pred             CeEEEEecCCC----------------------------C-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          4 AVLKLIDLGSS----------------------------A-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         4 ~~~kl~Dfg~~----------------------------~-~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      |.+||+|||++                            | .+++||||||||||.|.+|++||...+..+.+.+|..++
T Consensus       156 GlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK  235 (864)
T KOG4717|consen  156 GLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK  235 (864)
T ss_pred             CceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc
Confidence            78999999999                            1 778999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCCcc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK  106 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~  106 (205)
                      +..|.    .++.++++||.+||.++|.+|.+.+++..++|++....+....
T Consensus       236 YtvPs----hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~  283 (864)
T KOG4717|consen  236 YTVPS----HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTA  283 (864)
T ss_pred             ccCch----hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCcccc
Confidence            98886    6899999999999999999999999999999998766554443

>KOG0596|consensus

Probab=99.81  E-value=2.9e-20  Score=146.49  Aligned_cols=87  Identities=24%  Similarity=0.364  Sum_probs=64.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhC--CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHISVA--DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.++||||||||+|+|+.|++||.... ...-+..|..-  ++++|..  . -..++.++++.||..||.+|++..++++
T Consensus       550 ~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~--~-~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  550 SRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDI--P-ENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             cCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCC--C-CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            789999999999999999999996543 23334444332  1233321  1 1234899999999999999999999999


Q ss_pred             cchhhhcccCCCc
Q psy14043         93 VAWFAEIAIPNNT  105 (205)
Q Consensus        93 ~~~~~~~~~~~~~  105 (205)
                      |||+.....++..
T Consensus       627 hpFl~~~~i~~~~  639 (677)
T KOG0596|consen  627 HPFLQIQPIPVEQ  639 (677)
T ss_pred             CcccccccccchH
Confidence            9999776555443

>KOG0659|consensus

Probab=99.81  E-value=1.2e-19  Score=131.40  Aligned_cols=101  Identities=29%  Similarity=0.436  Sum_probs=83.9

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .+|++||+|||+|                              |+..+||||+|||+.||+.|.|-|.|.+..+++..|-
T Consensus       136 ~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If  215 (318)
T KOG0659|consen  136 SDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIF  215 (318)
T ss_pred             CCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHH
Confidence            4799999999999                              5899999999999999999999999999999988886


Q ss_pred             hCCCCCCCC------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         52 VADYSFPPE------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        52 ~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      +.--...+.                        .....+.++.||+.+++.++|.+|+++.|+++|+||.....+
T Consensus       216 ~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p  290 (318)
T KOG0659|consen  216 RALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP  290 (318)
T ss_pred             HHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence            532111111                        123457888999999999999999999999999999875443

>KOG0583|consensus

Probab=99.80  E-value=1.4e-19  Score=141.91  Aligned_cols=91  Identities=38%  Similarity=0.659  Sum_probs=85.8

Q ss_pred             CeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          4 AVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         4 ~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +.+||+|||++.                               +.++||||+||+||.|++|..||...+...++..|.+
T Consensus       158 ~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~  237 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK  237 (370)
T ss_pred             CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence            899999999982                               6889999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCC-CHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHI-SVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.+.+|.    .+ ++++++|+.+||..+|.+|+++.+++.|+|++.
T Consensus       238 ~~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  238 GEFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999887    45 999999999999999999999999999999986

>KOG0585|consensus

Probab=99.80  E-value=7.7e-20  Score=141.86  Aligned_cols=96  Identities=32%  Similarity=0.540  Sum_probs=87.9

Q ss_pred             CCCeEEEEecCCCC--------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESE   43 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~   43 (205)
                      .+|++||+|||.++                                      +.+.||||+||+||-|+.|+.||.+...
T Consensus       245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~  324 (576)
T KOG0585|consen  245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE  324 (576)
T ss_pred             CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence            46999999999883                                      7899999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         44 EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        44 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+++.+|.+....+|...  .+..+++|||++||.+||++|++..++..|||+...
T Consensus       325 ~~l~~KIvn~pL~fP~~p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  325 LELFDKIVNDPLEFPENP--EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HHHHHHHhcCcccCCCcc--cccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            999999999988888642  578999999999999999999999999999998543

>KOG0600|consensus

Probab=99.80  E-value=1.4e-19  Score=141.14  Aligned_cols=98  Identities=31%  Similarity=0.416  Sum_probs=83.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      ++|++||+|||+|                               |+.++|+||+|||+.||++|+++|.|.+..+++..|
T Consensus       253 n~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI  332 (560)
T KOG0600|consen  253 NNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI  332 (560)
T ss_pred             CCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH
Confidence            5799999999999                               699999999999999999999999999999999999


Q ss_pred             HhCCCCCCCC-------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVADYSFPPE-------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+..-.....                         ....+++.+.+|+..+|..||++|.++.+++++.||...
T Consensus       333 fklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  333 FKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             HHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence            6532111111                         123478999999999999999999999999999999443

>KOG0690|consensus

Probab=99.79  E-value=1.2e-19  Score=135.32  Aligned_cols=96  Identities=28%  Similarity=0.562  Sum_probs=88.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|+|||+|||++                             |+.++|+|-+||++|||++|+.||...+...++..|..
T Consensus       303 kDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~  382 (516)
T KOG0690|consen  303 KDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM  382 (516)
T ss_pred             cCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh
Confidence            4799999999999                             59999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~~  101 (205)
                      ....+|.    .++++++.|+..+|.+||.+|+     .+.++.+|+||..+.+
T Consensus       383 ed~kFPr----~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  383 EDLKFPR----TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             hhccCCc----cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence            9999997    6999999999999999999997     3678999999976654

>KOG0603|consensus

Probab=99.79  E-value=1.8e-19  Score=144.05  Aligned_cols=89  Identities=31%  Similarity=0.511  Sum_probs=77.9

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~~i~~~~   54 (205)
                      +.|+|+|+|||.+                          |+.++||||||++||+||+|+.||...... ++...|....
T Consensus       451 ~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~  530 (612)
T KOG0603|consen  451 SAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK  530 (612)
T ss_pred             CCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc
Confidence            4689999999999                          499999999999999999999999865444 6666666543


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +.      ..+|.++++|+.+||+.+|.+|+++.++..|+|+
T Consensus       531 ~s------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  531 FS------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             cc------cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            33      4799999999999999999999999999999999

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=3.7e-19  Score=136.19  Aligned_cols=95  Identities=29%  Similarity=0.595  Sum_probs=83.9

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .+|.+||+|||++                          ++.++||||+||++|+|++|+.||.+.+..+....+.....
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  215 (291)
T cd05612         136 KEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL  215 (291)
T ss_pred             CCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc
Confidence            3678999999986                          26789999999999999999999999888888888888777


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      .++.    .+++.+++||.+||..||.+|++     +.++++|+|+..+.
T Consensus       216 ~~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~  261 (291)
T cd05612         216 EFPR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD  261 (291)
T ss_pred             CCCc----cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence            6665    57999999999999999999995     89999999997643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0580|consensus

Probab=99.79  E-value=2.2e-19  Score=128.33  Aligned_cols=92  Identities=36%  Similarity=0.583  Sum_probs=86.5

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .|.+|++|||-+                           ++..+|+|++|++.||++.|.+||...+..+++.+|.+..+
T Consensus       160 ~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~  239 (281)
T KOG0580|consen  160 AGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL  239 (281)
T ss_pred             CCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc
Confidence            588999999988                           39999999999999999999999999999999999999998


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .+|.    .++.+++|+|.+||.++|.+|....+++.|||+..
T Consensus       240 ~~p~----~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  240 KFPS----TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             cCCc----ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            8885    69999999999999999999999999999999864

>KOG0658|consensus

Probab=99.79  E-value=2.9e-19  Score=134.61  Aligned_cols=101  Identities=30%  Similarity=0.456  Sum_probs=84.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +.|.+||||||.|                             |+.++||||.|||+.||+.|++.|.|++..+++..|.+
T Consensus       161 ~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik  240 (364)
T KOG0658|consen  161 DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIK  240 (364)
T ss_pred             CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence            3589999999999                             59999999999999999999999999999888888754


Q ss_pred             CC-----------------CCCCC---C-----cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         53 AD-----------------YSFPP---E-----QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        53 ~~-----------------~~~~~---~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      .-                 ..+|.   .     .....++++.+|+.++|.++|.+|.++.+++.||||.....+
T Consensus       241 ~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  241 VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            21                 11111   1     223578999999999999999999999999999999876544

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.78  E-value=5.3e-19  Score=135.13  Aligned_cols=95  Identities=25%  Similarity=0.407  Sum_probs=75.4

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++||||+||++|+|++|++||.+.+..+.+..+.
T Consensus       138 ~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~  217 (288)
T cd07871         138 EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIF  217 (288)
T ss_pred             CCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            3678999999986                              2678999999999999999999999887776666554


Q ss_pred             hCCCC-------------------CCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYS-------------------FPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~-------------------~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....                   ++.       .....+++++++||.+||+.+|.+|+++.++++||||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         218 RLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            32111                   000       0112468899999999999999999999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0591|consensus

Probab=99.78  E-value=5.5e-19  Score=129.24  Aligned_cols=84  Identities=33%  Similarity=0.522  Sum_probs=75.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++|++||.|||++                             |++++||||+||++|||..-++||.|.+..++..+|.+
T Consensus       163 ~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~q  242 (375)
T KOG0591|consen  163 ANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQ  242 (375)
T ss_pred             CCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHc
Confidence            5799999999999                             59999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA   87 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   87 (205)
                      +.++..+.  ..+|.+++.+|..|+..||+.||+.
T Consensus       243 gd~~~~p~--~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  243 GDYPPLPD--EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             CCCCCCcH--HHhhhHHHHHHHHHccCCcccCCCc
Confidence            97752221  2589999999999999999999985

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.78  E-value=2.6e-19  Score=139.01  Aligned_cols=95  Identities=28%  Similarity=0.573  Sum_probs=83.8

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|||++|+.||.+.+.......+..
T Consensus       130 ~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~  209 (323)
T cd05571         130 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  209 (323)
T ss_pred             CCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            4678999999986                             37789999999999999999999998888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++++||.+||..+|++|+     ++.++++|+|+..+.
T Consensus       210 ~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~  258 (323)
T cd05571         210 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN  258 (323)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            7666654    6899999999999999999999     799999999997653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.78  E-value=4.5e-19  Score=138.03  Aligned_cols=94  Identities=30%  Similarity=0.545  Sum_probs=83.1

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      +++.+||+|||++                          ++.++|||||||++|+|++|..||.+.+..+....+..+..
T Consensus       153 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~  232 (329)
T PTZ00263        153 NKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL  232 (329)
T ss_pred             CCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc
Confidence            4688999999987                          27789999999999999999999999888888888887776


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEI   99 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~   99 (205)
                      .+|.    .+++++++||.+||+.||.+|++     +.+++.|||+...
T Consensus       233 ~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        233 KFPN----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            6554    58999999999999999999996     6899999999764

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.77  E-value=7.5e-19  Score=134.24  Aligned_cols=95  Identities=20%  Similarity=0.260  Sum_probs=76.4

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++||||+||++|||++|++||.+.+..+.+..+...
T Consensus       145 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~  224 (290)
T cd07862         145 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV  224 (290)
T ss_pred             CCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence            4678999999987                            267899999999999999999999988877776666542


Q ss_pred             CCCCCC-----------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPP-----------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....+                       .....+++.+++|+.+||+.+|++||++.++++||||
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         225 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            110000                       0113478899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0198|consensus

Probab=99.77  E-value=1.2e-19  Score=137.81  Aligned_cols=96  Identities=29%  Similarity=0.501  Sum_probs=77.2

Q ss_pred             CCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHH
Q psy14043          3 GAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRA   48 (205)
Q Consensus         3 ~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~   48 (205)
                      ++.+||+|||++.                                 ..++||||+||++.||+||++||.. ....+.+.
T Consensus       154 ~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~  233 (313)
T KOG0198|consen  154 NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALL  233 (313)
T ss_pred             CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHH
Confidence            5899999999872                                 3389999999999999999999987 34444444


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+.... ..| ..+..+++++++|+.+|+.++|.+||++.++++|||.....
T Consensus       234 ~ig~~~-~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  234 LIGRED-SLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHhccC-CCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            444433 112 34457999999999999999999999999999999986643

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.77  E-value=9.7e-19  Score=135.65  Aligned_cols=95  Identities=29%  Similarity=0.559  Sum_probs=83.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|+.||.+.+..+....+..
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~  210 (320)
T cd05590         131 HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN  210 (320)
T ss_pred             CCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence            4678999999976                             26789999999999999999999999988888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc------ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA------GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++++||.+||+.+|.+|+++      .++++||||....
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~  260 (320)
T cd05590         211 DEVVYPT----WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD  260 (320)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence            7665554    589999999999999999999998      7899999997653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.77  E-value=5.3e-19  Score=142.56  Aligned_cols=98  Identities=26%  Similarity=0.334  Sum_probs=77.2

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||+|                             |+.++||||+||++|||++|.+||.+.+..+.+..+.+.
T Consensus       207 ~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~  286 (440)
T PTZ00036        207 THTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQV  286 (440)
T ss_pred             CCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            357999999988                             267899999999999999999999988776665555431


Q ss_pred             C-----------------CCCCCC--------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 D-----------------YSFPPE--------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~-----------------~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .                 ..++..        .+...++++++||.+||+++|.+|+++.++++||||..+.
T Consensus       287 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        287 LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            1                 111110        1124678999999999999999999999999999997654

>PTZ00284 protein kinase; Provisional

Probab=99.77  E-value=6.1e-19  Score=143.37  Aligned_cols=97  Identities=25%  Similarity=0.260  Sum_probs=73.9

Q ss_pred             CeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC
Q psy14043          4 AVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF   57 (205)
Q Consensus         4 ~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~   57 (205)
                      +.+||+|||.+                          |+.++|||||||++|||++|++||.+.+..+.+..+......+
T Consensus       285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~  364 (467)
T PTZ00284        285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL  364 (467)
T ss_pred             ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence            36999999965                          3778999999999999999999999887766655554322111


Q ss_pred             CCCc--------------------------------------CCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         58 PPEQ--------------------------------------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        58 ~~~~--------------------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      |...                                      .....+.+.+||.+||++||.+|+++.++++||||...
T Consensus       365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence            1000                                      00014567799999999999999999999999999765


Q ss_pred             c
Q psy14043        100 A  100 (205)
Q Consensus       100 ~  100 (205)
                      .
T Consensus       445 ~  445 (467)
T PTZ00284        445 Y  445 (467)
T ss_pred             C
Confidence            3

>KOG0201|consensus

Probab=99.77  E-value=1.6e-19  Score=138.78  Aligned_cols=94  Identities=26%  Similarity=0.409  Sum_probs=81.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|.+||+|||.+                             |+.++||||||++.|||++|.||+....+...+..|-+
T Consensus       146 ~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk  225 (467)
T KOG0201|consen  146 ESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK  225 (467)
T ss_pred             ccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC
Confidence            4589999999999                             69999999999999999999999998888666666655


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+   +.....+++.+++|+..||.++|+.||++.+++.|+|++.
T Consensus       226 ~~P---P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  226 SAP---PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             CCC---CccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            443   2233378999999999999999999999999999999976

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.77  E-value=1.3e-18  Score=132.75  Aligned_cols=95  Identities=32%  Similarity=0.376  Sum_probs=73.8

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++|+||+||++|||++|++||.+.+..+....+.
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~  214 (287)
T cd07848         135 HNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ  214 (287)
T ss_pred             CCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4678999999987                              2678999999999999999999998876655544443


Q ss_pred             hCCCCC-------------------CCC---------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYSF-------------------PPE---------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~~-------------------~~~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ......                   +..         ....+++++++||.+||+.+|++|+++.++++||||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         215 KVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             HhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            221111                   100         012368889999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.77  E-value=9.1e-19  Score=136.87  Aligned_cols=95  Identities=26%  Similarity=0.526  Sum_probs=83.9

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .++.+||+|||++                          ++.++|+||+||++|||++|.+||.+.+.......+..+..
T Consensus       166 ~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~  245 (340)
T PTZ00426        166 KDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII  245 (340)
T ss_pred             CCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC
Confidence            4688999999987                          26789999999999999999999999888888888888776


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      .+|.    .+++.++++|.+||+.+|.+|+     ++.++++|||+..+.
T Consensus       246 ~~p~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        246 YFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             CCCC----CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            6654    5799999999999999999996     899999999997654

>KOG0661|consensus

Probab=99.76  E-value=1.6e-18  Score=134.51  Aligned_cols=97  Identities=33%  Similarity=0.450  Sum_probs=82.1

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +.+|||+|||+|                             |+.++|||++|||++|+++-++.|.|.+..+++.+|...
T Consensus       146 ~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~V  225 (538)
T KOG0661|consen  146 NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEV  225 (538)
T ss_pred             cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHH
Confidence            568999999999                             599999999999999999999999999999888888542


Q ss_pred             -------------------CCCCCCC-------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 -------------------DYSFPPE-------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 -------------------~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                                         .+.+|..       ...+.+.++.++|.+||..||.+||++.++++||||+..
T Consensus       226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence                               1222221       123578999999999999999999999999999999643

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.1e-18  Score=134.81  Aligned_cols=94  Identities=30%  Similarity=0.532  Sum_probs=82.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++||||+||++|+|++|++||.+.+..+.+..+..
T Consensus       128 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~  207 (312)
T cd05585         128 YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ  207 (312)
T ss_pred             CCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence            4688999999987                             26789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---cccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l~~~~~~~~   99 (205)
                      ....++.    .+++++++||.+||..+|.+|++   +.+++.|||+...
T Consensus       208 ~~~~~~~----~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         208 EPLRFPD----GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCCCCC----cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            7666554    68999999999999999999974   6889999999764

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.76  E-value=1.1e-18  Score=135.29  Aligned_cols=95  Identities=31%  Similarity=0.550  Sum_probs=83.5

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|+.||.+.+..+.+..+..
T Consensus       131 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~  210 (321)
T cd05591         131 AEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH  210 (321)
T ss_pred             CCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            4688999999976                             27789999999999999999999999998888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-------Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-------TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-------~~~~~l~~~~~~~~~  100 (205)
                      ....+|.    .+++++.+++.+||+.+|++|+       ++.++++|||+....
T Consensus       211 ~~~~~p~----~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~  261 (321)
T cd05591         211 DDVLYPV----WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID  261 (321)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence            7665554    5799999999999999999999       788899999996643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.76  E-value=1.1e-18  Score=133.23  Aligned_cols=99  Identities=26%  Similarity=0.384  Sum_probs=75.1

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++||||+||++|+|++|+.||.+.........+...
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~  216 (285)
T cd05631         137 DRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR  216 (285)
T ss_pred             CCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH
Confidence            3578999999987                            377899999999999999999999875443222222211


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      ...........+++++.+||.+||+.+|.+|++     +.++++||||....
T Consensus       217 ~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         217 VKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             hhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            111112223368999999999999999999997     78999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.76  E-value=1.8e-18  Score=134.27  Aligned_cols=95  Identities=32%  Similarity=0.537  Sum_probs=83.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++||||+||++|||++|++||.+.+..+....+..
T Consensus       136 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~  215 (323)
T cd05616         136 SEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME  215 (323)
T ss_pred             CCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            4678999999977                             27789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~  100 (205)
                      ....+|.    .+++++++++.+||+++|++|++.     .++++|+|+..+.
T Consensus       216 ~~~~~p~----~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~  264 (323)
T cd05616         216 HNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  264 (323)
T ss_pred             CCCCCCC----cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence            7766654    589999999999999999999975     7899999997654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.76  E-value=2e-18  Score=134.03  Aligned_cols=95  Identities=29%  Similarity=0.539  Sum_probs=83.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       136 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~  215 (324)
T cd05589         136 TEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN  215 (324)
T ss_pred             CCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            4688999999976                             26689999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++.++|.+||+.+|++|+     ++.++++|+|+....
T Consensus       216 ~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~  264 (324)
T cd05589         216 DEVRYPR----FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN  264 (324)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence            7666554    5899999999999999999999     578899999997653

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.76  E-value=2.7e-18  Score=132.91  Aligned_cols=95  Identities=31%  Similarity=0.545  Sum_probs=82.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~  210 (316)
T cd05619         131 TDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM  210 (316)
T ss_pred             CCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            3578999999976                             37789999999999999999999998888888888776


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc-cccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG-QLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~l~~~~~~~~~  100 (205)
                      ..+.++.    .++.+++++|.+||+.+|++|+++. ++++|||+..+.
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         211 DNPCYPR----WLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID  255 (316)
T ss_pred             CCCCCCc----cCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence            6555443    5899999999999999999999986 899999997754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.76  E-value=2.4e-18  Score=133.35  Aligned_cols=95  Identities=32%  Similarity=0.594  Sum_probs=83.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~  210 (318)
T cd05570         131 SEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE  210 (318)
T ss_pred             CCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence            4678999999976                             26789999999999999999999998888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++++||.+||..+|.+|+++     .++++|||+....
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~  259 (318)
T cd05570         211 DEVRYPR----WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID  259 (318)
T ss_pred             CCCCCCC----cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            6665554    589999999999999999999999     9999999997653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.76  E-value=2.8e-18  Score=133.29  Aligned_cols=95  Identities=34%  Similarity=0.545  Sum_probs=82.8

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|+.||.+.+..+.+..+..
T Consensus       136 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~  215 (324)
T cd05587         136 AEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME  215 (324)
T ss_pred             CCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            4678999999976                             26789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++.+++.+||..+|.+|++.     .++++|||+....
T Consensus       216 ~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~  264 (324)
T cd05587         216 HNVSYPK----SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID  264 (324)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            7665554    589999999999999999999976     7899999997653

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0197|consensus

Probab=99.76  E-value=1.5e-18  Score=136.17  Aligned_cols=87  Identities=28%  Similarity=0.416  Sum_probs=77.3

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++++||+|||+|+                              +.|+||||+||+|+|++| |+.||.+.+..+.+..+
T Consensus       338 ~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l  417 (468)
T KOG0197|consen  338 EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL  417 (468)
T ss_pred             cCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH
Confidence            46899999999992                              999999999999999999 99999999999999999


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      .++.....+   ..+|+++.+++..||..+|++||++..+.
T Consensus       418 e~GyRlp~P---~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  418 ERGYRLPRP---EGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             hccCcCCCC---CCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            987543333   37999999999999999999999998543

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.76  E-value=1.7e-18  Score=134.41  Aligned_cols=94  Identities=31%  Similarity=0.592  Sum_probs=83.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|||++|+.||.+.+..+....+..
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~  214 (323)
T cd05584         135 AQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK  214 (323)
T ss_pred             CCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            4688999999986                             26789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~   99 (205)
                      ....++.    .+++++++||.+||+.+|++|+     ++.++++|||+...
T Consensus       215 ~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         215 GKLNLPP----YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            7666554    5899999999999999999999     89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0610|consensus

Probab=99.75  E-value=1.6e-18  Score=132.51  Aligned_cols=87  Identities=30%  Similarity=0.570  Sum_probs=80.2

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC----ccc
Q psy14043         14 SAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT----AGQ   89 (205)
Q Consensus        14 ~~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~   89 (205)
                      ..+.++|||+|||++|||++|..||.|.+..+++.+|......+|...  .++-.++|||+++|.+||++|+.    +.+
T Consensus       311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~e  388 (459)
T KOG0610|consen  311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAE  388 (459)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHH
Confidence            358999999999999999999999999999999999999988888643  68899999999999999999987    899


Q ss_pred             ccccchhhhcccC
Q psy14043         90 LLQVAWFAEIAIP  102 (205)
Q Consensus        90 ~l~~~~~~~~~~~  102 (205)
                      +.+||||..+.+.
T Consensus       389 IK~HpFF~gVnWa  401 (459)
T KOG0610|consen  389 IKRHPFFEGVNWA  401 (459)
T ss_pred             hhcCccccCCChh
Confidence            9999999988765

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.75  E-value=2.8e-18  Score=132.88  Aligned_cols=95  Identities=29%  Similarity=0.541  Sum_probs=81.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|||++|..||.+.+..+....+..
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~  210 (316)
T cd05620         131 RDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV  210 (316)
T ss_pred             CCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            3678999999975                             26789999999999999999999998888888888776


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~l~~~~~~~~~  100 (205)
                      ..+.++.    .+++++++||.+||..+|++|++. .++++|||+....
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         211 DTPHYPR----WITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence            6555554    589999999999999999999997 5788999997653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0607|consensus

Probab=99.75  E-value=1.3e-18  Score=129.38  Aligned_cols=87  Identities=38%  Similarity=0.672  Sum_probs=78.8

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCC-----------C----HHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhccc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDE-----------S----EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT   79 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~-----------~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~   79 (205)
                      |+.++|.||||||+|-||.|.+||.|.           .    ...++..|+.+.+.+|...|..+|.+++++|..+|.+
T Consensus       268 YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvr  347 (463)
T KOG0607|consen  268 YDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVR  347 (463)
T ss_pred             ccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhc
Confidence            699999999999999999999999753           1    1357888999999999999999999999999999999


Q ss_pred             CcCCCCCcccccccchhhhccc
Q psy14043         80 HADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        80 ~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ++.+|.++.++++|||+.....
T Consensus       348 da~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  348 DAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             cHHhhhhhhhccCCccccccch
Confidence            9999999999999999976543

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.75  E-value=8.8e-18  Score=132.47  Aligned_cols=98  Identities=20%  Similarity=0.301  Sum_probs=75.4

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++|||||||++|+|++|+.||.+.+..+....+...
T Consensus       161 ~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  240 (364)
T cd07875         161 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ  240 (364)
T ss_pred             CCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            3688999999987                            267899999999999999999999887776655554331


Q ss_pred             CCCCC--------------------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         54 DYSFP--------------------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        54 ~~~~~--------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .....                                      .......+.++++||.+||+.||++||++.++++|||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~  320 (364)
T cd07875         241 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY  320 (364)
T ss_pred             cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence            11000                                      0001123568899999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      +...
T Consensus       321 ~~~~  324 (364)
T cd07875         321 INVW  324 (364)
T ss_pred             cccc
Confidence            9654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.75  E-value=4.3e-18  Score=131.83  Aligned_cols=95  Identities=35%  Similarity=0.549  Sum_probs=81.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|||++|+.||.+.+..+....+..
T Consensus       131 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  210 (316)
T cd05592         131 KDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN  210 (316)
T ss_pred             CCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            4678999999987                             26789999999999999999999999888888888776


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~~l~~~~~~~~~  100 (205)
                      ..+.++.    .+++++.+|+.+||..+|++|++. .++++|+|+....
T Consensus       211 ~~~~~~~----~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05592         211 DRPHFPR----WISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID  255 (316)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence            6555443    589999999999999999999986 4888999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.75  E-value=2.1e-18  Score=134.19  Aligned_cols=94  Identities=29%  Similarity=0.585  Sum_probs=82.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|+.||.+.+..+....+..
T Consensus       130 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~  209 (328)
T cd05593         130 KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  209 (328)
T ss_pred             CCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc
Confidence            3678999999976                             27789999999999999999999998888877777776


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~   99 (205)
                      ....+|.    .+++++++||.+||..+|.+|+     ++.++++|+|+...
T Consensus       210 ~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         210 EDIKFPR----TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCccCCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            6665554    5899999999999999999997     89999999999654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.74  E-value=2.8e-18  Score=133.23  Aligned_cols=95  Identities=27%  Similarity=0.554  Sum_probs=82.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|||++|+.||.+.+..+....+..
T Consensus       130 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~  209 (323)
T cd05595         130 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  209 (323)
T ss_pred             CCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            4678999999975                             26789999999999999999999998888888888777


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....+|.    .++++++++|.+||..+|.+|+     ++.++++|+|+....
T Consensus       210 ~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         210 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence            6666554    5899999999999999999998     899999999997643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.74  E-value=6.4e-18  Score=131.76  Aligned_cols=99  Identities=24%  Similarity=0.357  Sum_probs=74.7

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                  +.++||||+||++|+|++|++||.+.+.....
T Consensus       138 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~  217 (338)
T cd07859         138 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL  217 (338)
T ss_pred             CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Confidence            46789999999862                                  55799999999999999999999876654433


Q ss_pred             HHHHhC---------------------------CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVA---------------------------DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~---------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+...                           ............++++.+++.+||+.+|++||++.++++||||....
T Consensus       218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         218 DLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             HHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            222110                           00000111235688999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.74  E-value=3.7e-18  Score=132.51  Aligned_cols=95  Identities=31%  Similarity=0.499  Sum_probs=82.5

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|||||||++|+|++|++||.+.+..+....+..
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  210 (323)
T cd05575         131 SQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN  210 (323)
T ss_pred             CCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            4688999999976                             26789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~----~~~l~~~~~~~~~  100 (205)
                      .....++    .+++.+.++|.+||+.+|.+|+++    .++++|||+....
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~  258 (323)
T cd05575         211 KPLRLKP----NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN  258 (323)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence            6655554    579999999999999999999987    4899999996643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.74  E-value=6.1e-18  Score=132.88  Aligned_cols=96  Identities=30%  Similarity=0.388  Sum_probs=73.9

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH---
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE---   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~---   44 (205)
                      +++.+||+|||++.                                  +.++|||||||++|||++|+.||......   
T Consensus       203 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~  282 (353)
T PLN00034        203 SAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWA  282 (353)
T ss_pred             CCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHH
Confidence            46789999999872                                  23799999999999999999999743322   


Q ss_pred             HHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         45 ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        45 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .....+...   .+......+++++++||.+||..+|++||++.++++|+|+....
T Consensus       283 ~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        283 SLMCAICMS---QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             HHHHHHhcc---CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            222232222   12222346899999999999999999999999999999997754

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.74  E-value=5.7e-18  Score=129.21  Aligned_cols=95  Identities=25%  Similarity=0.377  Sum_probs=74.6

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++||||+||++|+|++|++||.+....+.+..+...
T Consensus       143 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~  222 (288)
T cd07863         143 SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL  222 (288)
T ss_pred             CCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHH
Confidence            4688999999987                            267899999999999999999999887776655555431


Q ss_pred             CC-----CCC------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DY-----SFP------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~-----~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..     .++                  ......++.+++++|.+||+.||++||++.+++.||||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         223 IGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             hCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            10     000                  00113468889999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.73  E-value=6.9e-18  Score=130.19  Aligned_cols=99  Identities=24%  Similarity=0.416  Sum_probs=77.1

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++||||+||++|+|++|++||.+.+..+....+.
T Consensus       139 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  218 (309)
T cd07872         139 ERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIF  218 (309)
T ss_pred             CCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            3578999999987                              2668999999999999999999998877665555443


Q ss_pred             hCCC-------------------CCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 VADY-------------------SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 ~~~~-------------------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....                   .++.       .....+++++++||.+||..+|.+|+++.++++|+|+....
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         219 RLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             HHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            2110                   0110       01124788999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=4.5e-18  Score=132.57  Aligned_cols=99  Identities=26%  Similarity=0.420  Sum_probs=81.2

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .++.+||+|||++                          ++.++||||+||++|||++|.+||.+.+..+....+.....
T Consensus       136 ~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  215 (333)
T cd05600         136 ASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE  215 (333)
T ss_pred             CCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccc
Confidence            4678999999987                          37789999999999999999999998888877777765432


Q ss_pred             CCCCCcC----CCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         56 SFPPEQC----GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....+..    ..+++++++||.+||..+|.+|+++.++++|||+....
T Consensus       216 ~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~  264 (333)
T cd05600         216 TLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD  264 (333)
T ss_pred             cccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence            2211111    25689999999999999999999999999999998653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.73  E-value=1.2e-18  Score=135.39  Aligned_cols=95  Identities=29%  Similarity=0.575  Sum_probs=83.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|..||.+.+..+....+..
T Consensus       131 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~  210 (325)
T cd05594         131 KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  210 (325)
T ss_pred             CCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc
Confidence            4678999999976                             27889999999999999999999998888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++++||.+||+.+|.+|+     ++.++++|+|+....
T Consensus       211 ~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~  259 (325)
T cd05594         211 EEIRFPR----TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV  259 (325)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence            6666654    5899999999999999999997     899999999997643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0594|consensus

Probab=99.73  E-value=1.2e-17  Score=125.57  Aligned_cols=99  Identities=28%  Similarity=0.387  Sum_probs=81.2

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      ++|.+||+|||+|                              |+..+||||+||+++||+++++.|.+.+..+++..|-
T Consensus       155 ~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If  234 (323)
T KOG0594|consen  155 SSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIF  234 (323)
T ss_pred             CCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            3689999999999                              5999999999999999999999999999988888885


Q ss_pred             hCCC------------------CCCCC--------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 VADY------------------SFPPE--------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 ~~~~------------------~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +..-                  .++..        ..++.++++.+++.++|+.+|.+|.++..+++|+||....
T Consensus       235 ~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  235 RLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             HHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            4211                  11110        1123346999999999999999999999999999998764

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.73  E-value=6.8e-18  Score=133.39  Aligned_cols=98  Identities=30%  Similarity=0.434  Sum_probs=81.7

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                  +.++|+||+||++|||++|++||.+.+....+
T Consensus       177 ~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~  256 (370)
T cd05596         177 KSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY  256 (370)
T ss_pred             CCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH
Confidence            46889999999861                                  45799999999999999999999998888888


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~   99 (205)
                      ..+.........+....++.++++||.+||..+|.+  |+++.++++|||+...
T Consensus       257 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         257 SKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            888765433332223358999999999999998987  9999999999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.5e-17  Score=125.05  Aligned_cols=99  Identities=30%  Similarity=0.451  Sum_probs=83.1

Q ss_pred             CCCeEEEEecCCC-------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          2 NGAVLKLIDLGSS-------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      +++.+||+|||++                         ++.++|+||+|+++|+|++|.+||...+..+....+......
T Consensus       132 ~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  211 (260)
T cd05611         132 QTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN  211 (260)
T ss_pred             CCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC
Confidence            3578999999976                         266899999999999999999999988888777777766655


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCc---ccccccchhhhcc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTA---GQLLQVAWFAEIA  100 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~l~~~~~~~~~  100 (205)
                      .+......+++++.++|.+||+.+|++||++   .+++.|||+.+..
T Consensus       212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence            5554445689999999999999999999965   6999999997653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.73  E-value=1.4e-17  Score=129.80  Aligned_cols=99  Identities=21%  Similarity=0.298  Sum_probs=74.7

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++|+||+||++|||++|+.||......+....+....
T Consensus       139 ~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~  218 (331)
T cd06649         139 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPV  218 (331)
T ss_pred             CCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccc
Confidence            3678999999987                           2778999999999999999999998766544433221100


Q ss_pred             C--------------------------------------------CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc
Q psy14043         55 Y--------------------------------------------SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL   90 (205)
Q Consensus        55 ~--------------------------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~   90 (205)
                      .                                            ..+......+++++++||.+||+.+|++||++.++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el  298 (331)
T cd06649         219 VDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML  298 (331)
T ss_pred             cccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH
Confidence            0                                            00111112468899999999999999999999999


Q ss_pred             cccchhhhcc
Q psy14043         91 LQVAWFAEIA  100 (205)
Q Consensus        91 l~~~~~~~~~  100 (205)
                      ++|+|+....
T Consensus       299 l~h~~~~~~~  308 (331)
T cd06649         299 MNHTFIKRSE  308 (331)
T ss_pred             hcChHHhhcc
Confidence            9999997643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.73  E-value=1.1e-17  Score=127.38  Aligned_cols=95  Identities=24%  Similarity=0.379  Sum_probs=73.9

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE----ETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~----~~~~   48 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|+.||......    ....
T Consensus       132 ~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~  211 (280)
T cd05608         132 NDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ  211 (280)
T ss_pred             CCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH
Confidence            3578999999987                             256899999999999999999999765332    2223


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      .+......    ....+++++++++.+||+.+|++|+     ++.++++||||....
T Consensus       212 ~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~  264 (280)
T cd05608         212 RILNDSVT----YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN  264 (280)
T ss_pred             hhcccCCC----CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence            33222222    2236899999999999999999999     678899999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.73  E-value=1.2e-17  Score=128.49  Aligned_cols=99  Identities=24%  Similarity=0.419  Sum_probs=72.1

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i   50 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|.+||.+... .+.+..+
T Consensus       138 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  217 (303)
T cd07869         138 DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI  217 (303)
T ss_pred             CCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence            3678999999976                              25678999999999999999999987533 2333333


Q ss_pred             HhCC--C------------CCCCC--------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         51 SVAD--Y------------SFPPE--------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~--~------------~~~~~--------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....  +            .+.+.              .....++++++|+.+||+.+|.+|+++.++++||||..+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         218 FLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             HHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            2110  0            00000              0012457899999999999999999999999999997653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0612|consensus

Probab=99.72  E-value=8.2e-18  Score=141.96  Aligned_cols=96  Identities=35%  Similarity=0.548  Sum_probs=84.4

Q ss_pred             CCeEEEEecCCC-----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          3 GAVLKLIDLGSS-----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .|+|||+|||.+                                   |+..+|+||+||++|||++|..||...+..+++
T Consensus       211 ~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY  290 (1317)
T KOG0612|consen  211 SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETY  290 (1317)
T ss_pred             cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHH
Confidence            699999999988                                   599999999999999999999999999999999


Q ss_pred             HHHHhC--CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---cccccccchhhhccc
Q psy14043         48 AHISVA--DYSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQLLQVAWFAEIAI  101 (205)
Q Consensus        48 ~~i~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l~~~~~~~~~~  101 (205)
                      .+|.+.  .+.||..  ..+|.++++||.+++. +|+.|..   .+++..||||..+.+
T Consensus       291 ~KIm~hk~~l~FP~~--~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  291 GKIMNHKESLSFPDE--TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHhchhhhcCCCcc--cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            999876  4566622  3599999999999886 4677776   999999999998877

>KOG0582|consensus

Probab=99.72  E-value=9e-18  Score=129.57  Aligned_cols=98  Identities=29%  Similarity=0.388  Sum_probs=82.2

Q ss_pred             CCCeEEEEecCCC-----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~   46 (205)
                      .+|.|||+|||.+                                   |++|+||||||++..||.+|..||....+.+.
T Consensus       161 ~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv  240 (516)
T KOG0582|consen  161 SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV  240 (516)
T ss_pred             CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH
Confidence            4799999999876                                   69999999999999999999999999888776


Q ss_pred             HHHHHhCCCCC------CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         47 RAHISVADYSF------PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        47 ~~~i~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +-.-.++.++.      +......++..++.+|..||++||.+||++.+++.|+||+..
T Consensus       241 Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  241 LLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence            65555555432      222334578899999999999999999999999999999654

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.72  E-value=1.7e-17  Score=128.91  Aligned_cols=95  Identities=33%  Similarity=0.541  Sum_probs=82.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|.+||.+.+..+....+..
T Consensus       136 ~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~  215 (323)
T cd05615         136 SEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME  215 (323)
T ss_pred             CCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            4678999999976                             26789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~  100 (205)
                      ....+|.    .+++++++++.+||+++|.+|++.     .++++|+|+....
T Consensus       216 ~~~~~p~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         216 HNVSYPK----SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID  264 (323)
T ss_pred             CCCCCCc----cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence            7665554    589999999999999999999974     5789999997654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.72  E-value=1.7e-17  Score=127.51  Aligned_cols=98  Identities=24%  Similarity=0.422  Sum_probs=75.9

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++.                              +.++||||+||++|+|++|++||.+.+..+....+.
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~  218 (301)
T cd07873         139 ERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIF  218 (301)
T ss_pred             CCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            36789999999761                              457899999999999999999998877766555443


Q ss_pred             hCCC-------------------CCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VADY-------------------SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~-------------------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ....                   ..+.       .....+++++++||.+||+.+|.+||++.++++|+||...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         219 RILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             HHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            3111                   0110       0112478899999999999999999999999999999654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.72  E-value=1.3e-17  Score=129.57  Aligned_cols=95  Identities=28%  Similarity=0.489  Sum_probs=81.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|++||.+.+..+.+..+..
T Consensus       131 ~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (325)
T cd05602         131 SQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  210 (325)
T ss_pred             CCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            4678999999986                             26789999999999999999999999888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc----cccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG----QLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~----~~l~~~~~~~~~  100 (205)
                      .....++    .+++.++++|.+||+++|.+|+++.    ++++|+|+....
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~  258 (325)
T cd05602         211 KPLQLKP----NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPIN  258 (325)
T ss_pred             CCcCCCC----CCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCC
Confidence            6555443    6899999999999999999999876    788999986543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.72  E-value=4.5e-18  Score=132.51  Aligned_cols=95  Identities=34%  Similarity=0.589  Sum_probs=75.6

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC----CHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE----SEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~----~~~~~   46 (205)
                      +++.+||+|||++.                               +.++||||+||++|||++|+.||...    .....
T Consensus       140 ~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~  219 (332)
T cd05614         140 SEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV  219 (332)
T ss_pred             CCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHH
Confidence            46789999999871                               55799999999999999999999643    23344


Q ss_pred             HHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         47 RAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        47 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ...+......++    ..+++.+++++.+||..+|++|+     ++.++++|||+....
T Consensus       220 ~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~  274 (332)
T cd05614         220 SRRILKCDPPFP----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD  274 (332)
T ss_pred             HHHHhcCCCCCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            445554444444    35899999999999999999999     677999999997643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.72  E-value=1.7e-17  Score=129.76  Aligned_cols=100  Identities=22%  Similarity=0.353  Sum_probs=76.2

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++||||+||++|+|++|+.||.+.+..+.+..+....
T Consensus       153 ~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  232 (343)
T cd07878         153 EDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVV  232 (343)
T ss_pred             CCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence            4688999999987                           2668999999999999999999998776655544443211


Q ss_pred             C-----------------------CCCCC----cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         55 Y-----------------------SFPPE----QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        55 ~-----------------------~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .                       ..+..    .....++.+.+||.+||..+|.+|+++.++++|||+.....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~  306 (343)
T cd07878         233 GTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD  306 (343)
T ss_pred             CCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence            0                       00100    11235678899999999999999999999999999977543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA02988 hypothetical protein; Provisional

Probab=99.71  E-value=2.4e-17  Score=125.77  Aligned_cols=89  Identities=22%  Similarity=0.292  Sum_probs=74.3

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++||||+||++|||++|+.||.+.+..+....+...
T Consensus       158 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~  237 (283)
T PHA02988        158 ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINK  237 (283)
T ss_pred             CCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            4688999999986                            266899999999999999999999988888887777654


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ....+.  ....++.+++|+.+||+.+|++||++.++++
T Consensus       238 ~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        238 NNSLKL--PLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             CCCCCC--CCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            433322  1257899999999999999999999999875

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.71  E-value=2.1e-17  Score=130.76  Aligned_cols=98  Identities=24%  Similarity=0.318  Sum_probs=76.6

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                               ++.++||||+||++|||++|++||.+.+..+.+..+
T Consensus       138 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  217 (372)
T cd07853         138 SNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI  217 (372)
T ss_pred             CCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            3578999999976                               256789999999999999999999888776655554


Q ss_pred             HhC-----------------------CCCCCC-----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVA-----------------------DYSFPP-----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~-----------------------~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...                       ....+.     ......++++.+||.+||+.||.+||++.++++|||+...
T Consensus       218 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         218 TDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            321                       111110     1122468899999999999999999999999999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.71  E-value=1.5e-17  Score=130.95  Aligned_cols=98  Identities=21%  Similarity=0.385  Sum_probs=73.2

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV-   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~-   52 (205)
                      .++.+||+|||++                            ++.++||||+||++|+|++|+.||.+.+.......+.. 
T Consensus       158 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~  237 (359)
T cd07876         158 SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ  237 (359)
T ss_pred             CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            3688999999987                            26789999999999999999999987665433322211 


Q ss_pred             ---------------------CCCCCCC----------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         53 ---------------------ADYSFPP----------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        53 ---------------------~~~~~~~----------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                                           .....+.                ......++++++||.+||+.+|++||++.++++|||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         238 LGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             cCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence                                 1111110                001124678999999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      +...
T Consensus       318 ~~~~  321 (359)
T cd07876         318 ITVW  321 (359)
T ss_pred             hhhh
Confidence            9753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=3.6e-18  Score=132.97  Aligned_cols=95  Identities=32%  Similarity=0.537  Sum_probs=82.6

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++||||+||++|+|++|+.||.+.+..+....+.
T Consensus       131 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~  210 (330)
T cd05586         131 ATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA  210 (330)
T ss_pred             CCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH
Confidence            4678999999986                              2677999999999999999999999988888888888


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC----Ccccccccchhhhc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRP----TAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~----~~~~~l~~~~~~~~   99 (205)
                      .+...++..   .+++++++||.+||..+|.+|+    ++.++++|||+...
T Consensus       211 ~~~~~~~~~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         211 FGKVRFPKN---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             cCCCCCCCc---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            777666643   4789999999999999999998    67899999999764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.71  E-value=3.4e-17  Score=133.78  Aligned_cols=94  Identities=33%  Similarity=0.452  Sum_probs=80.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      .++.+||+|||++                               |+.++||||+||++|||++|+.||.+.+..+.+..+
T Consensus       178 ~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~  257 (496)
T PTZ00283        178 SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT  257 (496)
T ss_pred             CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            3678999999986                               267899999999999999999999998888888877


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+....   ....+++++++++.+||..+|.+||++.++++|||+..
T Consensus       258 ~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        258 LAGRYDP---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             hcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            7655432   22368999999999999999999999999999998753

>KOG0667|consensus

Probab=99.71  E-value=6.3e-18  Score=135.60  Aligned_cols=97  Identities=27%  Similarity=0.328  Sum_probs=77.3

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ...|||+|||.|                          |+.+.||||||||++||.+|.+.|.|.+..+++..|....-.
T Consensus       327 r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~  406 (586)
T KOG0667|consen  327 RSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGL  406 (586)
T ss_pred             cCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCC
Confidence            357999999999                          499999999999999999999999999999988888542110


Q ss_pred             ----------------------------------------------------CCCCc------CC-CCCHHHHHHHHHhc
Q psy14043         57 ----------------------------------------------------FPPEQ------CG-HISVPARELIGQLL   77 (205)
Q Consensus        57 ----------------------------------------------------~~~~~------~~-~~~~~~~~li~~~l   77 (205)
                                                                          .|...      .. .-...+.||+++||
T Consensus       407 Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L  486 (586)
T KOG0667|consen  407 PPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCL  486 (586)
T ss_pred             CCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHh
Confidence                                                                00000      00 11346689999999


Q ss_pred             ccCcCCCCCcccccccchhhhc
Q psy14043         78 NTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        78 ~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..||.+|+++.+.++|||+...
T Consensus       487 ~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  487 EWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             ccCchhcCCHHHHhcCcccccc
Confidence            9999999999999999999753

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.7e-17  Score=126.65  Aligned_cols=99  Identities=26%  Similarity=0.373  Sum_probs=75.5

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++|+||+||++|+|++|..||.+.........+...
T Consensus       137 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~  216 (285)
T cd05605         137 DYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR  216 (285)
T ss_pred             CCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH
Confidence            4578999999977                            256799999999999999999999876554333333221


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....+......+++.+++||.+||..+|.+|+     ++.++++|+|+....
T Consensus       217 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05605         217 VKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN  268 (285)
T ss_pred             hhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence            11111222235899999999999999999999     888999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.71  E-value=3.3e-17  Score=126.35  Aligned_cols=102  Identities=27%  Similarity=0.380  Sum_probs=80.4

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++|+||+||++|+|++|++||.+.+..+.+..+.
T Consensus       143 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~  222 (309)
T cd07845         143 DKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII  222 (309)
T ss_pred             CCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4678999999977                              2678999999999999999999999888877777665


Q ss_pred             hCCC-------------------CCCCC-------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         52 VADY-------------------SFPPE-------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        52 ~~~~-------------------~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ....                   ..+..       .....++.+.+||.+||+.||++||++.++++|+||+....++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~  300 (309)
T cd07845         223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPC  300 (309)
T ss_pred             HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCC
Confidence            4211                   11100       0123588999999999999999999999999999998665443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.71  E-value=1.8e-17  Score=128.24  Aligned_cols=94  Identities=23%  Similarity=0.314  Sum_probs=66.8

Q ss_pred             CCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH------
Q psy14043          3 GAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE------   43 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~------   43 (205)
                      ++.+||+|||++                                 ++.++||||+||++|+|++|++||.+...      
T Consensus       148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~  227 (317)
T cd07868         148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN  227 (317)
T ss_pred             cCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccc
Confidence            468999999977                                 26679999999999999999999964321      


Q ss_pred             ---HHHHHHHHhCCC-C----------CC-----------------------CCcCCCCCHHHHHHHHHhcccCcCCCCC
Q psy14043         44 ---EETRAHISVADY-S----------FP-----------------------PEQCGHISVPARELIGQLLNTHADKRPT   86 (205)
Q Consensus        44 ---~~~~~~i~~~~~-~----------~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~   86 (205)
                         ...+..+..... +          .+                       .......+.++.+||.+||+.||.+|++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t  307 (317)
T cd07868         228 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT  307 (317)
T ss_pred             cccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCC
Confidence               112222211000 0          00                       0000123567899999999999999999


Q ss_pred             cccccccchh
Q psy14043         87 AGQLLQVAWF   96 (205)
Q Consensus        87 ~~~~l~~~~~   96 (205)
                      +.++++||||
T Consensus       308 ~~e~l~hp~f  317 (317)
T cd07868         308 SEQAMQDPYF  317 (317)
T ss_pred             HHHHhcCCCC
Confidence            9999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.71  E-value=1.9e-17  Score=128.41  Aligned_cols=94  Identities=26%  Similarity=0.442  Sum_probs=80.9

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++|.+||+|||++                             ++.++||||+||++|||++|.+||.+.+..+....+..
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (321)
T cd05603         131 SQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH  210 (321)
T ss_pred             CCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence            4688999999976                             26789999999999999999999999888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc----cccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG----QLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~----~~l~~~~~~~~   99 (205)
                      ....++.    ..+.++.++|.+||+++|.+|++..    ++++|+|+...
T Consensus       211 ~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         211 KPLQLPG----GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            6655554    5789999999999999999999764    88999998654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.71  E-value=3.3e-17  Score=128.80  Aligned_cols=98  Identities=20%  Similarity=0.325  Sum_probs=73.5

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++                            ++.++|+||+||++|+|++|+.||.+.+..+....+...
T Consensus       154 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~  233 (355)
T cd07874         154 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ  233 (355)
T ss_pred             CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            3688999999988                            277899999999999999999999887654443322211


Q ss_pred             C----------------------CC-----CC-----------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         54 D----------------------YS-----FP-----------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        54 ~----------------------~~-----~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .                      ..     ++           .......+.++++||.+||+.+|++||++.++++|||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~  313 (355)
T cd07874         234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY  313 (355)
T ss_pred             hCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence            0                      00     00           0011124578899999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      +...
T Consensus       314 ~~~~  317 (355)
T cd07874         314 INVW  317 (355)
T ss_pred             hhcc
Confidence            9654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.71  E-value=1.5e-17  Score=131.98  Aligned_cols=85  Identities=28%  Similarity=0.417  Sum_probs=68.7

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---cccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l~   92 (205)
                      +.++||||+||++|||++|++||.+.+..+....+.........+....+++++.++|.+++ .+|.+|++   +.++++
T Consensus       226 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         226 TQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             CCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            67899999999999999999999988887777776654433333333468999999999976 59999987   899999


Q ss_pred             cchhhhccc
Q psy14043         93 VAWFAEIAI  101 (205)
Q Consensus        93 ~~~~~~~~~  101 (205)
                      |||+..+..
T Consensus       305 hp~f~~~~~  313 (382)
T cd05625         305 HPFFKTIDF  313 (382)
T ss_pred             CCCcCCcCh
Confidence            999977543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.71  E-value=5.5e-18  Score=131.29  Aligned_cols=95  Identities=31%  Similarity=0.524  Sum_probs=82.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|||++|+.||.+.+..+....+..
T Consensus       133 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~  212 (318)
T cd05582         133 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK  212 (318)
T ss_pred             CCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc
Confidence            4678999999987                             26789999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~  100 (205)
                      ....+|.    .++++++++|.+||+.+|++|+++     .+++.|+|+....
T Consensus       213 ~~~~~p~----~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~  261 (318)
T cd05582         213 AKLGMPQ----FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID  261 (318)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence            7666554    589999999999999999999994     5599999997653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.71  E-value=1.5e-17  Score=129.24  Aligned_cols=94  Identities=24%  Similarity=0.444  Sum_probs=81.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|++||.+.+..+....+..
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~  210 (325)
T cd05604         131 SQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH  210 (325)
T ss_pred             CCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence            4688999999986                             26789999999999999999999999888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc----cccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG----QLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~----~~l~~~~~~~~   99 (205)
                      .....++    ..+..+.++|.+||+++|.+|++..    +++.|||+...
T Consensus       211 ~~~~~~~----~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         211 KPLVLRP----GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             CCccCCC----CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            6555443    5789999999999999999999874    79999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.71  E-value=4.8e-17  Score=128.30  Aligned_cols=82  Identities=30%  Similarity=0.510  Sum_probs=65.9

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCCCcCCCCCHHHHHHHHHhcccCcC---CCCCcccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD--YSFPPEQCGHISVPARELIGQLLNTHAD---KRPTAGQL   90 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~---~R~~~~~~   90 (205)
                      +.++||||+||++|||++|++||.+.+..+.+..+....  ..+|+.  ..++++++++|.+++. +|.   .|+++.++
T Consensus       214 ~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei  290 (363)
T cd05628         214 NKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPE--VPISEKAKDLILRFCC-EWEHRIGAPGVEEI  290 (363)
T ss_pred             CCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCc--CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence            667999999999999999999999988888888887643  333332  2478999999999775 444   45789999


Q ss_pred             cccchhhhcc
Q psy14043         91 LQVAWFAEIA  100 (205)
Q Consensus        91 l~~~~~~~~~  100 (205)
                      ++||||....
T Consensus       291 ~~hp~f~~~~  300 (363)
T cd05628         291 KTNPFFEGVD  300 (363)
T ss_pred             hCCCCCCCCC
Confidence            9999997654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=4.6e-17  Score=129.50  Aligned_cols=101  Identities=25%  Similarity=0.416  Sum_probs=71.6

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC-------HH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES-------EE   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~-------~~   44 (205)
                      +++.+||+|||+|                              |+.++||||+||++|||++|+.||....       ..
T Consensus       217 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~  296 (391)
T PHA03212        217 HPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSD  296 (391)
T ss_pred             CCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchh
Confidence            3578999999987                              2778999999999999999998875421       11


Q ss_pred             HHHHHHHhCC--------------------------CCCCC--C---cCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         45 ETRAHISVAD--------------------------YSFPP--E---QCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        45 ~~~~~i~~~~--------------------------~~~~~--~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+..+....                          ...+.  .   ....++.++++||.+||+.+|.+||++.++++|
T Consensus       297 ~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h  376 (391)
T PHA03212        297 RQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF  376 (391)
T ss_pred             HHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            1222221110                          00000  0   011356789999999999999999999999999


Q ss_pred             chhhhcccC
Q psy14043         94 AWFAEIAIP  102 (205)
Q Consensus        94 ~~~~~~~~~  102 (205)
                      |||..+..+
T Consensus       377 p~f~~~~~~  385 (391)
T PHA03212        377 AAFQDIPDP  385 (391)
T ss_pred             hhhccCCCC
Confidence            999876543

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.70  E-value=3e-17  Score=130.24  Aligned_cols=86  Identities=26%  Similarity=0.389  Sum_probs=66.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhccc--CcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT--HADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~--~p~~R~~~~~~l~~   93 (205)
                      +.++||||+||++|||++|.+||...+..+....+.........+....+++++++||.+++..  ++.+|+++.+++.|
T Consensus       226 ~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         226 TQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             CCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            6789999999999999999999988877766666654332222222335899999999996654  44459999999999


Q ss_pred             chhhhccc
Q psy14043         94 AWFAEIAI  101 (205)
Q Consensus        94 ~~~~~~~~  101 (205)
                      |||.....
T Consensus       306 p~f~~~~~  313 (381)
T cd05626         306 PFFSEVDF  313 (381)
T ss_pred             cccCCCCh
Confidence            99976543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4279|consensus

Probab=99.70  E-value=4.7e-18  Score=137.74  Aligned_cols=96  Identities=28%  Similarity=0.490  Sum_probs=78.9

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .|++||.|||.+                               |+.++|||||||+..||.||+|||...... ...+..
T Consensus       712 SGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp-qAAMFk  790 (1226)
T KOG4279|consen  712 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP-QAAMFK  790 (1226)
T ss_pred             cceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh-hHhhhh
Confidence            589999999998                               599999999999999999999999754322 223333


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      -+-+...++.+..++.+++.||.+|+..+|..||++.++++.||++.-
T Consensus       791 VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  791 VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            344444455556799999999999999999999999999999999654

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.70  E-value=8.4e-18  Score=130.88  Aligned_cols=98  Identities=30%  Similarity=0.400  Sum_probs=79.8

Q ss_pred             CCCeEEEEecCCCC------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEE   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~   45 (205)
                      .++.+||+|||++.                                    +.++||||+||++|+|++|+.||...+...
T Consensus       137 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~  216 (330)
T cd05601         137 RTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK  216 (330)
T ss_pred             CCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH
Confidence            35789999999872                                    257899999999999999999999888877


Q ss_pred             HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         46 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        46 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+..+.........+....+++++++||.+||. +|.+|+++.+++.|||+....
T Consensus       217 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~  270 (330)
T cd05601         217 TYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKID  270 (330)
T ss_pred             HHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCC
Confidence            777776543222222223589999999999998 999999999999999997654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.70  E-value=2.6e-17  Score=128.18  Aligned_cols=95  Identities=28%  Similarity=0.434  Sum_probs=75.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC---------CH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE---------SE   43 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~---------~~   43 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|+.||...         ..
T Consensus       131 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~  210 (329)
T cd05588         131 AEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTE  210 (329)
T ss_pred             CCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccch
Confidence            4678999999976                             267899999999999999999999521         11


Q ss_pred             HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC------cccccccchhhhcc
Q psy14043         44 EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT------AGQLLQVAWFAEIA  100 (205)
Q Consensus        44 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~------~~~~l~~~~~~~~~  100 (205)
                      ......+......+|.    .+++++.++|.+||+.+|.+|++      +.++++|||+....
T Consensus       211 ~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~  269 (329)
T cd05588         211 DYLFQVILEKQIRIPR----SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNID  269 (329)
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence            2244455555555553    58999999999999999999997      57999999996643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.70  E-value=2.4e-17  Score=128.32  Aligned_cols=95  Identities=27%  Similarity=0.450  Sum_probs=75.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC---------CH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE---------SE   43 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~---------~~   43 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|+.||...         ..
T Consensus       131 ~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~  210 (329)
T cd05618         131 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE  210 (329)
T ss_pred             CCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccH
Confidence            4678999999976                             267899999999999999999999521         12


Q ss_pred             HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc------ccccccchhhhcc
Q psy14043         44 EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA------GQLLQVAWFAEIA  100 (205)
Q Consensus        44 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------~~~l~~~~~~~~~  100 (205)
                      ......+......+|.    .++.+++++|.+||..+|.+|+++      .++++||||....
T Consensus       211 ~~~~~~i~~~~~~~p~----~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  269 (329)
T cd05618         211 DYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  269 (329)
T ss_pred             HHHHHHHhcCCCCCCC----CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence            2244455555555554    589999999999999999999985      6999999997653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.70  E-value=6.8e-17  Score=123.18  Aligned_cols=98  Identities=29%  Similarity=0.458  Sum_probs=75.8

Q ss_pred             CCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++.                                 +.++|+||+||++|+|++|+.||...........
T Consensus       139 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  218 (286)
T cd06622         139 NGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ  218 (286)
T ss_pred             CCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH
Confidence            5789999999762                                 4578999999999999999999976555444433


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +.......+...+..+++++++||.+||..+|++||++.+++.|+|+....
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         219 LSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             HHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            332211122223345899999999999999999999999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=3.1e-17  Score=129.37  Aligned_cols=84  Identities=26%  Similarity=0.430  Sum_probs=69.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---cccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l~   92 (205)
                      +.++||||+||++|||++|.+||.+.+..+....+......+..+....+++++++||.+||. +|.+|++   +.++++
T Consensus       217 ~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         217 NKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            567999999999999999999999888888777776654333322223579999999999996 8999997   999999


Q ss_pred             cchhhhcc
Q psy14043         93 VAWFAEIA  100 (205)
Q Consensus        93 ~~~~~~~~  100 (205)
                      |||+....
T Consensus       296 h~~~~~~~  303 (364)
T cd05599         296 HPFFKGVD  303 (364)
T ss_pred             CCCcCCCC
Confidence            99997653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.70  E-value=5.8e-17  Score=123.19  Aligned_cols=96  Identities=20%  Similarity=0.377  Sum_probs=73.8

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~----~~~~~~   49 (205)
                      +++.+||+|||++                            ++.++|+||+||++|||++|+.||.....    .+....
T Consensus       130 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~  209 (277)
T cd05607         130 DQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR  209 (277)
T ss_pred             CCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH
Confidence            3578999999987                            27789999999999999999999975432    233333


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc----ccccccchhhhcc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA----GQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~----~~~l~~~~~~~~~  100 (205)
                      +.......+.   ..+++++++++.+||+++|++|+++    .+++.|+||..+.
T Consensus       210 ~~~~~~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~  261 (277)
T cd05607         210 TLEDEVKFEH---QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN  261 (277)
T ss_pred             hhcccccccc---ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence            3333332222   3589999999999999999999999    5677999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.70  E-value=8.2e-17  Score=120.77  Aligned_cols=92  Identities=22%  Similarity=0.338  Sum_probs=77.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|+.||...+.......+..
T Consensus       137 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~  216 (257)
T cd08223         137 RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE  216 (257)
T ss_pred             cCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            3578999999977                             15689999999999999999999988777776666665


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +....   ....+++.+.+++.+||+.+|++||++.++++|||+
T Consensus       217 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         217 GKLPP---MPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             cCCCC---CccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            54422   223689999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.70  E-value=7.1e-17  Score=122.13  Aligned_cols=93  Identities=27%  Similarity=0.397  Sum_probs=73.4

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                  +.++|+||+||++|||++|+.||.........
T Consensus       146 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~  225 (272)
T cd06637         146 ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL  225 (272)
T ss_pred             CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH
Confidence            45789999999872                                  34699999999999999999999766555444


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..+.....  +......++.++++|+.+||..+|.+||++.+++.||||
T Consensus       226 ~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         226 FLIPRNPA--PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHhcCCC--CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            44433222  112223578999999999999999999999999999996

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0272|consensus

Probab=99.69  E-value=5.3e-17  Score=123.49  Aligned_cols=104  Identities=19%  Similarity=0.279  Sum_probs=89.9

Q ss_pred             cccCcCCCCCcccccccchh---------hhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhc
Q psy14043         77 LNTHADKRPTAGQLLQVAWF---------AEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAAN  147 (205)
Q Consensus        77 l~~~p~~R~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~  147 (205)
                      ..++|+.+.-......+.|-         .-....|...+.+++|+++|..+++||.|..-++||+.++.          
T Consensus       267 VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr----------  336 (459)
T KOG0272|consen  267 VAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGR----------  336 (459)
T ss_pred             eeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCc----------
Confidence            45778888766666666664         12345788899999999999999999999999999999998          


Q ss_pred             ccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        148 VNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       148 ~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                          ..-.|.||...|.+|+|||+|+.|||||.|++++|||++....
T Consensus       337 ----~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~  379 (459)
T KOG0272|consen  337 ----CIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE  379 (459)
T ss_pred             ----EEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccccc
Confidence                5678899999999999999999999999999999999988664

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.69  E-value=7.8e-17  Score=125.83  Aligned_cols=105  Identities=23%  Similarity=0.294  Sum_probs=78.2

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.+||+|||++.                              +.++|+||+||++|+|++|++||.+.+.......+..
T Consensus       144 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  223 (337)
T cd07858         144 NCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE  223 (337)
T ss_pred             CCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence            5789999999762                              5689999999999999999999987665443333321


Q ss_pred             CC-----------------------CCCC----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCCc
Q psy14043         53 AD-----------------------YSFP----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT  105 (205)
Q Consensus        53 ~~-----------------------~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~  105 (205)
                      ..                       ...+    ......+++++++||.+||+.+|++||++.++++|||+.....+...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~  303 (337)
T cd07858         224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE  303 (337)
T ss_pred             HhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence            10                       0000    01123578999999999999999999999999999999876555444


Q ss_pred             cc
Q psy14043        106 KV  107 (205)
Q Consensus       106 ~~  107 (205)
                      .+
T Consensus       304 ~~  305 (337)
T cd07858         304 PV  305 (337)
T ss_pred             cc
Confidence            33

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0986|consensus

Probab=99.69  E-value=2.3e-17  Score=127.69  Aligned_cols=97  Identities=27%  Similarity=0.416  Sum_probs=80.9

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE----SEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~----~~~~~~~~   49 (205)
                      +.|+++|+|.|+|                            |++.+|+|||||++|||+.|+.||...    ..+++-++
T Consensus       322 d~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr  401 (591)
T KOG0986|consen  322 DHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR  401 (591)
T ss_pred             cCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH
Confidence            4699999999999                            699999999999999999999999754    33455566


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcccC
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIAIP  102 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~~~  102 (205)
                      +......++    ..+|+++++++..+|++||++|+.     +.++.+||+|+.+.+.
T Consensus       402 ~~~~~~ey~----~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~  455 (591)
T KOG0986|consen  402 TLEDPEEYS----DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR  455 (591)
T ss_pred             Hhcchhhcc----cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence            665555555    379999999999999999999974     5689999999876543

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=3.3e-17  Score=129.82  Aligned_cols=83  Identities=30%  Similarity=0.460  Sum_probs=66.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCC---CCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKR---PTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R---~~~~~~l~   92 (205)
                      +.++||||+||++|||++|.+||.+.+..+.+..+......+..+....+++++++||.+||. +|.+|   +++.++++
T Consensus       226 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~  304 (377)
T cd05629         226 GQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS  304 (377)
T ss_pred             CCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence            677999999999999999999999888877777776543332222223578999999999997 77765   59999999


Q ss_pred             cchhhhc
Q psy14043         93 VAWFAEI   99 (205)
Q Consensus        93 ~~~~~~~   99 (205)
                      |||+...
T Consensus       305 hp~~~~~  311 (377)
T cd05629         305 HPFFRGV  311 (377)
T ss_pred             CCCcCCC
Confidence            9999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.69  E-value=2.1e-17  Score=130.83  Aligned_cols=84  Identities=29%  Similarity=0.441  Sum_probs=68.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC---Ccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP---TAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~l~   92 (205)
                      +.++||||+||++|||++|+.||.+.+..+....+..............+++++.++|.+|+ .+|.+|+   ++.++++
T Consensus       222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            56799999999999999999999988877776666654433333333468999999999976 5999999   8999999


Q ss_pred             cchhhhcc
Q psy14043         93 VAWFAEIA  100 (205)
Q Consensus        93 ~~~~~~~~  100 (205)
                      |||+..+.
T Consensus       301 h~~~~~~~  308 (376)
T cd05598         301 HPFFKGID  308 (376)
T ss_pred             CCCcCCCC
Confidence            99997643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.69  E-value=5.7e-17  Score=126.10  Aligned_cols=95  Identities=28%  Similarity=0.443  Sum_probs=75.5

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-------CHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-------SEEE   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-------~~~~   45 (205)
                      +++.+||+|||++                             ++.++||||+||++|+|++|..||...       ....
T Consensus       131 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~  210 (327)
T cd05617         131 ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDY  210 (327)
T ss_pred             CCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHH
Confidence            4678999999976                             267899999999999999999999532       2233


Q ss_pred             HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc------ccccccchhhhcc
Q psy14043         46 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA------GQLLQVAWFAEIA  100 (205)
Q Consensus        46 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------~~~l~~~~~~~~~  100 (205)
                      ....+......+|.    .++..+.+++.+||..+|.+|+++      .+++.|+||..+.
T Consensus       211 ~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         211 LFQVILEKPIRIPR----FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             HHHHHHhCCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence            44455554444443    589999999999999999999985      5899999997754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.2e-16  Score=120.30  Aligned_cols=93  Identities=27%  Similarity=0.454  Sum_probs=75.4

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                                +.++|+||+||++|+|++|+.||...+.......
T Consensus       139 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  218 (263)
T cd06625         139 SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK  218 (263)
T ss_pred             CCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH
Confidence            35789999999762                                4679999999999999999999987766655555


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +......  ......++..+.++|.+||..+|++||++.++++|+|+
T Consensus       219 ~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         219 IATQPTN--PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HhccCCC--CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            4443222  22234689999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.69  E-value=1.1e-16  Score=130.58  Aligned_cols=93  Identities=33%  Similarity=0.493  Sum_probs=80.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                               ++.++||||+||++|+|++|+.||.+.+..+.+..+
T Consensus       204 ~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~  283 (478)
T PTZ00267        204 PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV  283 (478)
T ss_pred             CCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            3678999999987                               267899999999999999999999988888888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      ..+.....   +..++++++++|.+||..+|++||++.+++.++|+.
T Consensus       284 ~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        284 LYGKYDPF---PCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             HhCCCCCC---CccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence            76654322   135889999999999999999999999999999885

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=7.3e-17  Score=121.99  Aligned_cols=94  Identities=24%  Similarity=0.348  Sum_probs=74.1

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++                                  ++.++||||+||++|+|++|++||.........
T Consensus       148 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  227 (275)
T cd06608         148 KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL  227 (275)
T ss_pred             cCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH
Confidence            3678999999976                                  145699999999999999999999876655555


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..+........ .....++.++++||.+||..+|++||++.++++|||+
T Consensus       228 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         228 FKIPRNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHhhccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            55554432211 1122478899999999999999999999999999995

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.69  E-value=1.3e-16  Score=124.81  Aligned_cols=98  Identities=21%  Similarity=0.287  Sum_probs=71.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC-------------------------CC-CCcCCCCCHHH
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS-------------------------FP-PEQCGHISVPA   69 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~-------------------------~~-~~~~~~~~~~~   69 (205)
                      +.++|+||+||++|+|++|..||.+.+..+....+....+.                         .+ ......++.++
T Consensus       197 ~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (342)
T cd07854         197 TKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEA  276 (342)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHH
Confidence            56799999999999999999999877665544443321110                         00 00112578899


Q ss_pred             HHHHHHhcccCcCCCCCcccccccchhhhcccCCCccccccccc
Q psy14043         70 RELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWH  113 (205)
Q Consensus        70 ~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  113 (205)
                      ++||.+||+.+|.+||++.+++.|+|++....+...++....++
T Consensus       277 ~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~~~~~~~  320 (342)
T cd07854         277 LDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVSLHPFH  320 (342)
T ss_pred             HHHHHHHhCCCchhccCHHHHhCCCccccccCCccccCCCCCcc
Confidence            99999999999999999999999999987655555555544444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.69  E-value=6.4e-17  Score=127.89  Aligned_cols=98  Identities=30%  Similarity=0.437  Sum_probs=79.2

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++                                  ++.++||||+||++|||++|.+||.+.+....+
T Consensus       177 ~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~  256 (371)
T cd05622         177 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY  256 (371)
T ss_pred             CCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHH
Confidence            4688999999987                                  145899999999999999999999998888888


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~   99 (205)
                      ..|.......+.+....+++.++++|.+||..++.+  |+++.++++|+|+...
T Consensus       257 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         257 SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            888765443333333468999999999999844433  6789999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.69  E-value=1.2e-16  Score=122.39  Aligned_cols=95  Identities=25%  Similarity=0.379  Sum_probs=73.8

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.+||+|||++                              ++.++|+||+||++|+|++|.+||.+.+..+....+..
T Consensus       147 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~  226 (295)
T cd07837         147 KGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFK  226 (295)
T ss_pred             CCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            688999999965                              15679999999999999999999988766655544432


Q ss_pred             CCCC-----------------CC-------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         53 ADYS-----------------FP-------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        53 ~~~~-----------------~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      ....                 .+       ......+++++.+||.+||..+|.+||++.+++.|||+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         227 LLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            1100                 00       001134789999999999999999999999999999973

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.68  E-value=1.1e-16  Score=122.24  Aligned_cols=99  Identities=24%  Similarity=0.420  Sum_probs=76.8

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++|+||+||++|+|++|..||.+.........+...
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~  216 (285)
T cd05632         137 DYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR  216 (285)
T ss_pred             CCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            3578999999977                            266789999999999999999999876655444444332


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      ...........+++++.+|+.+||+.+|++|++     +.+++.|+|+....
T Consensus       217 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         217 VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             hhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence            222222223468899999999999999999999     77999999997753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.1e-16  Score=121.25  Aligned_cols=96  Identities=25%  Similarity=0.374  Sum_probs=77.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.++|+|||++                             ++.++|+||+||++|+|++|++||...+.......+..
T Consensus       133 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  212 (274)
T cd06609         133 EEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK  212 (274)
T ss_pred             CCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh
Confidence            3578999999977                             26789999999999999999999987766665555554


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...+...  ...+++++.+++.+||..+|++||++.++++|+|+...
T Consensus       213 ~~~~~~~--~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         213 NNPPSLE--GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             cCCCCCc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence            4322211  11278999999999999999999999999999999664

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.68  E-value=1.4e-16  Score=122.34  Aligned_cols=97  Identities=26%  Similarity=0.442  Sum_probs=78.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|+.||.+.+.......+..
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~  229 (296)
T cd06655         150 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  229 (296)
T ss_pred             CCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            3678999999975                             15679999999999999999999988777665555544


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .... +...+..+++.++++|.+||..+|++||++.+++.|+|+...
T Consensus       230 ~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         230 NGTP-ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             cCCc-ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence            3221 112234689999999999999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.68  E-value=7.8e-17  Score=124.61  Aligned_cols=94  Identities=23%  Similarity=0.339  Sum_probs=66.2

Q ss_pred             CCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-----
Q psy14043          3 GAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-----   44 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-----   44 (205)
                      ++.+||+|||++                                 ++.++||||+||++|||++|++||......     
T Consensus       148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~  227 (317)
T cd07867         148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN  227 (317)
T ss_pred             CCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccc
Confidence            468999999987                                 166799999999999999999999643211     


Q ss_pred             ----HHHHHHHhCC--------------CCCC--------------------CCcCCCCCHHHHHHHHHhcccCcCCCCC
Q psy14043         45 ----ETRAHISVAD--------------YSFP--------------------PEQCGHISVPARELIGQLLNTHADKRPT   86 (205)
Q Consensus        45 ----~~~~~i~~~~--------------~~~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~   86 (205)
                          .....+....              ..++                    .......+..+++|+.+||+.||.+||+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t  307 (317)
T cd07867         228 PFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRIT  307 (317)
T ss_pred             cccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccC
Confidence                1111111000              0000                    0001124567889999999999999999


Q ss_pred             cccccccchh
Q psy14043         87 AGQLLQVAWF   96 (205)
Q Consensus        87 ~~~~l~~~~~   96 (205)
                      +.++++||||
T Consensus       308 ~~e~l~hp~f  317 (317)
T cd07867         308 SEQALQDPYF  317 (317)
T ss_pred             HHHHhcCCCC
Confidence            9999999996

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.68  E-value=5.4e-17  Score=128.27  Aligned_cols=98  Identities=30%  Similarity=0.418  Sum_probs=78.9

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                  +.++|+||+||++|+|++|++||.+.+....+
T Consensus       177 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~  256 (370)
T cd05621         177 KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY  256 (370)
T ss_pred             CCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHH
Confidence            46889999999872                                  35799999999999999999999988888888


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~   99 (205)
                      ..+......+..+....+++.+++++.++|..++.+  |+++.++++|||+...
T Consensus       257 ~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         257 SKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            888764433322222357999999999999855543  8899999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.68  E-value=9.6e-17  Score=122.20  Aligned_cols=95  Identities=24%  Similarity=0.379  Sum_probs=72.0

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++|+||+||++|+|++|++||.+.+.......+.
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~  215 (285)
T cd07861         136 NKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIF  215 (285)
T ss_pred             CCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            4688999999965                              1567999999999999999999998776544333322


Q ss_pred             hCCC------------------CCC-------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADY------------------SFP-------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~------------------~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ....                  ..+       ......++++++++|.+||..+|.+||++.+++.|+||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         216 RILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            1100                  000       01123478999999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=4.8e-17  Score=127.54  Aligned_cols=83  Identities=34%  Similarity=0.543  Sum_probs=69.1

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-cccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV--ADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-AGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~~l~   92 (205)
                      +.++|||||||++|||++|+.||.+.+..+....+..  ....+|.  ...+++++++||.+||. +|.+|++ +.++++
T Consensus       208 ~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         208 GLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP--DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             CCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC--CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence            5689999999999999999999998888777777776  2333332  22479999999999997 9999999 999999


Q ss_pred             cchhhhccc
Q psy14043         93 VAWFAEIAI  101 (205)
Q Consensus        93 ~~~~~~~~~  101 (205)
                      |||+.....
T Consensus       285 hp~~~~~~~  293 (350)
T cd05573         285 HPFFKGIDW  293 (350)
T ss_pred             CCCcCCCCH
Confidence            999976543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.68  E-value=1.1e-16  Score=121.84  Aligned_cols=97  Identities=25%  Similarity=0.281  Sum_probs=78.1

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++.                                  +.++|+||+||++|+|++|++||...+..+..
T Consensus       138 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~  217 (282)
T cd06643         138 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVL  217 (282)
T ss_pred             cCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHH
Confidence            36789999999771                                  34799999999999999999999887776666


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+........ .....++.++++||.+||..+|++||++.++++|||+...
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         218 LKIAKSEPPTL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHhhcCCCCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            66654433211 1223578999999999999999999999999999998653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.68  E-value=1.8e-16  Score=121.26  Aligned_cols=98  Identities=26%  Similarity=0.400  Sum_probs=77.4

Q ss_pred             CCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          3 GAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         3 ~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      ++.+||+|||++.                                  +.++|+||+||++|+|++|.+||...+..+...
T Consensus       146 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  225 (292)
T cd06644         146 DGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL  225 (292)
T ss_pred             CCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH
Confidence            6789999999761                                  336899999999999999999998776665555


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .+...... .......++.++.++|.+||..+|++||++.++++|||+..+..
T Consensus       226 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         226 KIAKSEPP-TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             HHhcCCCc-cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence            55443321 11122357899999999999999999999999999999876543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.68  E-value=1.1e-16  Score=121.72  Aligned_cols=93  Identities=33%  Similarity=0.552  Sum_probs=72.8

Q ss_pred             CeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          4 AVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         4 ~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +.+||+|||.+.                             +.++|+||+||++|||++|++||.+.+..+....+....
T Consensus       136 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~  215 (282)
T cd07831         136 DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVL  215 (282)
T ss_pred             CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHc
Confidence            789999999771                             668999999999999999999998877665544443211


Q ss_pred             ------------------CCCCCC-------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         55 ------------------YSFPPE-------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        55 ------------------~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                                        ..++..       ....++..++++|.+||.++|++||++.++++||||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         216 GTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                              111110       012468999999999999999999999999999996

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.68  E-value=9.8e-17  Score=122.43  Aligned_cols=98  Identities=23%  Similarity=0.361  Sum_probs=74.2

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|+||+||++|+|++|++||..... .+....+
T Consensus       144 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  223 (288)
T cd06616         144 NGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV  223 (288)
T ss_pred             CCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh
Confidence            578999999976                               13479999999999999999999976542 1222222


Q ss_pred             HhCC-CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         51 SVAD-YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .... +..+......++.++.+|+.+||+.+|++||++.+++.|+|++...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         224 VKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             cCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence            2222 2223222335889999999999999999999999999999997643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0271|consensus

Probab=99.68  E-value=1e-16  Score=120.93  Aligned_cols=85  Identities=19%  Similarity=0.307  Sum_probs=77.1

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+-+++|+|++..+++|+-|.++++||+++..              ...+.+||...|.|++|||||+.||||+-
T Consensus       112 ~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT--------------p~~t~KgH~~WVlcvawsPDgk~iASG~~  177 (480)
T KOG0271|consen  112 AGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET--------------PLFTCKGHKNWVLCVAWSPDGKKIASGSK  177 (480)
T ss_pred             CCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC--------------cceeecCCccEEEEEEECCCcchhhcccc
Confidence            4677789999999999999999999999999999887              55789999999999999999999999999


Q ss_pred             CCcEEEEeecCCCCCCCcC
Q psy14043        181 TGLIIVWMLYKEKNPQDKL  199 (205)
Q Consensus       181 d~~i~~wd~~~~~~~~~~~  199 (205)
                      ||+|++||..++...-++|
T Consensus       178 dg~I~lwdpktg~~~g~~l  196 (480)
T KOG0271|consen  178 DGSIRLWDPKTGQQIGRAL  196 (480)
T ss_pred             CCeEEEecCCCCCcccccc
Confidence            9999999999987654444

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.68  E-value=1.3e-16  Score=121.38  Aligned_cols=93  Identities=27%  Similarity=0.360  Sum_probs=73.2

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                  +.++|+||+||++|+|++|.+||......+..
T Consensus       156 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~  235 (282)
T cd06636         156 ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL  235 (282)
T ss_pred             CCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh
Confidence            35779999999861                                  33689999999999999999999776555444


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..+.....  +......++.++.+||.+||..+|.+||++.++++|||+
T Consensus       236 ~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         236 FLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             hhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            44433222  212223588999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.68  E-value=1.2e-16  Score=120.80  Aligned_cols=92  Identities=24%  Similarity=0.390  Sum_probs=70.0

Q ss_pred             eEEEEecCCC-------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhCCCCCC
Q psy14043          5 VLKLIDLGSS-------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADYSFP   58 (205)
Q Consensus         5 ~~kl~Dfg~~-------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~   58 (205)
                      .++|+|||++                         ++.++|+||+||++|+|++|+.||........ ...+.... ..+
T Consensus       148 ~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~  226 (267)
T PHA03390        148 RIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK  226 (267)
T ss_pred             eEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc
Confidence            7999999976                         26779999999999999999999975543322 11111111 112


Q ss_pred             CCcCCCCCHHHHHHHHHhcccCcCCCCC-cccccccchhh
Q psy14043         59 PEQCGHISVPARELIGQLLNTHADKRPT-AGQLLQVAWFA   97 (205)
Q Consensus        59 ~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~~l~~~~~~   97 (205)
                      ......+++.+++||.+||+.+|.+|++ ..++++|+|+.
T Consensus       227 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        227 LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            2223368999999999999999999996 69999999985

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.68  E-value=1.1e-16  Score=121.93  Aligned_cols=95  Identities=25%  Similarity=0.379  Sum_probs=70.6

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCC-CCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPF-LDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf-~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++|+||+||++|+|++|..|| .+.+..+.+..+
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~  213 (284)
T cd07839         134 KNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  213 (284)
T ss_pred             CCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHH
Confidence            4678999999966                              266799999999999999988775 455554444444


Q ss_pred             HhCCC-----------------CCCC--------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADY-----------------SFPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~-----------------~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....                 .++.        .....+++++++||.+||+.+|.+||++.+++.||||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         214 FRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             HHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            22100                 0000        0112478999999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.68  E-value=1.9e-16  Score=119.07  Aligned_cols=91  Identities=30%  Similarity=0.465  Sum_probs=77.3

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++.                             +.++|+||+|+++|+|++|+.||...+..+....+...
T Consensus       146 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  225 (265)
T cd08217         146 NNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG  225 (265)
T ss_pred             CCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC
Confidence            5789999999772                             56789999999999999999999988777777777665


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ....   ....++.++.+++.+||..+|++||++.++++|||+
T Consensus       226 ~~~~---~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         226 KFRR---IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CCCC---CccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            4422   223688999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.68  E-value=8.3e-17  Score=122.24  Aligned_cols=100  Identities=24%  Similarity=0.403  Sum_probs=75.4

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||.+.                            +.++|+||+||++|+|++|+.||...........+...
T Consensus       130 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  209 (277)
T cd05577         130 DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR  209 (277)
T ss_pred             CCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc
Confidence            45789999999762                            56799999999999999999999765442222223222


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~~  101 (205)
                      ....+......+++.++++|.+||+.+|++|+     ++.+++.|||+....+
T Consensus       210 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         210 TLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             cccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence            22223333346799999999999999999999     7777999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.67  E-value=2e-16  Score=123.38  Aligned_cols=97  Identities=21%  Similarity=0.319  Sum_probs=72.7

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS---   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~---   51 (205)
                      +++.+||+|||++                           ++.++|+||+||++|+|++|+.||......+....+.   
T Consensus       139 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  218 (333)
T cd06650         139 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPV  218 (333)
T ss_pred             CCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcc
Confidence            3578999999987                           2678999999999999999999997655433322111   


Q ss_pred             -----------------------------------------hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc
Q psy14043         52 -----------------------------------------VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL   90 (205)
Q Consensus        52 -----------------------------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~   90 (205)
                                                               +...  +......+++++++|+.+||+++|++||++.++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~el  296 (333)
T cd06650         219 EGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL  296 (333)
T ss_pred             cCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHH
Confidence                                                     0000  000011367899999999999999999999999


Q ss_pred             cccchhhhcc
Q psy14043         91 LQVAWFAEIA  100 (205)
Q Consensus        91 l~~~~~~~~~  100 (205)
                      +.|+|++...
T Consensus       297 l~h~~~~~~~  306 (333)
T cd06650         297 MVHAFIKRSE  306 (333)
T ss_pred             hhCHHHhcCc
Confidence            9999997643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.67  E-value=8.1e-17  Score=122.92  Aligned_cols=94  Identities=29%  Similarity=0.427  Sum_probs=71.9

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHH
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE---ETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~---~~~~~i~   51 (205)
                      ++.+||+|||++                            ++.++|+||+||++|+|++|+.||......   +....+.
T Consensus       138 ~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~  217 (285)
T cd05630         138 HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV  217 (285)
T ss_pred             CCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh
Confidence            578999999976                            256799999999999999999999864322   1222221


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~   99 (205)
                      ...   +......+++++++|+.+||+.+|++|++     +.++++|||+...
T Consensus       218 ~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         218 KEV---QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             hhh---hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence            111   11122368899999999999999999999     8899999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.67  E-value=1.6e-16  Score=121.02  Aligned_cols=95  Identities=26%  Similarity=0.423  Sum_probs=72.0

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++.                              +.++|+||+||++|+|++|+.||.+.+.......+.
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~  214 (284)
T cd07860         135 TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF  214 (284)
T ss_pred             CCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            36789999999761                              557999999999999999999998776554443332


Q ss_pred             hCCC------------------CCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADY------------------SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~------------------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ....                  .++.       .....++++++++|.+||+.+|++||++.+++.||||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         215 RTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            2100                  0000       0112468899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.67  E-value=1.3e-16  Score=120.26  Aligned_cols=81  Identities=25%  Similarity=0.377  Sum_probs=64.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CCCCc-CCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS-FPPEQ-CGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.++|+||+||++|+|++|+.||...+..+....+...... .+... ...++++.++++.+||..+|++||++.++++|
T Consensus       185 ~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         185 DFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             CcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            55789999999999999999999887766655555544322 11111 13578999999999999999999999999999


Q ss_pred             chh
Q psy14043         94 AWF   96 (205)
Q Consensus        94 ~~~   96 (205)
                      |||
T Consensus       265 p~~  267 (267)
T cd06610         265 KFF  267 (267)
T ss_pred             CCC
Confidence            996

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.67  E-value=2.7e-16  Score=120.02  Aligned_cols=98  Identities=23%  Similarity=0.417  Sum_probs=79.8

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|+.||...+..+....+..
T Consensus       150 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~  229 (285)
T cd06648         150 SDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD  229 (285)
T ss_pred             CCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHh
Confidence            3678999999965                             26779999999999999999999988777777776665


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....... ....++..+.+|+.+||..+|++||++.++++|+|+....
T Consensus       230 ~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         230 NLPPKLK-NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             cCCCCCc-ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence            5332221 1224789999999999999999999999999999997754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0579|consensus

Probab=99.67  E-value=1.2e-16  Score=128.72  Aligned_cols=96  Identities=23%  Similarity=0.312  Sum_probs=84.4

Q ss_pred             CCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          3 GAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      +|.|+|+|||.+                                  |+.++||||||++|.||.-+.||-..-+....+-
T Consensus       166 dGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll  245 (1187)
T KOG0579|consen  166 DGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL  245 (1187)
T ss_pred             cCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH
Confidence            688999999988                                  6999999999999999999999988888888888


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +|.+..++-. ..+..++..+.||+.+||.++|..||++.++++|||+...
T Consensus       246 KiaKSePPTL-lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  246 KIAKSEPPTL-LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHhhcCCCcc-cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence            8887665422 2345789999999999999999999999999999999754

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.67  E-value=2.3e-16  Score=118.95  Aligned_cols=80  Identities=23%  Similarity=0.399  Sum_probs=64.1

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|+||+||++|+|++|..||...+.......+.......+ .....++.++.++|.+||..+|++||++.++++|||
T Consensus       186 ~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~  264 (265)
T cd06631         186 GRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP-RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF  264 (265)
T ss_pred             cchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC-CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence            6789999999999999999999987665554444443322222 223468999999999999999999999999999999


Q ss_pred             h
Q psy14043         96 F   96 (205)
Q Consensus        96 ~   96 (205)
                      +
T Consensus       265 ~  265 (265)
T cd06631         265 L  265 (265)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.67  E-value=2.3e-16  Score=118.15  Aligned_cols=91  Identities=27%  Similarity=0.357  Sum_probs=76.5

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++.                             +.++|+|||||++|+|++|+.||...+..+....+...
T Consensus       137 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  216 (256)
T cd08529         137 YDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG  216 (256)
T ss_pred             CCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            5789999999762                             56899999999999999999999888877777776655


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ......   ..+++++.+++.+||+.+|++||++.++++|+|+
T Consensus       217 ~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         217 VFPPVS---QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             CCCCCc---cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            432222   2578999999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.67  E-value=1.4e-16  Score=119.37  Aligned_cols=94  Identities=24%  Similarity=0.335  Sum_probs=73.8

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++.                             +.++||||+||++|+|++|++||......+....+..
T Consensus       134 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~  213 (256)
T cd06612         134 EEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN  213 (256)
T ss_pred             CCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc
Confidence            46789999999872                             5679999999999999999999987666554444333


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .... .......++.++.++|.+||+.+|++||++.++++|+|+
T Consensus       214 ~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         214 KPPP-TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             CCCC-CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            2211 111223578899999999999999999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.67  E-value=2.2e-16  Score=120.78  Aligned_cols=95  Identities=32%  Similarity=0.624  Sum_probs=81.4

Q ss_pred             CCCeEEEEecCCCC--------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      +++.+||+|||++.                          +.++|+||+|+++|+|++|+.||...+..+....+..+..
T Consensus       136 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  215 (290)
T cd05580         136 SDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV  215 (290)
T ss_pred             CCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc
Confidence            36789999999882                          5679999999999999999999988887777777776665


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      .++.    .+++.++++|.+||..+|.+|+     ++.++++|||+....
T Consensus       216 ~~~~----~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         216 RFPS----FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             cCCc----cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence            5554    5799999999999999999999     788999999997654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.67  E-value=2.2e-16  Score=121.14  Aligned_cols=97  Identities=26%  Similarity=0.455  Sum_probs=76.5

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|+.||...........+..
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~  230 (296)
T cd06654         151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT  230 (296)
T ss_pred             CCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc
Confidence            3578999999975                             26789999999999999999999987766554444433


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .... +......+++.+.+++.+||..+|++||++.++++|+|+...
T Consensus       231 ~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         231 NGTP-ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             CCCC-CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence            2221 112234688999999999999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.5e-16  Score=119.70  Aligned_cols=97  Identities=26%  Similarity=0.335  Sum_probs=78.7

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++.                                  +.++|+||+||++|+|++|++||......+..
T Consensus       138 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~  217 (280)
T cd06611         138 LDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL  217 (280)
T ss_pred             CCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH
Confidence            36789999999761                                  34699999999999999999999888777766


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+........ .....++.++.++|.+||..+|++||++.++++|+|+...
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         218 LKILKSEPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHhcCCCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            66665433211 1223578999999999999999999999999999999765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.67  E-value=1.5e-16  Score=124.48  Aligned_cols=101  Identities=26%  Similarity=0.357  Sum_probs=78.3

Q ss_pred             CCCeEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++.                           +.++|+||+||++|+|++|+.||.+....+.+..+....
T Consensus       153 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~  232 (343)
T cd07851         153 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV  232 (343)
T ss_pred             CCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Confidence            36789999999772                           567999999999999999999998877766655554422


Q ss_pred             CCCCC---------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         55 YSFPP---------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        55 ~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      ...+.                           ......++++.+||.+||..+|++||++.++++|||+......
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence            11110                           0012358899999999999999999999999999999875443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.67  E-value=5.5e-17  Score=127.77  Aligned_cols=82  Identities=32%  Similarity=0.538  Sum_probs=66.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---cccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD--YSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQL   90 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~   90 (205)
                      +.++||||+||++|||++|++||.+.+..+....+....  ..+|..  ..+++++++||.+++ .+|.+|++   +.++
T Consensus       214 ~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei  290 (360)
T cd05627         214 NKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPE--VPISEKAKDLILRFC-TDSENRIGSNGVEEI  290 (360)
T ss_pred             CCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCC--CCCCHHHHHHHHHhc-cChhhcCCCCCHHHH
Confidence            667999999999999999999999888888877777543  233322  247899999999977 49999984   6899


Q ss_pred             cccchhhhcc
Q psy14043         91 LQVAWFAEIA  100 (205)
Q Consensus        91 l~~~~~~~~~  100 (205)
                      ++||||..+.
T Consensus       291 ~~hp~f~~~~  300 (360)
T cd05627         291 KSHPFFEGVD  300 (360)
T ss_pred             hcCCCCCCCC
Confidence            9999997754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.67  E-value=2e-16  Score=135.50  Aligned_cols=94  Identities=30%  Similarity=0.391  Sum_probs=74.4

Q ss_pred             CeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          4 AVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         4 ~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +.+||+|||++                              ++.++|||||||++|+|++|+.||........+......
T Consensus       179 ~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~  258 (1021)
T PTZ00266        179 PIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKR  258 (1021)
T ss_pred             CceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhc
Confidence            45899999976                              256899999999999999999999866544433333333


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+.++.   ...++++.+||.+||..+|.+||++.+++.|+|+..+.
T Consensus       259 ~p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        259 GPDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             CCCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence            333322   25789999999999999999999999999999997654

>KOG0671|consensus

Probab=99.67  E-value=1.1e-17  Score=126.69  Aligned_cols=98  Identities=24%  Similarity=0.402  Sum_probs=75.5

Q ss_pred             CCCeEEEEecCCCC--------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++-.|||+|||.|.                          ++++||||+||||+|+.+|...|.+.++.+.+.++.....
T Consensus       247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG  326 (415)
T KOG0671|consen  247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG  326 (415)
T ss_pred             CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence            46689999999992                          9999999999999999999999998877665544433222


Q ss_pred             CCCCC----------------cC--------------------------CCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         56 SFPPE----------------QC--------------------------GHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        56 ~~~~~----------------~~--------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ++|..                .|                          ..-..++.||+.+||.+||.+|+++.|++.|
T Consensus       327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH  406 (415)
T ss_pred             CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence            22210                00                          0113467799999999999999999999999


Q ss_pred             chhhhc
Q psy14043         94 AWFAEI   99 (205)
Q Consensus        94 ~~~~~~   99 (205)
                      |||...
T Consensus       407 pFF~~~  412 (415)
T KOG0671|consen  407 PFFARL  412 (415)
T ss_pred             HHhhcC
Confidence            999754

>KOG0589|consensus

Probab=99.67  E-value=1e-16  Score=125.30  Aligned_cols=93  Identities=28%  Similarity=0.396  Sum_probs=82.8

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.|||.|||+|                             |+.|+|||||||++|||++-+++|.+.+...+..+|.++
T Consensus       142 ~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~  221 (426)
T KOG0589|consen  142 DKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRG  221 (426)
T ss_pred             cCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhc
Confidence            456799999999                             599999999999999999999999999999999999887


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .+...+   ...+.+++.+|..||.++|..||++.+++.+|.+..
T Consensus       222 ~~~Plp---~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  222 LYSPLP---SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             cCCCCC---ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence            743222   368999999999999999999999999999988754

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=1.9e-16  Score=126.14  Aligned_cols=98  Identities=20%  Similarity=0.332  Sum_probs=71.6

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE---EETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~---~~~~   47 (205)
                      +++.+||+|||++                               |+.++||||+||++|||++|+.||.+...   ...+
T Consensus       220 ~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l  299 (392)
T PHA03207        220 EPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL  299 (392)
T ss_pred             CCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence            3578999999987                               25679999999999999999999976432   2222


Q ss_pred             HHHHhC----CCCCCC------------------------C--cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         48 AHISVA----DYSFPP------------------------E--QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        48 ~~i~~~----~~~~~~------------------------~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      ..+...    ...++.                        .  ....++.++++||.+||..+|++||++.+++.||||.
T Consensus       300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~  379 (392)
T PHA03207        300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT  379 (392)
T ss_pred             HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence            222211    101110                        0  0123577899999999999999999999999999997


Q ss_pred             hc
Q psy14043         98 EI   99 (205)
Q Consensus        98 ~~   99 (205)
                      ..
T Consensus       380 ~~  381 (392)
T PHA03207        380 KE  381 (392)
T ss_pred             cc
Confidence            64

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.66  E-value=2e-16  Score=120.47  Aligned_cols=95  Identities=26%  Similarity=0.448  Sum_probs=73.3

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++.                              +.++|+||+||++|+|++|.+||.+.+..+....+.
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~  214 (286)
T cd07847         135 KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIR  214 (286)
T ss_pred             CCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            36789999999772                              467999999999999999999998877655544443


Q ss_pred             hCCC-------------------CCCCC--------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADY-------------------SFPPE--------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~-------------------~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ....                   ..+..        ....++..+.+||.+||..+|++||++.+++.||||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         215 KTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             HHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            2110                   00100        113568899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.66  E-value=3.2e-16  Score=120.02  Aligned_cols=101  Identities=24%  Similarity=0.412  Sum_probs=80.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|||++|+.||...+..+....+..
T Consensus       153 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  232 (292)
T cd06658         153 SDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD  232 (292)
T ss_pred             CCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            3678999999976                             26789999999999999999999988777666665554


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ..... .......+..+++++.+||..+|.+||++.++++|+|+.....+.
T Consensus       233 ~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         233 NLPPR-VKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             cCCCc-cccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence            32221 112235788999999999999999999999999999998655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.66  E-value=3.1e-16  Score=119.86  Aligned_cols=81  Identities=22%  Similarity=0.272  Sum_probs=64.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|+||+||++|+|++|++||......+....+.+..... .......+..+.++|.+||+.+|++||++.++++|||
T Consensus       211 ~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~  289 (291)
T cd06639         211 DARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPT-LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF  289 (291)
T ss_pred             CCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCC-CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence            357999999999999999999998776655555555433211 1112346789999999999999999999999999999


Q ss_pred             hh
Q psy14043         96 FA   97 (205)
Q Consensus        96 ~~   97 (205)
                      ++
T Consensus       290 ~~  291 (291)
T cd06639         290 IK  291 (291)
T ss_pred             cC
Confidence            73

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.66  E-value=3.1e-16  Score=117.59  Aligned_cols=91  Identities=24%  Similarity=0.436  Sum_probs=77.0

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++.                             +.++|+||+||++|+|++|+.||......+....+..+
T Consensus       137 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08218         137 DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG  216 (256)
T ss_pred             CCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence            5779999999772                             56799999999999999999999887777777776655


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....   ...++.+++++|.+||+.+|++||++.++++|+||
T Consensus       217 ~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         217 SYPPV---SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CCCCC---cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            44222   23689999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG1026|consensus

Probab=99.66  E-value=1.5e-16  Score=131.12  Aligned_cols=87  Identities=24%  Similarity=0.431  Sum_probs=78.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+|||+|||++                               ++.++||||+||+++|+++ |+.||.+.++++.++.
T Consensus       638 e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~  717 (774)
T KOG1026|consen  638 ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIEC  717 (774)
T ss_pred             cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHH
Confidence            3568999999999                               3999999999999999988 9999999999999999


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      |.++.. ++.  +++.|.++++|+..||+..|++||++.++-
T Consensus       718 i~~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  718 IRAGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             HHcCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            999877 333  348999999999999999999999998874

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.66  E-value=3.3e-16  Score=117.87  Aligned_cols=94  Identities=34%  Similarity=0.595  Sum_probs=77.0

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDES--EEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~--~~~~~~~i~   51 (205)
                      +++.+||+|||.+.                            +.++|+||+||++|+|++|..||....  ..+....+.
T Consensus       128 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  207 (262)
T cd05572         128 SNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL  207 (262)
T ss_pred             CCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh
Confidence            46789999999872                            567899999999999999999998766  556666665


Q ss_pred             h--CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhc
Q psy14043         52 V--ADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~   99 (205)
                      .  ....+|.    ..+++++++|.+||..+|++|++     +.++++||||...
T Consensus       208 ~~~~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         208 KGNGKLEFPN----YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             ccCCCCCCCc----ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            3  2223332    45899999999999999999999     8999999999765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.66  E-value=4.4e-16  Score=119.55  Aligned_cols=101  Identities=23%  Similarity=0.456  Sum_probs=80.9

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|||++|+.||......+....+..
T Consensus       152 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~  231 (297)
T cd06659         152 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD  231 (297)
T ss_pred             cCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            3678999999976                             26779999999999999999999988777666666554


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ..... ......+++.+.++|.+||+.+|++||++.++++|+|+.....+.
T Consensus       232 ~~~~~-~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~  281 (297)
T cd06659         232 SPPPK-LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPE  281 (297)
T ss_pred             cCCCC-ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcc
Confidence            33222 222345789999999999999999999999999999997654433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0669|consensus

Probab=99.66  E-value=4.6e-16  Score=112.61  Aligned_cols=100  Identities=26%  Similarity=0.368  Sum_probs=83.3

Q ss_pred             CCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          3 GAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      +|.+||+|||++                                  |+++.|+|.-||++.||.++.+.|.+.+..+++.
T Consensus       160 dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~  239 (376)
T KOG0669|consen  160 DGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLH  239 (376)
T ss_pred             CceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHH
Confidence            589999999999                                  4999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCcCCC-------------------------------CCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         49 HISVADYSFPPEQCGH-------------------------------ISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~-------------------------------~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      .|....-.+..+.|++                               -.+++.+|+.++|..||.+|+.+.+++.|.||.
T Consensus       240 ~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  240 LISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             HHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence            8875433332222221                               245888999999999999999999999999997


Q ss_pred             hcccC
Q psy14043         98 EIAIP  102 (205)
Q Consensus        98 ~~~~~  102 (205)
                      .-..+
T Consensus       320 kdp~p  324 (376)
T KOG0669|consen  320 KDPMP  324 (376)
T ss_pred             cCCcc
Confidence            65544

>KOG0263|consensus

Probab=99.66  E-value=2.1e-16  Score=128.07  Aligned_cols=82  Identities=29%  Similarity=0.540  Sum_probs=75.3

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      +...|...+.|+.|||+..++|+||.|.++++||+.++.              ..+.|.||.++|.+++|||+|++||||
T Consensus       530 ifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~--------------~VRiF~GH~~~V~al~~Sp~Gr~LaSg  595 (707)
T KOG0263|consen  530 IFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN--------------SVRIFTGHKGPVTALAFSPCGRYLASG  595 (707)
T ss_pred             hhcccccccceEEECCcccccccCCCCceEEEEEcCCCc--------------EEEEecCCCCceEEEEEcCCCceEeec
Confidence            344566778999999999999999999999999999998              668899999999999999999999999


Q ss_pred             cCCCcEEEEeecCCCC
Q psy14043        179 DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~  194 (205)
                      +.|+.|++||+.++..
T Consensus       596 ~ed~~I~iWDl~~~~~  611 (707)
T KOG0263|consen  596 DEDGLIKIWDLANGSL  611 (707)
T ss_pred             ccCCcEEEEEcCCCcc
Confidence            9999999999998753

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.66  E-value=3.2e-16  Score=122.24  Aligned_cols=103  Identities=25%  Similarity=0.349  Sum_probs=77.1

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++                                  ++.++|+||+||++|+|++|++||.+.+....+
T Consensus       142 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~  221 (334)
T cd07855         142 EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL  221 (334)
T ss_pred             CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH
Confidence            4678999999976                                  256799999999999999999999877655444


Q ss_pred             HHHHhCCCC--------------------CC---C----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADYS--------------------FP---P----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~~--------------------~~---~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+......                    ++   .    ......+++++++|.+||+.+|.+||++.+++.|||+....
T Consensus       222 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         222 KLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             HHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence            333221000                    00   0    01134689999999999999999999999999999998665


Q ss_pred             cCCC
Q psy14043        101 IPNN  104 (205)
Q Consensus       101 ~~~~  104 (205)
                      .+..
T Consensus       302 ~~~~  305 (334)
T cd07855         302 DPDD  305 (334)
T ss_pred             CCcc
Confidence            4443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.66  E-value=2.9e-16  Score=119.45  Aligned_cols=95  Identities=26%  Similarity=0.440  Sum_probs=74.8

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE---SEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~---~~~~~~~~i   50 (205)
                      +++.+||+|||++                            ++.++|+||+||++|+|++|+.||...   ........+
T Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~  211 (278)
T cd05606         132 EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT  211 (278)
T ss_pred             CCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh
Confidence            4678999999976                            256789999999999999999999765   333333333


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      .......+    ..+++++.+++.+||..+|.+|+     ++.++++|||+....
T Consensus       212 ~~~~~~~~----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         212 LTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             hccCCCCC----CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            33233333    35799999999999999999999     899999999997754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.66  E-value=5.1e-16  Score=116.72  Aligned_cols=82  Identities=33%  Similarity=0.554  Sum_probs=70.1

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc---ccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA---GQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~l~   92 (205)
                      +.++|+||+|+++|++++|..||......+....+......++..  ..+++.+.+++.+||+.+|.+||++   .+++.
T Consensus       179 ~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         179 SKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            457999999999999999999999888888888877655554432  1358999999999999999999999   99999


Q ss_pred             cchhhhc
Q psy14043         93 VAWFAEI   99 (205)
Q Consensus        93 ~~~~~~~   99 (205)
                      ||||..+
T Consensus       257 ~~~~~~~  263 (265)
T cd05579         257 HPFFKGI  263 (265)
T ss_pred             CccccCC
Confidence            9999765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.66  E-value=3e-16  Score=122.46  Aligned_cols=103  Identities=22%  Similarity=0.308  Sum_probs=75.9

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++                                 ++.++|+||+||++|+|++|++||.+.+......
T Consensus       141 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~  220 (336)
T cd07849         141 TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLN  220 (336)
T ss_pred             CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            3578999999976                                 1567999999999999999999998765544333


Q ss_pred             HHHhCCC----------------------CCCC-----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         49 HISVADY----------------------SFPP-----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~----------------------~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .+.....                      +...     ......++++.+|+.+||+.+|++||++.++++|||+.....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         221 LILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             HHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence            2221000                      0000     011246788999999999999999999999999999987655


Q ss_pred             CCC
Q psy14043        102 PNN  104 (205)
Q Consensus       102 ~~~  104 (205)
                      +..
T Consensus       301 ~~~  303 (336)
T cd07849         301 PSD  303 (336)
T ss_pred             CCC
Confidence            433

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.66  E-value=4.3e-16  Score=121.21  Aligned_cols=103  Identities=23%  Similarity=0.285  Sum_probs=79.9

Q ss_pred             CCCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++.                                 +.++|+||+||++|+|++|++||.+.+..+.+.
T Consensus       138 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~  217 (330)
T cd07834         138 SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN  217 (330)
T ss_pred             CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH
Confidence            35789999999762                                 456999999999999999999999887776666


Q ss_pred             HHHhCCCCCCCC---------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         49 HISVADYSFPPE---------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .+.......+..                           ....+++++.++|.+||+.+|.+||++.++++||||.....
T Consensus       218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         218 LIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             HHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            555422111100                           11246889999999999999999999999999999987655


Q ss_pred             CCC
Q psy14043        102 PNN  104 (205)
Q Consensus       102 ~~~  104 (205)
                      +..
T Consensus       298 ~~~  300 (330)
T cd07834         298 PED  300 (330)
T ss_pred             ccc
Confidence            443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0662|consensus

Probab=99.65  E-value=3.6e-16  Score=107.98  Aligned_cols=98  Identities=26%  Similarity=0.383  Sum_probs=80.0

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      .+|.+|++|||++                              |+...|+||-||++.|+.. |.+.|.|.+..+++.+|
T Consensus       136 ~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkri  215 (292)
T KOG0662|consen  136 RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  215 (292)
T ss_pred             cCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHH
Confidence            4799999999999                              5899999999999999976 99999999998888888


Q ss_pred             HhCCCCCCCCc-------------------------CCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVADYSFPPEQ-------------------------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      -...-......                         -+++....+|+++++|.-+|.+|+++++.++||||.+.
T Consensus       216 f~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  216 FRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             HHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence            54211111111                         12456788999999999999999999999999999764

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.65  E-value=5.7e-16  Score=120.71  Aligned_cols=112  Identities=21%  Similarity=0.272  Sum_probs=80.6

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++                                  ++.++|+||+||++|+|++|++||.+.+....+
T Consensus       140 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~  219 (332)
T cd07857         140 ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQL  219 (332)
T ss_pred             CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHH
Confidence            4678999999976                                  156789999999999999999999876654443


Q ss_pred             HHHHhCCC-----------------------CCC----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADY-----------------------SFP----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~-----------------------~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+.....                       ..+    .......+..+++|+.+||+.+|.+||++.+++.|||+....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         220 NQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             HHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence            33222110                       000    011224688999999999999999999999999999998766


Q ss_pred             cCCCccccccccc
Q psy14043        101 IPNNTKVNCLAWH  113 (205)
Q Consensus       101 ~~~~~~~~~~~~~  113 (205)
                      .+...+.-+..++
T Consensus       300 ~~~~~~~~~~~~~  312 (332)
T cd07857         300 DPDDEPVCQKPFD  312 (332)
T ss_pred             Ccccccccccccc
Confidence            5555444333333

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.65  E-value=5.2e-16  Score=119.53  Aligned_cols=83  Identities=28%  Similarity=0.547  Sum_probs=69.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC---cccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT---AGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l~   92 (205)
                      +.++|+||+||++|||++|..||.+.+..+....+.......+... ..++++++++|.+||+.+|++||+   +.++++
T Consensus       194 ~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         194 GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            5679999999999999999999998888888887776655444332 257899999999999999999997   578899


Q ss_pred             cchhhhc
Q psy14043         93 VAWFAEI   99 (205)
Q Consensus        93 ~~~~~~~   99 (205)
                      |||+...
T Consensus       273 ~~~~~~~  279 (305)
T cd05609         273 HRFFLGL  279 (305)
T ss_pred             CccccCC
Confidence            9998553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.65  E-value=2.1e-16  Score=120.26  Aligned_cols=98  Identities=27%  Similarity=0.401  Sum_probs=73.2

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++|+||+||++|+|++|..||........ ..+...
T Consensus       132 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~  210 (279)
T cd05633         132 EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRM  210 (279)
T ss_pred             CCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHH
Confidence            4678999999976                            26679999999999999999999975422111 111111


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....+...+..++++++++|.+||..+|++|+     ++.++++|||++.+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         211 TLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             hhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            11222223346899999999999999999999     599999999997754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.65  E-value=5.2e-16  Score=117.10  Aligned_cols=78  Identities=31%  Similarity=0.514  Sum_probs=63.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|+||+||++|+|++|+.||...+.......+.....   +.....++..++++|.+||+.+|.+||++.++++|+|
T Consensus       190 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  266 (267)
T cd06628         190 TRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF  266 (267)
T ss_pred             CchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence            4579999999999999999999987766555554444222   1222368999999999999999999999999999999


Q ss_pred             h
Q psy14043         96 F   96 (205)
Q Consensus        96 ~   96 (205)
                      |
T Consensus       267 ~  267 (267)
T cd06628         267 L  267 (267)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=4.2e-16  Score=120.53  Aligned_cols=83  Identities=35%  Similarity=0.625  Sum_probs=70.1

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC----ccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT----AGQLL   91 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l   91 (205)
                      +.++||||+||++|+|++|+.||.+.+..+.+..+......++..  ...+++++++|.+||..+|++||+    +.+++
T Consensus       210 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll  287 (316)
T cd05574         210 GSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK  287 (316)
T ss_pred             CchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence            347899999999999999999999888877777776655544432  237999999999999999999999    99999


Q ss_pred             ccchhhhcc
Q psy14043         92 QVAWFAEIA  100 (205)
Q Consensus        92 ~~~~~~~~~  100 (205)
                      .|+|+....
T Consensus       288 ~~~~~~~~~  296 (316)
T cd05574         288 QHPFFRGVN  296 (316)
T ss_pred             cCchhhcCC
Confidence            999997654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.65  E-value=6.1e-16  Score=116.53  Aligned_cols=95  Identities=26%  Similarity=0.396  Sum_probs=73.7

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-----SEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-----~~~~~~~~   49 (205)
                      +++.+||+|||.+                           ++.++|+||+||++|+|++|+.||...     ...+....
T Consensus       136 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  215 (265)
T cd06605         136 SRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY  215 (265)
T ss_pred             CCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH
Confidence            3578999999986                           267799999999999999999999654     23334444


Q ss_pred             HHhCCC-CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         50 ISVADY-SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        50 i~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +..... ..+.   ..++++++++|.+||..+|++||++.+++.||||+..
T Consensus       216 ~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         216 IVNEPPPRLPS---GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HhcCCCCCCCh---hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            433222 1111   1278999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.65  E-value=5.3e-16  Score=118.07  Aligned_cols=94  Identities=22%  Similarity=0.310  Sum_probs=72.4

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.+||+|||++.                              +.++|+||+||++|+|++|++||.+.+.......+.+
T Consensus       135 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  214 (283)
T cd07835         135 EGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFR  214 (283)
T ss_pred             CCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            5789999999761                              5679999999999999999999987766544443322


Q ss_pred             CCC-------------------------CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADY-------------------------SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~-------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...                         .........++..+.++|.+||+.+|.+||+..++++|+||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         215 TLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             HhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            100                         00111123578899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=5.5e-16  Score=118.37  Aligned_cols=99  Identities=26%  Similarity=0.355  Sum_probs=74.3

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-----SEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-----~~~~~~~~   49 (205)
                      +++.+||+|||++                           ++.++|+||+||++|+|++|+.||...     ...+....
T Consensus       140 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  219 (287)
T cd06621         140 RKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY  219 (287)
T ss_pred             cCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH
Confidence            3678999999986                           266899999999999999999999755     23344444


Q ss_pred             HHhCCC-CCCCCc--CCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         50 ISVADY-SFPPEQ--CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~~~-~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +..... ..+...  ...+++.+++||.+||..+|++||++.++++|+|+....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         220 IVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             HhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence            443221 111111  123568899999999999999999999999999996543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.65  E-value=2.4e-16  Score=122.90  Aligned_cols=99  Identities=33%  Similarity=0.548  Sum_probs=78.9

Q ss_pred             CCCeEEEEecCCCC-----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~   46 (205)
                      .++.+||+|||++.                                   +.++||||+||++|||++|+.||.+.+..+.
T Consensus       137 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~  216 (332)
T cd05623         137 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET  216 (332)
T ss_pred             CCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH
Confidence            36789999999761                                   4579999999999999999999999888888


Q ss_pred             HHHHHhCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhcc
Q psy14043         47 RAHISVADYSFP-PEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        47 ~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~~  100 (205)
                      +..+.......+ +.....+++++++|+.+||..++++  |+++.++++||||..+.
T Consensus       217 ~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         217 YGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             HHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence            888876543322 1223468999999999999765554  67899999999997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.65  E-value=2.3e-16  Score=121.15  Aligned_cols=98  Identities=27%  Similarity=0.466  Sum_probs=75.7

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++.                             +.++|+||+||++|+|++|++||.+.+.......+..
T Consensus       150 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~  229 (297)
T cd06656         150 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT  229 (297)
T ss_pred             CCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc
Confidence            36789999999761                             5679999999999999999999987655443333332


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ...+ +......+++.+++|+.+||..+|++||++.++++|||+....
T Consensus       230 ~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  276 (297)
T cd06656         230 NGTP-ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK  276 (297)
T ss_pred             CCCC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence            2111 1112335789999999999999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0611|consensus

Probab=99.65  E-value=2.7e-16  Score=120.66  Aligned_cols=91  Identities=33%  Similarity=0.552  Sum_probs=83.9

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .|+++||+|||++                             .++.+|.|||||+||.|..|..||.|.+...+...|.+
T Consensus       188 ~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~  267 (668)
T KOG0611|consen  188 QNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR  267 (668)
T ss_pred             CCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc
Confidence            4688999999999                             28899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      +.+.-|.     .+.++..||..||..+|++|.+.+++..|=|+.
T Consensus       268 GaYrEP~-----~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  268 GAYREPE-----TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             ccccCCC-----CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence            9988775     577899999999999999999999999998873

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.65  E-value=5e-16  Score=118.14  Aligned_cols=96  Identities=23%  Similarity=0.384  Sum_probs=74.0

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~-~~~~~~~   48 (205)
                      +++.+||+|||++.                                +.++|+||+||++|+|++|+.||... ...+.+.
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  218 (283)
T cd06617         139 RNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK  218 (283)
T ss_pred             CCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH
Confidence            36789999999861                                45789999999999999999999643 2233333


Q ss_pred             HHHhC-CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         49 HISVA-DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        49 ~i~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+... ....+.   ..++.+++++|.+||..+|++||++.++++|+|+....
T Consensus       219 ~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         219 QVVEEPSPQLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             HHHhcCCCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            33332 222222   25789999999999999999999999999999997753

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0595|consensus

Probab=99.65  E-value=2.6e-16  Score=120.26  Aligned_cols=94  Identities=30%  Similarity=0.489  Sum_probs=82.6

Q ss_pred             CeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          4 AVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         4 ~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      -.+||+|||+|                            |+.|+|+||+|+++|++++|++||...+..+++..+.++..
T Consensus       152 ~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~  231 (429)
T KOG0595|consen  152 PVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE  231 (429)
T ss_pred             ceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc
Confidence            57999999999                            69999999999999999999999999999999999888766


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+. .....+....+++..++++++..|....+.+.|+++..
T Consensus       232 ~~~~-~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~  273 (429)
T KOG0595|consen  232 IVPV-LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA  273 (429)
T ss_pred             ccCc-hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence            5443 23357888889999999999999999999999988753

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.65  E-value=6e-16  Score=118.48  Aligned_cols=97  Identities=24%  Similarity=0.408  Sum_probs=74.5

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.+||+|||++.                              +.++|+||+||++|+|++|.+||...+..+....+..
T Consensus       139 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~  218 (294)
T PLN00009        139 TNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFR  218 (294)
T ss_pred             CCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            4579999999761                              5679999999999999999999987766555544432


Q ss_pred             CCCC---------------------CCCC----cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYS---------------------FPPE----QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~---------------------~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ....                     ++..    ....+++++.+++.+||+.+|++||++.++++|+|+.+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        219 ILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             HhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence            1100                     0000    113478899999999999999999999999999999764

>KOG0271|consensus

Probab=99.65  E-value=1.4e-15  Score=114.88  Aligned_cols=84  Identities=25%  Similarity=0.375  Sum_probs=78.1

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...++.+.|+||++++|+++.|+.+++|+-.+++              ...+|+||-+.|+.++||.|.+.|+|||
T Consensus       363 mtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk--------------~lasfRGHv~~VYqvawsaDsRLlVS~S  428 (480)
T KOG0271|consen  363 MTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK--------------FLASFRGHVAAVYQVAWSADSRLLVSGS  428 (480)
T ss_pred             hhchhhheeeEEECCCccEEEEeecccceeeeeCCCcc--------------hhhhhhhccceeEEEEeccCccEEEEcC
Confidence            35677789999999999999999999999999999998              7789999999999999999999999999


Q ss_pred             CCCcEEEEeecCCCCCCC
Q psy14043        180 ETGLIIVWMLYKEKNPQD  197 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~~~~  197 (205)
                      .|.|++|||+.+.+..++
T Consensus       429 kDsTLKvw~V~tkKl~~D  446 (480)
T KOG0271|consen  429 KDSTLKVWDVRTKKLKQD  446 (480)
T ss_pred             CCceEEEEEeeeeeeccc
Confidence            999999999999887554

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.65  E-value=4.4e-16  Score=118.23  Aligned_cols=95  Identities=28%  Similarity=0.390  Sum_probs=76.2

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+|++|||++.                             +.++|+||+||++|||++|+.||...........+..
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~  215 (277)
T cd06642         136 EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK  215 (277)
T ss_pred             CCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhc
Confidence            46789999999772                             6689999999999999999999976665555554443


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...   .......+.++.++|.+||+.+|++||++.++++|+|+...
T Consensus       216 ~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         216 NSP---PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             CCC---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence            322   12223578899999999999999999999999999999754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.65  E-value=4.9e-16  Score=118.35  Aligned_cols=95  Identities=29%  Similarity=0.494  Sum_probs=72.5

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++.                              +.++||||+||++|+|++|++||.+....+....+.
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~  214 (286)
T cd07846         135 QSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHII  214 (286)
T ss_pred             CCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence            46789999999761                              467999999999999999999998776554444433


Q ss_pred             hCCCC-------------------CCC--------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYS-------------------FPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~-------------------~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....                   .+.        .....++..+.+|+.+||..+|++||++.++++|+||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         215 KCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             HHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            21110                   000        0123578899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.64  E-value=5.2e-16  Score=119.49  Aligned_cols=81  Identities=27%  Similarity=0.333  Sum_probs=60.8

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCc----------------------------CCCCCH
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ----------------------------CGHISV   67 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~----------------------------~~~~~~   67 (205)
                      +.++|+||+||++|+|++|.+||.+.+.......+.......+...                            ....++
T Consensus       202 ~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (310)
T cd07865         202 GPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDP  281 (310)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCH
Confidence            4579999999999999999999988776555444443211111100                            001356


Q ss_pred             HHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         68 PARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        68 ~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .+++||.+||..+|.+||++.++++||||
T Consensus       282 ~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         282 HALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            78899999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.64  E-value=6.5e-16  Score=117.49  Aligned_cols=96  Identities=25%  Similarity=0.384  Sum_probs=72.7

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH-------HHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE-------EETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~-------~~~~   47 (205)
                      +++.+||+|||++                           ++.++|+||+||++|+|++|+.||.....       .+..
T Consensus       130 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  209 (279)
T cd06619         130 TRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLL  209 (279)
T ss_pred             CCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHH
Confidence            3678999999987                           26789999999999999999999964321       1222


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+.....  +.......+++++++|.+||+.+|.+||++.++++|+|+...
T Consensus       210 ~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         210 QCIVDEDP--PVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHhccCC--CCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            22222111  111123578999999999999999999999999999999765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.64  E-value=4.4e-16  Score=118.27  Aligned_cols=95  Identities=31%  Similarity=0.424  Sum_probs=77.4

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.++|+|||++                             .+.++|+||+||++|||++|++||...+.......+...
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~  216 (277)
T cd06640         137 QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN  216 (277)
T ss_pred             CCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC
Confidence            577999999988                             167899999999999999999999877766655554433


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..   +......+..+.+++.+||..+|++||++.++++|+|+....
T Consensus       217 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06640         217 NP---PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA  260 (277)
T ss_pred             CC---CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence            22   222335788999999999999999999999999999996643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.64  E-value=5.8e-16  Score=119.45  Aligned_cols=98  Identities=21%  Similarity=0.312  Sum_probs=72.6

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++|+||+||++|+|++|..||...+.......+....
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  214 (308)
T cd06615         135 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPV  214 (308)
T ss_pred             cCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcc
Confidence            3678999999976                           2667999999999999999999997655443333222111


Q ss_pred             CCC----------------------------------CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         55 YSF----------------------------------PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        55 ~~~----------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...                                  +......++.++++|+.+||..+|++||++.++++|||+...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         215 SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             ccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence            000                                  000011367889999999999999999999999999999663

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG1989|consensus

Probab=99.64  E-value=1.1e-16  Score=132.19  Aligned_cols=74  Identities=35%  Similarity=0.626  Sum_probs=63.8

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.|+|||+|||+||.|.+...||.+...    -.|.++.+.+|+.  +.++..+++||..||+.+|++||+..+++.+-+
T Consensus       236 ~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  236 GEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF  309 (738)
T ss_pred             cchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence            9999999999999999999999976533    3567788888864  368999999999999999999999998886543

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.64  E-value=5.1e-16  Score=121.96  Aligned_cols=99  Identities=21%  Similarity=0.388  Sum_probs=73.7

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++                            ++.++||||+||++|+|++|+.||...+.......+...
T Consensus       153 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  232 (353)
T cd07850         153 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQ  232 (353)
T ss_pred             CCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence            3678999999987                            267899999999999999999999877655444433221


Q ss_pred             CCC----------------------C--------------CCC---cCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         54 DYS----------------------F--------------PPE---QCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        54 ~~~----------------------~--------------~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ...                      .              +..   .....++++++||.+||+.+|++||++.++++||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~  312 (353)
T cd07850         233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP  312 (353)
T ss_pred             cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence            000                      0              000   0112466789999999999999999999999999


Q ss_pred             hhhhcc
Q psy14043         95 WFAEIA  100 (205)
Q Consensus        95 ~~~~~~  100 (205)
                      |+....
T Consensus       313 ~~~~~~  318 (353)
T cd07850         313 YINVWY  318 (353)
T ss_pred             hHhhcc
Confidence            997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.64  E-value=5.3e-16  Score=117.11  Aligned_cols=93  Identities=25%  Similarity=0.367  Sum_probs=70.5

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                                +.++|+||+||++|+|++|.+||...........+
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~  221 (267)
T cd06645         142 NGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM  221 (267)
T ss_pred             CCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence            5779999999761                                45799999999999999999999765544433333


Q ss_pred             HhCCCCCCC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         51 SVADYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        51 ~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .......+. .....++..++++|.+||..+|++||++.++++|||
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         222 TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            333222221 111246889999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.64  E-value=4.9e-16  Score=121.57  Aligned_cols=99  Identities=24%  Similarity=0.427  Sum_probs=76.3

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                           ++.++|+||+||++|||++|+.||.+.+....+..+....
T Consensus       152 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~  231 (342)
T cd07879         152 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT  231 (342)
T ss_pred             CCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            3678999999977                           2568999999999999999999998876655544443311


Q ss_pred             -----------------------CCCCCC----cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 -----------------------YSFPPE----QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 -----------------------~~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                                             ...+..    .....++++.+||.+||+.+|.+||++.+++.|+||....
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             CCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence                                   011110    0124678899999999999999999999999999997764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.64  E-value=5.8e-16  Score=117.89  Aligned_cols=95  Identities=24%  Similarity=0.356  Sum_probs=74.0

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||.+.                            +.++|+||+||++|+|++|.+||.+.+..+....+...
T Consensus       142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~  221 (287)
T cd07838         142 SDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDV  221 (287)
T ss_pred             cCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHH
Confidence            35789999999872                            56899999999999999999999988777666655431


Q ss_pred             CC-----CCC------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DY-----SFP------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~-----~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..     .++                  ......+++.+.++|.+||+.+|++||++.++++|+|+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         222 IGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            10     000                  00112356888999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.64  E-value=8.2e-16  Score=118.53  Aligned_cols=96  Identities=23%  Similarity=0.338  Sum_probs=77.3

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++                            ++.++||||+||++|||++|++||.+.+.......+...
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~  229 (307)
T cd06607         150 EPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  229 (307)
T ss_pred             CCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC
Confidence            3578999999977                            245799999999999999999999887776665555543


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....  ....++..++++|.+||..+|++||++.+++.|+|+...
T Consensus       230 ~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         230 DSPTL--SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             CCCCC--CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence            32111  122478899999999999999999999999999999654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.64  E-value=6.4e-16  Score=117.63  Aligned_cols=89  Identities=24%  Similarity=0.370  Sum_probs=74.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++||||+||++|||++ |..||.+.+..+....
T Consensus       159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~  238 (283)
T cd05048         159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM  238 (283)
T ss_pred             CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            3578999999976                               2667999999999999998 9999998888888777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.......   ....+++++.+|+.+||+.+|.+||++.+++++
T Consensus       239 i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         239 IRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            77654322   224689999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.64  E-value=1.2e-15  Score=116.99  Aligned_cols=99  Identities=24%  Similarity=0.429  Sum_probs=79.8

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             ++.++|+||+||++|+|++|..||.+....+....+..
T Consensus       151 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~  230 (292)
T cd06657         151 HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD  230 (292)
T ss_pred             CCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            3578999999975                             16789999999999999999999988777666666554


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ...... .....+++.+.+++.+||..+|.+||++.+++.|+|+.....
T Consensus       231 ~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         231 NLPPKL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             hCCccc-CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence            332211 122357899999999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.64  E-value=9e-16  Score=114.98  Aligned_cols=91  Identities=27%  Similarity=0.373  Sum_probs=75.7

Q ss_pred             CCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||.+.                            +.++|+||+|+++|+|++|+.||.+.+.......+....
T Consensus       138 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  217 (256)
T cd08220         138 KMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT  217 (256)
T ss_pred             CCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC
Confidence            4578999999872                            668999999999999999999998877776666665543


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...   ....+++++++++.+||..+|++||++.++++|||+
T Consensus       218 ~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         218 FAP---ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             CCC---CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            321   223589999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=7.7e-16  Score=116.82  Aligned_cols=96  Identities=25%  Similarity=0.433  Sum_probs=76.0

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.++|+|||.+                              ++.++|+||+||++|+|++|.+||.+.........+..
T Consensus       137 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~  216 (277)
T cd06917         137 TGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK  216 (277)
T ss_pred             CCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc
Confidence            578999999966                              15689999999999999999999987766555444433


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+  +.......+.++.+++.+||..+|++||++.+++.|+|++...
T Consensus       217 ~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         217 SKP--PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             CCC--CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            322  1111123789999999999999999999999999999997644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.64  E-value=1.1e-15  Score=117.11  Aligned_cols=96  Identities=28%  Similarity=0.392  Sum_probs=73.8

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESE-EETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~   48 (205)
                      +++.+||+|||++.                                +.++|+||+||++|+|++|+.||..... .+.+.
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  229 (296)
T cd06618         150 ASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT  229 (296)
T ss_pred             CCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH
Confidence            46789999999762                                3468999999999999999999975322 34444


Q ss_pred             HHHhCCC-CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         49 HISVADY-SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        49 ~i~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+..... ..+.  ...++.++++|+.+||..+|++||++.++++|+|+...
T Consensus       230 ~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         230 KILQEEPPSLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             HHhcCCCCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence            4443322 2221  12478899999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.63  E-value=8.5e-16  Score=117.01  Aligned_cols=94  Identities=31%  Similarity=0.465  Sum_probs=72.6

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||.+.                               +.++||||+||++|+|++|.+||.+......+..+.
T Consensus       135 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~  214 (286)
T cd07832         135 DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVF  214 (286)
T ss_pred             CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHH
Confidence            5789999999651                               568999999999999999999998777665555443


Q ss_pred             hCCCC-------------------CCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYS-------------------FPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~-------------------~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....                   ++.       ....+.+.++.+||.+||..+|.+||++.++++||||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~  285 (286)
T cd07832         215 RTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF  285 (286)
T ss_pred             HHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence            31100                   000       0112467899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0614|consensus

Probab=99.63  E-value=4e-16  Score=122.55  Aligned_cols=96  Identities=30%  Similarity=0.519  Sum_probs=84.7

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++|-+||.|||+|+                            +.++|.||||+++|||++|.+||.+.++..++..|.++
T Consensus       555 ~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG  634 (732)
T KOG0614|consen  555 NRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG  634 (732)
T ss_pred             cCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh
Confidence            47899999999993                            88999999999999999999999999999999999987


Q ss_pred             CC--CCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhccc
Q psy14043         54 DY--SFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 ~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~~  101 (205)
                      .-  .+|.    .++..+.+||+++...+|.+|+.     ..++..|.||....+
T Consensus       635 id~i~~Pr----~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw  685 (732)
T KOG0614|consen  635 IDKIEFPR----RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW  685 (732)
T ss_pred             hhhhhccc----ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence            54  4453    68999999999999999999974     678999999976543

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.63  E-value=1.2e-15  Score=115.42  Aligned_cols=95  Identities=26%  Similarity=0.488  Sum_probs=74.2

Q ss_pred             CCCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      .++.+|++|||++.                                 +.++|+||+|+++|++++|..||......+...
T Consensus       143 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~  222 (272)
T cd06629         143 ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF  222 (272)
T ss_pred             CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH
Confidence            36789999999661                                 456899999999999999999997665554444


Q ss_pred             HHHhC--CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         49 HISVA--DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        49 ~i~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .+...  ...++......++..++++|.+||..+|++||++.++++|||+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         223 KLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            43322  2223333334578999999999999999999999999999995

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.63  E-value=7.5e-16  Score=117.07  Aligned_cols=95  Identities=34%  Similarity=0.448  Sum_probs=73.6

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||.+                              ++.++|+||+||++|+|++|++||.+.+..+....+.
T Consensus       133 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~  212 (283)
T cd05118         133 TEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIF  212 (283)
T ss_pred             CCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            3588999999876                              1567999999999999999999998877665554443


Q ss_pred             hCCCC-------------------CC-------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYS-------------------FP-------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~-------------------~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....                   ++       ......++.++++||.+||..+|.+||++.+++.|||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            21100                   00       01122468899999999999999999999999999996

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0577|consensus

Probab=99.63  E-value=3e-16  Score=125.36  Aligned_cols=95  Identities=23%  Similarity=0.355  Sum_probs=84.9

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++|.|||+|||.|                            |+-++||||||+++.||.-.+||+.+.+....++.|.++
T Consensus       161 e~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN  240 (948)
T KOG0577|consen  161 EPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  240 (948)
T ss_pred             CCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc
Confidence            4799999999988                            699999999999999999999999999999999999887


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+-..  ...++..++.|+..||++-|..||+.++++.|+|+..
T Consensus       241 esPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  241 ESPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR  283 (948)
T ss_pred             CCCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence            654332  2468999999999999999999999999999999853

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.63  E-value=1.3e-15  Score=113.78  Aligned_cols=91  Identities=36%  Similarity=0.614  Sum_probs=77.7

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++.                             +.++|+||+|+++|++++|+.||......+....+..
T Consensus       128 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~  207 (250)
T cd05123         128 ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK  207 (250)
T ss_pred             CCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence            35789999999772                             4679999999999999999999988877777777766


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc---ccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA---GQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~l~~~~~   96 (205)
                      ....++.    ..+..+++++.+||..+|++||++   .+++.||||
T Consensus       208 ~~~~~~~----~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         208 DPLRFPE----FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            5554444    468999999999999999999999   899999996

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.63  E-value=1.1e-15  Score=114.93  Aligned_cols=92  Identities=23%  Similarity=0.358  Sum_probs=75.1

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||.+.                             +.++|+||+|+++|+|++|..||...........+..
T Consensus       140 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~  219 (260)
T cd08222         140 KNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE  219 (260)
T ss_pred             ecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence            35679999999661                             4579999999999999999999987776666666554


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...+.   ....++.++.++|.+||..+|++||++.++++|||+
T Consensus       220 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         220 GPTPS---LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             CCCCC---CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            43222   123578999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=9e-16  Score=115.36  Aligned_cols=94  Identities=29%  Similarity=0.399  Sum_probs=73.9

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||.+.                                +.++|+||+||++|+|++|++||...+.......
T Consensus       136 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~  215 (262)
T cd06613         136 EDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL  215 (262)
T ss_pred             CCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            35789999999761                                3468999999999999999999988776666555


Q ss_pred             HHhCCCCCCC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         50 ISVADYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        50 i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +....+..+. .....++.++++|+.+||..+|.+||++.+++.|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         216 ISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            5554332211 112246788999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.63  E-value=9.6e-16  Score=117.51  Aligned_cols=101  Identities=32%  Similarity=0.404  Sum_probs=76.3

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++.                              +.++|+||+||++|+|++|.+||.+.+..+.+..+.
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~  216 (298)
T cd07841         137 SDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIF  216 (298)
T ss_pred             CCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHH
Confidence            36789999999772                              467999999999999999999998776655554443


Q ss_pred             hCCCCC--------------------C----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         52 VADYSF--------------------P----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        52 ~~~~~~--------------------~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      ......                    +    .......+.++.+||.+||..+|++||++.++++|+|+.+...+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~  291 (298)
T cd07841         217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP  291 (298)
T ss_pred             HHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence            211000                    0    00113457899999999999999999999999999999875443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.63  E-value=1e-15  Score=115.62  Aligned_cols=93  Identities=28%  Similarity=0.446  Sum_probs=71.4

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                                +.++|+||+||++|+|++|+.||......+....
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~  220 (266)
T cd06651         141 SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK  220 (266)
T ss_pred             CCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence            35679999999761                                4579999999999999999999987655554444


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      +.....  .+.....+++.+++++ +||..+|++||++.++++|||+.
T Consensus       221 ~~~~~~--~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         221 IATQPT--NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HhcCCC--CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            333221  1222235789999999 67778999999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.62  E-value=1.4e-15  Score=115.47  Aligned_cols=88  Identities=22%  Similarity=0.359  Sum_probs=74.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++||||+||++|||++ |..||.+.+..+....
T Consensus       157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~  236 (280)
T cd05049         157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC  236 (280)
T ss_pred             CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            3578999999976                               1667999999999999998 9999988888888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+....++   ..++..+++++.+||..+|++||++.++++
T Consensus       237 ~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         237 ITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            7766554332   358999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.62  E-value=1.1e-15  Score=116.57  Aligned_cols=80  Identities=26%  Similarity=0.312  Sum_probs=61.5

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|+||+||++|+|++|+.||...........+...... .......++.+++++|.+||+.+|++||++.++++|+|
T Consensus       207 ~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~  285 (286)
T cd06638         207 DARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF  285 (286)
T ss_pred             cchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence            34799999999999999999999876655444443332211 11122346789999999999999999999999999998


Q ss_pred             h
Q psy14043         96 F   96 (205)
Q Consensus        96 ~   96 (205)
                      +
T Consensus       286 ~  286 (286)
T cd06638         286 I  286 (286)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.62  E-value=1.2e-15  Score=116.12  Aligned_cols=95  Identities=38%  Similarity=0.491  Sum_probs=73.5

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+.                               +.++||||+||++|+|++|+.||...+.......+
T Consensus       135 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~  214 (287)
T cd07840         135 NDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKI  214 (287)
T ss_pred             CCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            36789999999762                               56799999999999999999999887776665555


Q ss_pred             HhCCCCCCCC--------------------------cCCC-CCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADYSFPPE--------------------------QCGH-ISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~~~~~--------------------------~~~~-~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..........                          .... .++++.+++.+||..+|.+||++.++++|+|+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         215 FELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            4321111000                          0112 38899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.62  E-value=1.9e-15  Score=118.00  Aligned_cols=100  Identities=27%  Similarity=0.280  Sum_probs=76.3

Q ss_pred             CCCeEEEEecCCCC-----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~   46 (205)
                      +++.+||+|||++.                                   +.++|+||+||++|+|++|++||.+....+.
T Consensus       142 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~  221 (337)
T cd07852         142 SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ  221 (337)
T ss_pred             CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            46789999999662                                   4579999999999999999999987665554


Q ss_pred             HHHHHhCCC---------------------------CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         47 RAHISVADY---------------------------SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        47 ~~~i~~~~~---------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...+.....                           .........++.++.++|.+||+.+|++||++.++++|+|+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         222 LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence            443322111                           01111223478999999999999999999999999999999876


Q ss_pred             cc
Q psy14043        100 AI  101 (205)
Q Consensus       100 ~~  101 (205)
                      ..
T Consensus       302 ~~  303 (337)
T cd07852         302 HN  303 (337)
T ss_pred             cc
Confidence            44

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.62  E-value=9.9e-16  Score=115.21  Aligned_cols=95  Identities=29%  Similarity=0.384  Sum_probs=75.5

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDE---SEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~---~~~~~~~~   49 (205)
                      +++.+||+|||.+.                             +.++|+||||+++|+|++|+.||...   ...+....
T Consensus       135 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  214 (264)
T cd06623         135 SKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA  214 (264)
T ss_pred             CCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH
Confidence            46789999999772                             55799999999999999999999766   44455555


Q ss_pred             HHhCCCCCCCCcCCC-CCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         50 ISVADYSFPPEQCGH-ISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        50 i~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +......   ..... ++..+.++|.+||..+|++||++.++++|||++..
T Consensus       215 ~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         215 ICDGPPP---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             HhcCCCC---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            5432221   11224 78999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.62  E-value=9.6e-16  Score=120.65  Aligned_cols=96  Identities=25%  Similarity=0.398  Sum_probs=66.2

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcC-CCCCCCCCH---------H
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSG-VSPFLDESE---------E   44 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g-~~pf~~~~~---------~   44 (205)
                      ++.+||+|||++                            ++.++||||+||++|||+++ .++|.....         .
T Consensus       193 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~  272 (357)
T PHA03209        193 VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCH  272 (357)
T ss_pred             CCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHH
Confidence            577999999987                            27789999999999999985 444443211         1


Q ss_pred             HHHHHHHhC----CCCCCC--------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         45 ETRAHISVA----DYSFPP--------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        45 ~~~~~i~~~----~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ..+..+...    ...++.                          ....+++.++.+||.+||+.||.+||++.++++||
T Consensus       273 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp  352 (357)
T PHA03209        273 SHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYP  352 (357)
T ss_pred             HHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCc
Confidence            111111110    001110                          01124677888999999999999999999999999


Q ss_pred             hhhh
Q psy14043         95 WFAE   98 (205)
Q Consensus        95 ~~~~   98 (205)
                      ||.+
T Consensus       353 ~f~~  356 (357)
T PHA03209        353 MFAQ  356 (357)
T ss_pred             hhcc
Confidence            9975

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=1.2e-15  Score=118.85  Aligned_cols=98  Identities=34%  Similarity=0.580  Sum_probs=76.7

Q ss_pred             CCCeEEEEecCCCC-----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~   46 (205)
                      .++.+||+|||++.                                   +.++||||+||++|+|++|+.||.+.+..+.
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~  216 (331)
T cd05597         137 KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET  216 (331)
T ss_pred             CCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH
Confidence            46789999999861                                   3468999999999999999999998888777


Q ss_pred             HHHHHhCCC--CCCCCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhcc
Q psy14043         47 RAHISVADY--SFPPEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        47 ~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~~  100 (205)
                      ...+.....  .++. ....+++++++||.+||..++.+  |+++.++++|||+....
T Consensus       217 ~~~i~~~~~~~~~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~  273 (331)
T cd05597         217 YGKIMNHKEHFQFPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGID  273 (331)
T ss_pred             HHHHHcCCCcccCCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCC
Confidence            777765432  2232 22358999999999999764443  78999999999997643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.62  E-value=1.1e-15  Score=119.77  Aligned_cols=104  Identities=27%  Similarity=0.382  Sum_probs=77.9

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++|+||+||++|+|++|++||...........+....
T Consensus       155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  234 (345)
T cd07877         155 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV  234 (345)
T ss_pred             CCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            4678999999986                           2567999999999999999999998766554444332211


Q ss_pred             C-----------------------CCCC----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCCc
Q psy14043         55 Y-----------------------SFPP----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT  105 (205)
Q Consensus        55 ~-----------------------~~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~  105 (205)
                      .                       ..+.    ......++++.+||.+||+.+|.+|+++.+++.|+|+.....+...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~  312 (345)
T cd07877         235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE  312 (345)
T ss_pred             CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCcc
Confidence            1                       0010    0112368899999999999999999999999999999876554433

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.62  E-value=2e-15  Score=116.71  Aligned_cols=96  Identities=24%  Similarity=0.384  Sum_probs=76.9

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++.                            +.++|+||+||++|+|++|.+||...+.......+...
T Consensus       156 ~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~  235 (313)
T cd06633         156 EPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  235 (313)
T ss_pred             CCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence            35789999999762                            44689999999999999999999887766655555543


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..  +......++..+++|+.+||+.+|.+||++.+++.|+|++..
T Consensus       236 ~~--~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         236 DS--PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             CC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            32  222223578899999999999999999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.62  E-value=1.5e-15  Score=117.20  Aligned_cols=96  Identities=26%  Similarity=0.388  Sum_probs=76.7

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++.                            +.++||||+||++|+|++|..||......+....+...
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  229 (308)
T cd06634         150 EPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  229 (308)
T ss_pred             CCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc
Confidence            35789999999762                            45789999999999999999999877665555555544


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...  .......+..+++||.+||..+|++||++.+++.|+|+...
T Consensus       230 ~~~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         230 ESP--ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             CCC--CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence            332  11223578999999999999999999999999999998663

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.62  E-value=2.5e-15  Score=111.98  Aligned_cols=92  Identities=28%  Similarity=0.428  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||.+.                            +.++|+||+|+++|+|++|..||...+..+....+...
T Consensus       133 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  212 (253)
T cd05122         133 SDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN  212 (253)
T ss_pred             cCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc
Confidence            36789999999772                            56799999999999999999999877555544444432


Q ss_pred             CC-CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         54 DY-SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        54 ~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .. ..+.  ...++.+++++|.+||..+|++||++.++++|||
T Consensus       213 ~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         213 GPPGLRN--PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             CCCCcCc--ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            22 1111  1124899999999999999999999999999997

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.62  E-value=1.3e-15  Score=114.33  Aligned_cols=91  Identities=29%  Similarity=0.467  Sum_probs=73.3

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESE---EETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~---~~~~~~i   50 (205)
                      +++.+||+|||.+.                            +.++|+||+||++|+|++|..||...+.   .......
T Consensus       135 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  214 (258)
T cd05578         135 EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ  214 (258)
T ss_pred             CCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh
Confidence            46789999999772                            6789999999999999999999987663   3333333


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc--ccccccchh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA--GQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~--~~~l~~~~~   96 (205)
                      .......+    ..+++++.++|.+||+.+|.+|++.  .++++||||
T Consensus       215 ~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         215 ETADVLYP----ATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             ccccccCc----ccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            32223333    3578999999999999999999999  999999996

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.62  E-value=2e-15  Score=113.23  Aligned_cols=92  Identities=28%  Similarity=0.416  Sum_probs=77.7

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||.+.                             +.++|+||+||++|+|++|..||...+..+....+..
T Consensus       136 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~  215 (256)
T cd08221         136 KAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ  215 (256)
T ss_pred             CCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            35789999999762                             5578999999999999999999998888887777776


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +......   ..++.++.+++.+||..+|.+||++.++++++|+
T Consensus       216 ~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         216 GNYTPVV---SVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             CCCCCCc---cccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            5543222   4679999999999999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.62  E-value=5.4e-16  Score=110.07  Aligned_cols=84  Identities=18%  Similarity=0.186  Sum_probs=60.7

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCCCCCCC---CcCCCCCH--HHHHHHHHhcccCcCCCCCcc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHISVADYSFPP---EQCGHISV--PARELIGQLLNTHADKRPTAG   88 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~---~~~~~~~~--~~~~li~~~l~~~p~~R~~~~   88 (205)
                      |+.++||||+||++|||++|+.||..... ...+..+.........   .....++.  ++++++.+||..+|.+||++.
T Consensus        81 ~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~  160 (176)
T smart00750       81 YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAAN  160 (176)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHH
Confidence            47899999999999999999999976533 2333333332222111   11112333  699999999999999999999


Q ss_pred             cccccchhhh
Q psy14043         89 QLLQVAWFAE   98 (205)
Q Consensus        89 ~~l~~~~~~~   98 (205)
                      ++++|+++..
T Consensus       161 ~ll~~~~~~~  170 (176)
T smart00750      161 HYLAHCRALF  170 (176)
T ss_pred             HHHHHHHHHH
Confidence            9999998753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.62  E-value=1.1e-15  Score=116.96  Aligned_cols=95  Identities=27%  Similarity=0.409  Sum_probs=72.6

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++.                              +.++|+||+||++|+|++|.+||...+..+....+.
T Consensus       141 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~  220 (293)
T cd07843         141 NRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIF  220 (293)
T ss_pred             CCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            35789999999762                              567999999999999999999998877665555443


Q ss_pred             hCCCC-----------CC---------------CCcCCC--CCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYS-----------FP---------------PEQCGH--ISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~-----------~~---------------~~~~~~--~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....           ++               ......  +++.++++|.+||+.+|++||++.+++.|+||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         221 KLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            21100           00               000111  58889999999999999999999999999996

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.62  E-value=1.6e-15  Score=116.76  Aligned_cols=81  Identities=20%  Similarity=0.309  Sum_probs=61.8

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC--------------------------CcCCCCCHHH
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--------------------------EQCGHISVPA   69 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~   69 (205)
                      +.++||||+||++|+|++|++||.+.+.......+.......+.                          ......++.+
T Consensus       205 ~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (311)
T cd07866         205 TTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEG  284 (311)
T ss_pred             CchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhH
Confidence            45799999999999999999999887776655554331110000                          0012355788


Q ss_pred             HHHHHHhcccCcCCCCCcccccccchh
Q psy14043         70 RELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        70 ~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .+||.+||..+|.+||++.+++.|+||
T Consensus       285 ~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         285 LDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            999999999999999999999999996

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.62  E-value=2.3e-15  Score=113.27  Aligned_cols=79  Identities=27%  Similarity=0.541  Sum_probs=60.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCCC-CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHISVADY-SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.++|+||+||++|++++|..||.... .......+..... .+|  ....+++.+.+||.+||+.+|++||++.+++.|
T Consensus       184 ~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         184 GRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             CcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            446899999999999999999997653 3333333333221 222  222458999999999999999999999999999


Q ss_pred             chh
Q psy14043         94 AWF   96 (205)
Q Consensus        94 ~~~   96 (205)
                      +|+
T Consensus       262 ~~~  264 (264)
T cd06626         262 PFV  264 (264)
T ss_pred             CCC
Confidence            995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.62  E-value=1.7e-15  Score=122.51  Aligned_cols=96  Identities=22%  Similarity=0.402  Sum_probs=69.2

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC--------CH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE--------SE   43 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~--------~~   43 (205)
                      ++.+||+|||++                               ++.++|||||||++|||++|..|+...        ..
T Consensus       296 ~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~  375 (461)
T PHA03211        296 PEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD  375 (461)
T ss_pred             CCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence            578999999987                               267899999999999999987655321        12


Q ss_pred             HHHHHHHHhCCCC---CC------------------------CCcC---CCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         44 EETRAHISVADYS---FP------------------------PEQC---GHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        44 ~~~~~~i~~~~~~---~~------------------------~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .++...+......   ++                        ...|   ..++.++++||.+||+.||.+||++.++++|
T Consensus       376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            3344444332211   11                        0001   1356789999999999999999999999999


Q ss_pred             chhhh
Q psy14043         94 AWFAE   98 (205)
Q Consensus        94 ~~~~~   98 (205)
                      +||..
T Consensus       456 p~f~~  460 (461)
T PHA03211        456 PLFQS  460 (461)
T ss_pred             cccCC
Confidence            99954

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.61  E-value=1.6e-15  Score=115.66  Aligned_cols=97  Identities=27%  Similarity=0.486  Sum_probs=77.7

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||.+                             ++.++|+||+||++|+|++|+.||...........+...
T Consensus       152 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~  231 (286)
T cd06614         152 DGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK  231 (286)
T ss_pred             CCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            678999999865                             267899999999999999999999887766655555443


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ... +......++.+++++|.+||+.+|.+||++.+++.|+|+....
T Consensus       232 ~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  277 (286)
T cd06614         232 GIP-PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC  277 (286)
T ss_pred             CCC-CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence            322 1112234789999999999999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.61  E-value=2.4e-15  Score=116.45  Aligned_cols=95  Identities=24%  Similarity=0.350  Sum_probs=77.2

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++|+||+||++|+|++|++||...........+...
T Consensus       160 ~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~  239 (317)
T cd06635         160 EPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  239 (317)
T ss_pred             CCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence            3578999999975                            255789999999999999999999887776666666554


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .....  ....+++.+++++.+||+.+|.+||++.++++|+|+..
T Consensus       240 ~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         240 ESPTL--QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             cCCCC--CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            33222  12357889999999999999999999999999999854

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.61  E-value=8e-16  Score=116.11  Aligned_cols=94  Identities=23%  Similarity=0.359  Sum_probs=70.7

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                                +.++|+||+||++|||++|+.||......+....
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~  220 (267)
T cd06646         141 DNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL  220 (267)
T ss_pred             CCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee
Confidence            35679999999761                                3469999999999999999999976554443333


Q ss_pred             HHhCCCCCCC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         50 ISVADYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        50 i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.......+. .....++..+++||.+||..+|++||++.++++|+|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         221 MSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             eecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            3332222221 112357899999999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.61  E-value=2.6e-15  Score=112.45  Aligned_cols=91  Identities=26%  Similarity=0.406  Sum_probs=76.1

Q ss_pred             CCeEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++.                           +.++|+||+|+++|+|++|+.||...+..+....+.....
T Consensus       139 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~  218 (256)
T cd08530         139 NDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY  218 (256)
T ss_pred             CCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence            5679999999762                           5689999999999999999999998887777666665443


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...   ....+.++++++.+||..+|++||++.++++||++
T Consensus       219 ~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         219 PPI---PPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCC---chhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            222   22678999999999999999999999999999874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0666|consensus

Probab=99.61  E-value=1.4e-15  Score=113.02  Aligned_cols=100  Identities=25%  Similarity=0.300  Sum_probs=75.2

Q ss_pred             CCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH------
Q psy14043          3 GAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE------   43 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~------   43 (205)
                      .|.+||+|||+|                                 |+.++|+|++|||+.||++-+|.|.+...      
T Consensus       172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~  251 (438)
T KOG0666|consen  172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKN  251 (438)
T ss_pred             cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCC
Confidence            499999999999                                 59999999999999999999999976421      


Q ss_pred             ---HHHHHHHHhCCCCCCCC---------------------c------------CCCCCHHHHHHHHHhcccCcCCCCCc
Q psy14043         44 ---EETRAHISVADYSFPPE---------------------Q------------CGHISVPARELIGQLLNTHADKRPTA   87 (205)
Q Consensus        44 ---~~~~~~i~~~~~~~~~~---------------------~------------~~~~~~~~~~li~~~l~~~p~~R~~~   87 (205)
                         .+++.+|.+..-.....                     .            +..-++.+.+|+.++|+.||.+|+++
T Consensus       252 Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta  331 (438)
T KOG0666|consen  252 PFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA  331 (438)
T ss_pred             CchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH
Confidence               23444443311000000                     0            01235668999999999999999999


Q ss_pred             ccccccchhhhcccC
Q psy14043         88 GQLLQVAWFAEIAIP  102 (205)
Q Consensus        88 ~~~l~~~~~~~~~~~  102 (205)
                      ++.++|+||..-..+
T Consensus       332 ~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  332 EQALEHPYFTEDPLP  346 (438)
T ss_pred             HHHhcccccccCCCC
Confidence            999999999876554

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.61  E-value=3.8e-16  Score=117.22  Aligned_cols=95  Identities=36%  Similarity=0.637  Sum_probs=72.4

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE---ETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~---~~~~   48 (205)
                      +++.++|+|||.+                              ++.++|+||+|+++|+|++|..||......   ....
T Consensus       133 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~  212 (260)
T PF00069_consen  133 ENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIE  212 (260)
T ss_dssp             TTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence            4788999999987                              288999999999999999999999877333   3333


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .................++.++++|.+||+.+|++||++.++++||||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  213 KILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             hcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            333222221211111234899999999999999999999999999996

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0670|consensus

Probab=99.61  E-value=7.1e-17  Score=127.01  Aligned_cols=95  Identities=27%  Similarity=0.409  Sum_probs=77.2

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ...+||||||.|                           |+...|+||+||+||||.||+..|+|.++.+++........
T Consensus       573 k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG  652 (752)
T KOG0670|consen  573 KNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG  652 (752)
T ss_pred             cceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence            467999999998                           69999999999999999999999999999888777654433


Q ss_pred             CCCCCcC--------------------------------------------------------CCCCHHHHHHHHHhccc
Q psy14043         56 SFPPEQC--------------------------------------------------------GHISVPARELIGQLLNT   79 (205)
Q Consensus        56 ~~~~~~~--------------------------------------------------------~~~~~~~~~li~~~l~~   79 (205)
                      .+|....                                                        ..+-..+++|+.+||..
T Consensus       653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L  732 (752)
T KOG0670|consen  653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL  732 (752)
T ss_pred             CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence            3332100                                                        00124778999999999


Q ss_pred             CcCCCCCcccccccchhh
Q psy14043         80 HADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        80 ~p~~R~~~~~~l~~~~~~   97 (205)
                      ||++|+++.+.|.||||.
T Consensus       733 dP~KRit~nqAL~HpFi~  750 (752)
T KOG0670|consen  733 DPEKRITVNQALKHPFIT  750 (752)
T ss_pred             ChhhcCCHHHHhcCCccc
Confidence            999999999999999985

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.61  E-value=2.5e-15  Score=114.15  Aligned_cols=95  Identities=26%  Similarity=0.405  Sum_probs=77.4

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.++|+|||++.                             +.++|+||+||++|+|++|..||...........+..
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  215 (277)
T cd06641         136 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK  215 (277)
T ss_pred             CCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc
Confidence            46789999999771                             5679999999999999999999987766665555544


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ....   .....++.++.+++.+||+.+|++||++.++++|+|+...
T Consensus       216 ~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         216 NNPP---TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             CCCC---CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence            3221   2223578999999999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.61  E-value=1.5e-15  Score=115.62  Aligned_cols=95  Identities=27%  Similarity=0.447  Sum_probs=72.4

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++|+||+||++|+|++|++||.+.+..+....+.
T Consensus       135 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~  214 (284)
T cd07836         135 KRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIF  214 (284)
T ss_pred             CCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            4578999999866                              1567999999999999999999998877665544443


Q ss_pred             hCCC------------------CCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADY------------------SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~------------------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ....                  ..+.       ......++++++++.+||+.+|.+||+..++++||||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         215 RIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            2100                  0000       0012357889999999999999999999999999996

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.61  E-value=2.2e-15  Score=115.69  Aligned_cols=95  Identities=33%  Similarity=0.471  Sum_probs=73.7

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+.                               +.++||||+||++|+|++|++||...+..+.+..+
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~  230 (302)
T cd07864         151 NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI  230 (302)
T ss_pred             CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            46789999999761                               56799999999999999999999877666555555


Q ss_pred             HhCCCCCCC--------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADYSFPP--------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .......+.                          .....+++.+.+++.+||..+|++||++.+++.|+|+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            432110000                          1122468999999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG2345|consensus

Probab=99.61  E-value=2.2e-16  Score=113.71  Aligned_cols=76  Identities=32%  Similarity=0.497  Sum_probs=60.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDE--SEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.++|||||||++|+|+.|.-||.-.  ....+.-.+.++.+.+|...  .++....++|+.||+.||.+||+..+++.+
T Consensus       219 ~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  219 TERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            89999999999999999999999532  11123334455566666543  489999999999999999999999887653

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.61  E-value=2.9e-15  Score=112.26  Aligned_cols=78  Identities=27%  Similarity=0.448  Sum_probs=64.3

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|+||+||++|+|++|..||...+..+....+......   ......+.+++++|.+||..+|++||++.+++.|||
T Consensus       180 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~  256 (257)
T cd08225         180 NNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA---PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPF  256 (257)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC---CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence            56799999999999999999999877766665555543322   112357889999999999999999999999999999


Q ss_pred             h
Q psy14043         96 F   96 (205)
Q Consensus        96 ~   96 (205)
                      +
T Consensus       257 ~  257 (257)
T cd08225         257 L  257 (257)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.61  E-value=2.5e-15  Score=113.99  Aligned_cols=77  Identities=35%  Similarity=0.652  Sum_probs=66.9

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc----cccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA----GQLL   91 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~----~~~l   91 (205)
                      +.++|+||+||++|++++|..||...+....+..+......++.    .+++.+.+||.+||..+|++||++    .+++
T Consensus       200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll  275 (280)
T cd05581         200 GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK  275 (280)
T ss_pred             ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence            44799999999999999999999988777777776665555554    579999999999999999999999    9999


Q ss_pred             ccchh
Q psy14043         92 QVAWF   96 (205)
Q Consensus        92 ~~~~~   96 (205)
                      +||||
T Consensus       276 ~~~~~  280 (280)
T cd05581         276 AHPFF  280 (280)
T ss_pred             cCCCC
Confidence            99996

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG4721|consensus

Probab=99.61  E-value=2.8e-16  Score=125.04  Aligned_cols=89  Identities=26%  Similarity=0.436  Sum_probs=76.7

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +.+|||+|||.+                            ++.|+||||+||||+|||||..||...+...++..+-.+.
T Consensus       248 ~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNs  327 (904)
T KOG4721|consen  248 DDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNS  327 (904)
T ss_pred             cceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCc
Confidence            568999999999                            3999999999999999999999998877777776666555


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+|-  +..+++.++-|++.||.-.|.+||++.+++.|
T Consensus       328 L~Lpv--PstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  328 LHLPV--PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             ccccC--cccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence            54443  34689999999999999999999999999987

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.61  E-value=1.9e-15  Score=115.18  Aligned_cols=95  Identities=31%  Similarity=0.498  Sum_probs=71.8

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                               ++.++|+||+||++|+|++|++||.+....+.+..+
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~  214 (288)
T cd07833         135 ESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLI  214 (288)
T ss_pred             CCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            3678999999975                               256799999999999999999999877665544443


Q ss_pred             HhCCCC-------------------CCCC---------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADYS-------------------FPPE---------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~-------------------~~~~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ......                   ++..         ....+++++++||.+||..+|++||++.+++.|+||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         215 QKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             HHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            321100                   0000         011348899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG1006|consensus

Probab=99.61  E-value=4.7e-16  Score=113.23  Aligned_cols=101  Identities=25%  Similarity=0.378  Sum_probs=83.3

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-~~~~~~~~i~   51 (205)
                      .|.+||||||++                              |+-++|+||||+++||+.||..||.+- +..+++..+.
T Consensus       204 ~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv  283 (361)
T KOG1006|consen  204 HGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV  283 (361)
T ss_pred             CCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH
Confidence            488999999998                              588999999999999999999999763 4556777777


Q ss_pred             hCCCCCCCCc--CCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         52 VADYSFPPEQ--CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        52 ~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      .+.++.....  .-+.+.....||..||.+|-+.||...+++.++|++......
T Consensus       284 ~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~  337 (361)
T KOG1006|consen  284 IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG  337 (361)
T ss_pred             cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence            7766443222  235889999999999999999999999999999987765433

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.61  E-value=2e-15  Score=114.05  Aligned_cols=92  Identities=29%  Similarity=0.554  Sum_probs=69.6

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|+||+||++|+|++|.+||...... .....+
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~  224 (268)
T cd06624         145 SGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV  224 (268)
T ss_pred             CCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh
Confidence            568999999975                               256799999999999999999999754322 122221


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..  ....+..+..+++++++|+.+||..+|++||++.+++.|||+
T Consensus       225 ~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         225 GM--FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             hh--hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            11  111112233688999999999999999999999999999996

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.61  E-value=2.3e-15  Score=115.10  Aligned_cols=95  Identities=26%  Similarity=0.424  Sum_probs=68.7

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++||||+||++|+|++|++||.+.. ..+....+
T Consensus       138 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~  217 (291)
T cd07844         138 ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI  217 (291)
T ss_pred             CCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence            3578999999965                              2567899999999999999999997654 33333322


Q ss_pred             HhCCC-------------------CCC----C---CcCCCCC--HHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADY-------------------SFP----P---EQCGHIS--VPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~-------------------~~~----~---~~~~~~~--~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....                   ..+    .   .....++  .++.+++.+||+.+|++||++.++++|+||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         218 FRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             HHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            21100                   000    0   0011234  888999999999999999999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.61  E-value=2e-15  Score=117.84  Aligned_cols=87  Identities=23%  Similarity=0.368  Sum_probs=68.0

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEE-TRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~-~~~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|||++ |..||.+....+ ....
T Consensus       210 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~  289 (338)
T cd05102         210 NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR  289 (338)
T ss_pred             CCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH
Confidence            578999999977                               2678999999999999997 999998755433 3344


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+....   .+...++++++++.+||..+|++||++.++++
T Consensus       290 ~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         290 LKDGTRMR---APENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HhcCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            44333221   12367899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.60  E-value=3.1e-15  Score=117.14  Aligned_cols=99  Identities=21%  Similarity=0.331  Sum_probs=76.4

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++|+||+||++|++++|.+||.+.+.......+....
T Consensus       153 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~  232 (343)
T cd07880         153 EDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT  232 (343)
T ss_pred             CCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            4678999999977                           2457999999999999999999998776655444433221


Q ss_pred             CCCC---------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 YSFP---------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 ~~~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ...+                           ......+++++.++|.+||..+|++||++.+++.|+||....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence            1100                           011235788999999999999999999999999999998754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0574|consensus

Probab=99.60  E-value=6.1e-17  Score=119.91  Aligned_cols=96  Identities=21%  Similarity=0.294  Sum_probs=79.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|+.||+|||.|                             |+.++||||||+...||..|++||....+...+..|-.
T Consensus       164 T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT  243 (502)
T KOG0574|consen  164 TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT  243 (502)
T ss_pred             ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC
Confidence            3688999999999                             69999999999999999999999988777655555443


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .+++ ....+..++.++.|||++||.++|++|.++.++++|+|+++
T Consensus       244 ~PPP-TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  244 KPPP-TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKN  288 (502)
T ss_pred             CCCC-CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence            3221 11223468999999999999999999999999999999965

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.60  E-value=3.2e-15  Score=113.10  Aligned_cols=88  Identities=17%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|||++ |+.||.+....+....+
T Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  227 (272)
T cd05075         148 NMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYL  227 (272)
T ss_pred             CCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            5789999999862                               567999999999999999 89999888777777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+.....   ...++..++++|.+||+.+|++||++.++++.
T Consensus       228 ~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         228 RQGNRLKQ---PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HcCCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            76543211   23578999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.60  E-value=3.6e-15  Score=111.59  Aligned_cols=91  Identities=32%  Similarity=0.484  Sum_probs=76.5

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||.+.                             +.++|+||+|+++|+|++|+.||......+....+...
T Consensus       139 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~  218 (258)
T cd08215         139 NGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG  218 (258)
T ss_pred             CCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC
Confidence            5789999999762                             56899999999999999999999888777776666654


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ....   ....++.++++++.+||..+|++||++.++++|||+
T Consensus       219 ~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         219 QYPP---IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            4322   223688999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.60  E-value=3.6e-15  Score=112.01  Aligned_cols=88  Identities=22%  Similarity=0.299  Sum_probs=72.0

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++.                                +.++|+|||||++|||++ |++||......+...
T Consensus       130 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~  209 (257)
T cd05116         130 TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQ  209 (257)
T ss_pred             CCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            35679999999872                                447999999999999998 999998887777777


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+.++....   .+..+++++.++|.+||+.+|++||++.++.+
T Consensus       210 ~i~~~~~~~---~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         210 MIESGERME---CPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHHCCCCCC---CCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            777654321   22368999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0608|consensus

Probab=99.60  E-value=4.1e-16  Score=125.48  Aligned_cols=86  Identities=31%  Similarity=0.438  Sum_probs=68.7

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC---Ccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP---TAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~l~   92 (205)
                      ++.+|+||+|||||||+.|++||...+..+...+|.+.+..+.-....++++++.++|.++ ..+++.|+   .+.++..
T Consensus       849 ~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kL-c~sad~RLGkng~d~vKa  927 (1034)
T KOG0608|consen  849 TQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKL-CCSADSRLGKNGADQVKA  927 (1034)
T ss_pred             cccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHH-hcChhhhhcccchhhhhc
Confidence            8899999999999999999999998888777777766554444334458999999999985 45688886   3566999


Q ss_pred             cchhhhcccC
Q psy14043         93 VAWFAEIAIP  102 (205)
Q Consensus        93 ~~~~~~~~~~  102 (205)
                      ||||+.+...
T Consensus       928 HpfFkgIDfs  937 (1034)
T KOG0608|consen  928 HPFFKGIDFS  937 (1034)
T ss_pred             CccccccchH
Confidence            9999876543

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.60  E-value=3.8e-15  Score=111.66  Aligned_cols=93  Identities=28%  Similarity=0.448  Sum_probs=73.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||.+                             ++.++|+||+||++|+|++|++||......+....+..
T Consensus       137 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  216 (258)
T cd06632         137 TNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR  216 (258)
T ss_pred             CCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh
Confidence            4678999999966                             24579999999999999999999977665544444443


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...  .......+++++++++.+||..+|++||++.+++.|||+
T Consensus       217 ~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         217 SKE--LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             ccc--CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            111  112233578999999999999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.60  E-value=4e-15  Score=116.06  Aligned_cols=85  Identities=26%  Similarity=0.324  Sum_probs=65.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC-----CCC-------------------CcCCCCCHHHHH
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS-----FPP-------------------EQCGHISVPARE   71 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----~~~-------------------~~~~~~~~~~~~   71 (205)
                      +.++|+||+||++|+|++|++||.+.+..+.+..+......     ++.                   ......+.++.+
T Consensus       212 ~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
T PTZ00024        212 HFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAID  291 (335)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHH
Confidence            56799999999999999999999988776666555431110     000                   011245788999


Q ss_pred             HHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         72 LIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        72 li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +|.+||..+|++||++.+++.|+|+....
T Consensus       292 li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        292 LLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             HHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            99999999999999999999999997654

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.60  E-value=4.5e-15  Score=113.15  Aligned_cols=95  Identities=25%  Similarity=0.391  Sum_probs=72.4

Q ss_pred             CCCeEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH----------
Q psy14043          2 NGAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE----------   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~----------   44 (205)
                      +++.++|+|||++.                           +.++|+||+||++|+|++|..||......          
T Consensus       139 ~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~  218 (284)
T cd06620         139 SRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI  218 (284)
T ss_pred             CCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHH
Confidence            45789999999762                           66899999999999999999999764431          


Q ss_pred             -HHHHHHHhCCC-CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         45 -ETRAHISVADY-SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        45 -~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                       +....+..... .++.   ..++.++.+|+.+||..+|++||++.++++|+|+...
T Consensus       219 ~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         219 LDLLQQIVQEPPPRLPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHhhccCCCCCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence             22233332211 1111   2378899999999999999999999999999998553

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.60  E-value=3.4e-15  Score=113.42  Aligned_cols=94  Identities=26%  Similarity=0.442  Sum_probs=72.7

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.+||+|||.+.                              +.++|+||+||++||+++|.+||.+.+..+.+..+..
T Consensus       134 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~  213 (282)
T cd07829         134 DGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQ  213 (282)
T ss_pred             CCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHH
Confidence            5789999999862                              5579999999999999999999988776655544432


Q ss_pred             CC------------------CCCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 AD------------------YSFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~------------------~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..                  ..++.       ......+..+.++|.+||..+|++||++.+++.||||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         214 ILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            10                  00000       1112357899999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.59  E-value=3.5e-15  Score=112.84  Aligned_cols=89  Identities=19%  Similarity=0.303  Sum_probs=73.3

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                               +.++||||+||++|||++ |.+||.+....+.+..
T Consensus       148 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~  227 (273)
T cd05035         148 EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY  227 (273)
T ss_pred             CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            35689999999972                               567999999999999999 9999988888777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +..+....   ....+++++.+++.+||+.+|++||++.+++++
T Consensus       228 ~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         228 LRHGNRLK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHcCCCCC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            76553321   223689999999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.59  E-value=3.2e-15  Score=112.77  Aligned_cols=82  Identities=24%  Similarity=0.393  Sum_probs=61.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA-DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      +.++|+||+||++|+|++|..||...........+... ...........+++++.+++.+||..+|++||++.+++.||
T Consensus       186 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~  265 (268)
T cd06630         186 GRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP  265 (268)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence            56789999999999999999999754433222222211 11112223336789999999999999999999999999999


Q ss_pred             hhh
Q psy14043         95 WFA   97 (205)
Q Consensus        95 ~~~   97 (205)
                      |++
T Consensus       266 ~~~  268 (268)
T cd06630         266 VFR  268 (268)
T ss_pred             ccC
Confidence            973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.59  E-value=4.6e-15  Score=112.68  Aligned_cols=75  Identities=21%  Similarity=0.392  Sum_probs=61.5

Q ss_pred             CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.++|||||||++|||++ |..||.+.+..+....+.......   ....++..+.+++.+||+.+|++||++.++++|
T Consensus       199 ~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         199 TSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLD---PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            567999999999999997 999999888777766665432211   123578999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.59  E-value=2.1e-15  Score=115.54  Aligned_cols=97  Identities=26%  Similarity=0.455  Sum_probs=75.2

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++                             ++.++|+||+||++|++++|+.||...+.......+...
T Consensus       151 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~  230 (293)
T cd06647         151 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN  230 (293)
T ss_pred             CCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC
Confidence            567999999965                             256799999999999999999999877655444433322


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ... .......++..++++|.+||..+|++||++.+++.|+|+....
T Consensus       231 ~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         231 GTP-ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             CCC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            211 1112235788999999999999999999999999999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.59  E-value=4.3e-15  Score=115.65  Aligned_cols=103  Identities=22%  Similarity=0.343  Sum_probs=75.9

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA-   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~-   53 (205)
                      +++.+||+|||.+                           ++.++|+||+||++|+|++|++||.+.........+... 
T Consensus       143 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~  222 (328)
T cd07856         143 ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLL  222 (328)
T ss_pred             CCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            3578999999976                           266799999999999999999999876553332222110 


Q ss_pred             -----------------------C--CCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCC
Q psy14043         54 -----------------------D--YSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNN  104 (205)
Q Consensus        54 -----------------------~--~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  104 (205)
                                             .  ...+ .......++.++++|.+||+.+|++||++.+++.|+|+.....+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~  299 (328)
T cd07856         223 GTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTD  299 (328)
T ss_pred             CCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcc
Confidence                                   0  0001 0112346889999999999999999999999999999976554443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.59  E-value=1.3e-15  Score=118.68  Aligned_cols=85  Identities=33%  Similarity=0.559  Sum_probs=66.3

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~   92 (205)
                      +.++|+||+||++|+|++|+.||.+.+..+.+..+......++ +.....++++++++|.+||...+.+  |+++.++++
T Consensus       186 ~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         186 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             CCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            3578999999999999999999998888777777765443222 1223457999999999999876544  468899999


Q ss_pred             cchhhhcc
Q psy14043         93 VAWFAEIA  100 (205)
Q Consensus        93 ~~~~~~~~  100 (205)
                      |+|+....
T Consensus       266 h~~f~~~~  273 (331)
T cd05624         266 HAFFEGID  273 (331)
T ss_pred             CCCcCCCC
Confidence            99997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.59  E-value=4.2e-15  Score=114.09  Aligned_cols=88  Identities=25%  Similarity=0.349  Sum_probs=72.9

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++                            ++.++|||||||++|||++ |..||.+....+....+...
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~  234 (297)
T cd05089         155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  234 (297)
T ss_pred             CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence            567999999986                            2678999999999999997 99999988887777776654


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ...   .....+++.+++|+.+||..+|.+||++.++++.
T Consensus       235 ~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         235 YRM---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            321   1223588999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.59  E-value=5.4e-15  Score=112.57  Aligned_cols=88  Identities=22%  Similarity=0.291  Sum_probs=73.5

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++||||+||++|||++ |.+||.+....+....+
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05091         160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI  239 (283)
T ss_pred             CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            567999999975                               2667999999999999998 99999988888888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........   ...++..+.+++.+||+.+|.+||++.++++.
T Consensus       240 ~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         240 RNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            76654322   23689999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0193|consensus

Probab=99.59  E-value=8.3e-16  Score=122.76  Aligned_cols=91  Identities=18%  Similarity=0.276  Sum_probs=77.3

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.|||+|||++                                  |++++||||+|||+|||++|..||......+++
T Consensus       523 ~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi  602 (678)
T KOG0193|consen  523 EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII  602 (678)
T ss_pred             cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE
Confidence            4689999999999                                  599999999999999999999999977777788


Q ss_pred             HHHHhCCCCCCC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         48 AHISVADYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        48 ~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      -++-++...... ....+.+++++.|+..||.+++++||.+.+++.
T Consensus       603 fmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  603 FMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             EEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            887777443322 223467789999999999999999999999876

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.59  E-value=5.9e-15  Score=111.25  Aligned_cols=88  Identities=22%  Similarity=0.358  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++.                              +.++|||||||++|||++ |..||.+....+....+
T Consensus       139 ~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~  218 (263)
T cd05052         139 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  218 (263)
T ss_pred             CCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            45789999999762                              557999999999999998 99999988887777776


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .....   ......+++++.+++.+||..+|++||++.++.+
T Consensus       219 ~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         219 EKGYR---MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HCCCC---CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            65422   1223468999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.59  E-value=5.5e-15  Score=110.99  Aligned_cols=88  Identities=23%  Similarity=0.336  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++.                                +.++|+|||||++|+|++ |.+||...+..+...
T Consensus       130 ~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~  209 (257)
T cd05060         130 NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIA  209 (257)
T ss_pred             CCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            35789999999872                                557999999999999998 999998888777777


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+......   .....+++.++++|.+||..+|++||++.++.+
T Consensus       210 ~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         210 MLESGERL---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHcCCcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            77655432   222367899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0192|consensus

Probab=99.59  E-value=5.5e-15  Score=115.38  Aligned_cols=88  Identities=23%  Similarity=0.363  Sum_probs=73.9

Q ss_pred             CC-eEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          3 GA-VLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~-~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      ++ ++||+|||++                               |+.|+||||+|+++|||+||+.||.+....+....+
T Consensus       179 ~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v  258 (362)
T KOG0192|consen  179 KGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV  258 (362)
T ss_pred             CCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            44 8999999999                               378999999999999999999999998887777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .....+.+.  +...++.+..++.+||..+|+.||++.++..
T Consensus       259 ~~~~~Rp~~--p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  259 VVGGLRPPI--PKECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HhcCCCCCC--CccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            644433222  2248999999999999999999999988765

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.58  E-value=5.2e-15  Score=115.09  Aligned_cols=86  Identities=23%  Similarity=0.344  Sum_probs=63.1

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC-------C-----------------------------
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF-------P-----------------------------   58 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------~-----------------------------   58 (205)
                      |+.++||||+||++|||++|+.||......+..........+.       +                             
T Consensus       187 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (327)
T cd08227         187 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPS  266 (327)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCcc
Confidence            3578999999999999999999998655444333322221110       0                             


Q ss_pred             ------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         59 ------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        59 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                            ......+++++++|+.+||+.||++||++.++++|||+....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         267 NGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             ccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence                  001123577899999999999999999999999999997643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.58  E-value=6e-15  Score=112.71  Aligned_cols=88  Identities=20%  Similarity=0.306  Sum_probs=73.2

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++|+||+||++|+|++ |.+||.+....+....
T Consensus       155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~  234 (288)
T cd05093         155 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC  234 (288)
T ss_pred             cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3678999999976                               2668999999999999998 9999988888777778


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+.....   ....++++.+|+.+||+.+|.+||++.++..
T Consensus       235 i~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         235 ITQGRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHcCCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            776654222   2357899999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.58  E-value=5.5e-15  Score=110.93  Aligned_cols=88  Identities=22%  Similarity=0.345  Sum_probs=72.6

Q ss_pred             CCCeEEEEecCCCC--------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++.                          +.++||||+||++|+|++ |+.||......+....+.+..
T Consensus       137 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~  216 (256)
T cd05082         137 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY  216 (256)
T ss_pred             CCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC
Confidence            46789999999872                          667999999999999997 999998887777777776543


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..   .....+++.+++++.+|+..+|++||++.++.+
T Consensus       217 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         217 KM---DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             CC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            22   222468999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.58  E-value=6.1e-15  Score=120.85  Aligned_cols=98  Identities=23%  Similarity=0.285  Sum_probs=68.1

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCC-CCCCC--CHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVS-PFLDE--SEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~-pf~~~--~~~~~~~   48 (205)
                      .++.+||+|||++                              |+.++||||+||++|||++|.. ||...  .....+.
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~  381 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL  381 (501)
T ss_pred             CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence            3678999999998                              2678999999999999999765 44322  2222222


Q ss_pred             HHHhC-C---CCCCCC------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         49 HISVA-D---YSFPPE------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        49 ~i~~~-~---~~~~~~------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+... .   ..++..                        ....++.++.++|.+||+.||.+||++.++++||||...
T Consensus       382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            22211 0   001100                        011356788899999999999999999999999999654

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.58  E-value=5.5e-15  Score=113.06  Aligned_cols=88  Identities=18%  Similarity=0.317  Sum_probs=72.7

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                               +.++|+||+||++|||++ |+.||...+..+....
T Consensus       158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  237 (291)
T cd05094         158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC  237 (291)
T ss_pred             cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            36789999999871                               667999999999999998 9999988877777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+.....   ....+..+++++.+||+.+|++||++.++++
T Consensus       238 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         238 ITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            665544322   2357899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.58  E-value=6.4e-15  Score=111.11  Aligned_cols=91  Identities=25%  Similarity=0.423  Sum_probs=71.3

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                                +.++|+||+||++|+|++|+.||...........+
T Consensus       142 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  221 (265)
T cd06652         142 VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKI  221 (265)
T ss_pred             CCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHH
Confidence            5789999999661                                56789999999999999999999876555544444


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....  .+..+...+..+.++|.+|+. +|.+||++.++++|+|+
T Consensus       222 ~~~~~--~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~  264 (265)
T cd06652         222 ATQPT--NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV  264 (265)
T ss_pred             hcCCC--CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence            43221  112233578899999999995 89999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.58  E-value=3.2e-15  Score=112.10  Aligned_cols=89  Identities=31%  Similarity=0.499  Sum_probs=73.7

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.++++|||.+.                             +.++|+||+|+++|+|++|..||...+.......+..
T Consensus       135 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~  214 (255)
T cd08219         135 QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ  214 (255)
T ss_pred             CCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc
Confidence            36789999999872                             5679999999999999999999998887777777766


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.....+   ..++..+++||.+||..+|++||++.+++.-
T Consensus       215 ~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         215 GSYKPLP---SHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCCCCC---cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            5443222   3578999999999999999999999988753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.58  E-value=6.7e-15  Score=111.74  Aligned_cols=88  Identities=18%  Similarity=0.264  Sum_probs=72.2

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|+|||||++|||++ |.+||.+.+..+....+
T Consensus       155 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~  234 (277)
T cd05062         155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV  234 (277)
T ss_pred             CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            578999999976                               2667999999999999999 79999988887777766


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........   ....+..+++++.+||+.+|++||++.+++++
T Consensus       235 ~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         235 MEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            65443222   23578899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=9.1e-15  Score=109.29  Aligned_cols=91  Identities=31%  Similarity=0.504  Sum_probs=73.9

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||.+.                             +.++|+|++|+++|+|++|..||...........+...
T Consensus       135 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  214 (254)
T cd06627         135 DGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD  214 (254)
T ss_pred             CCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence            5789999999772                             56799999999999999999999876655555444433


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...   .....++..+++++.+||..+|++||++.+++.|+||
T Consensus       215 ~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         215 DHP---PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CCC---CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            221   1223678999999999999999999999999999986

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.57  E-value=3.9e-15  Score=113.68  Aligned_cols=95  Identities=34%  Similarity=0.540  Sum_probs=72.7

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCC----HHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDES----EEET   46 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~----~~~~   46 (205)
                      ++.+||+|||++.                                +.++|+||+|+++|+|++|..||....    ..+.
T Consensus       141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~  220 (288)
T cd05583         141 EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEI  220 (288)
T ss_pred             CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHH
Confidence            5789999999762                                457899999999999999999996432    2333


Q ss_pred             HHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc---ccccccchhhhccc
Q psy14043         47 RAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA---GQLLQVAWFAEIAI  101 (205)
Q Consensus        47 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~l~~~~~~~~~~  101 (205)
                      ...+.......+    ..+++++++++.+||+.+|++||++   .++++|+|+....+
T Consensus       221 ~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         221 SRRILKSKPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HHHHHccCCCCC----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence            334443333333    3578999999999999999999985   56799999977654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.57  E-value=7.7e-15  Score=111.65  Aligned_cols=88  Identities=20%  Similarity=0.332  Sum_probs=71.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++|||||||++|||++ |.+||......+....
T Consensus       157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  236 (280)
T cd05092         157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC  236 (280)
T ss_pred             CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH
Confidence            3578999999976                               1667999999999999998 9999988777777776


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.......   ....+++.+++++.+||+.+|.+||++.++.+
T Consensus       237 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         237 ITQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            66554321   22368899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.57  E-value=5e-15  Score=114.43  Aligned_cols=85  Identities=20%  Similarity=0.310  Sum_probs=61.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHhCCCC-----------------------------CCCCcCCCC
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETR-AHISVADYS-----------------------------FPPEQCGHI   65 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~-~~i~~~~~~-----------------------------~~~~~~~~~   65 (205)
                      +.++|+||+||++|||++|+.||......... ..+......                             .+......+
T Consensus       188 ~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (314)
T cd08216         188 NEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTF  267 (314)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHH
Confidence            56799999999999999999999865544332 222211000                             000001123


Q ss_pred             CHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         66 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        66 ~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +.++.+|+.+||+.+|++||++.++++|||+....
T Consensus       268 ~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         268 SEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             HHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            57889999999999999999999999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.57  E-value=9.2e-15  Score=111.33  Aligned_cols=88  Identities=22%  Similarity=0.360  Sum_probs=72.2

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|||++ |.+||.+....+....+
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~  239 (283)
T cd05090         160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV  239 (283)
T ss_pred             CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            5679999999872                               668999999999999998 99999887777776666


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .......   .+..+++++++++.+||+.+|.+||++.+++++
T Consensus       240 ~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         240 RKRQLLP---CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            6544321   223689999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.57  E-value=8.7e-15  Score=111.90  Aligned_cols=95  Identities=25%  Similarity=0.321  Sum_probs=67.9

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i   50 (205)
                      .++.+||+|||++.                              +.++|+||+||++|+|++|..||.+... .+.+..+
T Consensus       138 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~  217 (291)
T cd07870         138 YLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKI  217 (291)
T ss_pred             CCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHH
Confidence            35789999999762                              4568999999999999999999976543 2222222


Q ss_pred             HhCCC--------------C-----C----CC---CcC--CCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADY--------------S-----F----PP---EQC--GHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~--------------~-----~----~~---~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....              .     .    +.   ..+  ...++++.+++.+||..+|.+||++.+++.||||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         218 WTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             HHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            11000              0     0    00   000  0136789999999999999999999999999996

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.57  E-value=1e-14  Score=109.42  Aligned_cols=88  Identities=28%  Similarity=0.478  Sum_probs=73.2

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      .++.+||+|||.+.                              +.++|+||+||++|+|++ |+.||...+..+....+
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i  214 (256)
T cd05114         135 STGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI  214 (256)
T ss_pred             CCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            35789999999662                              567999999999999999 99999988888888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .++.....+   ...+.++.+++.+||..+|++||++.++++
T Consensus       215 ~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         215 SRGFRLYRP---KLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HCCCCCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            765433222   246889999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.57  E-value=1e-14  Score=111.45  Aligned_cols=94  Identities=23%  Similarity=0.347  Sum_probs=74.9

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++|+||+||++|||++ |.+||.+....+....
T Consensus       154 ~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~  233 (288)
T cd05061         154 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF  233 (288)
T ss_pred             CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3578999999975                               2677899999999999998 8999988887777776


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc------cchhhh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ------VAWFAE   98 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~------~~~~~~   98 (205)
                      +........   ....++.+++++.+||+.+|++||++.++++      ||++..
T Consensus       234 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         234 VMDGGYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             HHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            665433211   1256899999999999999999999999875      565544

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.57  E-value=5.5e-15  Score=112.96  Aligned_cols=95  Identities=32%  Similarity=0.568  Sum_probs=73.9

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCC----HHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDES----EEE   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~----~~~   45 (205)
                      +++.+||+|||++.                                +.++|+||+||++|+|++|..||....    ..+
T Consensus       140 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~  219 (290)
T cd05613         140 SNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAE  219 (290)
T ss_pred             CCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHH
Confidence            46789999999762                                357999999999999999999996432    233


Q ss_pred             HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         46 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        46 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....+......++    ..+++.+.+++.+||+.+|++|+     ++.+++.|+|+....
T Consensus       220 ~~~~~~~~~~~~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         220 ISRRILKSEPPYP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHHhhccCCCCC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            3444443333333    35889999999999999999997     789999999997754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.57  E-value=9.7e-15  Score=109.69  Aligned_cols=89  Identities=27%  Similarity=0.423  Sum_probs=72.9

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+                              ++.++|+|||||++|+|++ |..||...+..+....+
T Consensus       135 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~  214 (256)
T cd05113         135 DQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV  214 (256)
T ss_pred             CCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence            3578999999976                              2667999999999999998 99999887777777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+.......   ...+..+++++.+||..+|.+||++.+++.+
T Consensus       215 ~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         215 SQGLRLYRP---HLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             hcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            665443222   2468999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG1095|consensus

Probab=99.57  E-value=5.2e-15  Score=126.05  Aligned_cols=86  Identities=24%  Similarity=0.440  Sum_probs=74.8

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ..++||+|||+|.                               +.|+|||||||++||+++ |..||.+.++.+++...
T Consensus       838 ~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~  917 (1025)
T KOG1095|consen  838 RRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDV  917 (1025)
T ss_pred             cCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHH
Confidence            4689999999992                               999999999999999999 99999999999988855


Q ss_pred             HhCC-CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVAD-YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+- ...|    ..++..+++++..||+.+|++||++..+++
T Consensus       918 ~~ggRL~~P----~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  918 LEGGRLDPP----SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HhCCccCCC----CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            5443 3333    379999999999999999999999998876

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.57  E-value=9.3e-15  Score=109.30  Aligned_cols=92  Identities=32%  Similarity=0.560  Sum_probs=71.6

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i   50 (205)
                      ++.+||+|||.+.                               +.++|+||+|+++|+|++|..||.... .......+
T Consensus       137 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  216 (260)
T cd06606         137 DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKI  216 (260)
T ss_pred             CCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhc
Confidence            5789999999662                               567999999999999999999997765 33333333


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .....  ........+..+++||.+|+..+|++||++.++++|||+
T Consensus       217 ~~~~~--~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         217 GSSGE--PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             cccCC--CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            32111  112233578999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.57  E-value=8.3e-15  Score=112.35  Aligned_cols=72  Identities=11%  Similarity=0.096  Sum_probs=55.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCH-HH--------HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESE-EE--------TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT   86 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~   86 (205)
                      +.++||||+||++|||++|++||.+... .+        ....+.......     ...++.+.+++..|+..+|++||+
T Consensus       211 ~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~rp~  285 (294)
T PHA02882        211 TRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI-----KNANKFIYDFIECVTKLSYEEKPD  285 (294)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc-----CCCCHHHHHHHHHHHhCCCCCCCC
Confidence            6789999999999999999999987632 22        222233222222     257899999999999999999999


Q ss_pred             cccccc
Q psy14043         87 AGQLLQ   92 (205)
Q Consensus        87 ~~~~l~   92 (205)
                      ..++.+
T Consensus       286 ~~~l~~  291 (294)
T PHA02882        286 YDALIK  291 (294)
T ss_pred             HHHHHH
Confidence            988764

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.56  E-value=7.7e-15  Score=116.20  Aligned_cols=89  Identities=25%  Similarity=0.403  Sum_probs=68.8

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++++||+|||++                               ++.++||||+||++|+|++ |+.||...........
T Consensus       247 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~  326 (374)
T cd05106         247 DGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK  326 (374)
T ss_pred             CCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH
Confidence            3578999999986                               2668999999999999997 9999987655444444


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.......+  .....++++++++.+||+.+|.+||++.++.+
T Consensus       327 ~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         327 MVKRGYQMS--RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HHHcccCcc--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            443332222  12347899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.56  E-value=1.2e-14  Score=110.56  Aligned_cols=88  Identities=17%  Similarity=0.290  Sum_probs=71.0

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++||||+||++|||++ |.+||...........
T Consensus       144 ~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  223 (279)
T cd05109         144 SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL  223 (279)
T ss_pred             CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            3578999999976                               2667899999999999998 9999987777666666


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +........   ....++++.+++.+||..+|++||++.+++.
T Consensus       224 ~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         224 LEKGERLPQ---PPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHCCCcCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            655432211   2357899999999999999999999999884

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.56  E-value=1.6e-14  Score=108.30  Aligned_cols=88  Identities=19%  Similarity=0.292  Sum_probs=71.8

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++                                ++.++|+||+||++|+|++ |+.||...+..+....
T Consensus       133 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  212 (257)
T cd05040         133 DDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK  212 (257)
T ss_pred             CCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            578999999976                                2567999999999999998 9999988888777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.......+  .....+..+.+++.+||..+|++||++.++++
T Consensus       213 ~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         213 IDKEGERLE--RPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHhcCCcCC--CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            665333222  22357899999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.56  E-value=9.1e-15  Score=114.24  Aligned_cols=88  Identities=23%  Similarity=0.415  Sum_probs=67.7

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHH-HHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEET-RAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~-~~~   49 (205)
                      ++.+||+|||++.                               +.++||||+||++|||++ |..||.+....+. ...
T Consensus       209 ~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~  288 (337)
T cd05054         209 NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRR  288 (337)
T ss_pred             CCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHH
Confidence            5789999999772                               557899999999999997 9999987544333 333


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +........   ....++++.+++.+||+.+|++||++.+++++
T Consensus       289 ~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         289 LKEGTRMRA---PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HhccCCCCC---CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            333322111   23578999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.56  E-value=1.5e-14  Score=110.39  Aligned_cols=88  Identities=20%  Similarity=0.364  Sum_probs=72.1

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++|+||+||++|+|++ |..||.+.+..+....
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~  244 (288)
T cd05050         165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYY  244 (288)
T ss_pred             CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3578999999976                               1567999999999999997 8899988888887777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+.....   ....+.++.+|+.+||+.+|++||++.++++
T Consensus       245 ~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         245 VRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            776544221   2357899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.56  E-value=1.6e-14  Score=108.68  Aligned_cols=88  Identities=23%  Similarity=0.342  Sum_probs=71.4

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+.                              +.++|+||+||++|+|++ |..||.+....+....+
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~  216 (260)
T cd05069         137 DNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV  216 (260)
T ss_pred             CCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            35789999999872                              457999999999999999 99999988777777776


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..... .  ......+..+++++.+||..+|++||++.++.+
T Consensus       217 ~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         217 ERGYR-M--PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HcCCC-C--CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            65422 1  122368899999999999999999999887754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.56  E-value=1.1e-14  Score=113.35  Aligned_cols=86  Identities=23%  Similarity=0.335  Sum_probs=64.3

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC-------------------------------------
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-------------------------------------   58 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-------------------------------------   58 (205)
                      +.++||||+||++|+|++|++||.+....+....+.......+                                     
T Consensus       188 ~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (328)
T cd08226         188 NVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTM  267 (328)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccc
Confidence            5678999999999999999999987665554443332221111                                     


Q ss_pred             ------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         59 ------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        59 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                            ......+++.+++|+.+||+.+|++||++.++++|+|+.....
T Consensus       268 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         268 TSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence                  0011235678999999999999999999999999999976543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.56  E-value=1.5e-14  Score=108.89  Aligned_cols=88  Identities=22%  Similarity=0.420  Sum_probs=71.8

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++.                              +.++|+||+||++|+|++ |..||.+....+....+
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~  217 (261)
T cd05072         138 ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL  217 (261)
T ss_pred             CCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence            35789999999882                              557999999999999998 99999888777777776


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..... .+  ....++.++.+++.+||..+|++||++.++.+
T Consensus       218 ~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         218 QRGYR-MP--RMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HcCCC-CC--CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            65432 22  22358899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.55  E-value=6.4e-15  Score=113.76  Aligned_cols=94  Identities=24%  Similarity=0.369  Sum_probs=67.8

Q ss_pred             CCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHH----
Q psy14043          3 GAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEE----   45 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~----   45 (205)
                      ++.+||+|||++                                 ++.++|+||+||++|+|++|.+||.+.....    
T Consensus       148 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~  227 (316)
T cd07842         148 RGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSN  227 (316)
T ss_pred             cceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccc
Confidence            689999999975                                 2457999999999999999999997653321    


Q ss_pred             -----HHHHHHh--------------------------CCCCCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCc
Q psy14043         46 -----TRAHISV--------------------------ADYSFPP-------EQCGHISVPARELIGQLLNTHADKRPTA   87 (205)
Q Consensus        46 -----~~~~i~~--------------------------~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~   87 (205)
                           .+..+..                          ....++.       ......+.++.+++.+||+.+|++||++
T Consensus       228 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~  307 (316)
T cd07842         228 PFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITA  307 (316)
T ss_pred             hhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCH
Confidence                 1111100                          0000110       0001467789999999999999999999


Q ss_pred             ccccccchh
Q psy14043         88 GQLLQVAWF   96 (205)
Q Consensus        88 ~~~l~~~~~   96 (205)
                      .++++||||
T Consensus       308 ~eil~~~~f  316 (316)
T cd07842         308 EEALEHPYF  316 (316)
T ss_pred             HHHhcCCCC
Confidence            999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.55  E-value=2e-14  Score=109.34  Aligned_cols=88  Identities=18%  Similarity=0.368  Sum_probs=71.0

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++||||+||++||+++ |..||.+.........
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~  223 (279)
T cd05111         144 SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL  223 (279)
T ss_pred             CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            3578999999977                               2567899999999999998 9999988777766666


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+.....+   ...+.+..+++.+|+..+|++||++.++++
T Consensus       224 ~~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         224 LEKGERLAQP---QICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHCCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            6554432222   246789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.55  E-value=9.1e-15  Score=110.12  Aligned_cols=87  Identities=30%  Similarity=0.408  Sum_probs=71.2

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++||||||+++||+++ |+.||...+..+....+
T Consensus       139 ~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~  218 (259)
T PF07714_consen  139 NGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL  218 (259)
T ss_dssp             TTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999988                               2889999999999999999 78999988888888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ........   ...++..+.++|.+||..+|++||++.++++
T Consensus       219 ~~~~~~~~---~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  219 KQGQRLPI---PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HTTEETTS---BTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ccccccee---ccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            65543221   2368999999999999999999999998764

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.55  E-value=1.7e-14  Score=109.71  Aligned_cols=94  Identities=31%  Similarity=0.428  Sum_probs=71.5

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||.+.                             +.++|+||+|+++|+|++|++||...+..+....+...
T Consensus       135 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~  214 (283)
T cd07830         135 PEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSV  214 (283)
T ss_pred             CCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHh
Confidence            5789999999772                             56799999999999999999999877665554443321


Q ss_pred             CC-------------------CCCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DY-------------------SFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~-------------------~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..                   ..+.       ......+.++++||.+||+.+|++||++.+++.|||+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         215 LGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            00                   0000       0011236889999999999999999999999999996

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.55  E-value=1.9e-14  Score=108.29  Aligned_cols=87  Identities=25%  Similarity=0.403  Sum_probs=70.9

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+.                              +.++|+|||||++|+|++ |.+||.+.+..+....+
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~  216 (260)
T cd05070         137 DGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV  216 (260)
T ss_pred             CCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            35789999999862                              458999999999999999 99999888887777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      ..... .  +.....+..+++|+.+||..+|++||++.++.
T Consensus       217 ~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         217 ERGYR-M--PCPQDCPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             HcCCC-C--CCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            65422 1  12236789999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.55  E-value=1.9e-14  Score=108.08  Aligned_cols=89  Identities=22%  Similarity=0.360  Sum_probs=71.9

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++|+||+||++|+|++ |+.||...+..+....+
T Consensus       135 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  214 (256)
T cd05059         135 EDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV  214 (256)
T ss_pred             CCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence            4678999999966                              2557999999999999999 89999887777777776


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......   ......+.++.+++.+||..+|++||++.++++.
T Consensus       215 ~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         215 SAGYRL---YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HcCCcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            654221   1123579999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.55  E-value=2.3e-14  Score=107.80  Aligned_cols=88  Identities=22%  Similarity=0.423  Sum_probs=71.9

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||.+.                             +.++|+||+||++|+|++ |+.||.+.+..+.+..+.
T Consensus       139 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~  218 (261)
T cd05148         139 EDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT  218 (261)
T ss_pred             CCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence            46789999999871                             567999999999999998 899998888777777776


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .... .+  .....++.+.+++.+||+.+|++||++.++.+
T Consensus       219 ~~~~-~~--~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         219 AGYR-MP--CPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             hCCc-CC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            5422 11  22367899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.55  E-value=1.9e-14  Score=107.86  Aligned_cols=88  Identities=26%  Similarity=0.394  Sum_probs=73.2

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||.+.                               +.++|+||+||++|+|++ |..||...+..+....+
T Consensus       141 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  220 (262)
T cd00192         141 DLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL  220 (262)
T ss_pred             CCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            4789999999882                               567999999999999999 69999988888888877


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......   .....+++++.+++.+||..+|++||++.+++.+
T Consensus       221 ~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         221 RKGYRL---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HcCCCC---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            764322   1223579999999999999999999999998764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.55  E-value=1.9e-14  Score=108.28  Aligned_cols=88  Identities=20%  Similarity=0.348  Sum_probs=71.5

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++.                              +.++|+||+||++|+|++ |+.||.+.+..+....+
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~  217 (261)
T cd05068         138 ENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV  217 (261)
T ss_pred             CCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            35789999999761                              558999999999999999 99999988887777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..... .+  .....+..+.+++.+||+.+|++||++.++.+
T Consensus       218 ~~~~~-~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         218 DQGYR-MP--CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HcCCC-CC--CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            65422 12  12357899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.55  E-value=1.7e-14  Score=109.39  Aligned_cols=88  Identities=20%  Similarity=0.277  Sum_probs=71.8

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++|+||+||++||+++ |.+||.+.+..+....
T Consensus       154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  233 (277)
T cd05032         154 EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKF  233 (277)
T ss_pred             CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHH
Confidence            3578999999975                               2677999999999999998 9999988888777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.......   .+...+.++.+++.+||+.+|++||++.++++
T Consensus       234 ~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         234 VIDGGHLD---LPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            66443211   12357899999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.54  E-value=1.9e-14  Score=107.84  Aligned_cols=87  Identities=26%  Similarity=0.394  Sum_probs=71.5

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||.+                          ++.++|+||+||++|+|++ |.+||...+..+....+.++..
T Consensus       136 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  215 (254)
T cd05083         136 DGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR  215 (254)
T ss_pred             CCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC
Confidence            578999999976                          2567999999999999997 9999988888777777665432


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+   ...+++.+.+++.+||..+|++||++.++++
T Consensus       216 ~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         216 MEP---PEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             CCC---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            211   2368899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.54  E-value=2e-14  Score=111.31  Aligned_cols=89  Identities=20%  Similarity=0.369  Sum_probs=71.2

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                               +.++||||+||++|||++ |..||.+....+....
T Consensus       144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~  223 (316)
T cd05108         144 TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI  223 (316)
T ss_pred             CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            35789999999882                               667899999999999997 9999988777665554


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.... ..+.  ....+.++.+++.+||..+|++||++.+++.+
T Consensus       224 ~~~~~-~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         224 LEKGE-RLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HhCCC-CCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            44332 2221  23578899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.54  E-value=1.2e-14  Score=111.82  Aligned_cols=89  Identities=26%  Similarity=0.369  Sum_probs=72.1

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                            ++.++||||+||++|||++ |.+||.+.+..+....+..
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  238 (303)
T cd05088         159 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  238 (303)
T ss_pred             CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence            3578999999977                            1678999999999999998 9999988777776666544


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..   ....+...++++.+++.+||+.+|++||++.++++.
T Consensus       239 ~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         239 GY---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CC---cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            32   111223578999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.54  E-value=2.2e-14  Score=107.56  Aligned_cols=89  Identities=27%  Similarity=0.493  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++|+||+||++|||++ |..||......+....+
T Consensus       135 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~  214 (256)
T cd05112         135 ENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI  214 (256)
T ss_pred             CCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence            3578999999975                              1557999999999999998 99999888877777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+.....+   ...+.++.+|+.+||..+|++||++.++++.
T Consensus       215 ~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         215 NAGFRLYKP---RLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             hCCCCCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            654332222   2468999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.54  E-value=2.2e-14  Score=107.88  Aligned_cols=89  Identities=22%  Similarity=0.385  Sum_probs=70.4

Q ss_pred             CCCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                 +.++||||+||++|||++ |.+||...+..+..
T Consensus       133 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~  212 (262)
T cd05058         133 ESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDIT  212 (262)
T ss_pred             CCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            35789999999762                                 557999999999999999 67788877777766


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+........   ....++.+.+++.+||..+|++||++.+++..
T Consensus       213 ~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         213 VYLLQGRRLLQ---PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHhcCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            66655433221   22578899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.54  E-value=2.6e-14  Score=109.26  Aligned_cols=88  Identities=25%  Similarity=0.412  Sum_probs=71.5

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                               +.++||||+||++|+|++ |..||.+....++...
T Consensus       162 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~  241 (290)
T cd05045         162 EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNL  241 (290)
T ss_pred             CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            36789999999872                               567899999999999998 9999988887776666


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.... ..+  ....++.++++|+.+||+.+|++||++.+++.
T Consensus       242 ~~~~~-~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         242 LKTGY-RME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HhCCC-CCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            55432 222  22468899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.54  E-value=2.6e-14  Score=107.70  Aligned_cols=88  Identities=24%  Similarity=0.347  Sum_probs=70.9

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+.                              +.++|+||+||++|+|++ |.+||.+....+....+
T Consensus       137 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~  216 (262)
T cd05071         137 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV  216 (262)
T ss_pred             CCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Confidence            35789999999761                              558999999999999999 89999888777777766


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ...... +  ....++..+.+++.+|++.+|++||++.++.+
T Consensus       217 ~~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         217 ERGYRM-P--CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             hcCCCC-C--CccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            554221 1  12357899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.54  E-value=2.7e-14  Score=107.34  Aligned_cols=88  Identities=19%  Similarity=0.272  Sum_probs=71.7

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++.                                +.++|+|||||++|++++ |..||.+....+...
T Consensus       130 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  209 (257)
T cd05115         130 NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS  209 (257)
T ss_pred             CCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence            35779999999761                                457999999999999996 999999888877777


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+.++....   .....+++++++|.+||..+|++||++.++.+
T Consensus       210 ~~~~~~~~~---~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         210 FIEQGKRLD---CPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             HHHCCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            776654322   12357899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.54  E-value=1.5e-14  Score=110.63  Aligned_cols=89  Identities=26%  Similarity=0.382  Sum_probs=72.7

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||.+                               ++.++||||+||++||+++ |..||.+....+....
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  246 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  246 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            3678999999976                               2667899999999999997 9999998888777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +......   ......+.++.+|+.+||..+|++||++.++++.
T Consensus       247 ~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         247 LKEGYRM---EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            6654321   1123578999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=3.4e-14  Score=107.17  Aligned_cols=92  Identities=24%  Similarity=0.397  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                                +.++|+||+||++|+|++|++||......+....
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  220 (264)
T cd06653         141 SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK  220 (264)
T ss_pred             CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence            35779999999762                                5678999999999999999999987665555444


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +.....  ++..+..+++++.+++.+||. +|..||++.+++.|||+
T Consensus       221 ~~~~~~--~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         221 IATQPT--KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHcCCC--CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            443221  222334689999999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.54  E-value=2.4e-14  Score=107.13  Aligned_cols=87  Identities=26%  Similarity=0.409  Sum_probs=69.7

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|+|++ |.+||...+.......+
T Consensus       130 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~  209 (252)
T cd05084         130 KNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI  209 (252)
T ss_pred             CCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH
Confidence            5779999999752                               446899999999999997 99999877777666666


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ......   ......+..+.+++.+||+.+|++||++.++++
T Consensus       210 ~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         210 EQGVRL---PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HcCCCC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            553221   122357899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.54  E-value=3.1e-14  Score=107.49  Aligned_cols=88  Identities=23%  Similarity=0.393  Sum_probs=71.3

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++.                                +.++|+||+||++|||++ |..||...+..+...
T Consensus       142 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~  221 (268)
T cd05063         142 SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK  221 (268)
T ss_pred             CCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence            35679999999771                                567899999999999997 999998877777777


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+.... ..+.  ....+.++++++.+||+.+|++||+..++++
T Consensus       222 ~i~~~~-~~~~--~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         222 AINDGF-RLPA--PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHhcCC-CCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            776542 2221  2357899999999999999999999988865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0695|consensus

Probab=99.53  E-value=1.7e-14  Score=108.57  Aligned_cols=97  Identities=30%  Similarity=0.462  Sum_probs=81.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCC-------CCCHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFL-------DESEEE   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~-------~~~~~~   45 (205)
                      ..|++||+|||+.                             |++.+|+|+|||++|||+.|+.||.       ..+.++
T Consensus       386 aeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nted  465 (593)
T KOG0695|consen  386 AEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTED  465 (593)
T ss_pred             cCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhH
Confidence            3699999999998                             5999999999999999999999995       123333


Q ss_pred             -HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC------cccccccchhhhcccC
Q psy14043         46 -TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT------AGQLLQVAWFAEIAIP  102 (205)
Q Consensus        46 -~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~------~~~~l~~~~~~~~~~~  102 (205)
                       +++.|.....++|.    .++-.+..+++..|.+||.+|..      +.++..|+||+.+.+.
T Consensus       466 ylfqvilekqiripr----slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  466 YLFQVILEKQIRIPR----SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             HHHHHHhhhcccccc----eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence             56677777778887    58999999999999999999963      5789999999876553

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.53  E-value=2.7e-14  Score=108.04  Aligned_cols=88  Identities=26%  Similarity=0.374  Sum_probs=71.1

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                            ++.++|+|||||++|||++ |..||.+.+..+....+..
T Consensus       147 ~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~  226 (270)
T cd05047         147 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  226 (270)
T ss_pred             CCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC
Confidence            3578999999987                            1568999999999999997 9999988877777766654


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ....   .....++.++.+++.+|+..+|.+||++.++++
T Consensus       227 ~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         227 GYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CCCC---CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            3221   122357899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG4236|consensus

Probab=99.53  E-value=4.8e-16  Score=122.82  Aligned_cols=99  Identities=33%  Similarity=0.588  Sum_probs=88.9

Q ss_pred             CeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          4 AVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         4 ~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      -++||||||.|                            |+..-|+||+||++|.-|.|..||..  .+++-..|++..+
T Consensus       704 PQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaF  781 (888)
T KOG4236|consen  704 PQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAF  781 (888)
T ss_pred             CceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhcccc
Confidence            47999999999                            58889999999999999999999953  4457788888999


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCC
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNN  104 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  104 (205)
                      .+|+..|.++++++.|||..+|+..-.+|++....+.|+|+++......
T Consensus       782 MyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~D  830 (888)
T KOG4236|consen  782 MYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLD  830 (888)
T ss_pred             ccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHH
Confidence            9999999999999999999999999999999999999999987765443

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.53  E-value=2.7e-14  Score=113.12  Aligned_cols=88  Identities=24%  Similarity=0.377  Sum_probs=67.7

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEE-TRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~-~~~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|||++ |..||....... ....
T Consensus       250 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~  329 (375)
T cd05104         250 GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM  329 (375)
T ss_pred             CCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH
Confidence            567999999986                               2678999999999999998 999998765443 3333


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +..+.. ..  .+...+.++++|+.+||..+|++||++.++++.
T Consensus       330 ~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         330 IKEGYR-ML--SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHhCcc-CC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            333321 11  123468899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.53  E-value=3.4e-14  Score=109.90  Aligned_cols=88  Identities=23%  Similarity=0.402  Sum_probs=72.4

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|+|++ |..||.+.+..+....+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~  249 (314)
T cd05099         170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLL  249 (314)
T ss_pred             CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            6789999999872                               557999999999999999 99999988887777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......   .....++.++++++.+||..+|++||++.++++.
T Consensus       250 ~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         250 REGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             HcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            654321   1123678899999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.53  E-value=2.2e-14  Score=108.20  Aligned_cols=89  Identities=34%  Similarity=0.528  Sum_probs=67.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE--EETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~--~~~~~~i   50 (205)
                      .++.+||+|||++                             ++.++|+||+|+++|+|++|..||.+...  .+....+
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  220 (267)
T cd08229         141 ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI  220 (267)
T ss_pred             CCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhh
Confidence            3578999999975                             15578999999999999999999975433  3344444


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .....  ++......++++++++.+||..+|++||++.++++
T Consensus       221 ~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         221 EQCDY--PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             hcCCC--CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            43322  22223358899999999999999999999987664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.53  E-value=3.9e-14  Score=106.53  Aligned_cols=88  Identities=23%  Similarity=0.374  Sum_probs=71.5

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||.+.                              +.++|+||+||++|++++ |+.||.+.+.......+
T Consensus       138 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  217 (261)
T cd05034         138 ENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV  217 (261)
T ss_pred             CCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            46789999999752                              668999999999999998 99999988887777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ...... +  .....+.++++++.+||..+|++||++.++.+
T Consensus       218 ~~~~~~-~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         218 ERGYRM-P--RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HcCCCC-C--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            654321 1  12246899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.53  E-value=4.2e-14  Score=105.66  Aligned_cols=88  Identities=23%  Similarity=0.424  Sum_probs=71.0

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      .++.+||+|||++                              ++.++|+||+||++|++++ |..||.+.........+
T Consensus       128 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~  207 (250)
T cd05085         128 ENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV  207 (250)
T ss_pred             CCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            3577999999976                              1557999999999999998 99999888777766666


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ......   .....++.++.+++.+|+..+|++||++.++.+
T Consensus       208 ~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         208 EKGYRM---SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            554321   122357899999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.53  E-value=3.7e-14  Score=106.01  Aligned_cols=87  Identities=28%  Similarity=0.457  Sum_probs=70.2

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|+|++ |..||.+.........+
T Consensus       129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~  208 (251)
T cd05041         129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI  208 (251)
T ss_pred             CCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH
Confidence            5789999999762                               567899999999999998 89999887776666666


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .... ..+  .....+.++.+++.+||..+|.+||++.++++
T Consensus       209 ~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         209 ESGY-RMP--APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             hcCC-CCC--CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            5432 111  12357899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.53  E-value=2.1e-14  Score=121.33  Aligned_cols=84  Identities=33%  Similarity=0.577  Sum_probs=73.8

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      |+.++||||+||++|||++|++||.+....+.+..+....+.++... ..++..+.+++.+||..+|.+|+++.++++|+
T Consensus       557 ~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~-~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~  635 (669)
T cd05610         557 HGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGE-EKLSVNAQNAIEILLTMDPTKRAGLKELKQHP  635 (669)
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCccc-ccCCHHHHHHHHHHcccChhHCcCHHHHHhCH
Confidence            47899999999999999999999999988888888877666555433 35789999999999999999999999999999


Q ss_pred             hhhhc
Q psy14043         95 WFAEI   99 (205)
Q Consensus        95 ~~~~~   99 (205)
                      |+...
T Consensus       636 ~~~~~  640 (669)
T cd05610         636 LFHGV  640 (669)
T ss_pred             hhcCC
Confidence            99765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.53  E-value=3.8e-14  Score=107.05  Aligned_cols=88  Identities=18%  Similarity=0.320  Sum_probs=72.1

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      .++.+|++|||.+                              ++.++||||+||++||+++ |..||.+.+..+....+
T Consensus       142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~  221 (266)
T cd05064         142 SDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV  221 (266)
T ss_pred             CCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence            3578999999965                              2568999999999999775 99999988888877777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+... +  .+..++..+.+++.+||+.+|++||++.++.+
T Consensus       222 ~~~~~~-~--~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         222 EDGFRL-P--APRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HCCCCC-C--CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            665332 1  23468999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.53  E-value=3.4e-14  Score=108.00  Aligned_cols=88  Identities=24%  Similarity=0.364  Sum_probs=71.1

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                               +.++||||+||++||+++ |++||...+..+....
T Consensus       152 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  231 (280)
T cd05043         152 EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAY  231 (280)
T ss_pred             CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHH
Confidence            35789999999872                               568999999999999998 9999988777776666


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.... ..+  ....+++++++++.+||..+|++||++.++++
T Consensus       232 ~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         232 LKDGY-RLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHcCC-CCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            55432 222  22357899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG4645|consensus

Probab=99.53  E-value=1.7e-15  Score=129.70  Aligned_cols=92  Identities=27%  Similarity=0.448  Sum_probs=78.2

Q ss_pred             CCeEEEEecCCCC------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC-CHHH
Q psy14043          3 GAVLKLIDLGSSA------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE-SEEE   45 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~-~~~~   45 (205)
                      +|.||+.|||.|.                                    .-+.||||||||+.||+||+.||... +..+
T Consensus      1370 ~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a 1449 (1509)
T KOG4645|consen 1370 NGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA 1449 (1509)
T ss_pred             CCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH
Confidence            6899999999992                                    66899999999999999999999764 5667


Q ss_pred             HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         46 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        46 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      +++.+..+..+.-+   .++++++++||.+||..||.+|.++.|+++|.|-.
T Consensus      1450 IMy~V~~gh~Pq~P---~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1450 IMYHVAAGHKPQIP---ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             HHhHHhccCCCCCc---hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence            88888776543222   36999999999999999999999999999998854

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.53  E-value=3.5e-14  Score=109.44  Aligned_cols=88  Identities=24%  Similarity=0.394  Sum_probs=72.1

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||.+.                               +.++|+||+||++|+|++ |.+||.+.+..+....+
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~  255 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL  255 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence            5789999999772                               567999999999999998 99999887777777766


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......   ..+...+.++++++.+||..+|++||++.++++.
T Consensus       256 ~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         256 KEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HcCCCC---CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            654321   1223578999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.52  E-value=3.9e-14  Score=106.54  Aligned_cols=87  Identities=21%  Similarity=0.314  Sum_probs=70.7

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.++|+|||++.                              +.++|+||+||++||+++ |++||.+.+..+....+.
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  217 (260)
T cd05067         138 TLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE  217 (260)
T ss_pred             CCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH
Confidence            5679999999771                              567999999999999998 999999887777777665


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .....   ......+.++++++.+||..+|++||++.++..
T Consensus       218 ~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         218 RGYRM---PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             cCCCC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            54321   222357899999999999999999999888754

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.52  E-value=4e-14  Score=108.96  Aligned_cols=88  Identities=25%  Similarity=0.471  Sum_probs=68.2

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+|++|||++.                               +.++||||+||++|+|++ |.+||.+....+.....
T Consensus       177 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~  256 (302)
T cd05055         177 GKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL  256 (302)
T ss_pred             CCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH
Confidence            5678999999872                               456899999999999998 99999876655544444


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .......+  .....++++++++.+||..+|++||++.++++
T Consensus       257 ~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         257 IKEGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHcCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            33322221  22357899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0665|consensus

Probab=99.52  E-value=1.1e-14  Score=108.48  Aligned_cols=95  Identities=23%  Similarity=0.371  Sum_probs=74.6

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||.|||+|                            |...+||||+||++.||++|+..|.|.+..++..++....
T Consensus       154 ~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~l  233 (369)
T KOG0665|consen  154 DCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQL  233 (369)
T ss_pred             hhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHh
Confidence            567999999999                            4788999999999999999999999887766666553311


Q ss_pred             C---------------------------C----CCCCc-------CCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         55 Y---------------------------S----FPPEQ-------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        55 ~---------------------------~----~~~~~-------~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .                           .    +|-..       .+.-...+++++.+||..+|++|+++.++++|||+
T Consensus       234 gtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~  313 (369)
T KOG0665|consen  234 GTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI  313 (369)
T ss_pred             cCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence            0                           0    11000       01235688999999999999999999999999999


Q ss_pred             h
Q psy14043         97 A   97 (205)
Q Consensus        97 ~   97 (205)
                      +
T Consensus       314 ~  314 (369)
T KOG0665|consen  314 K  314 (369)
T ss_pred             e
Confidence            7

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.52  E-value=3.6e-14  Score=107.38  Aligned_cols=88  Identities=18%  Similarity=0.292  Sum_probs=71.2

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||.+.                               +.++||||+||++|+|++ |++||.+.+..+....+
T Consensus       149 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~  228 (273)
T cd05074         149 NMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYL  228 (273)
T ss_pred             CCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHH
Confidence            5789999999862                               557999999999999999 99999888777777766


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........   ....++.+.+++.+||..+|++||++.++++.
T Consensus       229 ~~~~~~~~---~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         229 IKGNRLKQ---PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            65432211   12578999999999999999999999888653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.52  E-value=4.9e-14  Score=106.46  Aligned_cols=90  Identities=23%  Similarity=0.381  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||.+.                            +.++|+||+|+++|+|++|++||...........+...
T Consensus       149 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~  228 (269)
T cd08528         149 EDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEA  228 (269)
T ss_pred             CCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhc
Confidence            35779999999872                            56899999999999999999999877776666666654


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .....  .....++.+.++|.+||+.+|++||++.++..+
T Consensus       229 ~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         229 VYEPL--PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             cCCcC--CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            44322  122578999999999999999999999887543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.52  E-value=5.3e-14  Score=104.07  Aligned_cols=93  Identities=40%  Similarity=0.609  Sum_probs=74.6

Q ss_pred             CCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~i~~~   53 (205)
                      ++.++++|||.+.                            +.++|+|++|+++|++++|..||.. .........+...
T Consensus       123 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~  202 (244)
T smart00220      123 DGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKP  202 (244)
T ss_pred             CCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence            5789999999872                            5689999999999999999999987 5555555555544


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ...... ....++.++.+++.+||..+|++||++.++++|+|+
T Consensus       203 ~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      203 KPPFPP-PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CCCCcc-ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            443322 111278999999999999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.52  E-value=8.3e-15  Score=121.23  Aligned_cols=81  Identities=16%  Similarity=0.181  Sum_probs=52.5

Q ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC-----------CCC------CcCCCCCHHHHHHHHHhcccCc
Q psy14043         19 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS-----------FPP------EQCGHISVPARELIGQLLNTHA   81 (205)
Q Consensus        19 ~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------~~~------~~~~~~~~~~~~li~~~l~~~p   81 (205)
                      +||||+||++|||+++..++... .......+......           ...      .........+++||.+||++||
T Consensus       360 ~DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP  438 (566)
T PLN03225        360 FDIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG  438 (566)
T ss_pred             cccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence            49999999999999976664321 11122222211110           000      0011123456799999999999


Q ss_pred             CCCCCcccccccchhhhcc
Q psy14043         82 DKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        82 ~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+||++.++++||||....
T Consensus       439 ~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        439 RQRISAKAALAHPYFDREG  457 (566)
T ss_pred             ccCCCHHHHhCCcCcCCCC
Confidence            9999999999999997643

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.52  E-value=3.9e-14  Score=106.87  Aligned_cols=88  Identities=24%  Similarity=0.437  Sum_probs=71.9

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|+|++ |..||......+....+
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~  221 (266)
T cd05033         142 NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV  221 (266)
T ss_pred             CCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence            5779999999762                               567999999999999998 99999888777777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ...... +.  ....++.+.+++.+||+.+|++||++.+++++
T Consensus       222 ~~~~~~-~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         222 EDGYRL-PP--PMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HcCCCC-CC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            654322 21  23578999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.52  E-value=6.1e-14  Score=105.06  Aligned_cols=88  Identities=27%  Similarity=0.399  Sum_probs=73.4

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++|+||+||++|+|++ |.+||...+..+....+
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~  217 (258)
T smart00219      138 ENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYL  217 (258)
T ss_pred             cCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            3568999999988                              2667999999999999998 89999888888888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ........   ....+.++.+++.+||..+|++||++.++++
T Consensus       218 ~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      218 KKGYRLPK---PENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             hcCCCCCC---CCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            76554322   2358999999999999999999999998865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.52  E-value=5e-14  Score=108.44  Aligned_cols=89  Identities=22%  Similarity=0.342  Sum_probs=73.6

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||.+                               ++.++||||+||++|+|++ |..||.+.+..+....
T Consensus       172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  251 (304)
T cd05101         172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  251 (304)
T ss_pred             CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            3578999999976                               2668999999999999998 8999998888888777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +........   ...++.++++|+.+||..+|++||++.++++.
T Consensus       252 ~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         252 LKEGHRMDK---PANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHcCCcCCC---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            765433211   23678999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.52  E-value=4.5e-14  Score=106.64  Aligned_cols=74  Identities=20%  Similarity=0.429  Sum_probs=59.8

Q ss_pred             CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.++|||||||++|+|++ |..||...+..+....+......   .....++..+.++|.+||..+|++||++.++++
T Consensus       191 ~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         191 TTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRL---QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             ccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCcc---CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            567899999999999998 99999887777776666543221   112357899999999999999999999988764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0668|consensus

Probab=99.52  E-value=3.4e-14  Score=101.70  Aligned_cols=97  Identities=28%  Similarity=0.442  Sum_probs=76.1

Q ss_pred             CeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHHhC
Q psy14043          4 AVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFL-DESEEETRAHISVA   53 (205)
Q Consensus         4 ~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~-~~~~~~~~~~i~~~   53 (205)
                      -.++|+|+|+|                             |+.+-|+||+||++..|+..+-||. |.++.+++.+|.+.
T Consensus       170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV  249 (338)
T KOG0668|consen  170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV  249 (338)
T ss_pred             ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence            46899999999                             5999999999999999999888875 66777776666431


Q ss_pred             -------------CCCCCC-----------C---------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 -------------DYSFPP-----------E---------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 -------------~~~~~~-----------~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                                   ...+++           .         ...-.++++.||+.++|..|-++|+++.+++.||||..+.
T Consensus       250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             hChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence                         111111           0         1112579999999999999999999999999999997654

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.51  E-value=2.9e-14  Score=105.99  Aligned_cols=87  Identities=24%  Similarity=0.373  Sum_probs=66.3

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .++.+|++|||.+                          ++.++|+||+||++|||++|..||.......  .  .....
T Consensus       120 ~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--~--~~~~~  195 (237)
T cd05576         120 DRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--N--THTTL  195 (237)
T ss_pred             CCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--c--ccccc
Confidence            3577999999964                          2567999999999999999999885432210  0  01111


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWF   96 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~   96 (205)
                      ..|    ..+++.++++|.+||+.+|++|+++     .+++.|||+
T Consensus       196 ~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         196 NIP----EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             CCc----ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            222    3578999999999999999999986     889999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.51  E-value=6.4e-14  Score=105.09  Aligned_cols=88  Identities=24%  Similarity=0.373  Sum_probs=71.4

Q ss_pred             CCCeEEEEecCCCC--------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||.+.                          +.++|+||+||++|+|++ |..||...+..+....+....
T Consensus       137 ~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~  216 (256)
T cd05039         137 EDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY  216 (256)
T ss_pred             CCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC
Confidence            36789999999762                          557999999999999997 999998887777776666542


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..   ......++++.++|.+||..+|++||++.+++.
T Consensus       217 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         217 RM---EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             CC---CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            21   222357899999999999999999999988765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0263|consensus

Probab=99.51  E-value=2.8e-14  Score=115.95  Aligned_cols=82  Identities=26%  Similarity=0.476  Sum_probs=76.1

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      ++...|..++.+++++|.|+++|+|+.|+.|++||+.++.              +...+.+|++.|.++.||.||..||+
T Consensus       571 RiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~--------------~v~~l~~Ht~ti~SlsFS~dg~vLas  636 (707)
T KOG0263|consen  571 RIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGS--------------LVKQLKGHTGTIYSLSFSRDGNVLAS  636 (707)
T ss_pred             EEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCc--------------chhhhhcccCceeEEEEecCCCEEEe
Confidence            4456788999999999999999999999999999999987              77889999999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      ||.|.+|++||+.+..
T Consensus       637 gg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  637 GGADNSVRLWDLTKVI  652 (707)
T ss_pred             cCCCCeEEEEEchhhc
Confidence            9999999999997754

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.51  E-value=4.8e-14  Score=106.34  Aligned_cols=89  Identities=36%  Similarity=0.545  Sum_probs=68.5

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES--EEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~--~~~~~~~i~   51 (205)
                      ++.++|+|||++                             ++.++|+||+||++|+|++|..||....  .......+.
T Consensus       142 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08228         142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE  221 (267)
T ss_pred             CCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh
Confidence            567999999976                             2667999999999999999999996543  334445544


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ....  ++......+..+++++.+||..+|++||++.++++.
T Consensus       222 ~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         222 QCDY--PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             cCCC--CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            3322  222223578899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0586|consensus

Probab=99.51  E-value=4.9e-15  Score=118.45  Aligned_cols=92  Identities=32%  Similarity=0.613  Sum_probs=85.1

Q ss_pred             CCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +.++||+|||++.                             ++.+|+||+|+++|.|+.|..||.+.+..++......+
T Consensus       191 ~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g  270 (596)
T KOG0586|consen  191 NMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG  270 (596)
T ss_pred             ccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee
Confidence            4569999999992                             88999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .+.+|.    -++.+++++|+++|..+|.+|++..+++.|.|+..
T Consensus       271 k~rIp~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  271 KYRIPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             eecccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence            998886    48999999999999999999999999999999843

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.50  E-value=6.4e-14  Score=105.94  Aligned_cols=88  Identities=23%  Similarity=0.322  Sum_probs=71.9

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++|+|||||++|||++ |..||.+.+..+....+.
T Consensus       143 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~  222 (270)
T cd05056         143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE  222 (270)
T ss_pred             CCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            578999999976                              2567899999999999986 999999888777777766


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ++....   .+...+..+.+++.+|+..+|++||++.+++..
T Consensus       223 ~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         223 NGERLP---MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             cCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            554322   223678999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG1151|consensus

Probab=99.50  E-value=6.1e-15  Score=114.56  Aligned_cols=81  Identities=26%  Similarity=0.485  Sum_probs=64.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHH---HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAH---ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~-~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      +.++||||+|||+|..+.|+.||... +..++++.   +...+..||+.  +.++.++++||.+||++.-+.|....++.
T Consensus       662 snKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  662 SNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             ccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            88999999999999999999999654 22233322   22234455543  35899999999999999999999999999


Q ss_pred             ccchhhh
Q psy14043         92 QVAWFAE   98 (205)
Q Consensus        92 ~~~~~~~   98 (205)
                      .+||+..
T Consensus       740 ~dpyllP  746 (775)
T KOG1151|consen  740 CDPYLLP  746 (775)
T ss_pred             cCccccc
Confidence            9999865

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.50  E-value=7e-14  Score=107.05  Aligned_cols=90  Identities=18%  Similarity=0.292  Sum_probs=69.1

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS--GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~--g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|||++  |..||...+..+.+..
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~  245 (296)
T cd05051         166 NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIEN  245 (296)
T ss_pred             CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHH
Confidence            468999999976                               2678999999999999988  7889987777666666


Q ss_pred             HHhC----CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVA----DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +...    ............+.++.+++.+||+.+|++||++.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         246 AGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            5432    111111122356799999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0266|consensus

Probab=99.50  E-value=6e-14  Score=113.61  Aligned_cols=93  Identities=23%  Similarity=0.339  Sum_probs=81.1

Q ss_pred             cccccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEE
Q psy14043         87 AGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI  166 (205)
Q Consensus        87 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~  166 (205)
                      ..++.+.-........|...+.++.|+|+++.+++|+.|+++++||+.++.              ..+.+.+|.+.|+++
T Consensus       229 iwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~--------------~~~~l~~hs~~is~~  294 (456)
T KOG0266|consen  229 IWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGE--------------CVRKLKGHSDGISGL  294 (456)
T ss_pred             EeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCe--------------EEEeeeccCCceEEE
Confidence            344433323334455888899999999999999999999999999999976              778999999999999


Q ss_pred             EEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        167 IWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       167 ~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      +|++++++|++++.|+.|+|||+.++.
T Consensus       295 ~f~~d~~~l~s~s~d~~i~vwd~~~~~  321 (456)
T KOG0266|consen  295 AFSPDGNLLVSASYDGTIRVWDLETGS  321 (456)
T ss_pred             EECCCCCEEEEcCCCccEEEEECCCCc
Confidence            999999999999999999999999987

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.50  E-value=7.6e-14  Score=108.86  Aligned_cols=89  Identities=24%  Similarity=0.386  Sum_probs=73.4

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++||||+||++|||++ |..||.+.+..+....+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  249 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL  249 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            6789999999762                               567999999999999998 89999988888877777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ......   ......+.++.+++.+||+.+|.+||++.+++++-
T Consensus       250 ~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l  290 (334)
T cd05100         250 KEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL  290 (334)
T ss_pred             HcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            654321   11235788999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.49  E-value=8.4e-14  Score=104.77  Aligned_cols=87  Identities=20%  Similarity=0.317  Sum_probs=70.3

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||.+.                              +.++|+||+||++|++++ |.+||.+.+..+....+.
T Consensus       138 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~  217 (260)
T cd05073         138 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE  217 (260)
T ss_pred             CCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence            5789999999762                              557999999999999998 999999887777777666


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .....   +.....+.++.+++.+||+.+|++||+..+++.
T Consensus       218 ~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         218 RGYRM---PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             CCCCC---CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            54321   122468899999999999999999999877653

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.49  E-value=9.8e-14  Score=106.80  Aligned_cols=89  Identities=19%  Similarity=0.276  Sum_probs=66.6

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS--GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~--g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|||++  +..||.+.+..+....
T Consensus       174 ~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~  253 (304)
T cd05096         174 NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIEN  253 (304)
T ss_pred             CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHH
Confidence            578999999976                               2667999999999999986  6788987766665554


Q ss_pred             HHhC----CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         50 ISVA----DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        50 i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      +...    ...........++..+.+|+.+||..+|++||++.++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            4321    11111111235789999999999999999999999884

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0266|consensus

Probab=99.49  E-value=9e-14  Score=112.60  Aligned_cols=80  Identities=20%  Similarity=0.377  Sum_probs=71.9

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..+...++.++|+|+++++++++.|+++++||+....             ...+++.||+..|++++|+|+|+.++||+.
T Consensus       200 ~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~-------------~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~  266 (456)
T KOG0266|consen  200 SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG-------------RNLKTLKGHSTYVTSVAFSPDGNLLVSGSD  266 (456)
T ss_pred             cccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-------------eEEEEecCCCCceEEEEecCCCCEEEEecC
Confidence            4577789999999999999999999999999994332             166899999999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|+|||+.+++
T Consensus       267 D~tvriWd~~~~~  279 (456)
T KOG0266|consen  267 DGTVRIWDVRTGE  279 (456)
T ss_pred             CCcEEEEeccCCe
Confidence            9999999999854

>KOG0584|consensus

Probab=99.49  E-value=3.2e-14  Score=114.12  Aligned_cols=94  Identities=20%  Similarity=0.290  Sum_probs=79.6

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-~~~~~~~~i~~~~   54 (205)
                      +-|.+||.|.|+|                          |+..+||||||+++.||+|+..||... +..+++.++..+.
T Consensus       181 ~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi  260 (632)
T KOG0584|consen  181 NLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI  260 (632)
T ss_pred             CcCceeecchhHHHHhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC
Confidence            3589999999999                          699999999999999999999999864 5667788888775


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .+-.  ...--.+++++||.+||.. .+.|+++.++|.|+||..
T Consensus       261 KP~s--l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  261 KPAA--LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             CHHH--hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence            4322  1123479999999999999 999999999999999965

>KOG1273|consensus

Probab=99.48  E-value=7.7e-14  Score=103.27  Aligned_cols=73  Identities=23%  Similarity=0.457  Sum_probs=69.7

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      ..|..|++-|.++|.|..+|.+-|||+.+..              ..+.+.+|..+|.++|||+||++|.|+|.|..|++
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--------------iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~l   91 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--------------IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKL   91 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccc--------------hhhhhhccccceeEEEecCCCCEeeeecCCceeEE
Confidence            6788999999999999999999999999987              67899999999999999999999999999999999


Q ss_pred             EeecCCC
Q psy14043        187 WMLYKEK  193 (205)
Q Consensus       187 wd~~~~~  193 (205)
                      ||+..|.
T Consensus        92 wDl~~gs   98 (405)
T KOG1273|consen   92 WDLLKGS   98 (405)
T ss_pred             EeccCCC
Confidence            9999886

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.48  E-value=1.4e-13  Score=105.98  Aligned_cols=89  Identities=20%  Similarity=0.339  Sum_probs=70.3

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++.                               +.++||||+||++|||++ |..||.+....+....
T Consensus       144 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~  223 (303)
T cd05110         144 SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL  223 (303)
T ss_pred             CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            35789999999882                               567999999999999997 9999988766665555


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +..... .+.  ....+..+++++.+|+..+|++||++.++++.
T Consensus       224 ~~~~~~-~~~--~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         224 LEKGER-LPQ--PPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHCCCC-CCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            544332 221  23478899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0199|consensus

Probab=99.48  E-value=1e-13  Score=112.90  Aligned_cols=91  Identities=16%  Similarity=0.322  Sum_probs=77.9

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .-.|||+|||+..                                +.++|+|++||+++||++ |.-||.|....+++++
T Consensus       248 prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~  327 (1039)
T KOG0199|consen  248 PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN  327 (1039)
T ss_pred             cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence            3579999999982                                999999999999999998 8999999999999999


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      |..++. ++.+  +.++.+.++++++||..+|.+||++.++.+.-+.
T Consensus       328 iD~~er-LpRP--k~csedIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  328 IDAGER-LPRP--KYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             cccccc-CCCC--CCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence            985543 3322  3589999999999999999999999988755444

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.48  E-value=1.4e-13  Score=109.92  Aligned_cols=87  Identities=25%  Similarity=0.487  Sum_probs=66.9

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH-HH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETR-AH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~-~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|||++ |..||......... ..
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~  352 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK  352 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence            567999999986                               2678999999999999997 99999876544333 33


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +... ...+  ....+++++++++.+||..+|++||++.++.+
T Consensus       353 ~~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         353 IKSG-YRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HhcC-CCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            3332 2222  22368899999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0645|consensus

Probab=99.48  E-value=1.7e-13  Score=99.36  Aligned_cols=79  Identities=18%  Similarity=0.428  Sum_probs=71.7

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...++.++|+|.|+++|++|.|.++-||.-..+.            +++..+++||...|.+++||++|.+||+||.
T Consensus        58 ~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e------------fecv~~lEGHEnEVK~Vaws~sG~~LATCSR  125 (312)
T KOG0645|consen   58 DGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGE------------FECVATLEGHENEVKCVAWSASGNYLATCSR  125 (312)
T ss_pred             ccchheeeeeeecCCCcEEEEeeccceEEEeecCCCc------------eeEEeeeeccccceeEEEEcCCCCEEEEeeC
Confidence            3577789999999999999999999999999987543            4578899999999999999999999999999


Q ss_pred             CCcEEEEeecC
Q psy14043        181 TGLIIVWMLYK  191 (205)
Q Consensus       181 d~~i~~wd~~~  191 (205)
                      |++|.||.+..
T Consensus       126 DKSVWiWe~de  136 (312)
T KOG0645|consen  126 DKSVWIWEIDE  136 (312)
T ss_pred             CCeEEEEEecC
Confidence            99999998874

>KOG0315|consensus

Probab=99.48  E-value=1.5e-13  Score=98.74  Aligned_cols=104  Identities=22%  Similarity=0.348  Sum_probs=82.0

Q ss_pred             hcccCcCCCCCcccccccchhhhccc----------CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhh
Q psy14043         76 LLNTHADKRPTAGQLLQVAWFAEIAI----------PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAA  145 (205)
Q Consensus        76 ~l~~~p~~R~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~  145 (205)
                      .|...|+++.-+...-+|--+.++..          .+...+..+.|+.+|+++.+||+||++||||++...        
T Consensus        45 rLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~--------  116 (311)
T KOG0315|consen   45 RLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS--------  116 (311)
T ss_pred             eEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcc--------
Confidence            45566666666655555554443322          344567889999999999999999999999999853        


Q ss_pred             hcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        146 ANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       146 ~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                             .++...|.++|++++.+|+...|.+|+++|.|+|||+....-
T Consensus       117 -------~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c  158 (311)
T KOG0315|consen  117 -------CQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSC  158 (311)
T ss_pred             -------cchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcc
Confidence                   345567889999999999999999999999999999988754

>KOG4278|consensus

Probab=99.48  E-value=1.2e-13  Score=111.51  Aligned_cols=88  Identities=23%  Similarity=0.405  Sum_probs=75.7

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++..+||+|||++.                              +.|+|||+|||+|+|+.| |-.||.|.+..+.+..+
T Consensus       400 EnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL  479 (1157)
T KOG4278|consen  400 ENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL  479 (1157)
T ss_pred             ccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH
Confidence            46789999999992                              889999999999999988 99999999999888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .++ +++..  +..+++.++.|+..||+.+|..||++.++-+
T Consensus       480 Ekg-yRM~~--PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  480 EKG-YRMDG--PEGCPPKVYELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             hcc-ccccC--CCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence            765 33333  2379999999999999999999999987654

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.47  E-value=1.3e-13  Score=103.92  Aligned_cols=89  Identities=35%  Similarity=0.542  Sum_probs=67.6

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE--SEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~--~~~~~~~~i   50 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|+.||...  +..+....+
T Consensus       141 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  220 (267)
T cd08224         141 ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI  220 (267)
T ss_pred             CCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhh
Confidence            3678999999976                             256789999999999999999999654  333444454


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+...  +......+..++++|.+||..+|++||++.++++
T Consensus       221 ~~~~~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         221 EKCDYP--PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             hcCCCC--CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            443321  1112257889999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.47  E-value=1.9e-13  Score=103.25  Aligned_cols=88  Identities=22%  Similarity=0.419  Sum_probs=71.2

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+|++|||++                                ++.++|+||+||++|++++ |..||.+....+...
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~  220 (267)
T cd05066         141 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK  220 (267)
T ss_pred             CCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH
Confidence            4678999999976                                1667999999999999886 999998877777777


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+.+.. ..+.  ....++.+.+++.+|++.+|.+||++.++++
T Consensus       221 ~~~~~~-~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         221 AIEEGY-RLPA--PMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHhCCC-cCCC--CCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            776542 2221  2357899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0279|consensus

Probab=99.47  E-value=1.4e-13  Score=100.24  Aligned_cols=79  Identities=16%  Similarity=0.287  Sum_probs=72.5

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+..+..++++++..+++.|+++++||+.++.              ..+.|.||+..|.++++|+|.+.++|||
T Consensus        59 ~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~--------------~t~~f~GH~~dVlsva~s~dn~qivSGS  124 (315)
T KOG0279|consen   59 LTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE--------------STRRFVGHTKDVLSVAFSTDNRQIVSGS  124 (315)
T ss_pred             eeccceEecceEEccCCceEEeccccceEEEEEecCCc--------------EEEEEEecCCceEEEEecCCCceeecCC
Confidence            34567788899999999999999999999999999986              5688999999999999999999999999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      .|++|++||+..+
T Consensus       125 rDkTiklwnt~g~  137 (315)
T KOG0279|consen  125 RDKTIKLWNTLGV  137 (315)
T ss_pred             Ccceeeeeeeccc
Confidence            9999999998764

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.47  E-value=1.9e-13  Score=104.85  Aligned_cols=90  Identities=19%  Similarity=0.309  Sum_probs=66.5

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS--GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~--g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++.                               +.++|+||+||++|||++  |..||...+..+....
T Consensus       166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~  245 (296)
T cd05095         166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN  245 (296)
T ss_pred             CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence            5779999999872                               457999999999999998  7899987666554443


Q ss_pred             HHh----CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISV----ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ...    .......+....+++.+++|+.+||+.+|.+||++.++.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         246 TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            321    0000111112357899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.47  E-value=1.9e-13  Score=104.72  Aligned_cols=91  Identities=21%  Similarity=0.331  Sum_probs=67.9

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS--GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~--g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++.                               +.++|+|||||++|+|++  |..||...+..+...
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~  243 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE  243 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence            35689999999872                               568999999999999988  778998776666555


Q ss_pred             HHHhC----CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVA----DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+...    ............++.+.+|+.+|++.+|++||++.++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            44321    011111122357899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0200|consensus

Probab=99.47  E-value=1.6e-13  Score=114.62  Aligned_cols=87  Identities=25%  Similarity=0.477  Sum_probs=72.4

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCC-HHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDES-EEETRA   48 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~-~~~~~~   48 (205)
                      +..+||+|||+|                                |+.++||||+||++||+.+ |..||.+.. ..++..
T Consensus       454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~  533 (609)
T KOG0200|consen  454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE  533 (609)
T ss_pred             CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH
Confidence            458999999999                                3889999999999999998 999999865 566666


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+..+.....+   ..++++.+++++.||..+|++||++.++.+
T Consensus       534 ~l~~G~r~~~P---~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  534 FLKEGNRMEQP---EHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHhcCCCCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            66666543222   367999999999999999999999988764

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.47  E-value=2.2e-13  Score=103.51  Aligned_cols=87  Identities=21%  Similarity=0.360  Sum_probs=71.5

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||.+.                               +.++|+||+||++||+++ |+.||.+....+....+
T Consensus       145 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~  224 (279)
T cd05057         145 PQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLL  224 (279)
T ss_pred             CCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            5789999999762                               567999999999999998 99999988887777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ........+   ...+.++.+++.+||..+|.+||++.++++
T Consensus       225 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         225 EKGERLPQP---PICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             hCCCCCCCC---CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            654332111   247889999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.46  E-value=1.8e-13  Score=102.88  Aligned_cols=85  Identities=24%  Similarity=0.355  Sum_probs=64.3

Q ss_pred             CeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhCCCC
Q psy14043          4 AVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSG-VSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         4 ~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g-~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      +.+|++|||.+                          ++.++|+||+||++|+|++| .+||...+....... ......
T Consensus       145 ~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~~~  223 (258)
T cd05078         145 PFIKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YEDRHQ  223 (258)
T ss_pred             ceEEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHcccc
Confidence            45899999987                          25579999999999999998 577766555443332 233333


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ++.    ..+.++.+++.+||+.+|++||++.++++.
T Consensus       224 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         224 LPA----PKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             CCC----CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            333    356889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0289|consensus

Probab=99.46  E-value=1.6e-13  Score=105.29  Aligned_cols=75  Identities=28%  Similarity=0.459  Sum_probs=69.7

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ...+.+|||||..+++|..|+.+++||+.+..              ....|-||+++|.+++|+.+|.+||++..|+.|+
T Consensus       349 ~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~--------------~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~  414 (506)
T KOG0289|consen  349 EYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT--------------NVAKFPGHTGPVKAISFSENGYWLATAADDGSVK  414 (506)
T ss_pred             eeEEeeEcCCceEEeccCCCceEEEEEcCCcc--------------ccccCCCCCCceeEEEeccCceEEEEEecCCeEE
Confidence            46788999999999999999999999999886              4568899999999999999999999999999999


Q ss_pred             EEeecCCCC
Q psy14043        186 VWMLYKEKN  194 (205)
Q Consensus       186 ~wd~~~~~~  194 (205)
                      +||+++-++
T Consensus       415 lwDLRKl~n  423 (506)
T KOG0289|consen  415 LWDLRKLKN  423 (506)
T ss_pred             EEEehhhcc
Confidence            999998775

>KOG0272|consensus

Probab=99.46  E-value=4.3e-14  Score=107.87  Aligned_cols=80  Identities=20%  Similarity=0.277  Sum_probs=73.1

Q ss_pred             ccCCCccccccccccC--CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        100 AIPNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~--~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      ...|...+.++.|+|.  +..+|+++.||++++|++++..              ..+.++||..+|..|+|+|+|++|+|
T Consensus       213 l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~--------------~l~~l~gH~~RVs~VafHPsG~~L~T  278 (459)
T KOG0272|consen  213 LRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET--------------PLQDLEGHLARVSRVAFHPSGKFLGT  278 (459)
T ss_pred             EeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc--------------chhhhhcchhhheeeeecCCCceeee
Confidence            3467778899999998  5789999999999999999876              67899999999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      +|.|.+.++||+.++.
T Consensus       279 asfD~tWRlWD~~tk~  294 (459)
T KOG0272|consen  279 ASFDSTWRLWDLETKS  294 (459)
T ss_pred             cccccchhhcccccch
Confidence            9999999999999875

>KOG1290|consensus

Probab=99.46  E-value=8.6e-14  Score=108.94  Aligned_cols=100  Identities=26%  Similarity=0.398  Sum_probs=71.8

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE------SEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~------~~~~~~~~i   50 (205)
                      +-.+||+|||-|                          |+..+||||++|++|||+||...|.-.      ..++.+..|
T Consensus       390 di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i  469 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI  469 (590)
T ss_pred             ceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence            357899999999                          499999999999999999999998522      112233333


Q ss_pred             HhCCCCCCCC-------------------------cC---------CC----CCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPE-------------------------QC---------GH----ISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~-------------------------~~---------~~----~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ....-.+|+.                         .|         -.    -..++.+|+.-||+++|++|+++.++++
T Consensus       470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            2211111110                         00         01    2357779999999999999999999999


Q ss_pred             cchhhhcccC
Q psy14043         93 VAWFAEIAIP  102 (205)
Q Consensus        93 ~~~~~~~~~~  102 (205)
                      |||+..+..+
T Consensus       550 hPwLn~~~~~  559 (590)
T KOG1290|consen  550 HPWLNPVAGP  559 (590)
T ss_pred             CccccCCCCC
Confidence            9999877654

>KOG4257|consensus

Probab=99.46  E-value=3.9e-14  Score=114.07  Aligned_cols=87  Identities=25%  Similarity=0.418  Sum_probs=75.1

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      +.++||+|||++.                              +.++|||-|||+++|.+. |..||.+-.+.+.+-.|.
T Consensus       527 p~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE  606 (974)
T KOG4257|consen  527 PQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE  606 (974)
T ss_pred             cceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec
Confidence            5689999999992                              899999999999999877 999999998888888888


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ++.....+   +++++.++.++.+||.++|.+||.+.++..
T Consensus       607 nGeRlP~P---~nCPp~LYslmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  607 NGERLPCP---PNCPPALYSLMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             CCCCCCCC---CCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence            87653322   379999999999999999999999876553

>KOG0279|consensus

Probab=99.45  E-value=2.4e-13  Score=98.97  Aligned_cols=77  Identities=25%  Similarity=0.375  Sum_probs=72.4

Q ss_pred             CccccccccccC--CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        104 NTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       104 ~~~~~~~~~~~~--~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      ..-++|+.|+|.  ...+++++.|+++|+||+++.+              +..++-||++-|+.+++||||..++||+.|
T Consensus       148 ~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~--------------l~~~~~gh~~~v~t~~vSpDGslcasGgkd  213 (315)
T KOG0279|consen  148 REWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ--------------LRTTFIGHSGYVNTVTVSPDGSLCASGGKD  213 (315)
T ss_pred             cCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc--------------hhhccccccccEEEEEECCCCCEEecCCCC
Confidence            567899999998  6899999999999999999887              778899999999999999999999999999


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      |.+.+||+..+++
T Consensus       214 g~~~LwdL~~~k~  226 (315)
T KOG0279|consen  214 GEAMLWDLNEGKN  226 (315)
T ss_pred             ceEEEEEccCCce
Confidence            9999999999887

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.45  E-value=2.3e-13  Score=102.85  Aligned_cols=74  Identities=23%  Similarity=0.491  Sum_probs=59.9

Q ss_pred             CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.++||||+||++|||++ |..||...+..+....+.... ..+.  ...++..+.+++.+||..+|++||++.+++.
T Consensus       189 ~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         189 TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY-RLPP--PMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             cchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-cCCC--cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            557999999999999886 999998887777777765432 2222  2357899999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG1035|consensus

Probab=99.45  E-value=1.2e-13  Score=118.05  Aligned_cols=80  Identities=26%  Similarity=0.380  Sum_probs=66.2

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      |+.|+||||||||+|||+.   ||.. +....++..+.++..+.+...+....+....+|.+||+.||++||++.+++++
T Consensus       795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence            4899999999999999995   6854 34455777878777777744455667888899999999999999999999999


Q ss_pred             chhh
Q psy14043         94 AWFA   97 (205)
Q Consensus        94 ~~~~   97 (205)
                      .++.
T Consensus       872 ~llp  875 (1351)
T KOG1035|consen  872 ELLP  875 (1351)
T ss_pred             cCCC
Confidence            8875

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.45  E-value=2.3e-13  Score=102.61  Aligned_cols=84  Identities=20%  Similarity=0.339  Sum_probs=63.5

Q ss_pred             eEEEEecCCC--------------------------CCcchhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHhCCCCC
Q psy14043          5 VLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILL-SGVSPFLDESEEETRAHISVADYSF   57 (205)
Q Consensus         5 ~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll-~g~~pf~~~~~~~~~~~i~~~~~~~   57 (205)
                      .+|++|||++                          ++.++||||+||++|||+ .|..||......+... +.......
T Consensus       150 ~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~~  228 (262)
T cd05077         150 FIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCML  228 (262)
T ss_pred             eeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCccC
Confidence            4899999976                          255789999999999997 5899987765544332 22222222


Q ss_pred             CCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         58 PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        58 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..    ..++++++||.+||+.+|.+||++.+++++
T Consensus       229 ~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         229 VT----PSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CC----CChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            22    246789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.44  E-value=4.9e-13  Score=101.04  Aligned_cols=76  Identities=24%  Similarity=0.372  Sum_probs=56.9

Q ss_pred             CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh-CCCCCCCC-cCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISV-ADYSFPPE-QCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.++||||+||++|||++ |..||......+.+..+.. .....+.. ....+++...+++..|+ .+|++||++.++.+
T Consensus       187 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         187 TKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             chhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            347999999999999999 8899987776665555443 32233322 23357889999999988 59999999988764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.44  E-value=4.3e-13  Score=107.05  Aligned_cols=89  Identities=24%  Similarity=0.460  Sum_probs=68.8

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++|+||+||++|||++ |..||......+.....
T Consensus       275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~  354 (401)
T cd05107         275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNA  354 (401)
T ss_pred             CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHH
Confidence            5789999999872                               557899999999999998 89999876555544443


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .......+  .+..++.++.+++.+||..+|.+||++.++++.
T Consensus       355 ~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         355 IKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            33222211  223578999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.44  E-value=2.5e-13  Score=103.40  Aligned_cols=88  Identities=24%  Similarity=0.317  Sum_probs=63.7

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH--H--
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE--E--   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~--~--   45 (205)
                      +++.+||+|||++.                                +.++|||||||++|+|++|..||......  +  
T Consensus       142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~  221 (283)
T cd05080         142 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMI  221 (283)
T ss_pred             CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhh
Confidence            35789999999861                                56799999999999999999998643211  0  


Q ss_pred             -----------HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         46 -----------TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        46 -----------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                 ....+... ...  .....++.++++++.+||..+|++||++.++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         222 GPKQGQMTVVRLIELLERG-MRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             cccccccchhhhhhhhhcC-CCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                       11111111 111  112357899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.43  E-value=5.5e-13  Score=100.81  Aligned_cols=75  Identities=21%  Similarity=0.349  Sum_probs=54.9

Q ss_pred             cchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh-CCCCCCCC-cCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         17 PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISV-ADYSFPPE-QCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .++|+||+||++|||++ |..||......+....... .....+.+ .....++..++++.+|+ .+|++||++.++..
T Consensus       188 ~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         188 KESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             ccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            47899999999999996 9999987766655444332 22222221 12246788999999998 68999999998864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0291|consensus

Probab=99.43  E-value=2.6e-13  Score=110.32  Aligned_cols=108  Identities=19%  Similarity=0.363  Sum_probs=94.3

Q ss_pred             ccCcCCCCCcccccccchhhhcccCCCccccccccccCCCeeeecccccc-eEEEEecCCCCcchhhhhhcccceeceec
Q psy14043         78 NTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGL-LKVLKLDTGKESTGQVAAANVNLAMNQSL  156 (205)
Q Consensus        78 ~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~  156 (205)
                      ...-+.+..+.++.+..-++....|...+..|++..|.|..+..|+.|.. |.+|++.+++              +...+
T Consensus       409 ssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq--------------llDiL  474 (893)
T KOG0291|consen  409 SSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ--------------LLDIL  474 (893)
T ss_pred             EeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe--------------eeehh
Confidence            33445666778888888888888889899999999999999999988865 9999999998              77899


Q ss_pred             ccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCCCCCCcC
Q psy14043        157 QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKL  199 (205)
Q Consensus       157 ~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~~~~~~~  199 (205)
                      +||.++|.+++|+|+|..|||+|+|+|||+||+.....+.+++
T Consensus       475 sGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl  517 (893)
T KOG0291|consen  475 SGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETL  517 (893)
T ss_pred             cCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeE
Confidence            9999999999999999999999999999999998876655544

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.43  E-value=4.7e-13  Score=104.87  Aligned_cols=89  Identities=22%  Similarity=0.358  Sum_probs=67.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEE-ETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~-~~~~   48 (205)
                      .++.+||+|||++                               ++.++|+||+||++|+|++ |..||.+.... ....
T Consensus       214 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  293 (343)
T cd05103         214 ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  293 (343)
T ss_pred             CCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH
Confidence            3678999999976                               2567899999999999997 99999765433 3333


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+..+... +  .....++++.+++.+||+.+|++||++.++++|
T Consensus       294 ~~~~~~~~-~--~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         294 RLKEGTRM-R--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHhccCCC-C--CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            33333221 1  112468899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0194|consensus

Probab=99.42  E-value=9.5e-14  Score=110.65  Aligned_cols=88  Identities=27%  Similarity=0.490  Sum_probs=76.9

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++++||+|||++                             |+.++||||+||++||+.+ |..||.+....++...|..
T Consensus       298 ~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~  377 (474)
T KOG0194|consen  298 KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK  377 (474)
T ss_pred             CCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence            467899999999                             4999999999999999988 8999999999999999976


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..++.+.+.  ..+.+...++.+|+..+|++|+++.++.+
T Consensus       378 ~~~r~~~~~--~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  378 NGYRMPIPS--KTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             cCccCCCCC--CCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            666555432  67899999999999999999999988765

>KOG0318|consensus

Probab=99.42  E-value=5.9e-13  Score=104.35  Aligned_cols=82  Identities=20%  Similarity=0.379  Sum_probs=72.4

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc---cceeeEEEEEEcCCCCEE
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ---GHSGKVRAIIWNEQYEKL  175 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---gh~~~v~~~~~s~~~~~l  175 (205)
                      ....|...+++++++|||..+|+.+.|+.+.++|=.++.              ....+.   +|.+.|.+++||||++.+
T Consensus       185 s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge--------------~vg~l~~~~aHkGsIfalsWsPDs~~~  250 (603)
T KOG0318|consen  185 SFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE--------------KVGELEDSDAHKGSIFALSWSPDSTQF  250 (603)
T ss_pred             cccccccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--------------EEEEecCCCCccccEEEEEECCCCceE
Confidence            345667789999999999999999999999999998887              334444   899999999999999999


Q ss_pred             EeecCCCcEEEEeecCCCC
Q psy14043        176 TSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       176 as~~~d~~i~~wd~~~~~~  194 (205)
                      +|+|.|+++||||+.+.+.
T Consensus       251 ~T~SaDkt~KIWdVs~~sl  269 (603)
T KOG0318|consen  251 LTVSADKTIKIWDVSTNSL  269 (603)
T ss_pred             EEecCCceEEEEEeeccce
Confidence            9999999999999998753

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.42  E-value=8.7e-13  Score=99.75  Aligned_cols=75  Identities=23%  Similarity=0.336  Sum_probs=56.1

Q ss_pred             cchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC-CCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         17 PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD-YSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~-~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .++||||+||++|||++ |..||...+..+.+..+.... ...+ +.....+++.+++++..|+ .+|++||++.++++
T Consensus       187 ~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         187 KPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            46999999999999997 688998777766666554332 2222 2222357899999999999 67999999998854

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0319|consensus

Probab=99.41  E-value=4.5e-13  Score=108.53  Aligned_cols=80  Identities=20%  Similarity=0.374  Sum_probs=73.7

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+++++.+|+.+.+|+||.|++.++|+++...              +..+|+||+..|++|.|++..+.+||||
T Consensus       459 ~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~--------------l~~vLsGH~RGvw~V~Fs~~dq~laT~S  524 (775)
T KOG0319|consen  459 ERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR--------------LLGVLSGHTRGVWCVSFSKNDQLLATCS  524 (775)
T ss_pred             HHhhcccccceEecCCCceEEecccccceeeecccCce--------------EEEEeeCCccceEEEEeccccceeEecc
Confidence            34678889999999999999999999999999999554              7889999999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|+||+||.+.+..
T Consensus       525 gD~TvKIW~is~fS  538 (775)
T KOG0319|consen  525 GDKTVKIWSISTFS  538 (775)
T ss_pred             CCceEEEEEeccce
Confidence            99999999987753

>KOG0640|consensus

Probab=99.41  E-value=1.4e-12  Score=96.54  Aligned_cols=164  Identities=14%  Similarity=0.171  Sum_probs=107.8

Q ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc---cccc---------
Q psy14043         25 GVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG---QLLQ---------   92 (205)
Q Consensus        25 G~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~---~~l~---------   92 (205)
                      +-++|.|+.++.-|.+.  .++...+.+.... |.. ..--+..+..|+...|+..-+.-..+.   .++.         
T Consensus        11 re~lyrLiisqL~ydg~--~qiA~~lan~~~~-~~~-~~~PserLl~lv~~gmq~~~d~~~~~~~~S~~~~t~p~~~giD   86 (430)
T KOG0640|consen   11 REILYRLIISQLRYDGL--SQIASALANATMT-PAN-ICAPSERLLHLVAKGMQAENDGDLRAVSSSVLLITTPVTAGID   86 (430)
T ss_pred             HHHHHHHHHHHHhhccH--HHHHHHHHHhhcC-cCC-CCCCHHHHHHHHHHHhhcccCcceecccccccceeccCcCcee
Confidence            34678887777776543  3333333321111 110 112367888888888876543322111   1111         


Q ss_pred             --------------cchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhh---ccc-ceece
Q psy14043         93 --------------VAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAA---NVN-LAMNQ  154 (205)
Q Consensus        93 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~---~~~-~~~~~  154 (205)
                                    +.|.......|..++++.+|++||..+|+|+.|..|+|+|++.-..++...+..   +.. .-+.+
T Consensus        87 le~dadaq~~s~e~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIR  166 (430)
T KOG0640|consen   87 LEFDADAQGSSPEPSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIR  166 (430)
T ss_pred             eeeccccccCCCCCcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEe
Confidence                          122233345677889999999999999999999999999998543332222111   111 13678


Q ss_pred             ecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       155 ~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                      +|..|.+.|+++.|+|..+.|+|++.|++|+++|..+.
T Consensus       167 TlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~  204 (430)
T KOG0640|consen  167 TLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKT  204 (430)
T ss_pred             ehhhccCcccceeecchhheEEeccCCCeEEEEecccH
Confidence            99999999999999999999999999999999999764

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.41  E-value=6.8e-13  Score=100.73  Aligned_cols=85  Identities=25%  Similarity=0.382  Sum_probs=65.0

Q ss_pred             CeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          4 AVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILL-SGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         4 ~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll-~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ..+|++|||.+                          ++.++|+||+||++||++ +|+.||......+....+.. ...
T Consensus       161 ~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~  239 (274)
T cd05076         161 PFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK-KHR  239 (274)
T ss_pred             ceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh-ccC
Confidence            35899999975                          266899999999999984 69999987665544333332 223


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+.    ..++++.++|.+||+.+|++||++.+++++
T Consensus       240 ~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         240 LPE----PSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             CCC----CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            332    356789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1027|consensus

Probab=99.41  E-value=4.9e-14  Score=116.27  Aligned_cols=91  Identities=30%  Similarity=0.485  Sum_probs=71.6

Q ss_pred             CeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          4 AVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         4 ~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ..++|+|||+++                                ..++||+|+||++|+.++ |.+||.  +..+...+|
T Consensus       648 ~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG--d~~~R~~NI  725 (903)
T KOG1027|consen  648 LRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG--DSLERQANI  725 (903)
T ss_pred             eeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC--chHHhhhhh
Confidence            568899999993                                678999999999999988 599995  344455667


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      ..+.+....-.. .-..++++||.+|+..+|..||++.+++.||+|-
T Consensus       726 l~~~~~L~~L~~-~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  726 LTGNYTLVHLEP-LPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             hcCccceeeecc-CchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence            766654432211 1122999999999999999999999999999983

>KOG0606|consensus

Probab=99.40  E-value=2.5e-13  Score=114.92  Aligned_cols=86  Identities=29%  Similarity=0.494  Sum_probs=76.6

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC---Cccccc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP---TAGQLL   91 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~l   91 (205)
                      |+..+|||++|+++||++.|+.||.+++.++++..+......+|.. ....+++++++|.++|+.+|..|.   .+.++.
T Consensus       235 ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk  313 (1205)
T KOG0606|consen  235 YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVK  313 (1205)
T ss_pred             cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhh
Confidence            5999999999999999999999999999999999999988888876 345899999999999999999995   466788


Q ss_pred             ccchhhhccc
Q psy14043         92 QVAWFAEIAI  101 (205)
Q Consensus        92 ~~~~~~~~~~  101 (205)
                      +|.||....+
T Consensus       314 ~h~ff~~LDw  323 (1205)
T KOG0606|consen  314 QHGFFQLLDW  323 (1205)
T ss_pred             hccceeeccc
Confidence            9999976554

>PTZ00421 coronin; Provisional

Probab=99.40  E-value=1e-12  Score=106.87  Aligned_cols=79  Identities=18%  Similarity=0.306  Sum_probs=70.8

Q ss_pred             cCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...+.+++|+|.+ ..+++++.|+.+++||+.++.              ....+.+|...|.+++|+|+|..|++++
T Consensus       122 ~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~--------------~~~~l~~h~~~V~sla~spdG~lLatgs  187 (493)
T PTZ00421        122 QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK--------------AVEVIKCHSDQITSLEWNLDGSLLCTTS  187 (493)
T ss_pred             cCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe--------------EEEEEcCCCCceEEEEEECCCCEEEEec
Confidence            3566788999999986 689999999999999998875              4567889999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|++||+.+++
T Consensus       188 ~Dg~IrIwD~rsg~  201 (493)
T PTZ00421        188 KDKKLNIIDPRDGT  201 (493)
T ss_pred             CCCEEEEEECCCCc
Confidence            99999999998765

>KOG0285|consensus

Probab=99.40  E-value=7.4e-13  Score=99.59  Aligned_cols=83  Identities=25%  Similarity=0.374  Sum_probs=76.6

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .+...|...++++++.|.+.|+++|+.|++++|||++++.              +..++.||-..|..+++|+...+|.|
T Consensus       145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--------------LkltltGhi~~vr~vavS~rHpYlFs  210 (460)
T KOG0285|consen  145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--------------LKLTLTGHIETVRGVAVSKRHPYLFS  210 (460)
T ss_pred             hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--------------EEEeecchhheeeeeeecccCceEEE
Confidence            4455677789999999999999999999999999999998              77899999999999999999999999


Q ss_pred             ecCCCcEEEEeecCCCC
Q psy14043        178 SDETGLIIVWMLYKEKN  194 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~  194 (205)
                      |+.|++|++||+...+.
T Consensus       211 ~gedk~VKCwDLe~nkv  227 (460)
T KOG0285|consen  211 AGEDKQVKCWDLEYNKV  227 (460)
T ss_pred             ecCCCeeEEEechhhhh
Confidence            99999999999988764

>KOG0664|consensus

Probab=99.40  E-value=5.5e-13  Score=97.98  Aligned_cols=97  Identities=25%  Similarity=0.318  Sum_probs=75.9

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      |-++||||||+|                               |+.++||||+||++.|++-.+..|...++.+.++.|.
T Consensus       192 NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lIt  271 (449)
T KOG0664|consen  192 NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMII  271 (449)
T ss_pred             CceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHH
Confidence            568999999999                               5999999999999999999999999888888777774


Q ss_pred             hC-----------------------CCCCCCC-------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VA-----------------------DYSFPPE-------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~-----------------------~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..                       ....|..       ....-..+..+++.+++..+|++|++.++.+.|+++.+.
T Consensus       272 dLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  272 DLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             HHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            31                       1111100       011234567789999999999999999999999998654

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.39  E-value=1.5e-12  Score=98.69  Aligned_cols=89  Identities=22%  Similarity=0.397  Sum_probs=72.1

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+|++|||.+.                              +.++|+||+||++|++++ |..||...........+.
T Consensus       153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~  232 (275)
T cd05046         153 QREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ  232 (275)
T ss_pred             CCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH
Confidence            5678999999761                              556899999999999998 899998777777777776


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......+.  ...++..+.+++.+||..+|++||++.+++..
T Consensus       233 ~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         233 AGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             cCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            55544432  23578999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0315|consensus

Probab=99.38  E-value=1.5e-12  Score=93.57  Aligned_cols=79  Identities=18%  Similarity=0.196  Sum_probs=70.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .++..+....++|+++++|++|.|.+++||+.+...             .+...++||.+.|+..+||.||++|++|+.|
T Consensus       213 ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~-------------kle~~l~gh~rWvWdc~FS~dg~YlvTassd  279 (311)
T KOG0315|consen  213 AHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFF-------------KLELVLTGHQRWVWDCAFSADGEYLVTASSD  279 (311)
T ss_pred             cccceEEEEEECCCCcEEEeecCCceEEEEecCCce-------------eeEEEeecCCceEEeeeeccCccEEEecCCC
Confidence            344556667799999999999999999999998762             1567889999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      +++++||+..++
T Consensus       280 ~~~rlW~~~~~k  291 (311)
T KOG0315|consen  280 HTARLWDLSAGK  291 (311)
T ss_pred             CceeecccccCc
Confidence            999999999876

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.37  E-value=1.8e-12  Score=105.53  Aligned_cols=78  Identities=19%  Similarity=0.220  Sum_probs=56.4

Q ss_pred             hhHHHHHHHHHHHHcCCC-CCCCCCHHH-----------HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCc---CC
Q psy14043         19 TDMWSLGVLLYILLSGVS-PFLDESEEE-----------TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA---DK   83 (205)
Q Consensus        19 ~DvwslG~~~~~ll~g~~-pf~~~~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~   83 (205)
                      .|+||+||++|+|++|.. ||.+.....           ....+....+.++  .+...++.+++|+.++|.++|   .+
T Consensus       413 ~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~  490 (507)
T PLN03224        413 FDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS--LLDRNKEAGWDLACKLITKRDQANRG  490 (507)
T ss_pred             cchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc--cccccChHHHHHHHHHhccCCCCccc
Confidence            699999999999999875 775421111           1111222233333  345689999999999999876   68


Q ss_pred             CCCcccccccchhhh
Q psy14043         84 RPTAGQLLQVAWFAE   98 (205)
Q Consensus        84 R~~~~~~l~~~~~~~   98 (205)
                      |+++.++++||||..
T Consensus       491 RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        491 RLSVGQALSHRFFLP  505 (507)
T ss_pred             CCCHHHHhCCCCcCC
Confidence            999999999999964

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.36  E-value=8.2e-13  Score=100.40  Aligned_cols=89  Identities=20%  Similarity=0.325  Sum_probs=64.7

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHH----
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEE----   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~----   45 (205)
                      +++.+||+|||++.                                +.++|+||+||++|||++|..||.......    
T Consensus       144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~  223 (284)
T cd05038         144 SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMI  223 (284)
T ss_pred             CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccc
Confidence            35789999999772                                556999999999999999999986542211    


Q ss_pred             ----------HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         46 ----------TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        46 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                ............+.  ...++.++.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         224 GIAQGQMIVTRLLELLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             ccccccccHHHHHHHHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                      11122222222221  2356789999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0196|consensus

Probab=99.36  E-value=2e-13  Score=112.25  Aligned_cols=88  Identities=24%  Similarity=0.442  Sum_probs=77.1

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +.++||+|||+++                                +.++||||+|++++|.+. |..||...++.+.+..
T Consensus       767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka  846 (996)
T KOG0196|consen  767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA  846 (996)
T ss_pred             ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH
Confidence            5689999999992                                889999999999998766 9999999999999999


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      |.++-...|+.   +++..+..|+..||+++-.+||.+.+++.+
T Consensus       847 Ie~gyRLPpPm---DCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  847 IEQGYRLPPPM---DCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHhccCCCCCC---CCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence            99864433332   689999999999999999999999998764

>KOG0291|consensus

Probab=99.36  E-value=2.3e-12  Score=104.93  Aligned_cols=81  Identities=25%  Similarity=0.377  Sum_probs=75.8

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+++++.+|||+++|+|+.|+.||+||..++.              +..+|..|++.|+++.|+..|+.+.|+|-
T Consensus       347 QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf--------------C~vTFteHts~Vt~v~f~~~g~~llssSL  412 (893)
T KOG0291|consen  347 QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF--------------CFVTFTEHTSGVTAVQFTARGNVLLSSSL  412 (893)
T ss_pred             cccccceeeEEECCCCcEEEeccCCCcEEEEeccCce--------------EEEEeccCCCceEEEEEEecCCEEEEeec
Confidence            3566789999999999999999999999999999987              77899999999999999999999999999


Q ss_pred             CCcEEEEeecCCCCC
Q psy14043        181 TGLIIVWMLYKEKNP  195 (205)
Q Consensus       181 d~~i~~wd~~~~~~~  195 (205)
                      ||+|+.||+...++.
T Consensus       413 DGtVRAwDlkRYrNf  427 (893)
T KOG0291|consen  413 DGTVRAWDLKRYRNF  427 (893)
T ss_pred             CCeEEeeeeccccee
Confidence            999999999988764

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.35  E-value=1.9e-12  Score=98.64  Aligned_cols=89  Identities=20%  Similarity=0.251  Sum_probs=63.3

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC-------
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES-------   42 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~-------   42 (205)
                      +++.+||+|||++                                ++.++|+||+||++|+|+++..|+....       
T Consensus       144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~  223 (284)
T cd05079         144 SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI  223 (284)
T ss_pred             CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence            4678999999976                                1567999999999999999876653210       


Q ss_pred             --------HHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         43 --------EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        43 --------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                              .......+.... ..+  .+..++..+.+|+.+||+.+|++||++.++++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         224 GPTHGQMTVTRLVRVLEEGK-RLP--RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             ccccccccHHHHHHHHHcCc-cCC--CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                    111112222221 111  234689999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1332|consensus

Probab=99.34  E-value=2.4e-12  Score=92.38  Aligned_cols=88  Identities=20%  Similarity=0.333  Sum_probs=76.2

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC--CCCEE
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QYEKL  175 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~--~~~~l  175 (205)
                      .+...|...+..+.....|+.+|++++|++|||+.+....++           .+..+|.||+++|+.++|.+  .|..|
T Consensus         5 ~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s-----------~ll~~L~Gh~GPVwqv~wahPk~G~iL   73 (299)
T KOG1332|consen    5 TIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQS-----------KLLAELTGHSGPVWKVAWAHPKFGTIL   73 (299)
T ss_pred             ehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCc-----------eeeeEecCCCCCeeEEeecccccCcEe
Confidence            345567777888888999999999999999999999876632           26689999999999999976  89999


Q ss_pred             EeecCCCcEEEEeecCCCCCC
Q psy14043        176 TSSDETGLIIVWMLYKEKNPQ  196 (205)
Q Consensus       176 as~~~d~~i~~wd~~~~~~~~  196 (205)
                      |||++||.|.||.-.+++|.+
T Consensus        74 AScsYDgkVIiWke~~g~w~k   94 (299)
T KOG1332|consen   74 ASCSYDGKVIIWKEENGRWTK   94 (299)
T ss_pred             eEeecCceEEEEecCCCchhh
Confidence            999999999999988887754

>KOG0295|consensus

Probab=99.34  E-value=3.2e-12  Score=96.17  Aligned_cols=79  Identities=23%  Similarity=0.405  Sum_probs=68.2

Q ss_pred             cCCCccccccccccC---------------CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEE
Q psy14043        101 IPNNTKVNCLAWHQN---------------QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA  165 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~---------------~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~  165 (205)
                      ..|..++.+++|.|.               +..+.+++.|++||+||+.++.              +..++.||...|.+
T Consensus       274 R~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~--------------cL~tL~ghdnwVr~  339 (406)
T KOG0295|consen  274 REHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM--------------CLFTLVGHDNWVRG  339 (406)
T ss_pred             hccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe--------------EEEEEecccceeee
Confidence            344555666666542               2589999999999999999997              78899999999999


Q ss_pred             EEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        166 IIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       166 ~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      ++|+|.|++|+||..||+++|||+.+.+
T Consensus       340 ~af~p~Gkyi~ScaDDktlrvwdl~~~~  367 (406)
T KOG0295|consen  340 VAFSPGGKYILSCADDKTLRVWDLKNLQ  367 (406)
T ss_pred             eEEcCCCeEEEEEecCCcEEEEEeccce
Confidence            9999999999999999999999998865

>KOG0587|consensus

Probab=99.34  E-value=4.2e-13  Score=111.42  Aligned_cols=96  Identities=24%  Similarity=0.358  Sum_probs=82.4

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .+|.|||+|||.+                                  |+..+|+||||++..||.-|.+|+-...+...+
T Consensus       158 ~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL  237 (953)
T KOG0587|consen  158 ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL  237 (953)
T ss_pred             ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh
Confidence            4688999999998                                  588999999999999999999999988887777


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      -.|-.++++ ....+..+++++.+||..||.+|-++||...++++|||+.+
T Consensus       238 F~IpRNPPP-kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  238 FLIPRNPPP-KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             ccCCCCCCc-cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            776655432 12235678999999999999999999999999999999973

>KOG0275|consensus

Probab=99.34  E-value=1.3e-12  Score=97.40  Aligned_cols=90  Identities=22%  Similarity=0.382  Sum_probs=74.2

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .+.......+.|..|+||++++++|+.||.+.+|++.++........++.      ..|.-|.++|.|++||.|...|||
T Consensus       207 ~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAq------d~fMMmd~aVlci~FSRDsEMlAs  280 (508)
T KOG0275|consen  207 SIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQ------DNFMMMDDAVLCISFSRDSEMLAS  280 (508)
T ss_pred             heecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhh------cceeecccceEEEeecccHHHhhc
Confidence            44455666788999999999999999999999999998875433332222      244568899999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.||.|+||.+.+|.
T Consensus       281 GsqDGkIKvWri~tG~  296 (508)
T KOG0275|consen  281 GSQDGKIKVWRIETGQ  296 (508)
T ss_pred             cCcCCcEEEEEEecch
Confidence            9999999999999885

>PTZ00421 coronin; Provisional

Probab=99.33  E-value=4.4e-12  Score=103.15  Aligned_cols=86  Identities=16%  Similarity=0.214  Sum_probs=70.1

Q ss_pred             cCCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEee
Q psy14043        101 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~  178 (205)
                      ..|...+.+++|+| +++.+++|+.|+.|++|++.+......       .......+.+|...|.+++|+|++ ..|+||
T Consensus        72 ~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~-------~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSg  144 (493)
T PTZ00421         72 LGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQN-------ISDPIVHLQGHTKKVGIVSFHPSAMNVLASA  144 (493)
T ss_pred             eCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccc-------cCcceEEecCCCCcEEEEEeCcCCCCEEEEE
Confidence            45777899999999 788999999999999999976431000       001345788999999999999975 689999


Q ss_pred             cCCCcEEEEeecCCC
Q psy14043        179 DETGLIIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~  193 (205)
                      +.|++|+|||+.++.
T Consensus       145 s~DgtVrIWDl~tg~  159 (493)
T PTZ00421        145 GADMVVNVWDVERGK  159 (493)
T ss_pred             eCCCEEEEEECCCCe
Confidence            999999999998765

>KOG0265|consensus

Probab=99.33  E-value=6.7e-12  Score=92.37  Aligned_cols=81  Identities=19%  Similarity=0.218  Sum_probs=72.2

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..+...+....|+|++..+|+|+.|..|-+|++.....             -...++||+++|-.+.|++|+..+.|||.
T Consensus        44 ~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdce-------------N~~~lkgHsgAVM~l~~~~d~s~i~S~gt  110 (338)
T KOG0265|consen   44 PGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCE-------------NFWVLKGHSGAVMELHGMRDGSHILSCGT  110 (338)
T ss_pred             CCCcceEEEEEECCCCCeEeecCCcceEEEEecccccc-------------ceeeeccccceeEeeeeccCCCEEEEecC
Confidence            45777899999999999999999999999999866542             23467899999999999999999999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |++++.||+++|+.
T Consensus       111 Dk~v~~wD~~tG~~  124 (338)
T KOG0265|consen  111 DKTVRGWDAETGKR  124 (338)
T ss_pred             CceEEEEeccccee
Confidence            99999999999874

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.32  E-value=5.1e-12  Score=96.23  Aligned_cols=89  Identities=19%  Similarity=0.291  Sum_probs=63.0

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHH----
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEE----   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~----   45 (205)
                      +++.+||+|||++.                                +.++|+||+||++|||++|..++.......    
T Consensus       143 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~  222 (284)
T cd05081         143 SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMM  222 (284)
T ss_pred             CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhc
Confidence            35789999999762                                567999999999999999877754322110    


Q ss_pred             -----------HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         46 -----------TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        46 -----------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                 .+..+.......+  ....++.++.+|+.+||..+|++||++.++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         223 GNDKQGQMIVYHLIELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             ccccccccchHHHHHHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                       0111111122222  22357899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.32  E-value=3.6e-12  Score=109.19  Aligned_cols=75  Identities=20%  Similarity=0.240  Sum_probs=53.7

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      +.++||||+||++|||++|..||................+ ........+++.+.+++.+||+.+|++|++..+.+
T Consensus       209 S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P-~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        209 SESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSP-IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             CcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccCh-hhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            5678999999999999999999987655443332111111 11111236889999999999999999998765544

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.32  E-value=5e-12  Score=94.82  Aligned_cols=83  Identities=27%  Similarity=0.350  Sum_probs=61.9

Q ss_pred             eEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          5 VLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         5 ~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      .+||+|||++.                           +.++|+||+||++|+|++ |..||...+..+....... ...
T Consensus       146 ~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~~  224 (259)
T cd05037         146 FIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QHR  224 (259)
T ss_pred             eEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CCC
Confidence            69999999872                           457999999999999999 6888876654333333221 222


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+.    .....+.+++.+||..+|++||++.++++
T Consensus       225 ~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         225 LPM----PDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             CCC----CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            221    12479999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0286|consensus

Probab=99.32  E-value=5.7e-12  Score=92.53  Aligned_cols=79  Identities=14%  Similarity=0.261  Sum_probs=73.1

Q ss_pred             cCCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|..-+.++++.| +++.+++|+-|+..++||++++.              ..++|.||.+.|++|+|.|+|.-++|||
T Consensus       183 ~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~--------------c~qtF~ghesDINsv~ffP~G~afatGS  248 (343)
T KOG0286|consen  183 HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQ--------------CVQTFEGHESDINSVRFFPSGDAFATGS  248 (343)
T ss_pred             cCCcccEEEEecCCCCCCeEEecccccceeeeeccCcc--------------eeEeecccccccceEEEccCCCeeeecC
Confidence            36667788999999 89999999999999999999987              7799999999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++++++|++...
T Consensus       249 DD~tcRlyDlRaD~  262 (343)
T KOG0286|consen  249 DDATCRLYDLRADQ  262 (343)
T ss_pred             CCceeEEEeecCCc
Confidence            99999999998854

>KOG0285|consensus

Probab=99.31  E-value=6.3e-12  Score=94.66  Aligned_cols=80  Identities=20%  Similarity=0.370  Sum_probs=73.1

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|-..+.|++.+|.-+.+++|+.|.++++||+.+..              ....+.||+..|.+|.+.|..-.+.|||.
T Consensus       232 hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~--------------~V~~l~GH~~~V~~V~~~~~dpqvit~S~  297 (460)
T KOG0285|consen  232 HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA--------------SVHVLSGHTNPVASVMCQPTDPQVITGSH  297 (460)
T ss_pred             ccccceeEEEeccccceeEEecCCcceEEEeeecccc--------------eEEEecCCCCcceeEEeecCCCceEEecC
Confidence            4677789999999999999999999999999999886              55789999999999999997778899999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |++|++||+..++.
T Consensus       298 D~tvrlWDl~agkt  311 (460)
T KOG0285|consen  298 DSTVRLWDLRAGKT  311 (460)
T ss_pred             CceEEEeeeccCce
Confidence            99999999998874

>KOG0282|consensus

Probab=99.30  E-value=1.5e-12  Score=101.01  Aligned_cols=81  Identities=19%  Similarity=0.334  Sum_probs=73.2

Q ss_pred             cCCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...++++.|.| .+..+.+++.|+.|++|++-...             .+.+++.||+.+|.+++||.+|+.+.|+|
T Consensus       211 ~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~-------------~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s  277 (503)
T KOG0282|consen  211 SGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR-------------RCLRTFKGHRKPVRDASFNNCGTSFLSAS  277 (503)
T ss_pred             cCCccccchhhhccceeeEEEecCCCceEEEEEEecCc-------------ceehhhhcchhhhhhhhccccCCeeeeee
Confidence            46777899999999 77899999999999999997633             27799999999999999999999999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|++|++||+++|+-
T Consensus       278 fD~~lKlwDtETG~~  292 (503)
T KOG0282|consen  278 FDRFLKLWDTETGQV  292 (503)
T ss_pred             cceeeeeeccccceE
Confidence            999999999999974

>KOG1025|consensus

Probab=99.30  E-value=8.6e-12  Score=103.52  Aligned_cols=86  Identities=22%  Similarity=0.365  Sum_probs=74.5

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ..++||+|||+|                               |++++||||+||.++|++| |..|+.+....++-..+
T Consensus       834 P~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll  913 (1177)
T KOG1025|consen  834 PNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL  913 (1177)
T ss_pred             CCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH
Confidence            468999999999                               4999999999999999998 99999999999888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      ..+.. ++.  ++..+-+++-++.+||..|+..||+++++.
T Consensus       914 e~geR-Lsq--PpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  914 EKGER-LSQ--PPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             hcccc-CCC--CCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence            77654 222  236899999999999999999999987654

>KOG0313|consensus

Probab=99.30  E-value=4.1e-12  Score=96.08  Aligned_cols=85  Identities=25%  Similarity=0.453  Sum_probs=73.6

Q ss_pred             CccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEeecCCC
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSSDETG  182 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~~~d~  182 (205)
                      +...+++..++..+.+++|+.|..+++||-+++..+-           ..++|.||..-|.++.|||.. ..|+|++.|+
T Consensus       300 ~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~-----------v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~  368 (423)
T KOG0313|consen  300 NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSV-----------VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN  368 (423)
T ss_pred             CcceeEeecccccceeeecCCCCceeecCCCCCCCce-----------eEEeeecchhhhhheecCCCCceEEEEEecCC
Confidence            4467889999999999999999999999999876432           668999999999999999955 5599999999


Q ss_pred             cEEEEeecCCCCCCCcC
Q psy14043        183 LIIVWMLYKEKNPQDKL  199 (205)
Q Consensus       183 ~i~~wd~~~~~~~~~~~  199 (205)
                      ++++||+++.+.|..++
T Consensus       369 t~klWDvRS~k~plydI  385 (423)
T KOG0313|consen  369 TVKLWDVRSTKAPLYDI  385 (423)
T ss_pred             eEEEEEeccCCCcceee
Confidence            99999999988776543

>KOG1024|consensus

Probab=99.29  E-value=9e-12  Score=95.68  Aligned_cols=75  Identities=21%  Similarity=0.290  Sum_probs=65.9

Q ss_pred             CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         15 AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      |+.++|+|||||+++||.| |+.|+...++.+....++.+... .  .+-++++++..++.-||+..|++||++.|+..
T Consensus       475 yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRl-a--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  475 YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRL-A--QPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcccee-c--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            4999999999999999988 99999999999999998877532 2  22389999999999999999999999998764

>KOG1407|consensus

Probab=99.29  E-value=5.1e-12  Score=91.45  Aligned_cols=91  Identities=14%  Similarity=0.254  Sum_probs=76.5

Q ss_pred             cccccchhhhcc--cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEE
Q psy14043         89 QLLQVAWFAEIA--IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI  166 (205)
Q Consensus        89 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~  166 (205)
                      +++..|-++.+.  ..|....-|+.|+|+|+++|+|+.|..+.+||++..-              ..+.+.-|..+|..+
T Consensus       172 ~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi--------------C~R~isRldwpVRTl  237 (313)
T KOG1407|consen  172 EILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELI--------------CERCISRLDWPVRTL  237 (313)
T ss_pred             EEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhh--------------hheeeccccCceEEE
Confidence            444555444332  3455667788899999999999999999999999765              668888999999999


Q ss_pred             EEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        167 IWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       167 ~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      .||.||++|||||.|-.|-|-++.+|.
T Consensus       238 SFS~dg~~lASaSEDh~IDIA~vetGd  264 (313)
T KOG1407|consen  238 SFSHDGRMLASASEDHFIDIAEVETGD  264 (313)
T ss_pred             EeccCcceeeccCccceEEeEecccCC
Confidence            999999999999999999999998875

>KOG0319|consensus

Probab=99.28  E-value=9.9e-12  Score=100.94  Aligned_cols=82  Identities=20%  Similarity=0.351  Sum_probs=76.4

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .....|...+-++.|++..+.+|++|.|+++|||.+++..              +.++|+||+..|..+.|-.+|+.|+|
T Consensus       499 ~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fS--------------ClkT~eGH~~aVlra~F~~~~~qliS  564 (775)
T KOG0319|consen  499 GVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFS--------------CLKTFEGHTSAVLRASFIRNGKQLIS  564 (775)
T ss_pred             EEeeCCccceEEEEeccccceeEeccCCceEEEEEeccce--------------eeeeecCccceeEeeeeeeCCcEEEe
Confidence            3456788889999999999999999999999999999987              88999999999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.||-|++||+.++.
T Consensus       565 ~~adGliKlWnikt~e  580 (775)
T KOG0319|consen  565 AGADGLIKLWNIKTNE  580 (775)
T ss_pred             ccCCCcEEEEeccchh
Confidence            9999999999998864

>KOG0273|consensus

Probab=99.28  E-value=9.4e-12  Score=96.51  Aligned_cols=81  Identities=16%  Similarity=0.281  Sum_probs=70.1

Q ss_pred             CCCccccccccccCC---------CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC
Q psy14043        102 PNNTKVNCLAWHQNQ---------GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY  172 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~---------~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~  172 (205)
                      .|...+..+.|+|.+         ..+++++.|+++++||+..+.              ...+|..|..+|.+++|||+|
T Consensus       399 ~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv--------------~i~~f~kH~~pVysvafS~~g  464 (524)
T KOG0273|consen  399 AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV--------------PIHTLMKHQEPVYSVAFSPNG  464 (524)
T ss_pred             hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc--------------eeEeeccCCCceEEEEecCCC
Confidence            345556667777754         478999999999999999987              678899999999999999999


Q ss_pred             CEEEeecCCCcEEEEeecCCCCCC
Q psy14043        173 EKLTSSDETGLIIVWMLYKEKNPQ  196 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~~~~~~~~  196 (205)
                      ++||||+.||.|.+|++.+++..+
T Consensus       465 ~ylAsGs~dg~V~iws~~~~~l~~  488 (524)
T KOG0273|consen  465 RYLASGSLDGCVHIWSTKTGKLVK  488 (524)
T ss_pred             cEEEecCCCCeeEeccccchheeE
Confidence            999999999999999999987543

>KOG0273|consensus

Probab=99.27  E-value=8.2e-12  Score=96.83  Aligned_cols=80  Identities=25%  Similarity=0.493  Sum_probs=72.4

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      +.+..+++++|+-+|..+|+|+.||.+++|+....               +..+|..|+++|.++.|+.+|.+|+|++-|
T Consensus       233 ~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~---------------l~~tl~~HkgPI~slKWnk~G~yilS~~vD  297 (524)
T KOG0273|consen  233 PSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGN---------------LISTLGQHKGPIFSLKWNKKGTYILSGGVD  297 (524)
T ss_pred             CccCCcceEEecCCCCeEEEeecCcEEEEEecCch---------------hhhhhhccCCceEEEEEcCCCCEEEeccCC
Confidence            44567899999999999999999999999999865               457889999999999999999999999999


Q ss_pred             CcEEEEeecCCCCCC
Q psy14043        182 GLIIVWMLYKEKNPQ  196 (205)
Q Consensus       182 ~~i~~wd~~~~~~~~  196 (205)
                      +++.+||..++...|
T Consensus       298 ~ttilwd~~~g~~~q  312 (524)
T KOG0273|consen  298 GTTILWDAHTGTVKQ  312 (524)
T ss_pred             ccEEEEeccCceEEE
Confidence            999999998887643

>KOG1094|consensus

Probab=99.27  E-value=7.6e-12  Score=100.33  Aligned_cols=91  Identities=19%  Similarity=0.267  Sum_probs=70.9

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc--CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS--GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~--g~~pf~~~~~~~~~~   48 (205)
                      .++++||+|||++.                               +.++|+|++|+++||+++  ...||...+.++...
T Consensus       672 ~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve  751 (807)
T KOG1094|consen  672 GEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE  751 (807)
T ss_pred             CcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH
Confidence            36789999999992                               999999999999998754  899999888877766


Q ss_pred             HHHhCCCCCC----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFP----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +...--...+    ...+.-++..+..++.+|+.++..+||+++++..
T Consensus       752 n~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  752 NAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             hhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            6543211111    1122358899999999999999999999988753

>KOG0647|consensus

Probab=99.26  E-value=2e-11  Score=90.02  Aligned_cols=85  Identities=19%  Similarity=0.381  Sum_probs=70.0

Q ss_pred             cccCCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043         99 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      +..+....+..++|+|. ..+++.||-|++||+|++......            ..+....|.++|.+++||.||..+++
T Consensus        22 v~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~------------~~ka~~~~~~PvL~v~WsddgskVf~   89 (347)
T KOG0647|consen   22 VPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL------------VPKAQQSHDGPVLDVCWSDDGSKVFS   89 (347)
T ss_pred             cCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcc------------cchhhhccCCCeEEEEEccCCceEEe
Confidence            34456678999999994 467779999999999999864211            23455679999999999999999999


Q ss_pred             ecCCCcEEEEeecCCCCC
Q psy14043        178 SDETGLIIVWMLYKEKNP  195 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~~  195 (205)
                      |+.||++++||+.+++..
T Consensus        90 g~~Dk~~k~wDL~S~Q~~  107 (347)
T KOG0647|consen   90 GGCDKQAKLWDLASGQVS  107 (347)
T ss_pred             eccCCceEEEEccCCCee
Confidence            999999999999998653

>KOG0293|consensus

Probab=99.26  E-value=7.7e-12  Score=95.74  Aligned_cols=64  Identities=30%  Similarity=0.521  Sum_probs=57.8

Q ss_pred             CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeecCCCcEEEEeecCC
Q psy14043        115 NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       115 ~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~~d~~i~~wd~~~~  192 (205)
                      +..++|+||+|+.|+||+..++.              +...+.||+..|++|+|+| +...+||||.||+||||-....
T Consensus       451 ~~~fiaSGSED~kvyIWhr~sgk--------------ll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  451 NDKFIASGSEDSKVYIWHRISGK--------------LLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             CcceEEecCCCceEEEEEccCCc--------------eeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence            34799999999999999999998              7889999999999999999 5677999999999999976543

>PTZ00420 coronin; Provisional

Probab=99.26  E-value=2.3e-11  Score=99.91  Aligned_cols=87  Identities=22%  Similarity=0.336  Sum_probs=69.1

Q ss_pred             cCCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCE-EEee
Q psy14043        101 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~-las~  178 (205)
                      ..|...+.+++|+|+ +..+++|+.|+.+++|++.+........      ......+.+|...|.+++|+|++.. |+|+
T Consensus        71 ~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i------~~p~~~L~gH~~~V~sVaf~P~g~~iLaSg  144 (568)
T PTZ00420         71 KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEI------KDPQCILKGHKKKISIIDWNPMNYYIMCSS  144 (568)
T ss_pred             cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccc------ccceEEeecCCCcEEEEEECCCCCeEEEEE
Confidence            457778999999997 7899999999999999997643100000      0122457899999999999998876 6899


Q ss_pred             cCCCcEEEEeecCCC
Q psy14043        179 DETGLIIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~  193 (205)
                      +.|++|++||+.++.
T Consensus       145 S~DgtIrIWDl~tg~  159 (568)
T PTZ00420        145 GFDSFVNIWDIENEK  159 (568)
T ss_pred             eCCCeEEEEECCCCc
Confidence            999999999998875

>KOG0984|consensus

Probab=99.25  E-value=8.4e-12  Score=88.23  Aligned_cols=53  Identities=19%  Similarity=0.298  Sum_probs=46.5

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~   49 (205)
                      +|++|+||||++                                |+-++||||||+.++||.++..||.. .++.+++..
T Consensus       185 ~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq  264 (282)
T KOG0984|consen  185 DGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ  264 (282)
T ss_pred             CCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence            689999999999                                58899999999999999999999974 677888888


Q ss_pred             HHhCCC
Q psy14043         50 ISVADY   55 (205)
Q Consensus        50 i~~~~~   55 (205)
                      +...+.
T Consensus       265 vVeep~  270 (282)
T KOG0984|consen  265 VVEEPS  270 (282)
T ss_pred             HhcCCC
Confidence            876544

>KOG0284|consensus

Probab=99.25  E-value=8.1e-12  Score=95.33  Aligned_cols=77  Identities=21%  Similarity=0.384  Sum_probs=69.8

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+++++|+|...-+++++.|++++|||.....              ..+.++||...|.+++|+|.--.+||+|.|.
T Consensus       179 h~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k--------------ee~vL~GHgwdVksvdWHP~kgLiasgskDn  244 (464)
T KOG0284|consen  179 HAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK--------------EERVLRGHGWDVKSVDWHPTKGLIASGSKDN  244 (464)
T ss_pred             hhhhhheeccCCCCceeEEecCCCeEEEEeccCCc--------------hhheeccCCCCcceeccCCccceeEEccCCc
Confidence            34678999999988899999999999999998776              4467799999999999999999999999999


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      .|++||.+++.
T Consensus       245 lVKlWDprSg~  255 (464)
T KOG0284|consen  245 LVKLWDPRSGS  255 (464)
T ss_pred             eeEeecCCCcc
Confidence            99999999875

>KOG0293|consensus

Probab=99.24  E-value=1.7e-11  Score=93.92  Aligned_cols=85  Identities=18%  Similarity=0.283  Sum_probs=75.5

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      +...|...+-.+.|+++|+++|+++.|.+.-+|.+.....           +.+..++.||..+|.-+.||||.++|.+|
T Consensus       219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~-----------~kl~~tlvgh~~~V~yi~wSPDdryLlaC  287 (519)
T KOG0293|consen  219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH-----------FKLKKTLVGHSQPVSYIMWSPDDRYLLAC  287 (519)
T ss_pred             hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc-----------eeeeeeeecccCceEEEEECCCCCeEEec
Confidence            3446777889999999999999999999999999976542           34778999999999999999999999999


Q ss_pred             cCCCcEEEEeecCCCC
Q psy14043        179 DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~  194 (205)
                      +.|..+++||+.+|..
T Consensus       288 g~~e~~~lwDv~tgd~  303 (519)
T KOG0293|consen  288 GFDEVLSLWDVDTGDL  303 (519)
T ss_pred             CchHheeeccCCcchh
Confidence            9999999999999864

>KOG1034|consensus

Probab=99.24  E-value=2.8e-11  Score=90.26  Aligned_cols=81  Identities=14%  Similarity=0.273  Sum_probs=71.9

Q ss_pred             ccCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        100 AIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ...|...++.+.++|+. +++.++|.|..+++|++.+..           ++.+..-.+||++.|.++.|+.+|.+++||
T Consensus       131 ~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~-----------Cv~VfGG~egHrdeVLSvD~~~~gd~i~Sc  199 (385)
T KOG1034|consen  131 YRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDV-----------CVAVFGGVEGHRDEVLSVDFSLDGDRIASC  199 (385)
T ss_pred             eeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCe-----------EEEEecccccccCcEEEEEEcCCCCeeecc
Confidence            45777889999999987 789999999999999999876           333556678999999999999999999999


Q ss_pred             cCCCcEEEEeecC
Q psy14043        179 DETGLIIVWMLYK  191 (205)
Q Consensus       179 ~~d~~i~~wd~~~  191 (205)
                      |-|.++++|++..
T Consensus       200 GmDhslk~W~l~~  212 (385)
T KOG1034|consen  200 GMDHSLKLWRLNV  212 (385)
T ss_pred             CCcceEEEEecCh
Confidence            9999999999984

>KOG0302|consensus

Probab=99.24  E-value=2.7e-11  Score=91.75  Aligned_cols=82  Identities=24%  Similarity=0.471  Sum_probs=69.5

Q ss_pred             cCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...+..++|+|.. ..+|++|.|++|+|||++++.++.            ....+.|.+.|+.+.||.+..+||||+
T Consensus       254 ~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~------------~~~~kAh~sDVNVISWnr~~~lLasG~  321 (440)
T KOG0302|consen  254 TGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKA------------AVSTKAHNSDVNVISWNRREPLLASGG  321 (440)
T ss_pred             cccccchhhhccCCccCceEEeeecCceEEEEEecCCCccc------------eeEeeccCCceeeEEccCCcceeeecC
Confidence            4578889999999975 789999999999999999885432            123388999999999999877999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .||+++|||+++-+.
T Consensus       322 DdGt~~iwDLR~~~~  336 (440)
T KOG0302|consen  322 DDGTLSIWDLRQFKS  336 (440)
T ss_pred             CCceEEEEEhhhccC
Confidence            999999999987543

>KOG0278|consensus

Probab=99.23  E-value=4.3e-11  Score=86.38  Aligned_cols=76  Identities=26%  Similarity=0.404  Sum_probs=66.5

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceecee-cccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS-LQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      .+.+.+.+|+...+.+|+.|..+..+|+.++..              ... -+||-++|.||.|||||...||||.||+|
T Consensus       226 nV~SASL~P~k~~fVaGged~~~~kfDy~TgeE--------------i~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTi  291 (334)
T KOG0278|consen  226 NVESASLHPKKEFFVAGGEDFKVYKFDYNTGEE--------------IGSYNKGHFGPVHCVRFSPDGELYASGSEDGTI  291 (334)
T ss_pred             ccccccccCCCceEEecCcceEEEEEeccCCce--------------eeecccCCCCceEEEEECCCCceeeccCCCceE
Confidence            456778899999999999999999999999972              223 38999999999999999999999999999


Q ss_pred             EEEeecCCCCC
Q psy14043        185 IVWMLYKEKNP  195 (205)
Q Consensus       185 ~~wd~~~~~~~  195 (205)
                      ++|-+..++..
T Consensus       292 rlWQt~~~~~~  302 (334)
T KOG0278|consen  292 RLWQTTPGKTY  302 (334)
T ss_pred             EEEEecCCCch
Confidence            99988776654

>KOG0275|consensus

Probab=99.22  E-value=1.1e-11  Score=92.38  Aligned_cols=86  Identities=19%  Similarity=0.357  Sum_probs=78.3

Q ss_pred             chhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC
Q psy14043         94 AWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE  173 (205)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~  173 (205)
                      ..++.....|...+.|+.|+.|+..+.+++.|.++++..+.++.              +.+.++||++-|+...|++||.
T Consensus       296 ~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK--------------~LKEfrGHsSyvn~a~ft~dG~  361 (508)
T KOG0275|consen  296 QCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK--------------CLKEFRGHSSYVNEATFTDDGH  361 (508)
T ss_pred             hHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch--------------hHHHhcCccccccceEEcCCCC
Confidence            44456666788899999999999999999999999999999988              7789999999999999999999


Q ss_pred             EEEeecCCCcEEEEeecCCC
Q psy14043        174 KLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       174 ~las~~~d~~i~~wd~~~~~  193 (205)
                      .+.|+|.||+|+||+..+..
T Consensus       362 ~iisaSsDgtvkvW~~Ktte  381 (508)
T KOG0275|consen  362 HIISASSDGTVKVWHGKTTE  381 (508)
T ss_pred             eEEEecCCccEEEecCcchh
Confidence            99999999999999987754

>KOG0973|consensus

Probab=99.21  E-value=2.6e-11  Score=102.03  Aligned_cols=92  Identities=21%  Similarity=0.318  Sum_probs=73.9

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh-----hhhcccceeceecccceeeEEEEEEcCCCCE
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV-----AAANVNLAMNQSLQGHSGKVRAIIWNEQYEK  174 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~  174 (205)
                      ...|...++|+.|+++|+++|+|+.|+.+.+|+.+.. ......     +.--.+......+.||...|..++|+|++.+
T Consensus        65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~-~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~  143 (942)
T KOG0973|consen   65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEI-GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL  143 (942)
T ss_pred             eccccCceeEEEECCCCCeEeeccCcceEEEeeeccc-CCcccccccccccccceeeEEEEEecCCCccceeccCCCccE
Confidence            3467778999999999999999999999999999851 100000     1112233456789999999999999999999


Q ss_pred             EEeecCCCcEEEEeecCC
Q psy14043        175 LTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       175 las~~~d~~i~~wd~~~~  192 (205)
                      |+|+|.|++|.|||..+-
T Consensus       144 lvS~s~DnsViiwn~~tF  161 (942)
T KOG0973|consen  144 LVSVSLDNSVIIWNAKTF  161 (942)
T ss_pred             EEEecccceEEEEccccc
Confidence            999999999999998775

>KOG0284|consensus

Probab=99.21  E-value=3.2e-11  Score=92.17  Aligned_cols=77  Identities=25%  Similarity=0.381  Sum_probs=72.4

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|.-.+.+++|||....+++||.|..|++||..++.              ...++.+|...|.++.|++++.+|+|+|
T Consensus       218 L~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~--------------cl~tlh~HKntVl~~~f~~n~N~Llt~s  283 (464)
T KOG0284|consen  218 LRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS--------------CLATLHGHKNTVLAVKFNPNGNWLLTGS  283 (464)
T ss_pred             eccCCCCcceeccCCccceeEEccCCceeEeecCCCcc--------------hhhhhhhccceEEEEEEcCCCCeeEEcc
Confidence            35677789999999999999999999999999999998              6788999999999999999999999999


Q ss_pred             CCCcEEEEeec
Q psy14043        180 ETGLIIVWMLY  190 (205)
Q Consensus       180 ~d~~i~~wd~~  190 (205)
                      .|..+++.|++
T Consensus       284 kD~~~kv~DiR  294 (464)
T KOG0284|consen  284 KDQSCKVFDIR  294 (464)
T ss_pred             CCceEEEEehh
Confidence            99999999998

>KOG0316|consensus

Probab=99.21  E-value=3.1e-11  Score=86.38  Aligned_cols=79  Identities=15%  Similarity=0.251  Sum_probs=73.8

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...++.+.++-+|++..+++.|+++++|+.-.+.              +.++.+||...|..++.+.|+..++||+.|
T Consensus        15 ~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~--------------liktYsghG~EVlD~~~s~Dnskf~s~GgD   80 (307)
T KOG0316|consen   15 CAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA--------------LIKTYSGHGHEVLDAALSSDNSKFASCGGD   80 (307)
T ss_pred             ccccceEEEEEccCCCEEEEcCCCceEEeecccccc--------------eeeeecCCCceeeeccccccccccccCCCC
Confidence            455678999999999999999999999999998887              889999999999999999999999999999


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      +.|.+||+.+|+.
T Consensus        81 k~v~vwDV~TGkv   93 (307)
T KOG0316|consen   81 KAVQVWDVNTGKV   93 (307)
T ss_pred             ceEEEEEcccCee
Confidence            9999999999974

>KOG4283|consensus

Probab=99.20  E-value=3.2e-11  Score=88.94  Aligned_cols=103  Identities=18%  Similarity=0.396  Sum_probs=80.5

Q ss_pred             hhcccCCCccccccccccCCCe-eeecccccceEEEEecCCCCcchhh---h-hhcccceeceecccceeeEEEEEEcCC
Q psy14043         97 AEIAIPNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQV---A-AANVNLAMNQSLQGHSGKVRAIIWNEQ  171 (205)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~-lasg~~d~~i~iw~~~~~~~~~~~~---~-~~~~~~~~~~~~~gh~~~v~~~~~s~~  171 (205)
                      ......|...+..+.|+|...+ +|+|+.||.+++||+.....--...   + ..|+   ..++-..|.+.|+++||+.|
T Consensus       181 sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p---~~~~n~ah~gkvngla~tSd  257 (397)
T KOG4283|consen  181 SHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPP---ILKTNTAHYGKVNGLAWTSD  257 (397)
T ss_pred             eeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCc---cccccccccceeeeeeeccc
Confidence            3445677888999999999875 6899999999999998653210000   0 1111   22345679999999999999


Q ss_pred             CCEEEeecCCCcEEEEeecCCCCCCCcCCCC
Q psy14043        172 YEKLTSSDETGLIIVWMLYKEKNPQDKLPPL  202 (205)
Q Consensus       172 ~~~las~~~d~~i~~wd~~~~~~~~~~~~~~  202 (205)
                      |.+|++++-|..+++|+..+|.++...++|.
T Consensus       258 ~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~  288 (397)
T KOG4283|consen  258 ARYLASCGTDDRIRVWNMESGRNTLREFGPI  288 (397)
T ss_pred             chhhhhccCccceEEeecccCcccccccccc
Confidence            9999999999999999999999999888874

>KOG0640|consensus

Probab=99.20  E-value=4.3e-11  Score=88.83  Aligned_cols=102  Identities=12%  Similarity=0.192  Sum_probs=74.4

Q ss_pred             ccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh-------------------------h
Q psy14043         90 LLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV-------------------------A  144 (205)
Q Consensus        90 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~-------------------------~  144 (205)
                      ..+||.++..+ .|...++++.|||....+++|+.|++++++|+.....+.+-.                         .
T Consensus       159 qa~hPvIRTlY-DH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdH  237 (430)
T KOG0640|consen  159 QARHPVIRTLY-DHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDH  237 (430)
T ss_pred             ccCCceEeehh-hccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCC
Confidence            34467665543 577789999999999999999999999999987544322211                         0


Q ss_pred             --------hhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        145 --------AANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       145 --------~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                              +.-.++.....-.+|++.|++|.+|+.|+..+++|.||.|++||=..+
T Consensus       238 p~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~  293 (430)
T KOG0640|consen  238 PTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSN  293 (430)
T ss_pred             CceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccH
Confidence                    000111122245789999999999999999999999999999996544

>KOG0296|consensus

Probab=99.20  E-value=7.8e-11  Score=88.87  Aligned_cols=79  Identities=23%  Similarity=0.406  Sum_probs=73.4

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .|...+.+++.+|+.+++++|+.|..-.+|++.++.              ....+.||.+.|+++.||.||.+||||+-+
T Consensus        62 ~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge--------------~~~eltgHKDSVt~~~FshdgtlLATGdms  127 (399)
T KOG0296|consen   62 KHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE--------------FAGELTGHKDSVTCCSFSHDGTLLATGDMS  127 (399)
T ss_pred             hcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc--------------ceeEecCCCCceEEEEEccCceEEEecCCC
Confidence            567789999999999999999999999999999987              667889999999999999999999999999


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      |.|+||++.++..
T Consensus       128 G~v~v~~~stg~~  140 (399)
T KOG0296|consen  128 GKVLVFKVSTGGE  140 (399)
T ss_pred             ccEEEEEcccCce
Confidence            9999999988753

>KOG0645|consensus

Probab=99.18  E-value=9.4e-11  Score=85.36  Aligned_cols=80  Identities=23%  Similarity=0.364  Sum_probs=72.1

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      .-.|...+.+++|+.+|++||+++.|+.+=+|.++.....           +...-+.+|+..|..+.|+|....|+|+|
T Consensus       101 lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEf-----------ec~aVL~~HtqDVK~V~WHPt~dlL~S~S  169 (312)
T KOG0645|consen  101 LEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEF-----------ECIAVLQEHTQDVKHVIWHPTEDLLFSCS  169 (312)
T ss_pred             eeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcE-----------EEEeeeccccccccEEEEcCCcceeEEec
Confidence            3477888999999999999999999999999999976532           36678899999999999999999999999


Q ss_pred             CCCcEEEEeec
Q psy14043        180 ETGLIIVWMLY  190 (205)
Q Consensus       180 ~d~~i~~wd~~  190 (205)
                      +|.+|++|+-.
T Consensus       170 YDnTIk~~~~~  180 (312)
T KOG0645|consen  170 YDNTIKVYRDE  180 (312)
T ss_pred             cCCeEEEEeec
Confidence            99999999876

>KOG0641|consensus

Probab=99.18  E-value=1.3e-10  Score=82.89  Aligned_cols=92  Identities=15%  Similarity=0.259  Sum_probs=71.2

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcc-hhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKEST-GQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ......++.++|+|.|...|.|+..+++++..+....+.. +......+...+.++-+.|.+.|.|++|||+|+.||+||
T Consensus        29 l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgs  108 (350)
T KOG0641|consen   29 LEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGS  108 (350)
T ss_pred             ecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecC
Confidence            3455678999999999999999999999999876543221 111111222346677889999999999999999999999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      +|++|++..+...
T Consensus       109 ndk~ik~l~fn~d  121 (350)
T KOG0641|consen  109 NDKTIKVLPFNAD  121 (350)
T ss_pred             CCceEEEEecccc
Confidence            9999999866543

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.17  E-value=6e-11  Score=62.55  Aligned_cols=37  Identities=30%  Similarity=0.585  Sum_probs=34.9

Q ss_pred             eceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEe
Q psy14043        152 MNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWM  188 (205)
Q Consensus       152 ~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd  188 (205)
                      ...++.+|.+.|++++|+|++.+|+||+.|++|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4578899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG0264|consensus

Probab=99.17  E-value=1.1e-10  Score=90.13  Aligned_cols=80  Identities=23%  Similarity=0.383  Sum_probs=68.7

Q ss_pred             CCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~~  179 (205)
                      .|...++|++|+|-+ ..+|+||.|++|++||++....             ...++.+|...|..|.|||.. ..|||++
T Consensus       270 ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~-------------~lh~~e~H~dev~~V~WSPh~etvLASSg  336 (422)
T KOG0264|consen  270 AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK-------------PLHTFEGHEDEVFQVEWSPHNETVLASSG  336 (422)
T ss_pred             ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc-------------CceeccCCCcceEEEEeCCCCCceeEecc
Confidence            456679999999976 6789999999999999998763             347899999999999999955 5699999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|+.+.|||+.+--.
T Consensus       337 ~D~rl~vWDls~ig~  351 (422)
T KOG0264|consen  337 TDRRLNVWDLSRIGE  351 (422)
T ss_pred             cCCcEEEEecccccc
Confidence            999999999987443

>PTZ00420 coronin; Provisional

Probab=99.17  E-value=1.1e-10  Score=96.00  Aligned_cols=79  Identities=13%  Similarity=0.245  Sum_probs=65.8

Q ss_pred             cCCCccccccccccCCCe-eeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~-lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...+.+++|+|++.. +++++.|+.+++||+.++.              ....+. |...|.+++|+|+|..|++++
T Consensus       122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--------------~~~~i~-~~~~V~SlswspdG~lLat~s  186 (568)
T PTZ00420        122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--------------RAFQIN-MPKKLSSLKWNIKGNLLSGTC  186 (568)
T ss_pred             ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--------------EEEEEe-cCCcEEEEEECCCCCEEEEEe
Confidence            346678999999999875 5789999999999998775              223343 557899999999999999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|++|+|||+.++..
T Consensus       187 ~D~~IrIwD~Rsg~~  201 (568)
T PTZ00420        187 VGKHMHIIDPRKQEI  201 (568)
T ss_pred             cCCEEEEEECCCCcE
Confidence            999999999988653

>KOG0310|consensus

Probab=99.17  E-value=7.5e-11  Score=91.80  Aligned_cols=81  Identities=17%  Similarity=0.244  Sum_probs=70.2

Q ss_pred             cccCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC-CCEEE
Q psy14043         99 IAIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLT  176 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~-~~~la  176 (205)
                      ....|..+++...|+|+. ..+++|+.|+.+++||+++..              ....+.||++-|.|.+|+|- +..++
T Consensus       105 ~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~--------------v~~~l~~htDYVR~g~~~~~~~hivv  170 (487)
T KOG0310|consen  105 QLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY--------------VQAELSGHTDYVRCGDISPANDHIVV  170 (487)
T ss_pred             HHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE--------------EEEEecCCcceeEeeccccCCCeEEE
Confidence            345678889999999876 678889999999999999886              44578999999999999994 56899


Q ss_pred             eecCCCcEEEEeecCCC
Q psy14043        177 SSDETGLIIVWMLYKEK  193 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~  193 (205)
                      |||+||+|++||+....
T Consensus       171 tGsYDg~vrl~DtR~~~  187 (487)
T KOG0310|consen  171 TGSYDGKVRLWDTRSLT  187 (487)
T ss_pred             ecCCCceEEEEEeccCC
Confidence            99999999999998863

>KOG0269|consensus

Probab=99.16  E-value=6.2e-11  Score=96.93  Aligned_cols=78  Identities=18%  Similarity=0.374  Sum_probs=67.6

Q ss_pred             CCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        103 NNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       103 ~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      ....++.+.|+|. +..++++...|.+++||++....             ....+..|++.|.|+.|+|++.+|||||.|
T Consensus       175 nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r-------------~~~k~~AH~GpV~c~nwhPnr~~lATGGRD  241 (839)
T KOG0269|consen  175 NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR-------------CEKKLTAHNGPVLCLNWHPNREWLATGGRD  241 (839)
T ss_pred             cchhhhceeeccCCCceEEEecCCceEEEeeccCchh-------------HHHHhhcccCceEEEeecCCCceeeecCCC
Confidence            4456888999985 57889999999999999987652             456789999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      |+|+|||+..++
T Consensus       242 K~vkiWd~t~~~  253 (839)
T KOG0269|consen  242 KMVKIWDMTDSR  253 (839)
T ss_pred             ccEEEEeccCCC
Confidence            999999998643

>KOG0276|consensus

Probab=99.16  E-value=4.5e-11  Score=95.85  Aligned_cols=78  Identities=24%  Similarity=0.455  Sum_probs=69.6

Q ss_pred             CCCccccccccccC--CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~--~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      .|...++|+.+-+.  ..++.+|+.|.++++||+.+..              +.++|+||+..|..++|+|.-..++|||
T Consensus       181 gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~--------------CV~TLeGHt~Nvs~v~fhp~lpiiisgs  246 (794)
T KOG0276|consen  181 GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS--------------CVQTLEGHTNNVSFVFFHPELPIIISGS  246 (794)
T ss_pred             ccccCcceEEeccCCCcceEEecCCCceEEEeecchHH--------------HHHHhhcccccceEEEecCCCcEEEEec
Confidence            56677889987654  4799999999999999999987              7899999999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .||++|||+..+-+
T Consensus       247 EDGTvriWhs~Ty~  260 (794)
T KOG0276|consen  247 EDGTVRIWNSKTYK  260 (794)
T ss_pred             CCccEEEecCccee
Confidence            99999999876643

>KOG0643|consensus

Probab=99.15  E-value=1.9e-10  Score=83.73  Aligned_cols=80  Identities=13%  Similarity=0.153  Sum_probs=73.9

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|..++..+.++.+|..+.+++.|.+..+|-...+.              ...+..||++.|++++..-+.+.|.||+.
T Consensus         7 ~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe--------------rlGty~GHtGavW~~Did~~s~~liTGSA   72 (327)
T KOG0643|consen    7 QGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE--------------RLGTYDGHTGAVWCCDIDWDSKHLITGSA   72 (327)
T ss_pred             ccCccccceEEecCCCcEEEEecCCCCceEEEecCCc--------------eeeeecCCCceEEEEEecCCcceeeeccc
Confidence            4577788999999999999999999999999997776              66889999999999999999999999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |.++++||+.+|+.
T Consensus        73 D~t~kLWDv~tGk~   86 (327)
T KOG0643|consen   73 DQTAKLWDVETGKQ   86 (327)
T ss_pred             cceeEEEEcCCCcE
Confidence            99999999999874

>KOG0281|consensus

Probab=99.15  E-value=2.9e-11  Score=90.93  Aligned_cols=69  Identities=23%  Similarity=0.455  Sum_probs=59.7

Q ss_pred             cCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        114 QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       114 ~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      ..++++.+|++|.+|++||+..+.              +.+.++||..-|.++.|.  .+.++||.+||+|+|||+..+.
T Consensus       368 Yr~rlvVSGSSDntIRlwdi~~G~--------------cLRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aal  431 (499)
T KOG0281|consen  368 YRDRLVVSGSSDNTIRLWDIECGA--------------CLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAAL  431 (499)
T ss_pred             ccCeEEEecCCCceEEEEeccccH--------------HHHHHhchHHhhhheeec--CceeeeccccceEEEEeccccc
Confidence            456788889999999999998887              778899999999999995  7789999999999999999887


Q ss_pred             CCCCc
Q psy14043        194 NPQDK  198 (205)
Q Consensus       194 ~~~~~  198 (205)
                      .|...
T Consensus       432 dpra~  436 (499)
T KOG0281|consen  432 DPRAP  436 (499)
T ss_pred             CCccc
Confidence            76443

>KOG0316|consensus

Probab=99.15  E-value=1.5e-10  Score=82.87  Aligned_cols=80  Identities=20%  Similarity=0.306  Sum_probs=73.9

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      +..|...+..++.+.|+..+++++.|+.+.+||+++++              ..+.+.||.+.|+++.|+.+...++|||
T Consensus        55 YsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk--------------v~Rr~rgH~aqVNtV~fNeesSVv~Sgs  120 (307)
T KOG0316|consen   55 YSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK--------------VDRRFRGHLAQVNTVRFNEESSVVASGS  120 (307)
T ss_pred             ecCCCceeeeccccccccccccCCCCceEEEEEcccCe--------------eeeecccccceeeEEEecCcceEEEecc
Confidence            45677788889999999999999999999999999998              7899999999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|.++++||-+...
T Consensus       121 fD~s~r~wDCRS~s  134 (307)
T KOG0316|consen  121 FDSSVRLWDCRSRS  134 (307)
T ss_pred             ccceeEEEEcccCC
Confidence            99999999987754

>KOG0772|consensus

Probab=99.14  E-value=6.2e-11  Score=93.15  Aligned_cols=84  Identities=20%  Similarity=0.277  Sum_probs=67.8

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee--eEEEEEEcCCCCEEEeecCCC
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG--KVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~--~v~~~~~s~~~~~las~~~d~  182 (205)
                      ..+...+|++++.++|+|..||.|++|+..+.....           ...--..|..  .|+|++||+||++|+|-|.|+
T Consensus       318 v~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p-----------~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~  386 (641)
T KOG0772|consen  318 VPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRP-----------VMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD  386 (641)
T ss_pred             cCceeeecCCCcchhhhcccCCceeeeecCCccccc-----------ceEeeeccCCCCceeEEEeccccchhhhccCCC
Confidence            356677899999999999999999999986543211           1122356877  899999999999999999999


Q ss_pred             cEEEEeecCCCCCCCcC
Q psy14043        183 LIIVWMLYKEKNPQDKL  199 (205)
Q Consensus       183 ~i~~wd~~~~~~~~~~~  199 (205)
                      ++++||+.+-+-+..+.
T Consensus       387 tLKvWDLrq~kkpL~~~  403 (641)
T KOG0772|consen  387 TLKVWDLRQFKKPLNVR  403 (641)
T ss_pred             ceeeeeccccccchhhh
Confidence            99999999877665443

>KOG1445|consensus

Probab=99.14  E-value=3.7e-11  Score=96.67  Aligned_cols=82  Identities=20%  Similarity=0.375  Sum_probs=72.6

Q ss_pred             ccCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        100 AIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ...|..++..+.|||-. ..+++++.|.+|++||+.+..              ....|.||++-|.+++|||||+.+||.
T Consensus       673 lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~--------------~~~~l~gHtdqIf~~AWSpdGr~~AtV  738 (1012)
T KOG1445|consen  673 LTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAK--------------LYSRLVGHTDQIFGIAWSPDGRRIATV  738 (1012)
T ss_pred             eecccceEEEEEecchhhhHhhhhhccceeeeeehhhhh--------------hhheeccCcCceeEEEECCCCcceeee
Confidence            34566678999999975 789999999999999999887              556889999999999999999999999


Q ss_pred             cCCCcEEEEeecCCCCC
Q psy14043        179 DETGLIIVWMLYKEKNP  195 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~~  195 (205)
                      +.||+|+|++..++..+
T Consensus       739 cKDg~~rVy~Prs~e~p  755 (1012)
T KOG1445|consen  739 CKDGTLRVYEPRSREQP  755 (1012)
T ss_pred             ecCceEEEeCCCCCCCc
Confidence            99999999998876654

>KOG0264|consensus

Probab=99.13  E-value=1.5e-10  Score=89.26  Aligned_cols=89  Identities=21%  Similarity=0.353  Sum_probs=73.1

Q ss_pred             ccCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEe
Q psy14043        100 AIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTS  177 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las  177 (205)
                      ...+...+..++|++.. ..+++.+.|+.+.|||.++. ...           ......+|++.|+|++|+| ++..|||
T Consensus       223 ~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~-----------~~~~~~ah~~~vn~~~fnp~~~~ilAT  290 (422)
T KOG0264|consen  223 FSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSK-----------PSHSVKAHSAEVNCVAFNPFNEFILAT  290 (422)
T ss_pred             eecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCC-----------CcccccccCCceeEEEeCCCCCceEEe
Confidence            44677788999999865 67899999999999999963 111           4456789999999999999 6677999


Q ss_pred             ecCCCcEEEEeecCCCCCCCcCC
Q psy14043        178 SDETGLIIVWMLYKEKNPQDKLP  200 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~~~~~~~  200 (205)
                      ||.|++|.+||+++=..+.++|+
T Consensus       291 ~S~D~tV~LwDlRnL~~~lh~~e  313 (422)
T KOG0264|consen  291 GSADKTVALWDLRNLNKPLHTFE  313 (422)
T ss_pred             ccCCCcEEEeechhcccCceecc
Confidence            99999999999998766666654

>KOG2041|consensus

Probab=99.12  E-value=7.5e-11  Score=96.18  Aligned_cols=102  Identities=51%  Similarity=0.884  Sum_probs=88.9

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchh-hhhhcccceeceecccceeeEEEEEEcCCCCEEE
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQ-VAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT  176 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~la  176 (205)
                      ++..|.+.+.+|+.|+....++|.|+.||.+++..+.+....... ..++++++++++++.||++.|.-+.|+...|.|.
T Consensus         8 ki~iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLT   87 (1189)
T KOG2041|consen    8 KIGIPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLT   87 (1189)
T ss_pred             ccCCCCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccccc
Confidence            456788889999999999999999999999999999876532222 2568899999999999999999999999999999


Q ss_pred             eecCCCcEEEEeecCCCCCCCcC
Q psy14043        177 SSDETGLIIVWMLYKEKNPQDKL  199 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~~~~~~~  199 (205)
                      |.+.+|-|.||-+.+|.|-.++.
T Consensus        88 tSDt~GlIiVWmlykgsW~EEMi  110 (1189)
T KOG2041|consen   88 TSDTSGLIIVWMLYKGSWCEEMI  110 (1189)
T ss_pred             ccCCCceEEEEeeecccHHHHHh
Confidence            99999999999999999865443

>KOG0647|consensus

Probab=99.11  E-value=2.1e-10  Score=84.76  Aligned_cols=84  Identities=15%  Similarity=0.281  Sum_probs=71.3

Q ss_pred             hhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC--
Q psy14043         95 WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY--  172 (205)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~--  172 (205)
                      +..+....+..++-++.|+-+|..+++|+.|+.+++||+.+++               ......|.++|.++.|-+..  
T Consensus        63 ~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q---------------~~~v~~Hd~pvkt~~wv~~~~~  127 (347)
T KOG0647|consen   63 LVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ---------------VSQVAAHDAPVKTCHWVPGMNY  127 (347)
T ss_pred             ccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC---------------eeeeeecccceeEEEEecCCCc
Confidence            3334555677889999999999999999999999999999985               25667899999999997644  


Q ss_pred             CEEEeecCCCcEEEEeecCCC
Q psy14043        173 EKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~~~~~  193 (205)
                      +.|+|||+|++||.||++...
T Consensus       128 ~cl~TGSWDKTlKfWD~R~~~  148 (347)
T KOG0647|consen  128 QCLVTGSWDKTLKFWDTRSSN  148 (347)
T ss_pred             ceeEecccccceeecccCCCC
Confidence            479999999999999998653

>KOG0292|consensus

Probab=99.11  E-value=2.1e-10  Score=95.36  Aligned_cols=79  Identities=25%  Similarity=0.401  Sum_probs=74.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|..+++.+.|||++..+.+|+.|-.|++|++.+..              +..++.||-+-|..+.|++.--.+.|+|.
T Consensus        48 deHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr--------------clftL~GHlDYVRt~~FHheyPWIlSASD  113 (1202)
T KOG0292|consen   48 DEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR--------------CLFTLLGHLDYVRTVFFHHEYPWILSASD  113 (1202)
T ss_pred             hccCCccceeeecCCCCeEEecCCccEEEEEecccce--------------ehhhhccccceeEEeeccCCCceEEEccC
Confidence            4678899999999999999999999999999999887              78899999999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |.||+|||..+++
T Consensus       114 DQTIrIWNwqsr~  126 (1202)
T KOG0292|consen  114 DQTIRIWNWQSRK  126 (1202)
T ss_pred             CCeEEEEeccCCc
Confidence            9999999998875

>KOG0302|consensus

Probab=99.10  E-value=2.7e-10  Score=86.42  Aligned_cols=82  Identities=27%  Similarity=0.525  Sum_probs=69.5

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeecC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~~  180 (205)
                      .++.-++.+.|+.+-.++|+|+.||+++|||++......           ...+++-|..+|+++.|+| +...++.+|.
T Consensus       300 Ah~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~-----------pVA~fk~Hk~pItsieW~p~e~s~iaasg~  368 (440)
T KOG0302|consen  300 AHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQ-----------PVATFKYHKAPITSIEWHPHEDSVIAASGE  368 (440)
T ss_pred             ccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCC-----------cceeEEeccCCeeEEEeccccCceEEeccC
Confidence            455678899999988899999999999999998765321           3468899999999999998 5567999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |.+|.+||+...+.
T Consensus       369 D~QitiWDlsvE~D  382 (440)
T KOG0302|consen  369 DNQITIWDLSVEAD  382 (440)
T ss_pred             CCcEEEEEeeccCC
Confidence            99999999987654

>KOG0642|consensus

Probab=99.09  E-value=2.3e-10  Score=90.69  Aligned_cols=99  Identities=24%  Similarity=0.409  Sum_probs=82.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..+...++.++|++....+++++.|+.+++|++.....+      ....+....+|.+|.++|.|++.++.++.+.||+.
T Consensus       291 ~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s------~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~  364 (577)
T KOG0642|consen  291 RSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS------AEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGI  364 (577)
T ss_pred             ecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCc------cccceeeeEEEecccCceEEEEecCCceEEEeecc
Confidence            345556788889999999999999999999999442211      12233456789999999999999999999999999


Q ss_pred             CCcEEEEeecCCCCCCCcCCCCcCC
Q psy14043        181 TGLIIVWMLYKEKNPQDKLPPLMLT  205 (205)
Q Consensus       181 d~~i~~wd~~~~~~~~~~~~~~~~~  205 (205)
                      ||+|+.|++.....+-+..-|.+|+
T Consensus       365 Dg~I~~w~~p~n~dp~ds~dp~vl~  389 (577)
T KOG0642|consen  365 DGTIRCWNLPPNQDPDDSYDPSVLS  389 (577)
T ss_pred             CceeeeeccCCCCCcccccCcchhc
Confidence            9999999999878888888888874

>KOG0603|consensus

Probab=99.08  E-value=5.3e-11  Score=96.12  Aligned_cols=92  Identities=34%  Similarity=0.522  Sum_probs=80.3

Q ss_pred             CCCeEEEEecCCCC-----------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC
Q psy14043          2 NGAVLKLIDLGSSA-----------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP   58 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~   58 (205)
                      .+|++|+.|||++.                       ...+|+||+|++.|||++|..||.+    ++...|...++.+|
T Consensus       132 ~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p  207 (612)
T KOG0603|consen  132 LEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMP  207 (612)
T ss_pred             ccCccccCCchhhhHhHhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCc
Confidence            47999999999992                       7889999999999999999999977    78888888888888


Q ss_pred             CCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhccc
Q psy14043         59 PEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIAI  101 (205)
Q Consensus        59 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~~  101 (205)
                      .    .++..+++++..++.++|.+|...     .++++|+++..+.+
T Consensus       208 ~----~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~  251 (612)
T KOG0603|consen  208 R----ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW  251 (612)
T ss_pred             h----hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence            7    589999999999999999999644     57889999865543

>KOG4283|consensus

Probab=99.08  E-value=3.2e-10  Score=83.70  Aligned_cols=73  Identities=26%  Similarity=0.436  Sum_probs=62.7

Q ss_pred             cccccccccCC---CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCE-EEeecCC
Q psy14043        106 KVNCLAWHQNQ---GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSDET  181 (205)
Q Consensus       106 ~~~~~~~~~~~---~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~-las~~~d  181 (205)
                      .+...+++|-.   -.+|+|..+-.+++.|+.++.              ...+|.||++.|.+|.|||...+ |||||.|
T Consensus       145 ~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs--------------~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaD  210 (397)
T KOG4283|consen  145 KVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS--------------FSHTLSGHRDGVLAVEWSPSSEWVLATGSAD  210 (397)
T ss_pred             eeehhhcChhhhcceEEEEecCCCcEEEEeccCCc--------------ceeeeccccCceEEEEeccCceeEEEecCCC
Confidence            34455566643   368899999999999999997              77899999999999999997666 9999999


Q ss_pred             CcEEEEeecCC
Q psy14043        182 GLIIVWMLYKE  192 (205)
Q Consensus       182 ~~i~~wd~~~~  192 (205)
                      |.|++||++..
T Consensus       211 g~irlWDiRra  221 (397)
T KOG4283|consen  211 GAIRLWDIRRA  221 (397)
T ss_pred             ceEEEEEeecc
Confidence            99999999886

>KOG0277|consensus

Probab=99.08  E-value=3.9e-10  Score=81.62  Aligned_cols=77  Identities=14%  Similarity=0.285  Sum_probs=66.6

Q ss_pred             CCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~  179 (205)
                      .|..++.++.|++.. +.+.++|-|++||+|+.+..+              ..+++.||+..|...+||| .+..++|+|
T Consensus       102 EH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~--------------Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S  167 (311)
T KOG0277|consen  102 EHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN--------------SVQTFNGHNSCIYQAAFSPHIPNLFASAS  167 (311)
T ss_pred             hhhhheEEeccccccceeEEeeccCCceEeecCCCCc--------------ceEeecCCccEEEEEecCCCCCCeEEEcc
Confidence            456678888888754 566777999999999999887              5689999999999999999 778999999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      .|+++++||++..
T Consensus       168 gd~~l~lwdvr~~  180 (311)
T KOG0277|consen  168 GDGTLRLWDVRSP  180 (311)
T ss_pred             CCceEEEEEecCC
Confidence            9999999998663

>KOG0639|consensus

Probab=99.07  E-value=1.5e-10  Score=90.97  Aligned_cols=84  Identities=18%  Similarity=0.222  Sum_probs=73.8

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      ....+..++.+||.+...++..||.|.+||+....              +.+.|.||++.+.|+..|+||..|=||+-|+
T Consensus       508 sapaCyALa~spDakvcFsccsdGnI~vwDLhnq~--------------~VrqfqGhtDGascIdis~dGtklWTGGlDn  573 (705)
T KOG0639|consen  508 SAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT--------------LVRQFQGHTDGASCIDISKDGTKLWTGGLDN  573 (705)
T ss_pred             cchhhhhhhcCCccceeeeeccCCcEEEEEcccce--------------eeecccCCCCCceeEEecCCCceeecCCCcc
Confidence            33456778899999999999999999999999876              7899999999999999999999999999999


Q ss_pred             cEEEEeecCCCC-CCCcCC
Q psy14043        183 LIIVWMLYKEKN-PQDKLP  200 (205)
Q Consensus       183 ~i~~wd~~~~~~-~~~~~~  200 (205)
                      +||.||++.+.. .++.|-
T Consensus       574 tvRcWDlregrqlqqhdF~  592 (705)
T KOG0639|consen  574 TVRCWDLREGRQLQQHDFS  592 (705)
T ss_pred             ceeehhhhhhhhhhhhhhh
Confidence            999999999764 344443

>KOG0306|consensus

Probab=99.07  E-value=2.3e-10  Score=93.49  Aligned_cols=117  Identities=20%  Similarity=0.199  Sum_probs=92.0

Q ss_pred             hcccCcCCCCCcccccccc---hhh------hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh---
Q psy14043         76 LLNTHADKRPTAGQLLQVA---WFA------EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV---  143 (205)
Q Consensus        76 ~l~~~p~~R~~~~~~l~~~---~~~------~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~---  143 (205)
                      |+...|+.|+-+..++...   |+.      -....|..++.|+..+|+++.+++||.|+.+++|-++-+..+....   
T Consensus       513 ~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHd  592 (888)
T KOG0306|consen  513 CVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHD  592 (888)
T ss_pred             EEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhccc
Confidence            5678888888777766542   221      2245899999999999999999999999999999998665422211   


Q ss_pred             -------------------------hhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        144 -------------------------AAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       144 -------------------------~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                                               .+.--.+...+++.||...|+|++.+|+|.+++|+|.|.+|++|.....
T Consensus       593 DSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde  666 (888)
T KOG0306|consen  593 DSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDE  666 (888)
T ss_pred             CceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCc
Confidence                                     2222344567799999999999999999999999999999999976654

>KOG0305|consensus

Probab=99.07  E-value=3.3e-10  Score=90.46  Aligned_cols=83  Identities=18%  Similarity=0.298  Sum_probs=71.8

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEee
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS  178 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~  178 (205)
                      ...|...+..+.|++++.++|+|+.|+.+.|||.....              ...++.+|.++|.+++|+| ..-.||+|
T Consensus       297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~--------------p~~~~~~H~aAVKA~awcP~q~~lLAsG  362 (484)
T KOG0305|consen  297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE--------------PKFTFTEHTAAVKALAWCPWQSGLLATG  362 (484)
T ss_pred             hhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc--------------ccEEEeccceeeeEeeeCCCccCceEEc
Confidence            44577788889999999999999999999999995554              4578899999999999999 66689998


Q ss_pred             c--CCCcEEEEeecCCCCCC
Q psy14043        179 D--ETGLIIVWMLYKEKNPQ  196 (205)
Q Consensus       179 ~--~d~~i~~wd~~~~~~~~  196 (205)
                      +  .|++|+.||+.+++..+
T Consensus       363 GGs~D~~i~fwn~~~g~~i~  382 (484)
T KOG0305|consen  363 GGSADRCIKFWNTNTGARID  382 (484)
T ss_pred             CCCcccEEEEEEcCCCcEec
Confidence            6  59999999999887644

>KOG0318|consensus

Probab=99.06  E-value=5.9e-10  Score=87.83  Aligned_cols=80  Identities=10%  Similarity=0.286  Sum_probs=68.9

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...+..++.+++++|++.++|++...+.+-+|+.++...+             .....=|+++|.+++|||+.+.+||||
T Consensus       483 ~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~-------------~~~w~FHtakI~~~aWsP~n~~vATGS  549 (603)
T KOG0318|consen  483 LLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVK-------------TNRWAFHTAKINCVAWSPNNKLVATGS  549 (603)
T ss_pred             eecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCcee-------------cceeeeeeeeEEEEEeCCCceEEEecc
Confidence            3467778999999999999999999999999999987621             122233999999999999999999999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      -|..|.||++.+.
T Consensus       550 lDt~Viiysv~kP  562 (603)
T KOG0318|consen  550 LDTNVIIYSVKKP  562 (603)
T ss_pred             ccceEEEEEccCh
Confidence            9999999998763

>KOG2096|consensus

Probab=99.05  E-value=4.5e-10  Score=83.77  Aligned_cols=45  Identities=9%  Similarity=0.101  Sum_probs=40.9

Q ss_pred             cccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecC
Q psy14043         91 LQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT  135 (205)
Q Consensus        91 l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~  135 (205)
                      ..|||.......|...+.+++|+.+|+.+|+.+.|++|++|+++.
T Consensus        73 f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~D  117 (420)
T KOG2096|consen   73 FVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRD  117 (420)
T ss_pred             cccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecch
Confidence            457888888889999999999999999999999999999999864

>KOG2445|consensus

Probab=99.05  E-value=8.4e-10  Score=81.83  Aligned_cols=82  Identities=11%  Similarity=0.230  Sum_probs=68.7

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC--CCCEE
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QYEKL  175 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~--~~~~l  175 (205)
                      .+...|..-++++.|.+.|+++|+++.|+.+++||.+...          ++.+....-+.|.+.|..+.|.+  -|+.+
T Consensus         7 pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s----------~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvv   76 (361)
T KOG2445|consen    7 PIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDS----------GTWSCTSSWRAHDGSIWRVVWAHPEFGQVV   76 (361)
T ss_pred             ccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCC----------CceEEeeeEEecCCcEEEEEecCccccceE
Confidence            3445667779999999999999999999999999975443          23445556688999999999975  68999


Q ss_pred             EeecCCCcEEEEee
Q psy14043        176 TSSDETGLIIVWML  189 (205)
Q Consensus       176 as~~~d~~i~~wd~  189 (205)
                      |+||.|++++||.-
T Consensus        77 A~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   77 ATCSYDRTVSIWEE   90 (361)
T ss_pred             EEEecCCceeeeee
Confidence            99999999999975

>KOG0590|consensus

Probab=99.04  E-value=2.2e-11  Score=101.19  Aligned_cols=99  Identities=22%  Similarity=0.417  Sum_probs=76.1

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .+|.+||+|||.+-                                  ...+||||.|++++.|.+|+.||......+..
T Consensus       455 ~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~  534 (601)
T KOG0590|consen  455 ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNS  534 (601)
T ss_pred             cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccc
Confidence            46799999999981                                  66799999999999999999999755443321


Q ss_pred             --HHHHh---CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 --AHISV---ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 --~~i~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                        +....   ....-+...+..++.+.+.+|.++|+.+|.+|+++.++++.+|++.+.
T Consensus       535 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  535 FKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence              11111   111222233446889999999999999999999999999999998764

>KOG0283|consensus

Probab=99.04  E-value=4.1e-10  Score=92.71  Aligned_cols=94  Identities=16%  Similarity=0.361  Sum_probs=69.3

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCC------Cc--------------------c----hh---h-
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK------ES--------------------T----GQ---V-  143 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~------~~--------------------~----~~---~-  143 (205)
                      .+...|...+-+..|+++|++||+||.|+.|+||.+-...      ..                    .    +.   . 
T Consensus       261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~  340 (712)
T KOG0283|consen  261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR  340 (712)
T ss_pred             ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence            3334778889999999999999999999999999986610      00                    0    00   0 


Q ss_pred             -hhhcc-------cc----eeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        144 -AAANV-------NL----AMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       144 -~~~~~-------~~----~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                       .....       .+    .....+.||++.|..+.||.+ ++|.|+|-|+|||+|++...
T Consensus       341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~  400 (712)
T KOG0283|consen  341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK  400 (712)
T ss_pred             cccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc
Confidence             00000       11    234468999999999999974 58899999999999998753

>KOG0308|consensus

Probab=99.04  E-value=6e-10  Score=89.76  Aligned_cols=78  Identities=27%  Similarity=0.405  Sum_probs=70.0

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      ++...+.+++.++.+..+++|+..+.+++||..+..              -...+.||+..|..+-.++||..+.|+|.|
T Consensus       169 G~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~--------------kimkLrGHTdNVr~ll~~dDGt~~ls~sSD  234 (735)
T KOG0308|consen  169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCK--------------KIMKLRGHTDNVRVLLVNDDGTRLLSASSD  234 (735)
T ss_pred             CCccceeeeecCCcceEEEecCcccceEEecccccc--------------ceeeeeccccceEEEEEcCCCCeEeecCCC
Confidence            455678889999999999999999999999999887              345778999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      |+|++||+...+
T Consensus       235 gtIrlWdLgqQr  246 (735)
T KOG0308|consen  235 GTIRLWDLGQQR  246 (735)
T ss_pred             ceEEeeeccccc
Confidence            999999997654

>KOG1009|consensus

Probab=99.02  E-value=7.3e-10  Score=84.74  Aligned_cols=95  Identities=16%  Similarity=0.287  Sum_probs=75.7

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCC--cchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE--STGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      ...|...++++.|+|+|..+|+|+.+|.+.+|.......  .++.....+.....-+.+.+|...|..++|+||+.++++
T Consensus        61 Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s  140 (434)
T KOG1009|consen   61 LSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVS  140 (434)
T ss_pred             ccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeee
Confidence            345677899999999999999999999999999873221  111111112223456788999999999999999999999


Q ss_pred             ecCCCcEEEEeecCCCC
Q psy14043        178 SDETGLIIVWMLYKEKN  194 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~  194 (205)
                      ++-|.++++||+..|..
T Consensus       141 ~s~dns~~l~Dv~~G~l  157 (434)
T KOG1009|consen  141 GSVDNSVRLWDVHAGQL  157 (434)
T ss_pred             eeccceEEEEEecccee
Confidence            99999999999999864

>KOG0267|consensus

Probab=99.02  E-value=3.8e-10  Score=91.90  Aligned_cols=106  Identities=15%  Similarity=0.182  Sum_probs=83.7

Q ss_pred             HHhcccCcCCCCC----------cccccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh
Q psy14043         74 GQLLNTHADKRPT----------AGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV  143 (205)
Q Consensus        74 ~~~l~~~p~~R~~----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~  143 (205)
                      -+++..++.+|.-          ++|+-+..-++ ....+...+..+.|+|.+.+.|+|+.|+-+++||.....      
T Consensus        73 IeSl~f~~~E~LlaagsasgtiK~wDleeAk~vr-tLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G------  145 (825)
T KOG0267|consen   73 IESLTFDTSERLLAAGSASGTIKVWDLEEAKIVR-TLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG------  145 (825)
T ss_pred             ceeeecCcchhhhcccccCCceeeeehhhhhhhh-hhhccccCcceeeeccceEEeccccccccceehhhhccC------
Confidence            3455556555532          33444333333 345677778888899999999999999999999998655      


Q ss_pred             hhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        144 AAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       144 ~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                              +..++.+|.+.|..+.|+|+|+++++++.|.+++|||...|+.
T Consensus       146 --------c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~  188 (825)
T KOG0267|consen  146 --------CSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKL  188 (825)
T ss_pred             --------ceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccc
Confidence                    5678889999999999999999999999999999999977654

>KOG0265|consensus

Probab=99.02  E-value=8.3e-10  Score=81.53  Aligned_cols=78  Identities=19%  Similarity=0.239  Sum_probs=69.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~~  179 (205)
                      ..|...+..+.|..+++.+.+++.|++++.||.++++              ..+.+++|++-|++++-+.-| +.+.|++
T Consensus        87 kgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~--------------~~rk~k~h~~~vNs~~p~rrg~~lv~Sgs  152 (338)
T KOG0265|consen   87 KGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGK--------------RIRKHKGHTSFVNSLDPSRRGPQLVCSGS  152 (338)
T ss_pred             ccccceeEeeeeccCCCEEEEecCCceEEEEecccce--------------eeehhccccceeeecCccccCCeEEEecC
Confidence            4677889999999999999999999999999999998              678899999999999966545 5588999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      .|+++++||+++.
T Consensus       153 dD~t~kl~D~R~k  165 (338)
T KOG0265|consen  153 DDGTLKLWDIRKK  165 (338)
T ss_pred             CCceEEEEeeccc
Confidence            9999999999854

>KOG0306|consensus

Probab=99.02  E-value=7.7e-10  Score=90.55  Aligned_cols=75  Identities=27%  Similarity=0.473  Sum_probs=69.4

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ..++|+.-+++..++|.|..||.|++|+..+..              ...++.||..+|+++.|...|..|||||.|+.|
T Consensus        66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~--------------~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~I  131 (888)
T KOG0306|consen   66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEE--------------ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDI  131 (888)
T ss_pred             ceEEEeeccCCcceEEEEecCceEEeeccCCCc--------------eeeeecccccceEEEEEcccCceEeecCCCccE
Confidence            478899999999999999999999999999775              678999999999999999999999999999999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      .|||+..+.
T Consensus       132 IvwDlV~E~  140 (888)
T KOG0306|consen  132 IVWDLVGEE  140 (888)
T ss_pred             EEEEeccce
Confidence            999997653

>KOG0286|consensus

Probab=99.02  E-value=1.1e-09  Score=80.72  Aligned_cols=79  Identities=16%  Similarity=0.303  Sum_probs=68.5

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~  179 (205)
                      ..|...+.+..|-. ...+.+++-|.+..+||++++.              ....|.||++.|-+++++| +++.++||+
T Consensus       142 ~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~--------------~~~~f~GH~gDV~slsl~p~~~ntFvSg~  206 (343)
T KOG0286|consen  142 AGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ--------------QTQVFHGHTGDVMSLSLSPSDGNTFVSGG  206 (343)
T ss_pred             cCccceeEEEEEcC-CCceEecCCCceEEEEEcccce--------------EEEEecCCcccEEEEecCCCCCCeEEecc
Confidence            34555567777777 4567889999999999999998              6688999999999999999 999999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      -|++.++||++.+.-
T Consensus       207 cD~~aklWD~R~~~c  221 (343)
T KOG0286|consen  207 CDKSAKLWDVRSGQC  221 (343)
T ss_pred             cccceeeeeccCcce
Confidence            999999999998753

>KOG2394|consensus

Probab=99.01  E-value=4.4e-10  Score=88.80  Aligned_cols=74  Identities=19%  Similarity=0.472  Sum_probs=63.9

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .++...|++||+++|+-+.||.+|++++++..              +...++---+...||+|||||+++++|+.|--|.
T Consensus       292 ~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~e--------------Llg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVt  357 (636)
T KOG2394|consen  292 SINEFAFSPDGKYLATVSQDGFLRIFDFDTQE--------------LLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVT  357 (636)
T ss_pred             cccceeEcCCCceEEEEecCceEEEeeccHHH--------------HHHHHHhhccceEEEEEcCCccEEEecCCcceEE
Confidence            57788899999999999999999999999875              3344444457789999999999999999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      ||.+..++
T Consensus       358 VwSf~erR  365 (636)
T KOG2394|consen  358 VWSFEERR  365 (636)
T ss_pred             EEEeccce
Confidence            99987764

>KOG0296|consensus

Probab=99.00  E-value=8e-10  Score=83.53  Aligned_cols=72  Identities=18%  Similarity=0.379  Sum_probs=66.6

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEE
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW  187 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~w  187 (205)
                      .=+.|||.+..++.|+.||.+=+|.+.+..              ..+.+.||+.++++=.|.|||++++++..||+|++|
T Consensus       152 eWl~WHp~a~illAG~~DGsvWmw~ip~~~--------------~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~W  217 (399)
T KOG0296|consen  152 EWLKWHPRAHILLAGSTDGSVWMWQIPSQA--------------LCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVW  217 (399)
T ss_pred             EEEEecccccEEEeecCCCcEEEEECCCcc--------------eeeEecCCCCCcccccccCCCceEEEEecCceEEEE
Confidence            345799999999999999999999999865              668999999999999999999999999999999999


Q ss_pred             eecCCC
Q psy14043        188 MLYKEK  193 (205)
Q Consensus       188 d~~~~~  193 (205)
                      |..+++
T Consensus       218 n~ktg~  223 (399)
T KOG0296|consen  218 NPKTGQ  223 (399)
T ss_pred             ecCCCc
Confidence            999985

>KOG0276|consensus

Probab=98.99  E-value=1.6e-09  Score=87.13  Aligned_cols=78  Identities=19%  Similarity=0.308  Sum_probs=70.7

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~  179 (205)
                      ..|...+++++.||...++.++|.|-++|+|+.+..=             .+.++++||+--|-+++|+| |...+||||
T Consensus        94 eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~w-------------a~~qtfeGH~HyVMqv~fnPkD~ntFaS~s  160 (794)
T KOG0276|consen   94 EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEW-------------ACEQTFEGHEHYVMQVAFNPKDPNTFASAS  160 (794)
T ss_pred             eccccceeeeeecCCCCeEEecCCccEEEEeeccCce-------------eeeeEEcCcceEEEEEEecCCCccceeeee
Confidence            3577789999999999999999999999999998653             36789999999999999999 888999999


Q ss_pred             CCCcEEEEeecC
Q psy14043        180 ETGLIIVWMLYK  191 (205)
Q Consensus       180 ~d~~i~~wd~~~  191 (205)
                      -|+||+||.+.+
T Consensus       161 LDrTVKVWslgs  172 (794)
T KOG0276|consen  161 LDRTVKVWSLGS  172 (794)
T ss_pred             ccccEEEEEcCC
Confidence            999999999865

>KOG0973|consensus

Probab=98.99  E-value=8.3e-10  Score=93.23  Aligned_cols=78  Identities=15%  Similarity=0.292  Sum_probs=72.2

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+..+.|+|++.++++++.|++|-+|+..+..              ....+.||.+.|..+.|-|-|+++||=+
T Consensus       125 l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~--------------~~~vl~~H~s~VKGvs~DP~Gky~ASqs  190 (942)
T KOG0973|consen  125 LRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE--------------LLKVLRGHQSLVKGVSWDPIGKYFASQS  190 (942)
T ss_pred             EecCCCccceeccCCCccEEEEecccceEEEEccccce--------------eeeeeecccccccceEECCccCeeeeec
Confidence            44677889999999999999999999999999999885              6789999999999999999999999999


Q ss_pred             CCCcEEEEeecC
Q psy14043        180 ETGLIIVWMLYK  191 (205)
Q Consensus       180 ~d~~i~~wd~~~  191 (205)
                      .|++|+||++.+
T Consensus       191 dDrtikvwrt~d  202 (942)
T KOG0973|consen  191 DDRTLKVWRTSD  202 (942)
T ss_pred             CCceEEEEEccc
Confidence            999999999655

>KOG0281|consensus

Probab=98.99  E-value=5.1e-10  Score=84.38  Aligned_cols=76  Identities=17%  Similarity=0.314  Sum_probs=65.5

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...++.+.|+.  +++.+++.|.++++|++.+..              ..+++.||...|-|+.+.  |++++|||
T Consensus       316 LvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~st~e--------------fvRtl~gHkRGIAClQYr--~rlvVSGS  377 (499)
T KOG0281|consen  316 LVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCE--------------FVRTLNGHKRGIACLQYR--DRLVVSGS  377 (499)
T ss_pred             Hhhhhhheeeecccc--ceEEEecCCceEEEEecccee--------------eehhhhcccccceehhcc--CeEEEecC
Confidence            345555666666654  599999999999999999987              889999999999999885  89999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|.+|++||+..|+
T Consensus       378 SDntIRlwdi~~G~  391 (499)
T KOG0281|consen  378 SDNTIRLWDIECGA  391 (499)
T ss_pred             CCceEEEEeccccH
Confidence            99999999999886

>KOG0322|consensus

Probab=98.98  E-value=9.8e-10  Score=79.97  Aligned_cols=71  Identities=23%  Similarity=0.309  Sum_probs=64.9

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .++.+.+.||++.+|+++.|+.++++...+.+              ....++-|++.|.+++|||+...+|++|.|++|.
T Consensus       253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~--------------pLAVLkyHsagvn~vAfspd~~lmAaaskD~rIS  318 (323)
T KOG0322|consen  253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLN--------------PLAVLKYHSAGVNAVAFSPDCELMAAASKDARIS  318 (323)
T ss_pred             CccceEEccCCcEEeecccCCcEEEEEeccCC--------------chhhhhhhhcceeEEEeCCCCchhhhccCCceEE
Confidence            46677889999999999999999999999987              5567889999999999999999999999999999


Q ss_pred             EEeec
Q psy14043        186 VWMLY  190 (205)
Q Consensus       186 ~wd~~  190 (205)
                      +|++.
T Consensus       319 LWkLY  323 (323)
T KOG0322|consen  319 LWKLY  323 (323)
T ss_pred             eeecC
Confidence            99863

>KOG0771|consensus

Probab=98.98  E-value=8.9e-10  Score=84.50  Aligned_cols=71  Identities=20%  Similarity=0.273  Sum_probs=64.1

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEE
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW  187 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~w  187 (205)
                      .+++|+.++..+|+|+.||++|+|+..+..              .......|.+.|.+++|||||++|+|.+.| ..+||
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~--------------t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW  212 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML--------------TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVW  212 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcch--------------hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEE
Confidence            678999999999999999999999977655              344567899999999999999999999999 99999


Q ss_pred             eecCCC
Q psy14043        188 MLYKEK  193 (205)
Q Consensus       188 d~~~~~  193 (205)
                      ++.++.
T Consensus       213 ~~~~g~  218 (398)
T KOG0771|consen  213 SVNTGA  218 (398)
T ss_pred             EeccCc
Confidence            999984

>KOG0282|consensus

Probab=98.98  E-value=7e-10  Score=86.48  Aligned_cols=67  Identities=19%  Similarity=0.377  Sum_probs=61.6

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeecCCCcEEE
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSDETGLIIV  186 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~~d~~i~~  186 (205)
                      ..+.|+|||+++++|..||.+.+||..+..              +..+++.|.+.+..+.|+| ....+||||+||.|++
T Consensus       436 ~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k--------------l~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Iki  501 (503)
T KOG0282|consen  436 CQVDFSPDGRTLCSGDSDGKVNFWDWKTTK--------------LVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKI  501 (503)
T ss_pred             eeEEEcCCCCeEEeecCCccEEEeechhhh--------------hhhccccCCcceEEEEecCCCcceeEecccCceeEe
Confidence            456799999999999999999999999987              7789999999999999999 4567999999999999


Q ss_pred             Ee
Q psy14043        187 WM  188 (205)
Q Consensus       187 wd  188 (205)
                      ||
T Consensus       502 wd  503 (503)
T KOG0282|consen  502 WD  503 (503)
T ss_pred             cC
Confidence            96

>KOG1446|consensus

Probab=98.97  E-value=3.7e-09  Score=78.49  Aligned_cols=91  Identities=20%  Similarity=0.277  Sum_probs=71.9

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchh------h-------------------hhhcccc-----ee
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQ------V-------------------AAANVNL-----AM  152 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~------~-------------------~~~~~~~-----~~  152 (205)
                      ....++++.|+.+|..+++++.|.+++++|..++.+....      +                   ....+.+     ..
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNky   92 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKY   92 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCce
Confidence            4567899999999999999999999999999877652111      1                   0111112     24


Q ss_pred             ceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        153 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       153 ~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      .+.|.||...|++++.||-+..+.|+|.|++|++||++..+
T Consensus        93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~  133 (311)
T KOG1446|consen   93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK  133 (311)
T ss_pred             EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC
Confidence            56789999999999999988999999999999999998544

>KOG0576|consensus

Probab=98.97  E-value=8.4e-10  Score=89.97  Aligned_cols=97  Identities=24%  Similarity=0.336  Sum_probs=81.8

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      +.|.+|++|||.+                                |++.+|+|++|+...|+-.-++|.......+.+..
T Consensus       147 d~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L  226 (829)
T KOG0576|consen  147 DEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL  226 (829)
T ss_pred             ccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH
Confidence            3588999999998                                59999999999999999998999877777777777


Q ss_pred             HHhCCCCCCC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         50 ISVADYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        50 i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+..+..|. .....+++.+-+|++.+|.++|.+||+++.+++|+|+..
T Consensus       227 mTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  227 MTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             hhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence            6665554443 334568999999999999999999999999999999853

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.97  E-value=3.1e-09  Score=79.51  Aligned_cols=78  Identities=29%  Similarity=0.518  Sum_probs=70.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .|...+.++.|+++++.+++++.++.+++|++.+..              ....+.+|...+..+.|+|+++.|++++.|
T Consensus         7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~   72 (289)
T cd00200           7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE--------------LLRTLKGHTGPVRDVAASADGTYLASGSSD   72 (289)
T ss_pred             ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC--------------cEEEEecCCcceeEEEECCCCCEEEEEcCC
Confidence            567789999999999999999999999999998775              446678899999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      +.|++||+.+++
T Consensus        73 ~~i~i~~~~~~~   84 (289)
T cd00200          73 KTIRLWDLETGE   84 (289)
T ss_pred             CeEEEEEcCccc
Confidence            999999998753

>KOG1407|consensus

Probab=98.97  E-value=8.4e-10  Score=80.15  Aligned_cols=86  Identities=19%  Similarity=0.331  Sum_probs=72.0

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEE
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLT  176 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~la  176 (205)
                      .....+..++..++|+-+|..+++|+.|+++++|+++....            ......+||++.|-.++|+| ....++
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~------------~~~~~~~gh~~svdql~w~~~~~d~~a   81 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRF------------RKELVYRGHTDSVDQLCWDPKHPDLFA   81 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhh------------hhhhcccCCCcchhhheeCCCCCcceE
Confidence            33445667899999999999999999999999999987641            12345689999999999997 667899


Q ss_pred             eecCCCcEEEEeecCCCCC
Q psy14043        177 SSDETGLIIVWMLYKEKNP  195 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~~~  195 (205)
                      +++.|++|++||+..++-.
T Consensus        82 tas~dk~ir~wd~r~~k~~  100 (313)
T KOG1407|consen   82 TASGDKTIRIWDIRSGKCT  100 (313)
T ss_pred             EecCCceEEEEEeccCcEE
Confidence            9999999999999988643

>KOG0313|consensus

Probab=98.96  E-value=2e-09  Score=81.87  Aligned_cols=95  Identities=19%  Similarity=0.272  Sum_probs=70.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCC-----cch--hh----hhhcccceeceecccceeeEEEEEEc
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE-----STG--QV----AAANVNLAMNQSLQGHSGKVRAIIWN  169 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~-----~~~--~~----~~~~~~~~~~~~~~gh~~~v~~~~~s  169 (205)
                      ..|...+.+++..+++..+++|+.|..+++|+..+...     ...  ..    ......=....++.||+++|.+|.|+
T Consensus       190 ~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~  269 (423)
T KOG0313|consen  190 RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWS  269 (423)
T ss_pred             cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEc
Confidence            36777889999999999999999999999999332211     000  00    00000112345789999999999999


Q ss_pred             CCCCEEEeecCCCcEEEEeecCCCCCC
Q psy14043        170 EQYEKLTSSDETGLIIVWMLYKEKNPQ  196 (205)
Q Consensus       170 ~~~~~las~~~d~~i~~wd~~~~~~~~  196 (205)
                      + ...+.|+|+|-+|++||+.++....
T Consensus       270 d-~~v~yS~SwDHTIk~WDletg~~~~  295 (423)
T KOG0313|consen  270 D-ATVIYSVSWDHTIKVWDLETGGLKS  295 (423)
T ss_pred             C-CCceEeecccceEEEEEeeccccee
Confidence            8 6678999999999999999987543

>KOG0303|consensus

Probab=98.95  E-value=1.5e-09  Score=82.93  Aligned_cols=79  Identities=16%  Similarity=0.262  Sum_probs=69.6

Q ss_pred             cCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...+-.++|||.- +.+++++.|.++.+|++.++.              ...++. |-+-|++++||.||.+|++.+
T Consensus       128 ~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tge--------------ali~l~-hpd~i~S~sfn~dGs~l~Ttc  192 (472)
T KOG0303|consen  128 YGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGE--------------ALITLD-HPDMVYSMSFNRDGSLLCTTC  192 (472)
T ss_pred             eecceeEEEEeecccchhhHhhccCCceEEEEeccCCc--------------eeeecC-CCCeEEEEEeccCCceeeeec
Confidence            4667778889999975 788999999999999999997              334555 999999999999999999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|+.|||||.+++..
T Consensus       193 kDKkvRv~dpr~~~~  207 (472)
T KOG0303|consen  193 KDKKVRVIDPRRGTV  207 (472)
T ss_pred             ccceeEEEcCCCCcE
Confidence            999999999998864

>KOG0646|consensus

Probab=98.95  E-value=2.6e-09  Score=83.05  Aligned_cols=75  Identities=19%  Similarity=0.346  Sum_probs=69.6

Q ss_pred             CccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCc
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL  183 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~  183 (205)
                      ..++.+++-++.|.+++.|+..+.+.+|.+.++.              +...+.+|...|+++.|+-||..|+|||.||.
T Consensus        81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~--------------LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~  146 (476)
T KOG0646|consen   81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGI--------------LLNVLSAHYQSITCLKFSDDGSHIITGSKDGA  146 (476)
T ss_pred             ccceeeeecCCCceEEEeecccCcEEEEEecccc--------------HHHHHHhhccceeEEEEeCCCcEEEecCCCcc
Confidence            3468899999999999999999999999999998              77888999999999999999999999999999


Q ss_pred             EEEEeecCC
Q psy14043        184 IIVWMLYKE  192 (205)
Q Consensus       184 i~~wd~~~~  192 (205)
                      |.+|++..-
T Consensus       147 V~vW~l~~l  155 (476)
T KOG0646|consen  147 VLVWLLTDL  155 (476)
T ss_pred             EEEEEEEee
Confidence            999988663

>KOG0277|consensus

Probab=98.94  E-value=3.9e-09  Score=76.54  Aligned_cols=84  Identities=15%  Similarity=0.275  Sum_probs=69.8

Q ss_pred             cCCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEee
Q psy14043        101 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~  178 (205)
                      ..++..+....|+|. .+.+++.|.|+.+++||++...              ....+..|...+.++.||. +...|+||
T Consensus       144 ~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g--------------k~~~i~ah~~Eil~cdw~ky~~~vl~Tg  209 (311)
T KOG0277|consen  144 NGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG--------------KFMSIEAHNSEILCCDWSKYNHNVLATG  209 (311)
T ss_pred             cCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC--------------ceeEEEeccceeEeecccccCCcEEEec
Confidence            346667788889986 4889999999999999998765              2344788999999999998 66789999


Q ss_pred             cCCCcEEEEeecCCCCCCCc
Q psy14043        179 DETGLIIVWMLYKEKNPQDK  198 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~~~~~  198 (205)
                      +.|+.|++||+++-+.|...
T Consensus       210 ~vd~~vr~wDir~~r~pl~e  229 (311)
T KOG0277|consen  210 GVDNLVRGWDIRNLRTPLFE  229 (311)
T ss_pred             CCCceEEEEehhhcccccee
Confidence            99999999999987766443

>KOG1332|consensus

Probab=98.93  E-value=1.6e-09  Score=78.14  Aligned_cols=91  Identities=25%  Similarity=0.525  Sum_probs=69.4

Q ss_pred             cccCCCccccccccccC---C-----------CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEE
Q psy14043         99 IAIPNNTKVNCLAWHQN---Q-----------GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR  164 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~---~-----------~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~  164 (205)
                      +...|...++++.|.|.   |           +.+++|+.|..+++|+.+++.            ..+.++|++|++-|.
T Consensus       144 i~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~------------w~~e~~l~~H~dwVR  211 (299)
T KOG1332|consen  144 IVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS------------WKLERTLEGHKDWVR  211 (299)
T ss_pred             hhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcc------------hhhhhhhhhcchhhh
Confidence            44456667777777775   3           469999999999999998863            125678999999999


Q ss_pred             EEEEcCCC----CEEEeecCCCcEEEEeecCC--CCCCCcCCC
Q psy14043        165 AIIWNEQY----EKLTSSDETGLIIVWMLYKE--KNPQDKLPP  201 (205)
Q Consensus       165 ~~~~s~~~----~~las~~~d~~i~~wd~~~~--~~~~~~~~~  201 (205)
                      .++|.|..    .++||||+||++.||-...+  .|.-..+.+
T Consensus       212 DVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~  254 (299)
T KOG1332|consen  212 DVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEE  254 (299)
T ss_pred             hhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccccc
Confidence            99999953    56999999999999976543  333334444

>KOG0292|consensus

Probab=98.93  E-value=3.2e-09  Score=88.61  Aligned_cols=77  Identities=18%  Similarity=0.315  Sum_probs=71.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|-..++.+.||+.-.|+.++|.|.+|+||+..+..              +...+.||.--|-|..|+|....++|+|-
T Consensus        90 ~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~--------------~iavltGHnHYVMcAqFhptEDlIVSaSL  155 (1202)
T KOG0292|consen   90 LGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK--------------CIAVLTGHNHYVMCAQFHPTEDLIVSASL  155 (1202)
T ss_pred             ccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc--------------eEEEEecCceEEEeeccCCccceEEEecc
Confidence            4667789999999999999999999999999999988              77899999999999999999999999999


Q ss_pred             CCcEEEEeecC
Q psy14043        181 TGLIIVWMLYK  191 (205)
Q Consensus       181 d~~i~~wd~~~  191 (205)
                      |.||||||+.-
T Consensus       156 DQTVRVWDisG  166 (1202)
T KOG0292|consen  156 DQTVRVWDISG  166 (1202)
T ss_pred             cceEEEEeecc
Confidence            99999999854

>KOG0267|consensus

Probab=98.92  E-value=4.1e-10  Score=91.70  Aligned_cols=78  Identities=19%  Similarity=0.371  Sum_probs=72.8

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|..++.++.|++....+++|+.+|+|++||+.+..              ..++|.||...+.+|.|+|-+.+.|+|+
T Consensus        66 ~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk--------------~vrtLtgh~~~~~sv~f~P~~~~~a~gS  131 (825)
T KOG0267|consen   66 LTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAK--------------IVRTLTGHLLNITSVDFHPYGEFFASGS  131 (825)
T ss_pred             eeccCCcceeeecCcchhhhcccccCCceeeeehhhhh--------------hhhhhhccccCcceeeeccceEEecccc
Confidence            45788899999999999999999999999999999876              6689999999999999999999999999


Q ss_pred             CCCcEEEEeecC
Q psy14043        180 ETGLIIVWMLYK  191 (205)
Q Consensus       180 ~d~~i~~wd~~~  191 (205)
                      .|+-+++||...
T Consensus       132 tdtd~~iwD~Rk  143 (825)
T KOG0267|consen  132 TDTDLKIWDIRK  143 (825)
T ss_pred             ccccceehhhhc
Confidence            999999999873

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	205
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-13
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-13
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-13
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		9e-13
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		9e-13
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		9e-13
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		9e-13
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		9e-13
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-12
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-12
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-12
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-12
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-12
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-12
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-12
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-12
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-12
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-12
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-12
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-12
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-12
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-12
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		5e-12
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-12
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		4e-11
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-11
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-10
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-10
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-10
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-10
3soa_A	444	Full-Length Human Camkii Length = 444		3e-10
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		5e-10
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		5e-10
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		6e-10
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		7e-10
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		7e-10
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		7e-10
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		8e-10
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		8e-10
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		9e-10
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-09
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-09
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-09
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-09
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-09
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-09
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-09
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-09
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-09
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-09
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-09
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		6e-09
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		7e-09
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		7e-09
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		8e-09
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-08
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-08
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-08
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-08
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-08
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-08
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-08
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-08
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-08
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-08
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-08
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-08
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-08
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-08
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		4e-08
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		4e-08
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-08
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		7e-08
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		7e-08
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-08
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-08
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		9e-08
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-07
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-07
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-07
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-07
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-07
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-07
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-07
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-07
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-07
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-07
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-07
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-07
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-07
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-07
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-07
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-07
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		8e-07
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		8e-07
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		9e-07
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-06
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-06
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-06
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		4e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-06
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-06
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-06
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		4e-06
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		5e-06
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		5e-06
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-06
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		5e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		6e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		4e-05
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		4e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		5e-05
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-05
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		6e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		6e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		6e-05
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		6e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		6e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		7e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		7e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		7e-05
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-05
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		7e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		7e-05
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		7e-05
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		7e-05
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		9e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		1e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		4e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		5e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		8e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		8e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		8e-04

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL E+++ET  +IS  +Y F  E   + S  A++ I +
Sbjct: 189 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPN 103
           LL     +R T  Q L+ +W   I   N
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIKAIRRRN 276

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
              +TDMWSLG L+Y+LLSG++PFL E+ ++   +I  A+Y+F  E    IS+ A + + 
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239
Query: 75  QLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
           +LL      R TA + LQ  W  +     +TKV
Sbjct: 240 RLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL E+++ET  +IS  +Y F  E   + S  A++ I +
Sbjct: 210 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPN 103
           LL     +R    Q L+ +W   I   N
Sbjct: 270 LLVKDPKRRMXIAQSLEHSWIKAIRRRN 297

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E   H S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T  + L+  W
Sbjct: 256 LLVKETRKRLTIQEALRHPW 275

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E   H S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T  + L+  W
Sbjct: 256 LLVKETRKRLTIQEALRHPW 275

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E   H S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T  + L+  W
Sbjct: 256 LLVKETRKRLTIQEALRHPW 275

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 254 LLVKDPKKRMTIQDSLQHPW 273

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 255 LLVKDPKKRMTIQDSLQHPW 274

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    LQ  W
Sbjct: 254 LLVKDPKKRMTIQDSLQHPW 273

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL E+++ET  +IS  +Y F  E   + S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     +R    Q L+ +W
Sbjct: 256 LLVKDPKRRMXIAQSLEHSW 275

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E     S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T  + L+  W
Sbjct: 256 LLVKETRKRLTIQEALRHPW 275

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E     S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T  + L+  W
Sbjct: 256 LLVKETRKRLTIQEALRHPW 275

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E     S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T  + L+  W
Sbjct: 256 LLVKETRKRLTIQEALRHPW 275

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+W+ GV+LYILL G  PF DE +    A I    Y +P  +   ++  A+ LI  +L  
Sbjct: 212 DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 271
Query: 80  HADKRPTAGQLLQVAWFAEI-----AIPNNTKVNCL 110
           +  KR TA Q L+V W         AI     V+CL
Sbjct: 272 NPKKRITADQALKVPWICNRERVASAIHRQDTVDCL 307

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+W+ GV+LYILL G  PF DE +    A I    Y +P  +   ++  A+ LI  +L 
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
Query: 79  THADKRPTAGQLLQVAWFAEI-----AIPNNTKVNCL 110
            +  KR TA Q L+V W         AI     V+CL
Sbjct: 248 VNPKKRITADQALKVPWICNRERVASAIHRQDXVDCL 284

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+W+ GV+LYILL G  PF DE +    A I    Y +P  +   ++  A+ LI  +L 
Sbjct: 187 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 246
Query: 79  THADKRPTAGQLLQVAWFAEI-----AIPNNTKVNC 109
            +  KR TA Q L+V W         AI     V+C
Sbjct: 247 VNPKKRITADQALKVPWICNRERVASAIHRQDXVDC 282

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMW+ GV+LYILL G  PF DE +      I    Y FP  +   ++  A++LI +
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIA-----IPNNTKVNCL 110
           +L  +  KR TA + L+  W  + +     +     V+CL
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMW+ GV+LYILL G  PF DE +      I    Y FP  +   ++  A++LI +
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIA-----IPNNTKVNCL 110
           +L  +  KR TA + L+  W  + +     +     V+CL
Sbjct: 244 MLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+W+ GV+LYILL G  PF DE +    A I    Y +P  +   ++  A+ LI  +L 
Sbjct: 188 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 247
Query: 79  THADKRPTAGQLLQVAWFA 97
            +  KR TA Q L+V W  
Sbjct: 248 VNPKKRITADQALKVPWIC 266

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W+ GV+LYILL G  PF DE + +    I    Y FP  +   ++  A+ LI Q
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L  +  KR TA Q L+  W  +
Sbjct: 271 MLTINPAKRITADQALKHPWVCQ 293

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W+ GV+LYILL G  PF DE +      I    Y FP  +   ++  A++LI +
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 261
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
           +L  +  KR TA + L+  W +      +T  +C+
Sbjct: 262 MLTINPSKRITAAEALKHPWISH----RSTVASCM 292

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W+ GV+LYILL G  PF DE +      I    Y FP  +   ++  A++LI +
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
           +L  +  KR TA + L+  W +      +T  +C+
Sbjct: 251 MLTINPSKRITAAEALKHPWISH----RSTVASCM 281

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 19  TDMWSLGVLLYILLSGVSPFL---------DESEEETRAH------ISVADYSFPPEQCG 63
            D+WSLGV+LYILLSG  PF+         D  E            I    Y FP +   
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 64  HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
           HIS  A++LI +LL   A +R +A Q+LQ  W    A P NT
Sbjct: 267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA-PENT 307

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 19  TDMWSLGVLLYILLSGVSPFL---------DESEEETRAH------ISVADYSFPPEQCG 63
            D+WSLGV+LYILLSG  PF+         D  E            I    Y FP +   
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 64  HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
           HIS  A++LI +LL   A +R +A Q+LQ  W    A P NT
Sbjct: 267 HISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA-PENT 307

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W+ GV+LYILL G  PF DE + +    I    Y FP  +   ++  A+ LI Q
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 243
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L  +  KR TA + L+  W  +
Sbjct: 244 MLTINPAKRITAHEALKHPWVCQ 266

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G  TDMW++GVL Y+LLSG+SPF  E + ET  ++   D+ F  +    +S  A++ I  
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 76  LLNTHADKRPTAGQLLQVAW 95
           LL     KR T    L+  W
Sbjct: 288 LLQKEPRKRLTVHDALEHPW 307

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G   G  TDMWS+GVL YILLSG+SPF  E+++ET  ++   D++        IS   ++
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFA 97
            I +LL    + R T  Q L+  W  
Sbjct: 284 FIRKLLLADPNTRMTIHQALEHPWLT 309

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G   G  TDMWS+GVL YILLSG+SPF  E+++ET  ++   D++        IS   ++
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFA 97
            I +LL    + R T  Q L+  W  
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWLT 415

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
           TDMWS+GV+ Y+LLSG+SPFL +++ ET  +I    +    E+   IS  A+E I +LL 
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLI 328
Query: 79  THADKRPTAGQLLQVAWFAE 98
                R +A + L+  W ++
Sbjct: 329 KEKSWRISASEALKHPWLSD 348

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L  +     D+WS GV+LYILLSG  PF  ++E +    +    Y+F   Q   IS  A+
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAW 95
           +LI ++L  H   R TA Q L+  W
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPW 279

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L  +     D+WS GV+LYILLSG  PF  ++E +    +    Y+F   Q   IS  A+
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAW 95
           +LI ++L  H   R TA Q L+  W
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPW 279

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           +TDMW++G++ Y+LL+  SPF+ E  +ET  +IS  +  +  E    +S  A + I  LL
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 78  NTHADKRPTAGQLLQVAWFAE 98
             + +KRPTA   L  +W  +
Sbjct: 273 VKNPEKRPTAEICLSHSWLQQ 293

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GV+ YILL G  PF DE++ +    I  A+Y F       IS  A++ I  L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 78  NTHADKRPTAGQLLQVAWFA 97
               +KR T  Q LQ  W A
Sbjct: 258 EKDPEKRFTCEQALQHPWIA 277

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L  +     D+WS GV+LYILLSG  PF  ++E +    +    Y+F   Q   IS  A+
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAW 95
           +LI ++L  H   R TA Q L+  W
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPW 279

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GV+ YILL G  PF DE++ +    I  A+Y F       IS  A++ I  L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 78  NTHADKRPTAGQLLQVAWFA 97
               +KR T  Q LQ  W A
Sbjct: 258 EKDPEKRFTCEQALQHPWIA 277

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GV+ YILL G  PF DE++ +    I  A+Y F       IS  A++ I  L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 78  NTHADKRPTAGQLLQVAWFA 97
               +KR T  Q LQ  W A
Sbjct: 258 EKDPEKRFTCEQALQHPWIA 277

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GV+ YILL G  PF DE++ +    I  A+Y F       IS  A++ I  L+
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLM 257
Query: 78  NTHADKRPTAGQLLQVAWFA 97
               +KR T  Q LQ  W A
Sbjct: 258 EKDPEKRFTCEQALQHPWIA 277

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WS+GV+L+ILL+G  PF  ++++E    +    Y+F   +  ++S  A++LI Q+L  
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQF 278
Query: 80  HADKRPTAGQLLQVAWFAEIA 100
            + +R +A Q L+  W  E+ 
Sbjct: 279 DSQRRISAQQALEHPWIKEMC 299

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI ++L 
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQ 253
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           T    RPT  +LL   +F    IP    + CL 
Sbjct: 254 TDPTARPTINELLNDEFFTSGYIPARLPITCLT 286

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI ++L 
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQ 277
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           T    RPT  +LL   +F    IP    + CL 
Sbjct: 278 TDPTARPTINELLNDEFFTSGYIPARLPITCLT 310

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI ++L 
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQ 275
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           T    RPT  +LL   +F    IP    + CL 
Sbjct: 276 TDPTARPTINELLNDEFFTSGYIPARLPITCLT 308

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI ++L 
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQ 257
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           T    RPT  +LL   +F    IP    + CL 
Sbjct: 258 TDPTARPTINELLNDEFFTSGYIPARLPITCLT 290

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI ++L 
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQ 253
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           T    RPT  +LL   +F    IP    + CL 
Sbjct: 254 TDPTARPTINELLNDEFFTSGYIPARLPITCLT 286

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI ++L 
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQ 251
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           T    RPT  +LL   +F    IP    + CL 
Sbjct: 252 TDPTARPTINELLNDEFFTSGYIPARLPITCLT 284

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 8   LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFL---------DESE------EETRAHISV 52
             D  +      D+WSLGV+LYI+LSG  PF+         D  E       +    I  
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 255
Query: 53  ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
             Y FP +   HIS  A++LI +LL   A +R +A Q+LQ  W
Sbjct: 256 GKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEE-TRAHISVADYSFPPEQCGHISVPAR 70
           G + GP  DMWS+G++ YILL G  PF DE  ++     I   +Y F       +S+ A+
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAK 283
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAW 95
           +L+ +L+     KR T  Q LQ  W
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPW 308

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D WS GV++Y+LL G  PF   ++ E    I    ++FP +   ++S  A  LI +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           LL     +R T+ Q L+  WF +
Sbjct: 245 LLTKSPKQRITSLQALEHEWFEK 267

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D WS GV++Y+LL G  PF   ++ E    I    ++FP +   ++S  A  LI +
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           LL     +R T+ Q L+  WF +
Sbjct: 262 LLTKSPKQRITSLQALEHEWFEK 284

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 4   AVLKLIDLGSSA-------GPSTDMWSLGVLLYILLSGVSPFLDES----EEETRAHISV 52
           A+LKL D G +          S DMWSLGV++YILL G  PF            +  I +
Sbjct: 157 AILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 216
Query: 53  ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
             Y FP  +   +S   + LI  LL T   +R T  + +   W  +
Sbjct: 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G+ PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARD 239
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +A +R T  ++L+  W
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPW 263

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G+ PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARD 239
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +A +R T  ++L+  W
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPW 263

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 185 GRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 240
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 241 LISRLLKHNPSQRPXLREVLEHPWITANSSKPSNCQ 276

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 236
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N++
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQ 272

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L        D+WS GV+LYILL G  PF  ++++E    +    +SF P     +S  A+
Sbjct: 178 LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 237
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
           +L+  +L     KR +A + L   W  +     +T V
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDV 274

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GV+ YILL G  PF DE++ +    I  A+Y F       IS  A++ I  L+
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLM 261
Query: 78  NTHADKRPTAGQLLQVAWFA 97
               +KR T  Q  +  W A
Sbjct: 262 EKDPNKRYTCEQAARHPWIA 281

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L        D+WS GV++YILL G  PF  +++++    +    Y F      +IS  A+
Sbjct: 220 LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAEIA 100
           ELI  +L    +KR TA + L   W  + A
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 252
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 253 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 288

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 236
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 272

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 236
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 272

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 237
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 273

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 271

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 237
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 273

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 240
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 276

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 240
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 276

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 261
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 297

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 261
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 297

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 238
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 274

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 271

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 271

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 240
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 276

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEE----TRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF   + +      +  I +  Y FP  +   +S  A++LI
Sbjct: 190 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 249
Query: 74  GQLLNTHADKRPTAGQLLQVAW 95
             LL T   +R T  Q +   W
Sbjct: 250 RLLLKTDPTERLTITQFMNHPW 271

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 240
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 276

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 271

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 238
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNNTK 106
           LI +LL  +  +RP   ++L+  W  A  + P+N +
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQ 274

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEE----TRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF   + +      +  I +  Y FP  +   +S  A++LI
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 268
Query: 74  GQLLNTHADKRPTAGQLLQVAW 95
             LL T   +R T  Q +   W
Sbjct: 269 RLLLKTDPTERLTITQFMNHPW 290

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 238
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF-AEIAIPNN 104
           LI +LL  +  +RP   ++L+  W  A  + P+N
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WS GV++Y LL+G  PF   S EE +   +  + ++  E C  ++  A +L+ Q+L  
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQMLTK 265
Query: 80  HADKRPTAGQLLQVAWFAE 98
             ++RP+A Q+L   WF +
Sbjct: 266 DPERRPSAAQVLHHEWFKQ 284

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 238
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPW 262

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 238
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPW 262

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 232
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 233 LISRLLKHNPSQRPMLREVLEHPW 256

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPW 259

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 234
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 235 LISRLLKHNPSQRPMLREVLEHPW 258

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPW 259

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPW 259

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 239
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 240 LISRLLKHNPSQRPMLREVLEHPW 263

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARD 238
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPW 262

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 14  SAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELI 73
           S GP  D WS GVLL++LL G  PF   ++ +T + +      F       +S  AR+L+
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLL 311
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAEIA 100
             LLN + D+R  A + LQ  W ++ +
Sbjct: 312 SNLLNRNVDERFDAMRALQHPWISQFS 338

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
             D+WS GV+LYILL G  PF  ++++E    +    +SF P     +S  A++L+  +L
Sbjct: 202 KCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML 261
Query: 78  NTHADKRPTAGQLLQVAWFAEIA 100
                KR +A + L   W  +  
Sbjct: 262 TYEPSKRISAEEALNHPWIVKFC 284

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WSLG +LY LL G  PF     +ET   I   +YS P     HI+  A  LI ++L+ 
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIRRMLHA 279
Query: 80  HADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
               RP+  +LL   +F     P     +CL 
Sbjct: 280 DPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 311

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WSLG +LY LL G  PF     +ET   I   +YS P     HI+  A  LI ++L+
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIRRMLH 278
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
                RP+  +LL   +F     P     +CL 
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 311

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WSLG +LY LL G  PF     +ET   I   +YS P     HI+  A  LI ++L+
Sbjct: 223 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIRRMLH 278
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
                RP+  +LL   +F     P     +CL 
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 311

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D+WSLG +LY LL G  PF     +ET   I   +YS P     HI+  A  LI ++L+
Sbjct: 207 VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIRRMLH 262
Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
                RP+  +LL   +F     P     +CL 
Sbjct: 263 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLT 295

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + ++T   IS  +++FP      ++  AR+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP----DFVTEGARD 235
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  +  +RP   ++L+  W
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPW 259

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 18  STDMWSLGVLLYILLSGVSPFL---DESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           + D+WSLGVLLY +L+G +PF    D++ EE  A I    +S        +S  A++L+ 
Sbjct: 200 ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVS 259
Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           ++L+    +R TA  +L+  W 
Sbjct: 260 KMLHVDPHQRLTAALVLRHPWI 281

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 198 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 257
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 258 RNLLKTEPTQRMTITEFMNHPWIMQ 282

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 256
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 257 RNLLKTEPTQRMTITEFMNHPWIMQ 281

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 204 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 263
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 264 RNLLKTEPTQRMTITEFMNHPWIMQ 288

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 258
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 259 RNLLKTEPTQRMTITEFMNHPWIMQ 283

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 243 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 302
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 303 RNLLKTEPTQRMTITEFMNHPWIMQ 327

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 256
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 257 RNLLKTEPTQRMTITEFMNHPWIMQ 281

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 203 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 262
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 263 RNLLKTEPTQRMTITEFMNHPWIMQ 287

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 249 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 308
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 309 RNLLKTEPTQRMTITEFMNHPWIMQ 333

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 213 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 272
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 273 RNLLKTEPTQRMTITEFMNHPWIMQ 297

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 258
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 259 RNLLKTEPTQRMTITEFMNHPWIMQ 283

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S   + LI
Sbjct: 205 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 264
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  + +   W  +
Sbjct: 265 RNLLKTEPTQRMTITEFMNHPWIMQ 289

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 239
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 240 FLILNPSKRGTLEQIMKDRW 259

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 246
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 247 FLILNPSKRGTLEQIMKDRW 266

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 246
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 247 FLILNPSKRGTLEQIMKDRW 266

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 246
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 247 FLILNPSKRGTLEQIMKDRW 266

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 246
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 247 FLILNPSKRGTLEQIMKDRW 266

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 246
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 247 FLILNPSKRGTLEQIMKDRW 266

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 20  DMWSLGVLLYILLSGVSPFLD---ESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 76
           D+WSLG+LLY +L+G +PF +   ++ EE    I    ++        +S  A++L+ ++
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKM 266
Query: 77  LNTHADKRPTAGQLLQVAWFAE 98
           L+    +R TA Q+LQ  W  +
Sbjct: 267 LHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 20  DMWSLGVLLYILLSGVSPFLD---ESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 76
           D+WSLG+LLY +L+G +PF +   ++ EE    I    ++        +S  A++L+ ++
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKM 266
Query: 77  LNTHADKRPTAGQLLQVAWFAE 98
           L+    +R TA Q+LQ  W  +
Sbjct: 267 LHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKR 247
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 248 FLVLNPIKRGTLEQIMKDRW 267

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ +
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKR 244
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+++  W
Sbjct: 245 FLVLNPIKRGTLEQIMKDRW 264

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 38/78 (48%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           + D WS+GV+ YILL G  PF +E+E +    I    Y F       IS  A++ I  LL
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 78  NTHADKRPTAGQLLQVAW 95
               ++R T  + L   W
Sbjct: 247 EKDPNERYTCEKALSHPW 264

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 381
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 382 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 367
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 242
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 242
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 242
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 241
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 242 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 18  STDMWSLGVLLYILLSGVSPFL---DESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           + D+WSLGVLLY  L+G +PF    D++ EE  A I    +S        +S  A++L+ 
Sbjct: 200 ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVS 259
Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           + L+    +R TA  +L+  W 
Sbjct: 260 KXLHVDPHQRLTAALVLRHPWI 281

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 8   LIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD------YSFPPE 60
           L+ +G++    + D WSLGV+L+I LSG  PF      E R  +S+ D      Y+F PE
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----SEHRTQVSLKDQITSGKYNFIPE 248
Query: 61  QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
               +S  A +L+ +LL      R T  + L+  W  +
Sbjct: 249 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W  GV+L+ILLSG  PF   ++E     I    Y   P Q  HIS  A++L+ +
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L     +R T  + L   W  E
Sbjct: 270 MLMLDPAERITVYEALNHPWLKE 292

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W  GV+L+ILLSG  PF   ++E     I    Y   P Q  HIS  A++L+ +
Sbjct: 211 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L     +R T  + L   W  E
Sbjct: 270 MLMLDPAERITVYEALNHPWLKE 292

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W  GV+L+ILLSG  PF   ++E     I    Y   P Q  HIS  A++L+ +
Sbjct: 213 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L     +R T  + L   W  E
Sbjct: 272 MLMLDPAERITVYEALNHPWLKE 294

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
           S+ G  +D+WSLG + Y LL G  PF  ++ + T   + +ADY  P      +S+ A++L
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP----SFLSIEAKDL 242
Query: 73  IGQLLNTHADKRPTAGQLLQVAWFAE 98
           I QLL  +   R +   +L   + + 
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFMSR 268

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     + S     L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYXSTDCENLLKK 246
Query: 76  LLNTHADKRPTAGQLLQVAW 95
            L  +  KR T  Q+ +  W
Sbjct: 247 FLILNPSKRGTLEQIXKDRW 266

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L  +     D+WS GV+LYILLSG  PF   +E +    +    Y+F   Q   +S  A+
Sbjct: 206 LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK 265
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAW 95
           +LI ++L      R +A   L   W
Sbjct: 266 DLIRKMLTYVPSMRISARDALDHEW 290

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WS GV+LYILLSG  PF   +E +    +    Y+F   Q   +S  A++LI ++L  
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 268
Query: 80  HADKRPTAGQLLQVAW 95
               R +A   L   W
Sbjct: 269 VPSMRISARDALDHEW 284

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WS GV+LYILLSG  PF   +E +    +    Y+F   Q   +S  A++LI ++L  
Sbjct: 232 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 291
Query: 80  HADKRPTAGQLLQVAW 95
               R +A   L   W
Sbjct: 292 VPSMRISARDALDHEW 307

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G +     D+W  GVL Y  L G+ PF   S  ET   I   D  FPP     +S  +++
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKD 242
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  H  +R     +++  W
Sbjct: 243 LISKLLRYHPPQRLPLKGVMEHPW 266

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WS GV+LYILLSG  PF   +E +    +    Y+F   Q   +S  A++LI ++L  
Sbjct: 233 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 292
Query: 80  HADKRPTAGQLLQVAW 95
               R +A   L   W
Sbjct: 293 VPSMRISARDALDHEW 308

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G +     D+W  GVL Y  L G+ PF   S  ET   I   D  FPP     +S  +++
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKD 241
Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           LI +LL  H  +R     +++  W
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEHPW 265

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEE-------ETRAHISVADYSFPPEQCGHISVPAR 70
           S D+WSLGV+LY +LSG  PF             E    I   D+SF  E   ++S  A+
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAK 248
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAE 98
           +LI  LL    +KR     L    W  +
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQD 276

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY++L    PF DES      +IS   Y+ P      +S  A  LI 
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 245
Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           ++L  +   R +  +++Q  WF
Sbjct: 246 RMLIVNPLNRISIHEIMQDDWF 267

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY++L    PF DES      +IS   Y+ P      +S  A  LI 
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 244
Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           ++L  +   R +  +++Q  WF
Sbjct: 245 RMLIVNPLNRISIHEIMQDDWF 266

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY++L    PF DES      +IS   Y+ P      +S  A  LI 
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLIK 235
Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           ++L  +   R +  +++Q  WF
Sbjct: 236 RMLIVNPLNRISIHEIMQDDWF 257

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY++L    PF DES      +IS   Y+ P      +S  A  LI 
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIK 239
Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           ++L  +   R +  +++Q  WF
Sbjct: 240 RMLIVNPLNRISIHEIMQDDWF 261

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELI 73
           S D WSLGV+ YILL G  PF            +  I    Y FP  +   +S   + LI
Sbjct: 243 SCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLI 302
Query: 74  GQLLNTHADKRPTAGQLLQVAWFAE 98
             LL T   +R T  +     W  +
Sbjct: 303 RNLLKTEPTQRXTITEFXNHPWIXQ 327

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
           S    + D WSLGVL+Y LL+G SPF  + E+ ++A IS       P     +S  A++L
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDL 296
Query: 73  IGQLLNTHADKRPTAG 88
           I +LL     KR   G
Sbjct: 297 IQRLLMKDPKKRLGCG 312

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 79
           D+WS GV+LYILLSG  PF   +E +    +    Y+F   Q   +S  A++LI + L  
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTY 268
Query: 80  HADKRPTAGQLLQVAW 95
               R +A   L   W
Sbjct: 269 VPSXRISARDALDHEW 284

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I + S    + D WSLG L+Y +L+G  PF  E+ ++T   I     + PP    +++  
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQE 247
Query: 69  ARELIGQLLNTHADKRPTAG 88
           AR+L+ +LL  +A  R  AG
Sbjct: 248 ARDLLKKLLKRNAASRLGAG 267

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I + S    + D WSLG L+Y +L+G  PF  E+ ++T   I     + PP    +++  
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQE 247
Query: 69  ARELIGQLLNTHADKRPTAG 88
           AR+L+ +LL  +A  R  AG
Sbjct: 248 ARDLLKKLLKRNAASRLGAG 267

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS GV++Y LL+G  PF    +      I   +Y F   +    S   ++L+ +
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAI 101
            L     KR TA + L   +F +  +
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQYVV 292

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS GV++Y LL+G  PF    +      I   +Y F   +    S   ++L+ +
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266
Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAI 101
            L     KR TA + L   +F +  +
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQYVV 292

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 2   NGAVLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 61
           N A  ++I+    AGP  D+WS G++LY++L G  PF DE        ++   Y  P   
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP--- 228
Query: 62  CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
              +S  A+ LI +++     +R T  ++ +  WF
Sbjct: 229 -DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L+   +KR +A +LLQ   F +IA P
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQ-HQFLKIAKP 278

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L+   +KR +A +LLQ   F +IA P
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQ-HQFLKIAKP 278

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 38/83 (45%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS GV++Y LL+G  PF    +      I   +Y F   +    S   ++L+ +
Sbjct: 194 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 253
Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
            L     KR TA + L   +F +
Sbjct: 254 FLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 58
           GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E    A I   +Y FP +        AR+L
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK----FFPKARDL 264
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 265 VEKLLVLDATKR 276

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D WSLGV +Y +L G +PF  ES  ET   I      F  P Q   +S  A++LI 
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIR 318
Query: 75  QLL 77
           +L+
Sbjct: 319 RLI 321

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARE 71
           G   D+WS GV LY++L G  PF D  E     +T   I    Y+ P     HIS   R 
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRH 252
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
           LI ++      KR +  ++    WF
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E    A I   +Y FP +        AR+L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK----FFPKARDL 264
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 265 VEKLLVLDATKR 276

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARE 71
           G   D+WS GV LY++L G  PF D  E     +T   I    Y+ P     HIS   R 
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRH 251
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
           LI ++      KR +  ++    WF
Sbjct: 252 LISRIFVADPAKRISIPEIRNHEWF 276

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARE 71
           G   D+WS GV LY++L G  PF D  E     +T   I    Y+ P     HIS   R 
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRH 252
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
           LI ++      KR +  ++    WF
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARE 71
           G   D+WS GV LY++L G  PF D  E     +T   I    Y+ P     HIS   R 
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRH 252
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
           LI ++      KR +  ++    WF
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARE 71
           G   D+WS GV LY++L G  PF D  E     +T   I    Y+ P     HIS   R 
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRH 252
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
           LI ++      KR +  ++    WF
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG     S D WS GVLLY +L G SPF  + EEE    I + +  +P      +   A+
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAK 247
Query: 71  ELIGQLLNTHADKR-PTAGQLLQVAWFAEI 99
           +L+ +L     +KR    G + Q   F EI
Sbjct: 248 DLLVKLFVREPEKRLGVRGDIRQHPLFREI 277

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I LG     S D WS GVLLY +L G SPF  + EEE    I + +  +P      +   
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKE 244
Query: 69  ARELIGQLLNTHADKR-PTAGQLLQVAWFAEI 99
           A++L+ +L     +KR    G + Q   F EI
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W+ GV+L+ LL+G  PF    +      I    Y F   +    S   ++LI +
Sbjct: 283 GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR 342
Query: 76  LLNTHADKRPTAGQLLQVAWF 96
           LL    + R TA Q LQ  +F
Sbjct: 343 LLQVDPEARLTAEQALQHPFF 363

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP--A 69
           G       D+W +GVL Y LL G  PF   S  ET   I   D  FP       SVP  A
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP------ASVPTGA 248
Query: 70  RELIGQLLNTHADKRPTAGQLLQVAW 95
           ++LI +LL  +  +R    Q+    W
Sbjct: 249 QDLISKLLRHNPSERLPLAQVSAHPW 274

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY LL G  PF DE        I    +  P     +++     L+ 
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 75  QLLNTHADKRPTAGQLLQVAWFAE 98
            +L     KR T   + +  WF +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY LL G  PF DE        I    +  P     +++     L+ 
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 75  QLLNTHADKRPTAGQLLQVAWFAE 98
            +L     KR T   + +  WF +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L    +KR +A +LLQ   F +IA P
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQ-HQFLKIAKP 278

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D WSLGV +Y +L G +PF  ES  ET   I   +  F  P     +S  A++LI 
Sbjct: 275 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQ 334
Query: 75  QLL 77
           +L+
Sbjct: 335 RLI 337

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D WSLGV +Y +L G +PF  ES  ET   I   +  F  P     +S  A++LI 
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQ 318
Query: 75  QLL 77
           +L+
Sbjct: 319 RLI 321

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
            +D+WSLG LLY + +  SPF  +          +    +PP    H S   R+L+   +
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCI 275
Query: 78  NTHADKRPTAGQLLQVA 94
           N   +KRP    +  VA
Sbjct: 276 NPDPEKRPDVTYVYDVA 292

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L + +G   D+WS GV LY + +G+ PF  ++  +   +I    Y+ P    G    P  
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP----GDCGPPLS 241
Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
           +L+  +L     KR +  Q+ Q +WF +   P    V
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G S D W+ GVLLY +L+G +PF  E E+E    I   + ++P      +S  A  +   
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKG 575
Query: 76  LLNTHADKRPTAG 88
           L+  H  KR   G
Sbjct: 576 LMTKHPGKRLGCG 588

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 249
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L    +KR +A +L+Q   F +IA P
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQ-HQFLKIAKP 279

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 71
           GP  D+WSLG++   ++ G  P+L+E+    RA   +A    P    PE+   +S   R+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 249
Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + + L    +KR +A +L+Q   F +IA P
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQ-HQFLKIAKP 279

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 264
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 265 VEKLLVLDATKR 276

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 261
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 262 VEKLLVLDATKR 273

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 261
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 262 VEKLLVLDATKR 273

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D WS G+L+Y +L+G +PF D +  +T   I  A+  FPP      +   ++L+ +L+
Sbjct: 183 SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLSRLI 238
Query: 78  NTHADKR 84
                +R
Sbjct: 239 TRDLSQR 245

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 246
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 247 VEKLLVLDATKR 258

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 240
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 241 VEKLLVLDATKR 252

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 239
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 240 VEKLLVLDATKR 251

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 269
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 270 VEKLLVLDATKR 281

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 264
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 265 VEKLLVLDATKR 276

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 262
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 263 VEKLLVLDATKR 274

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 241
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 242 VEKLLVLDATKR 253

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 262
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 263 VEKLLVLDATKR 274

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 242
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 243 VEKLLVLDATKR 254

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 262
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 263 VEKLLVLDATKR 274

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 262
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 263 VEKLLVLDATKR 274

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 264
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 265 VEKLLVLDATKR 276

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 265
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 266 VEKLLVLDATKR 277

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 264
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 265 VEKLLVLDATKR 276

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP +        AR+L
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDL 265
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 266 VEKLLVLDATKR 277

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 13  SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
            SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP          AR+L
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----AAFFPKARDL 267
Query: 73  IGQLLNTHADKR 84
           + +LL   A KR
Sbjct: 268 VEKLLVLDATKR 279

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G S D W+ GVLLY +L+G +PF  E E+E    I   + ++P      +S  A  +   
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKG 254
Query: 76  LLNTHADKRPTAG 88
           L+  H  KR   G
Sbjct: 255 LMTKHPGKRLGCG 267

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY LL G  PF D+        I    +  P     +++     L+ 
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVISLLK 248
Query: 75  QLLNTHADKRPTAGQLLQVAWFAE 98
            +L     KR T   + +  WF +
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQ 272

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D W+LG LLY +++G SPF    ++  R  +       P E     S  AR L  QLL
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424
Query: 78  NTHADKR 84
                +R
Sbjct: 425 CKDPAER 431

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G S D W+ GVLLY +L+G  PF  E E+E    I   + S+P      +S  A  +   
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICKG 253
Query: 76  LLNTHADKRPTAG 88
           L+  H  KR   G
Sbjct: 254 LMTKHPAKRLGCG 266

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 18  STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 77
           S D W+LG LLY +++G SPF    ++  R  +       P E     S  AR L  QLL
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424
Query: 78  NTHADKR 84
                +R
Sbjct: 425 CKDPAER 431

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	205
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-29
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-28
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-28
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	5e-28
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	6e-28
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	7e-28
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-28
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-27
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-27
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-26
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-26
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-26
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-25
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-25
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-25
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-25
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-25
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-25
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-25
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-24
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-24
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-24
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-24
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-24
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-24
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-24
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-24
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-23
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-23
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-23
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-23
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-23
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-22
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-22
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-21
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-20
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-20
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-20
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	9e-20
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-19
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-18
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-18
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-17
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-17
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-17
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-17
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-17
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-17
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-16
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-16
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-16
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-16
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-15
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-15
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-14
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-14
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-14
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-14
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-14
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-14
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-14
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-13
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-12
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-12
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-12
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-12
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-12
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	9e-12
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	9e-12
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	9e-12
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-11
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-11
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-11
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-11
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-11
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-10
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-10
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-07
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	7e-07
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	2e-04
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	6e-04
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	1e-06
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-06
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	5e-06
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	3e-05
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	9e-05
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	2e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-06
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	1e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-05
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	3e-05
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	3e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-05
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	8e-05
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	8e-04
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	9e-05
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	8e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	9e-05
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	1e-04
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-04
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	2e-04
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	2e-04
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	2e-04
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	3e-04
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	5e-04
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	3e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	7e-04

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  108 bits (273), Expect = 6e-29
 Identities = 36/92 (39%), Positives = 54/92 (58%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             +TDMWSLG L+Y+LLSG++PFL E+ ++   +I  A+Y+F  E    IS+ A + + +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
           LL      R TA + LQ  W  +     +TKV
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  107 bits (269), Expect = 3e-28
 Identities = 30/91 (32%), Positives = 48/91 (52%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             +TDMW++G++ Y+LL+  SPF+ E  +ET  +IS  +  +  E    +S  A + I  
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS 270

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
           LL  + +KRPTA   L  +W  +    N   
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQQWDFENLFH 301

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  106 bits (266), Expect = 3e-28
 Identities = 37/88 (42%), Positives = 51/88 (57%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL E+++ET  +IS  +Y F  E   + S  A++ I +
Sbjct: 189 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPN 103
           LL     +R T  Q L+ +W   I   N
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIKAIRRRN 276

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  107 bits (268), Expect = 5e-28
 Identities = 34/90 (37%), Positives = 48/90 (53%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E     S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
           LL     KR T  + L+  W   +      
Sbjct: 256 LLVKETRKRLTIQEALRHPWITPVDTQQAM 285

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  106 bits (266), Expect = 6e-28
 Identities = 35/90 (38%), Positives = 49/90 (54%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A+I+   Y F  E   H S  A++ I +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
           LL     KR T  + L+  W   +      
Sbjct: 256 LLVKETRKRLTIQEALRHPWITPVDNQQAM 285

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  106 bits (266), Expect = 7e-28
 Identities = 35/89 (39%), Positives = 48/89 (53%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++ I +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
           LL     KR T    LQ  W         
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQA 283

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  106 bits (267), Expect = 8e-28
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
              TDMWS+GV+ Y+LLSG+SPFL +++ ET  +I    +    E+   IS  A+E I +
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
           LL      R +A + L+  W ++  + + 
Sbjct: 326 LLIKEKSWRISASEALKHPWLSDHKLHSR 354

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  106 bits (267), Expect = 1e-27
 Identities = 31/95 (32%), Positives = 47/95 (49%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G  TDMW++GVL Y+LLSG+SPF  E + ET  ++   D+ F  +    +S  A++ I  
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
           LL     KR T    L+  W         +++   
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSS 322

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  107 bits (269), Expect = 2e-27
 Identities = 33/91 (36%), Positives = 47/91 (51%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G  TDMWS+GVL YILLSG+SPF  E+++ET  ++   D++        IS   ++ I +
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
           LL    + R T  Q L+  W      P    
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  101 bits (254), Expect = 2e-26
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+WS GV++Y LL+G  PF   S EE +   +  + ++  E C  ++  A +L+ Q
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQ 261

Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L    ++RP+A Q+L   WF +
Sbjct: 262 MLTKDPERRPSAAQVLHHEWFKQ 284

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  101 bits (254), Expect = 3e-26
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D WS GVLL++LL G  PF   ++ +T + +      F       +S  AR+L+  
Sbjct: 254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSN 313

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
           LLN + D+R  A + LQ  W ++ +     K++
Sbjct: 314 LLNRNVDERFDAMRALQHPWISQFS-DKIYKMS 345

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =   99 bits (250), Expect = 7e-26
 Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 33/142 (23%)

Query: 2   NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLS 33
            GA +KL D G +                                 D+W+ GV+LYILL 
Sbjct: 143 KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202

Query: 34  GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 93
           G  PF DE +    A I    Y +P  +   ++  A+ LI  +L  +  KR TA Q L+V
Sbjct: 203 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262

Query: 94  AWFAEIA-----IPNNTKVNCL 110
            W          I     V+CL
Sbjct: 263 PWICNRERVASAIHRQDTVDCL 284

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 99.6 bits (249), Expect = 1e-25
 Identities = 25/89 (28%), Positives = 39/89 (43%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   DMWS GV++Y LL+G  PF    +      I   +Y F   +    S   ++L+ +
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 266

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
            L     KR TA + L   +F +  +   
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 99.2 bits (248), Expect = 1e-25
 Identities = 29/83 (34%), Positives = 44/83 (53%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP  D WS GV++Y+LL G  PF   ++ E    I    ++FP +   ++S  A  LI +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244

Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           LL     +R T+ Q L+  WF +
Sbjct: 245 LLTKSPKQRITSLQALEHEWFEK 267

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 99.2 bits (248), Expect = 2e-25
 Identities = 27/89 (30%), Positives = 39/89 (43%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             + D WS+GV+ YILL G  PF +E+E +    I    Y F       IS  A++ I  
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH 244

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
           LL    ++R T  + L   W       + 
Sbjct: 245 LLEKDPNERYTCEKALSHPWIDGNTALHR 273

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 98.9 bits (247), Expect = 3e-25
 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 11/107 (10%)

Query: 3   GAVLKLID-------LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETR----AHIS 51
            A+LKL D        G     S DMWSLGV++YILL G  PF               I 
Sbjct: 156 NAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 215

Query: 52  VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
           +  Y FP  +   +S   + LI  LL T   +R T  + +   W  +
Sbjct: 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 99.7 bits (249), Expect = 3e-25
 Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 28/125 (22%)

Query: 2   NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLS 33
            GA +KL D G +                                 D+W+ GV+LYILL 
Sbjct: 166 KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225

Query: 34  GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 93
           G  PF DE +    A I    Y +P  +   ++  A+ LI  +L  +  KR TA Q L+V
Sbjct: 226 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285

Query: 94  AWFAE 98
            W   
Sbjct: 286 PWICN 290

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 99.7 bits (249), Expect = 7e-25
 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 29/126 (23%)

Query: 2   NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILL 32
            GA +KL D G +                              G   D+W+ GV+LYILL
Sbjct: 148 KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207

Query: 33  SGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 92
            G  PF DE +      I    Y FP  +   ++  A++LI ++L  +  KR TA + L+
Sbjct: 208 VGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267

Query: 93  VAWFAE 98
             W + 
Sbjct: 268 HPWISH 273

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 97.3 bits (243), Expect = 7e-25
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 27/124 (21%)

Query: 4   AVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVS 36
             +K+ID G S                                D+WS GV+LYILLSG  
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTP 220

Query: 37  PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
           PF  ++E +    +    Y+F   Q   IS  A++LI ++L  H   R TA Q L+  W 
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

Query: 97  AEIA 100
            + +
Sbjct: 281 QKYS 284

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 99.8 bits (249), Expect = 9e-25
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 27/125 (21%)

Query: 3   GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
              +K++D G S+                               D+WS GV++YILL G 
Sbjct: 185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGY 244

Query: 36  SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
            PF  +++++    +    Y F      +IS  A+ELI  +L    +KR TA + L   W
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304

Query: 96  FAEIA 100
             + A
Sbjct: 305 IKKYA 309

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 27/130 (20%)

Query: 3   GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
              +K+ID G S                                D+WS GV+LYILLSG 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219

Query: 36  SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
            PF  ++E +    +    Y+F   Q   IS  A++LI ++L  H   R TA Q L+  W
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279

Query: 96  FAEIAIPNNT 105
             + +    T
Sbjct: 280 IQKYSSETPT 289

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 27/121 (22%)

Query: 3   GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
            A +++ID G S                                D+WS GV+LYILLSG 
Sbjct: 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGC 224

Query: 36  SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
            PF   +E +    +    Y+F   Q   +S  A++LI ++L      R +A   L   W
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284

Query: 96  F 96
            
Sbjct: 285 I 285

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 96.2 bits (240), Expect = 4e-24
 Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 30/126 (23%)

Query: 2   NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILL 32
           N A +KL   G +                              G   D+W  GV+L+ILL
Sbjct: 168 NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227

Query: 33  SGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 92
           SG  PF    E      I    Y   P Q  HIS  A++L+ ++L     +R T  + L 
Sbjct: 228 SGCLPFYGTKERLFEG-IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286

Query: 93  VAWFAE 98
             W  E
Sbjct: 287 HPWLKE 292

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 96.2 bits (240), Expect = 5e-24
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPF---LDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
             + D+WSLGVLLY +L+G +PF    D++ EE  A I    +S        +S  A++L
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDL 257

Query: 73  IGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
           + ++L+    +R TA  +L+  W          ++N
Sbjct: 258 VSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLN 293

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 95.8 bits (239), Expect = 5e-24
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADYSFPPEQCGHISVPARELIG 74
             + D WSLGV+L+I LSG  PF +   + + +  I+   Y+F PE    +S  A +L+ 
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 256

Query: 75  QLLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
           +LL      R T  + L+  W  +  +   
Sbjct: 257 KLLVVDPKARFTTEEALRHPWLQDEDMKRK 286

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 97.5 bits (243), Expect = 6e-24
 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 27/133 (20%)

Query: 3   GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGV 35
            A++K++D G SA                               D+WS+GV+L+ILL+G 
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGY 234

Query: 36  SPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 95
            PF  ++++E    +    Y+F   +  ++S  A++LI Q+L   + +R +A Q L+  W
Sbjct: 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294

Query: 96  FAEIAIPNNTKVN 108
             E+     + + 
Sbjct: 295 IKEMCSKKESGIE 307

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 95.9 bits (239), Expect = 7e-24
 Identities = 26/81 (32%), Positives = 38/81 (46%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+W+ GV+L+ LL+G  PF    +      I    Y F   +    S   ++LI +
Sbjct: 283 GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR 342

Query: 76  LLNTHADKRPTAGQLLQVAWF 96
           LL    + R TA Q LQ  +F
Sbjct: 343 LLQVDPEARLTAEQALQHPFF 363

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 96.7 bits (241), Expect = 7e-24
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEET-RAHISVADYSFPPEQCGHISVPARELIG 74
             + D WSLGV+L+I LSG  PF +   + + +  I+   Y+F PE    +S  A +L+ 
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 381

Query: 75  QLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
           +LL      R T  + L+  W  +  +    +
Sbjct: 382 KLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 413

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           GP  DMWS+G++ YILL G  PF DE  ++     I   +Y F       +S+ A++L+ 
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVR 287

Query: 75  QLLNTHADKRPTAGQLLQVAWFAEIA 100
           +L+     KR T  Q LQ  W    A
Sbjct: 288 KLIVLDPKKRLTTFQALQHPWVTGKA 313

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 95.1 bits (237), Expect = 1e-23
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH----ISVADYSFPPEQCGHISVPARE 71
             S DMWSLGV++YILL G  PF   + +         I +  Y FP  +   +S  A++
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQ 266

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAE 98
           LI  LL T   +R T  Q +   W  +
Sbjct: 267 LIRLLLKTDPTERLTITQFMNHPWINQ 293

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 93.9 bits (234), Expect = 2e-23
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-------ISVADYSFPPEQCGHISVP 68
             S D+WSLGV+LY +LSG  PF       T          I   D+SF  E   ++S  
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246

Query: 69  ARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
           A++LI  LL    +KR     L    W  + +  ++ 
Sbjct: 247 AKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 92.6 bits (231), Expect = 4e-23
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI +
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQK 248

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLA 111
           +L T    RPT  +LL   +F    IP    + CL 
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCLT 284

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 92.8 bits (231), Expect = 7e-23
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+WS+G ++Y LL G  PF     +ET   I   +YS P     HI+  A  LI +
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQK 274

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
           +L T    RPT  +LL   +F    IP    + CL
Sbjct: 275 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCL 309

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 92.0 bits (229), Expect = 1e-22
 Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 17/117 (14%)

Query: 5   VLKLIDLGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-------------- 49
           V++     +S      D+WSLGV+LYILLSG  PF+     +                  
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251

Query: 50  -ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNT 105
            I    Y FP +   HIS  A++LI +LL   A +R +A Q+LQ  W    A P NT
Sbjct: 252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA-PENT 307

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 92.9 bits (231), Expect = 1e-22
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA----HISVADYSFPPEQCGHISVPARE 71
             S DMWSLGV++YILL G  PF               I +  Y FP  +   +S   + 
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 300

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAE 98
           LI  LL T   +R T  + +   W  +
Sbjct: 301 LIRNLLKTEPTQRMTITEFMNHPWIMQ 327

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 88.4 bits (220), Expect = 1e-21
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G  +D+WSLG + Y LL G  PF  ++ + T   + +ADY  P      +S+ A++LI Q
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS----FLSIEAKDLIHQ 245

Query: 76  LLNTHADKRPTAGQLLQVAWFAEIAIP 102
           LL  +   R +   +L   + +  +  
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMSRNSST 272

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 85.9 bits (212), Expect = 4e-20
 Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ-----CGHISVPAR 70
             + + W LG+ +Y +     PF   +     +    +      +      C  +    +
Sbjct: 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK 330

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
            LIG+ LN    +R    + ++   F ++
Sbjct: 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQL 359

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 83.8 bits (208), Expect = 7e-20
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+LI +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISR 240

Query: 76  LLNTHADKRPTAGQLLQVAWF 96
           LL  +  +RP   ++L+  W 
Sbjct: 241 LLKHNPSQRPMLREVLEHPWI 261

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 85.1 bits (210), Expect = 8e-20
 Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
            +    S D W+LG+++Y +     P   ++       I           C +I  P R 
Sbjct: 287 RTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRA 338

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEI 99
           L+   L    + R    Q ++   + ++
Sbjct: 339 LLEGFLRYPKEDRLLPLQAMETPEYEQL 366

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 83.4 bits (207), Expect = 9e-20
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+W  GVL Y  L G+ PF   S  ET   I   D  FPP     +S  +++LI +
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISK 245

Query: 76  LLNTHADKRPTAGQLLQVAWF 96
           LL  H  +R     +++  W 
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWV 266

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 82.4 bits (204), Expect = 3e-19
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               DM+SLG++ + ++                 +      FPP+   +     +++I  
Sbjct: 209 NEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 266

Query: 76  LLNTHADKRPTAGQLLQVAWF 96
           L++   +KRP A  LL   W 
Sbjct: 267 LIDHDPNKRPGARTLLNSGWL 287

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 81.6 bits (201), Expect = 1e-18
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 8/89 (8%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
            +    + D W+LG+ +Y +     P  D++       I           C +I  P R 
Sbjct: 291 PTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF--------RSCKNIPQPVRA 342

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIA 100
           L+   L    + R    Q ++   + ++ 
Sbjct: 343 LLEGFLRYPKEDRLLPLQAMETPEYEQLR 371

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
            GP  D+WSLGV+LY L+SG  PF  ++ +E R  +    Y  P     ++S     L+ 
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLK 246

Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           + L  +  KR T  Q+++  W 
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWI 268

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 79.3 bits (196), Expect = 6e-18
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 38/125 (30%)

Query: 6   LKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSP 37
           LKLID GS A                            G S  +WSLG+LLY ++ G  P
Sbjct: 189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248

Query: 38  FLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA 97
           F  + E      I      F       +S   + LI   L      RPT  ++    W  
Sbjct: 249 FEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298

Query: 98  EIAIP 102
           ++ +P
Sbjct: 299 DVLLP 303

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 79.1 bits (195), Expect = 1e-17
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 16  GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCG---HISVPARE 71
             S D++S+G + Y +LS G  PF D+   E  ++I    +S    +C     +   A +
Sbjct: 217 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATD 274

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
           LI Q+++    KRPTA ++L+   F
Sbjct: 275 LISQMIDHDPLKRPTAMKVLRHPLF 299

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 77.7 bits (192), Expect = 2e-17
 Identities = 31/119 (26%), Positives = 42/119 (35%), Gaps = 38/119 (31%)

Query: 6   LKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSP 37
            KLID GS A                                 +WSLG+LLY ++ G  P
Sbjct: 179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238

Query: 38  FLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
           F  + E      I  A+  FP     H+S     LI + L      RP+  ++L   W 
Sbjct: 239 FERDQE------ILEAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 78.3 bits (193), Expect = 2e-17
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 10  DLGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           D   +   + D++S G + Y ++S G  PF    + +    +          +  H  V 
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-KHEDVI 259

Query: 69  ARELIGQLLNTHADKRPTAGQLLQVAWF 96
           ARELI +++     KRP+A  +L+  +F
Sbjct: 260 ARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY LL G  PF DE        I    +  P     +++     L+ 
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243

Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
            +L     KR T   + +  WF
Sbjct: 244 HMLQVDPLKRATIKDIREHEWF 265

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 75.9 bits (187), Expect = 8e-17
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 8   LIDL--GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVADYSFPPEQCGH 64
           L  +         TD+WSLG +LY ++ G  P+    ++ ++ A       S P      
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP--R 271

Query: 65  ISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
            S    +L+  ++     +RP    LL      +   P 
Sbjct: 272 HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 75.4 bits (186), Expect = 1e-16
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS G++LY++L G  PF DE        ++   Y  P      +S  A+ LI 
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPD----FLSPGAQSLIR 240

Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           +++     +R T  ++ +  WF
Sbjct: 241 RMIVADPMQRITIQEIRRDPWF 262

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 75.5 bits (186), Expect = 1e-16
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 16/113 (14%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDE-SEEETRAHISVADYSFPPEQCG------- 63
            S  G   D+WSLG+ LY++   V PF  + S  E   +I   +  +P ++         
Sbjct: 226 SSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTN 285

Query: 64  --------HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
                    +S    + +   L  +  +R T+   L+  W A+  I +  + +
Sbjct: 286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFS 338

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 75.0 bits (185), Expect = 2e-16
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           +G   D+WS GV LY + +G+ PF  ++  +   +I    Y+ P         P  +L+ 
Sbjct: 190 SGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG----DCGPPLSDLLK 245

Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
            +L     KR +  Q+ Q +WF
Sbjct: 246 GMLEYEPAKRFSIRQIRQHSWF 267

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           AGP  D+WS GV+LY LL G  PF D+        I    +  P     +++     L+ 
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ----YLNPSVISLLK 248

Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
            +L     KR T   + +  WF
Sbjct: 249 HMLQVDPMKRATIKDIREHEWF 270

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 39/120 (32%)

Query: 6   LKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVS 36
           +KLID GS+A                             GP  +MWSLGV LY L+   +
Sbjct: 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228

Query: 37  PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 96
           PF +  E         A    P      +S     L+  LL    ++R T  +L+   W 
Sbjct: 229 PFCELEE------TVEAAIHPPY----LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 74.3 bits (183), Expect = 4e-16
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEE----TRAHISVADYSFPPEQCGHISVPAR 70
            G   D+WS GV LY++L G  PF D  E      T   I    YS P +    IS    
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECC 252

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWF 96
            LI ++       R +  ++   +WF
Sbjct: 253 HLISRIFVADPATRISIPEIKTHSWF 278

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 72.1 bits (177), Expect = 3e-15
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 8   LIDLGSSA--GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 65
           +IDL S+   G   D+W+LG +LY+L     PF    E+  +  I    YS PP      
Sbjct: 221 IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIPPHD--TQ 274

Query: 66  SVPARELIGQLLNTHADKRPTAGQLLQVAW 95
                 LI  +L  + ++R +  +++    
Sbjct: 275 YTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 71.1 bits (175), Expect = 3e-15
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
              +D+WSLG LLY L + + PF   S++E    I    +   P      S    E+I +
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---RYSDELNEIITR 250

Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +LN     RP+  ++L+     E
Sbjct: 251 MLNLKDYHRPSVEEILENPLILE 273

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 71.1 bits (175), Expect = 4e-15
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           +G + D+W++GV LY  + G  PF+DE      + I      FP +    I+   ++LI 
Sbjct: 217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP--DIAEDLKDLIT 274

Query: 75  QLLNTHADKRPTAGQLLQVAWF 96
           ++L+ + + R    ++    W 
Sbjct: 275 RMLDKNPESRIVVPEIKLHPWV 296

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVADYSFP-PEQCGHISVPARELI 73
            P +D+WSLG +LY +  G +PF     +      I   ++    P+         ++++
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVL 273

Query: 74  GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
              L     +R +  +LL   +      P N  
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQIQTHPVNQM 306

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR-AHISVADYSFPPEQCGHISVPARELI 73
                D+WS G++L  +L+G  P+   S+     +          P +   I      L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLALL 242

Query: 74  GQLLNTHADKRPTAGQLLQVAWF 96
            ++L  +   R T   + +  W+
Sbjct: 243 HKILVENPSARITIPDIKKDRWY 265

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 69.0 bits (169), Expect = 3e-14
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETR-AHISVADYSFP-PEQCGHISVPARELI 73
            P +D+WSLG +LY +  G +PF     + ++   I   ++    P+         ++++
Sbjct: 198 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVL 254

Query: 74  GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
              L     +R +  +LL   +      P N    
Sbjct: 255 KCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 289

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 69.1 bits (169), Expect = 4e-14
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-ISVADYSFP-PEQCGHISVPARELI 73
            P +D+WSLG +LY +  G +PF     + ++ H I   ++    P+         ++++
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVL 301

Query: 74  GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
              L     +R +  +LL   +      P N    
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAK 336

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 68.2 bits (167), Expect = 4e-14
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 19  TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLN 78
            D++SLG++L+ LL    PF  + E        V +  FPP            ++  +L+
Sbjct: 211 VDIFSLGLILFELLY---PFSTQMERVRTLTD-VRNLKFPPLFT-QKYPCEYVMVQDMLS 265

Query: 79  THADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
               +RP A  +++ A F ++  P  T + 
Sbjct: 266 PSPMERPEAINIIENAVFEDLDFPGKTVLR 295

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 68.0 bits (167), Expect = 5e-14
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
              SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP          AR
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKAR 260

Query: 71  ELIGQLLNTHADKRPTAGQLLQVA------WFAEI 99
           +L+ +LL   A KR    ++          +F  +
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 68.1 bits (167), Expect = 6e-14
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHISVADYSFPPEQCGHISVPARELI 73
                D+WS G++L  +L+G  P+   S+  +  +          P +   I      L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLALL 242

Query: 74  GQLLNTHADKRPTAGQLLQVAWF 96
            ++L  +   R T   + +  W+
Sbjct: 243 HKILVENPSARITIPDIKKDRWY 265

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
            +     +D+WSLG LLY + +  SPF  +          +    +PP    H S   R+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269

Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           L+   +N   +KRP    +  VA 
Sbjct: 270 LVNMCINPDPEKRPDVTYVYDVAK 293

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 66.2 bits (161), Expect = 4e-13
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I      G S D W+ GVLLY +L+G +PF  E E+E    I   + ++P      +S  
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKE 568

Query: 69  ARELIGQLLNTHADKR 84
           A  +   L+  H  KR
Sbjct: 569 AVAICKGLMTKHPGKR 584

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 65.5 bits (160), Expect = 5e-13
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
                  +D+W+LG +LY L +    F   S +     I    +        H S   R 
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL---HYSYDLRS 255

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAE 98
           L+ QL   +   RP+   +L+  + A+
Sbjct: 256 LVSQLFKRNPRDRPSVNSILEKGFIAK 282

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 65.3 bits (160), Expect = 7e-13
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I LG     S D WS GVLLY +L G SPF  + EEE    I + +  +P      +   
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR----WLEKE 244

Query: 69  ARELIGQLLNTHADKRPTAGQLLQV-AWFAEI 99
           A++L+ +L     +KR      ++    F EI
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 64.2 bits (157), Expect = 1e-12
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 68
           I      G S D W+ GVLLY +L+G +PF  E E+E    I   + ++P      +S  
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKE 247

Query: 69  ARELIGQLLNTHADKR 84
           A  +   L+  H  KR
Sbjct: 248 AVAICKGLMTKHPGKR 263

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D W+LGV  Y +  G +PF  +S  ET   I         P     +   AR+ I 
Sbjct: 248 GPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQ 307

Query: 75  QLLNTHADKRPTAGQLLQV---AWFAEI 99
           +LL    + R   G         +F  +
Sbjct: 308 RLL-CPPETRLGRGGAGDFRTHPFFFGL 334

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 63.2 bits (154), Expect = 4e-12
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIG 74
           GP  D WSLGV +Y +L G +PF  ES  ET   I      F  P Q   +S  A++LI 
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIR 318

Query: 75  QLLNTHADKRPTAGQLLQV---AWFAEI 99
           +L+    + R     +       +F+ I
Sbjct: 319 RLI-CSREHRLGQNGIEDFKKHPFFSGI 345

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           GP+ D W++GVLLY +L G +PF  E+E++    I   +  +P      +   A  ++  
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGILKS 257

Query: 76  LLNTHADKR 84
            +  +   R
Sbjct: 258 FMTKNPTMR 266

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 62.2 bits (152), Expect = 6e-12
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             S D WS GVL++ +L+G  PF  +  +ET   I  A    P      +S  A+ L+  
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 259

Query: 76  LLNTHADKR 84
           L   +   R
Sbjct: 260 LFKRNPANR 268

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 62.2 bits (152), Expect = 6e-12
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             + D WSLG L+Y +L+G  PF  E+ ++T   I     + PP    +++  AR+L+ +
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKK 254

Query: 76  LLNTHADKR 84
           LL  +A  R
Sbjct: 255 LLKRNAASR 263

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W LGV++Y ++ G  PF ++  E     I + +  FP      +S  A+ L+  
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAG 238

Query: 76  LLNTHADKR 84
           LL     +R
Sbjct: 239 LLKKDPKQR 247

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 62.0 bits (151), Expect = 9e-12
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 16  GPSTDMWSLGVLLYILLSGVS-PFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
           G + D++SLG+ +  +   +  P   E  ++ R          PPE    +S   R ++ 
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY------LPPEFTAGLSSELRSVLV 286

Query: 75  QLLNTHADKRPTAGQLLQVAWFAE 98
            +L      R TA  LL +    +
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQ 310

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 61.8 bits (151), Expect = 9e-12
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             S D WS G+L+Y +L+G +PF D +  +T   I  A+  FPP      +   ++L+ +
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLSR 236

Query: 76  LLNTHADKR-----PTAGQLLQVAWFAEI 99
           L+     +R          +    WF E+
Sbjct: 237 LITRDLSQRLGNLQNGTEDVKNHPWFKEV 265

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G   D+++LG++L  LL       + S+  T     + D               + L+ +
Sbjct: 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTD----LRDGIISD----IFDKKEKTLLQK 250

Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           LL+   + RP   ++L+     +
Sbjct: 251 LLSKKPEDRPNTSEILRTLTVWK 273

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
           G + D W LGV++Y ++ G  PF ++  E+    I + +  FP      +   A+ L+  
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSG 382

Query: 76  LLNTHADKR 84
           LL     +R
Sbjct: 383 LLKKDPKQR 391

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             + D W LG +LY +L G+ PF   +  E   +I        P    +I+  AR L+  
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP----NITNSARHLLEG 272

Query: 76  LLNTHADKR 84
           LL     KR
Sbjct: 273 LLQKDRTKR 281

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPF---LDESEEETRAHISVADYSFPPEQCGHISVPAREL 72
             + D WSLGV  Y LL G  P+      S +E          ++P       S     L
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS----AWSQEMVSL 250

Query: 73  IGQLLNTHADKR-PTAGQLLQVAWFAEI 99
           + +LL  + D+R      +    +  +I
Sbjct: 251 LKKLLEPNPDQRFSQLSDVQNFPYMNDI 278

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 60.2 bits (146), Expect = 3e-11
 Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 25/106 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI---------------------SVAD 54
           G + D+WS+GV  Y   +G  PF           +                        D
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260

Query: 55  YSFPPEQCGHISVPARE----LIGQLLNTHADKRPTAGQLLQVAWF 96
           +S        +S   +     ++  +L    +K     Q       
Sbjct: 261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             + D W+LGVL+Y + +G  PF  +   +    I      FP     H S   ++L+  
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRN 271

Query: 76  LLNTHADKR 84
           LL     KR
Sbjct: 272 LLQVDLTKR 280

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 60.1 bits (145), Expect = 5e-11
 Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 20/112 (17%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR----- 70
             + D WS G L +  ++G  PFL   +            +        ++   +     
Sbjct: 201 TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVL 260

Query: 71  ---------------ELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
                            +  +L  H  +R T  Q   V  F  +    + K+
Sbjct: 261 PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 59.5 bits (144), Expect = 5e-11
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRAHI--SVADYSFPPEQCGHISVPARELIGQLL 77
           D++SLG++L+ LL     F  + E   R  I   V +  FP             ++  +L
Sbjct: 258 DIFSLGLILFELLY---SFSTQME---RVRIITDVRNLKFPLL-FTQKYPQEHMMVQDML 310

Query: 78  NTHADKRPTAGQLLQVAWFAEI 99
           +    +RP A  +++ A F  +
Sbjct: 311 SPSPTERPEATDIIENAIFENL 332

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 8/100 (8%)

Query: 5   VLKLIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI--SVADYSFPPEQC 62
           VLK        G   D WS+GV LY +L G +PF  +S   T + I       +FP +  
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN- 298

Query: 63  GHISVPARELIGQLLNTHADKRPTAGQLLQV---AWFAEI 99
             IS  A+ LI   L T  + R     + ++    +F   
Sbjct: 299 -DISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLFFKND 336

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 57.9 bits (140), Expect = 3e-10
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             S D W+LG LLY +++G SPF    ++  R  +       P E     S  AR L  Q
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422

Query: 76  LLNTHADKR-----PTAGQLLQVAWFAEI 99
           LL     +R      +A ++ +   F ++
Sbjct: 423 LLCKDPAERLGCRGGSAREVKEHPLFKKL 451

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 57.4 bits (139), Expect = 4e-10
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 13/85 (15%)

Query: 9   IDLGSSAGPSTDMWSLGVLLYILLSGVSPFL---------DESEEETRAHISVADYSFPP 59
           I  G   G S D W+LGVL++ +++G SPF            +E+     I       P 
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283

Query: 60  EQCGHISVPARELIGQLLNTHADKR 84
                +SV A  ++   LN    +R
Sbjct: 284 ----SLSVKAASVLKSFLNKDPKER 304

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 56.9 bits (138), Expect = 4e-10
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFL---------DESEEETRAHISVADYSFPPEQCGHIS 66
           G S D W+LGVL++ +++G SPF            +E+     I       P      +S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 243

Query: 67  VPARELIGQLLNTHADKR 84
           V A  ++   LN    +R
Sbjct: 244 VKAASVLKSFLNKDPKER 261

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 56.9 bits (138), Expect = 6e-10
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 13/93 (13%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH----ISVADYSFPPEQCGHISVPARE 71
             + D WSLGVL+Y LL+G SPF  + E+ ++A     I  ++  +P      +S  A++
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ----EMSALAKD 295

Query: 72  LIGQLLNTHADKR----PT-AGQLLQVAWFAEI 99
           LI +LL     KR    P  A ++ +  +F +I
Sbjct: 296 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 55.7 bits (134), Expect = 2e-09
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 8   LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESE---EETRAHISVADYSFPPEQCGH 64
           ++  G +   S D +SLG +L+ LL G SPF         E            P      
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----S 416

Query: 65  ISVPARELIGQLLNTHADKR 84
            S   R L+  LL    ++R
Sbjct: 417 FSPELRSLLEGLLQRDVNRR 436

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH----ISVADYSFPPEQCGHIS 66
           LG     S D ++LGV LY +++   PF    E+         +     ++P       S
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD----KFS 417

Query: 67  VPARELIGQLLNTHADKR 84
             +++    LL    +KR
Sbjct: 418 PASKDFCEALLQKDPEKR 435

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 18/126 (14%), Positives = 34/126 (26%), Gaps = 29/126 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI---------------------SVAD 54
           G + D+WS+GV  Y   +G  PF           +                        D
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260

Query: 55  YSFPPEQCGHISVPARE----LIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCL 110
           +S        +S   +     ++  +L    +K     Q           I +   ++  
Sbjct: 261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD----ILHRMVIHVF 316

Query: 111 AWHQNQ 116
           +  Q  
Sbjct: 317 SLQQMT 322

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 17/92 (18%), Positives = 26/92 (28%), Gaps = 8/92 (8%)

Query: 2   NGAVLKLIDLG--SSAGPSTDMWSLGVLLYILLSGVSPFLDESEEET--RAHISVADYSF 57
           +G V  L        A P  D+  +G  LY LL    P  +         A    A    
Sbjct: 165 DGDV-VLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI 223

Query: 58  PPEQCGHISVPA--RELIGQLLNTHADKRPTA 87
            P       +P     +  + +      R  +
Sbjct: 224 EPADIDR-DIPFQISAVAARSVQGDGGIRSAS 254

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
            P  D+++L + +                +    I        P+    +S    EL+  
Sbjct: 209 LPKADIFALALTVVCAAGAEPLP---RNGDQWHEIRQGRLPRIPQ---VLSQEFTELLKV 262

Query: 76  LLNTHADKRPTAGQLLQ 92
           +++   ++RP+A  L++
Sbjct: 263 MIHPDPERRPSAMALVK 279

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416

 Score = 47.7 bits (114), Expect = 7e-07
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 15/108 (13%)

Query: 100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH 159
           ++  ++K N L W  N   IA   D+G L++   +    +   +               H
Sbjct: 63  SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSM----------ARFSNH 112

Query: 160 SGKVRAIIWNEQYEKL---TSSDETGLIIVWMLYKEKNPQDKLPPLML 204
           S  V+ + +N + + +     ++    I +W + K         PL  
Sbjct: 113 SSSVKTVKFNAKQDNVLASGGNNGE--IFIWDMNKCTESPSNYTPLTP 158

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
           V  + ++  Q   +A GG++G + +  ++   ES      +N              +V +
Sbjct: 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTES-----PSNYTPLTPGQSMSSVDEVIS 170

Query: 166 IIWNEQYEK-LTSSDETGLIIVW 187
           + WN+       S+  +    +W
Sbjct: 171 LAWNQSLAHVFASAGSSNFASIW 193

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 13/86 (15%)

Query: 107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
           V  LAW+Q+     A  G      +  L   KE          +L+      G   ++  
Sbjct: 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI--------HLSYTSPNSGIKQQLSV 219

Query: 166 IIWN--EQYEKLTSS--DETGLIIVW 187
           + W+        T++  D    I++W
Sbjct: 220 VEWHPKNSTRVATATGSDNDPSILIW 245

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 14/101 (13%), Positives = 38/101 (37%), Gaps = 15/101 (14%)

Query: 101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS 160
             ++ + +    H++   +A+   DG+L V  L +  +            A ++      
Sbjct: 167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ------------ASSRFPVDEE 214

Query: 161 GKVRAIIWNEQ-YEKLTSSDETGLIIVWMLYKEKNPQDKLP 200
            K++ + + +  Y  +   D+T  ++ + L K+        
Sbjct: 215 AKIKEVKFADNGYWMVVECDQT--VVCFDLRKDVGTLAYPT 253

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPPEQCGHISVPA 69
           G       D+WS   ++  +L+G  P+             I  ++     E     +   
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQY--FRGPLCLKI-ASEPPPIREIPPSCAPLT 286

Query: 70  RELIGQLLNTHADKRPTAGQLLQVAWFA 97
            + I + L      R +A +L +    A
Sbjct: 287 AQAIQEGLRKEPVHRASAMELRRKVGKA 314

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 28/124 (22%)

Query: 1   MNGAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSG 34
             G+V K+ DLG +                             S D+++ G+ +  + + 
Sbjct: 167 PTGSV-KIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATS 225

Query: 35  VSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA 94
             P+ +           V     P           +E+I   +  + D+R +   LL  A
Sbjct: 226 EYPYSECQNAAQIYRR-VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284

Query: 95  WFAE 98
           +F E
Sbjct: 285 FFQE 288

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
           +  + W  +   I A  G D  L V  L    E      A +    +     GH+ K+  
Sbjct: 324 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383

Query: 166 IIWNEQYEKL---TSSDETGLIIVW 187
             WN     +    S D    + VW
Sbjct: 384 FSWNPNEPWIICSVSEDNI--MQVW 406

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 19/94 (20%)

Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
           VNCL+++    +I A G  D  + +  L   K                 S + H  ++  
Sbjct: 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL-------------HSFESHKDEIFQ 326

Query: 166 IIWNEQYEKL---TSSDETGLIIVWMLYKEKNPQ 196
           + W+   E +   + +D    + VW L K    Q
Sbjct: 327 VQWSPHNETILASSGTDRR--LHVWDLSKIGEEQ 358

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430

 Score = 41.3 bits (97), Expect = 9e-05
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 15/84 (17%)

Query: 107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
           V  +AWH     +     DD  L +   DT   +T + +          ++  H+ +V  
Sbjct: 234 VEDVAWHLLHESLFGSVADDQKLMIW--DTRNNNTSKPS---------HTVDAHTAEVNC 282

Query: 166 IIWNEQYEKL--TSSDETGLIIVW 187
           + +N   E +  T S +   + +W
Sbjct: 283 LSFNPYSEFILATGSAD-KTVALW 305

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 98  EIAIPNNTKVNCLAWH-QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL 156
           EI I +  +VN   +  QN   IA       + V                  +L     L
Sbjct: 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDL----RL 177

Query: 157 QGHSGKVRAIIWNEQYEK-LTSSDETGLIIVW 187
           +GH  +   + WN      L S+ +   I +W
Sbjct: 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
               G + D+WSLG  +  + +G  PF  E  E   A   V  +   PE    +S  A+ 
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPF-YELGEPQAAMFKVGMFKVHPEIPESMSAEAKA 257

Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
            I +      DKR  A  LL   +
Sbjct: 258 FILKCFEPDPDKRACANDLLVDEF 281

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902

 Score = 44.5 bits (104), Expect = 1e-05
 Identities = 10/83 (12%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR 164
            K+  +    +  W+ +G  +G + V  +D  + S+ ++   +     +         + 
Sbjct: 99  GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL---DNLQKSSFFPAARLSPIV 155

Query: 165 AIIWNEQYEKLTSSDETGLIIVW 187
           +I WN +           + + +
Sbjct: 156 SIQWNPRDIGTVLISYEYVTLTY 178

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 10/77 (12%), Positives = 19/77 (24%), Gaps = 8/77 (10%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D + +   +Y +L G    +     E +                       E    
Sbjct: 263 NYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMW--------NEFFHV 314

Query: 76  LLNTHADKRPTAGQLLQ 92
           +LN        +  LL+
Sbjct: 315 MLNIPDCHHLPSLDLLR 331

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 20/134 (14%), Positives = 38/134 (28%), Gaps = 8/134 (5%)

Query: 73  IGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAV----GGDDGLL 128
           I    N     +P       V     + +P    ++ LA   +   ++          ++
Sbjct: 61  IFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120

Query: 129 KVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSDETGLIIVW 187
               + T      Q        A ++ L+   G V  + WN      +      G I V 
Sbjct: 121 AFFDVRTFSNEAKQQKR---PFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177

Query: 188 MLYKEKNPQDKLPP 201
            + +       LP 
Sbjct: 178 QVTETVKVCATLPS 191

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 16/81 (19%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V  + W  +  +++VG  +GL+ +  +++  +               +++ GH  +V  +
Sbjct: 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTK--------------LRTMAGHQARVGCL 182

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            WN     L+S   +G I   
Sbjct: 183 SWNRHV--LSSGSRSGAIHHH 201

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.8 bits (99), Expect = 5e-05
 Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 23/112 (20%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVAD 54
           L S+     DMWS+G +   +      F   SE +    I                S+  
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 251

Query: 55  YSFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
            +FPP            +     +L+ ++L  +  KR +A + LQ ++  + 
Sbjct: 252 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 18/83 (21%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V    +   + WI VG DD  ++V   +TG++                  + H   +R+I
Sbjct: 58  VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK--------------VVDFEAHPDYIRSI 103

Query: 167 IWNEQYEKLTSS--DETGLIIVW 187
             +     + S   D T  + +W
Sbjct: 104 AVHPTKPYVLSGSDDLT--VKLW 124

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 18/84 (21%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           +  +A H  + ++  G DD  +K+   +                 + Q+ +GH   V  +
Sbjct: 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA-------------LEQTFEGHEHFVMCV 146

Query: 167 IWNEQYEKL---TSSDETGLIIVW 187
            +N +          D T  + VW
Sbjct: 147 AFNPKDPSTFASGCLDRT--VKVW 168

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345

 Score = 41.4 bits (98), Expect = 9e-05
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           +  +AW Q  G +A    D  ++V + D   +      +           Q HS  V  +
Sbjct: 255 IYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTA-----HLHQAHSQDVNCV 309

Query: 167 IWNEQYEKL---TSSDETGLIIVW 187
            WN +   L    S D    +  W
Sbjct: 310 AWNPKEPGLLASCSDDGE--VAFW 331

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345

 Score = 38.7 bits (91), Expect = 8e-04
 Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 11/65 (16%)

Query: 104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
           +++   LAW+     +A  G D  +++   +               +  +   +GH   V
Sbjct: 16  DSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-----------ICKSVLSEGHQRTV 64

Query: 164 RAIIW 168
           R + W
Sbjct: 65  RKVAW 69

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 41.4 bits (98), Expect = 9e-05
 Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 23/115 (20%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVAD 54
           L SS     D+WS+G +   +      F   S+ +    I                ++  
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251

Query: 55  YSFPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            +F         +    I    ++L+ + L  +  KR +A   L   +F ++   
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 15/83 (18%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           +  +A+  N  ++        +    +    E           LA   S   H+ KV  +
Sbjct: 494 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFE-----------LAHTNSWTFHTAKVACV 542

Query: 167 IWNEQYEKL--TSSDETGLIIVW 187
            W+    +L   S D +  +IVW
Sbjct: 543 SWSPDNVRLATGSLDNS--VIVW 563

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 17/83 (20%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
            +C+A   ++ ++AVGG D  + V KL     S  +                H  ++ ++
Sbjct: 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK-------------TIVHPAEITSV 497

Query: 167 IW--NEQYEKLTSSDETGLIIVW 187
            +  N  +  L ++D++  +I +
Sbjct: 498 AFSNNGAF--LVATDQSRKVIPY 518

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 20  DMWSLGVLLYILLSGVSPFLDESEEETRA--HISVADYSFPPEQCGHISVPARELIGQLL 77
           D+WSLG+    L  G  P  +      +    I   +   PP   G+ S P +E +   L
Sbjct: 201 DIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNN---PPTLEGNYSKPLKEFVEACL 255

Query: 78  NTHADKRPTAGQLLQVAWFAEIAIPNN 104
           N     RPTA +LL+  +    A   +
Sbjct: 256 NKEPSFRPTAKELLKHKFILRNAKKTS 282

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 13/88 (14%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA------DYSFPPEQCGHI 65
           G S    +D++SLG +LY +L+G  PF  +S       +SVA      D   P  +   +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIPPSARHEGL 246

Query: 66  SVPARELIGQLLNTHADKRP-TAGQLLQ 92
           S     ++ + L  + + R  TA ++  
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRA 274

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG--QVAAANVNLAMNQSLQGHSG 161
           ++ V  +    N    AV   DG + VLK++  ++ +    +    +     ++   +  
Sbjct: 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEY 170

Query: 162 KVRAIIWN-EQYEKLTSSDETGLIIVW 187
            VR   +  E+   L +      +I++
Sbjct: 171 AVRMRAFVNEEKSLLVALTNLSRVIIF 197

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 11/98 (11%)

Query: 107 VNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA 165
           +  L    ++   IA    D  L V  +D   ++  ++          +     S +  A
Sbjct: 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKL----------RKRFCFSKRPNA 154

Query: 166 IIWNEQYEKLTSSDETGLIIVWMLYKEKNPQDKLPPLM 203
           I   E    +  +D+ G +    +      +    P++
Sbjct: 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL 192

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 16/83 (19%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V C A+  +  +IA    D  +K+    TGK                 +   HS +V   
Sbjct: 660 VLCCAFSSDDSYIATCSADKKVKIWDSATGKL--------------VHTYDEHSEQVNCC 705

Query: 167 IW--NEQYEKLTSSDETGLIIVW 187
            +     +  L +      + +W
Sbjct: 706 HFTNKSNHLLLATGSNDFFLKLW 728

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 1/81 (1%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           VN   +  +   +A    DG L++  + +  E    +      L+     +     V+  
Sbjct: 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANE-RKSINVKRFFLSSEDPPEDVEVIVKCC 804

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            W+   +K+  + +  +++  
Sbjct: 805 SWSADGDKIIVAAKNKVLLFD 825

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 107  VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
            V+C     +  ++A G +DG +K+++L   +                 S  GH   VR I
Sbjct: 964  VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF--------------SSGVGHKKAVRHI 1009

Query: 167  IWNEQYEKLTSSDETGLIIVW 187
             +    + L SS E  +I VW
Sbjct: 1010 QFTADGKTLISSSEDSVIQVW 1030

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 23/90 (25%)

Query: 107 VNCLAWHQNQGW---IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV 163
             CL+W  ++     +AV   +  +   +   GK                  L GH   +
Sbjct: 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK------------LPGHKSLI 217

Query: 164 RAIIW--NEQYEKLT----SSDETGLIIVW 187
           R+I W  +             D    I ++
Sbjct: 218 RSISWAPSIGRWYQLIATGCKDGR--IRIF 245

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 28/122 (22%)

Query: 11  LGSSA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS------------------ 51
           +G +  GP  D+W++G +   LLSGV  +  +S+ +    I                   
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234

Query: 52  -VADYSFPPEQCG--------HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
             +    P  +          +IS PA  L+   L+    +R T  QLL   +F  I   
Sbjct: 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI 294

Query: 103 NN 104
            +
Sbjct: 295 ED 296

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS 51
            S A    D+++L  +LY  L+G  P+  +      AHI+
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	205
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.9
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.9
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.89
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.88
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.87
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.85
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.85
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.85
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.84
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.84
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.84
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.84
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.83
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.83
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.83
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.83
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.83
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.82
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.82
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.82
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.82
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.82
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.82
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.81
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.81
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.81
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.81
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.81
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.81
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.81
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.81
3niz_A	311	Rhodanese family protein; structural genomics, str	99.81
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.81
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.81
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.81
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.81
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.81
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.8
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.8
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.8
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.8
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.8
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.8
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.8
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.8
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.8
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.8
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.8
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.8
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.8
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.8
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.79
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.79
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.79
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.79
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.79
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.79
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.79
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.79
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.79
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.79
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.78
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.78
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.78
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.78
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.78
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.78
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.78
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.78
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.78
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.78
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.78
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.78
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.77
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.77
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.77
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.77
3bhy_A	283	Death-associated protein kinase 3; death associate	99.77
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.77
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.77
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.77
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.77
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.77
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.76
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.76
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.76
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.75
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.75
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.75
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.75
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.75
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.75
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.75
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.75
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.75
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.75
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.75
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.74
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.74
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.74
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.74
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.74
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.74
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.74
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.74
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.74
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.74
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.74
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.74
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.73
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.73
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.73
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.73
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.72
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.72
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.72
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.72
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.72
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.71
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.71
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.71
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.71
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.71
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.7
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.7
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.7
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.7
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.7
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.69
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.69
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.68
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.68
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.68
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.68
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.68
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.67
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.67
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.67
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.67
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.67
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.67
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.66
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.66
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.66
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.66
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.66
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.66
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.66
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.66
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.66
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.65
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.65
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.65
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.65
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.65
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.65
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.65
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.65
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.65
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.65
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.65
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.65
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.64
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.64
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.64
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.64
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.64
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.64
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.64
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.64
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.64
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.64
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.63
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.63
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.63
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.63
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.62
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.62
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.62
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.62
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.62
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.62
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.62
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.62
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.62
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.61
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.61
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.61
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.61
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.6
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.6
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.6
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.6
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.59
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.59
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.59
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.58
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.58
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.58
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.57
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.56
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.56
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.56
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.55
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.55
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.54
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.54
2pm7_B	297	Protein transport protein SEC13, protein transport	99.54
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.53
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.53
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.52
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.52
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.52
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.52
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.51
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.51
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.51
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.51
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.5
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.5
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.5
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.49
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.49
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.49
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.48
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.48
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.48
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.48
3uqc_A	286	Probable conserved transmembrane protein; structur	99.47
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.47
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.47
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.46
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.46
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.46
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.46
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.46
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.46
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.45
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.45
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.45
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.45
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.44
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.44
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.44
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.44
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.44
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.43
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.42
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.42
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.41
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.41
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.41
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.4
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.4
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.39
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.39
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.39
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.39
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.39
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.39
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.38
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.38
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.38
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.37
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.37
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.36
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.36
2pm7_B	297	Protein transport protein SEC13, protein transport	99.36
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.36
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.35
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.35
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.35
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.35
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.35
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.35
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.34
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.33
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.33
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.32
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.31
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.3
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.3
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.29
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.29
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.29
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.28
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.28
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.28
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.27
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.27
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.27
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.27
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.27
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.26
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.26
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.26
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.26
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.26
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.25
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.25
3jro_A	753	Fusion protein of protein transport protein SEC13	99.24
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.24
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.23
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.23
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.22
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.22
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.21
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.21
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.21
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.2
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.2
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.2
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.19
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.19
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.19
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.19
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.18
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.18
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.18
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.18
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.18
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.17
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.17
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.17
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.17
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.16
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.16
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.15
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.15
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.14
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.14
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.14
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.12
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.11
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.11
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.09
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.08
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.08
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.07
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.05
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.04
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.04
3jro_A	753	Fusion protein of protein transport protein SEC13	99.02
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.01
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	98.89
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	98.88
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	98.82
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	98.77
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	98.76
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	98.74
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	98.68
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	98.62
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.57
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	98.57
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	98.56
1k32_A	1045	Tricorn protease; protein degradation, substrate g	98.52
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	98.49
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	98.42
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	98.38
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	98.32
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	98.32
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	98.32
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	98.29
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	98.25
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.22
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	98.2
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.2
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	98.16
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	98.15
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	98.15
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	98.14
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	98.12
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	98.07
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	98.06
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	98.04
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	98.04
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	98.03
1k32_A	1045	Tricorn protease; protein degradation, substrate g	97.98
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	97.97
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	97.95
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	97.94
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	97.94
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	97.92
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	97.9
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	97.88
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	97.86
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	97.82
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	97.8
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	97.79
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	97.78
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	97.75
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	97.75
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	97.72
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	97.72
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	97.66
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	97.64
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	97.59
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	97.52
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	97.42
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	97.34
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	97.34
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	97.33
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	97.31
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	97.18
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	97.09
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	97.06
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.04
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	96.97
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	96.96
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	96.95
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	96.9
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	96.88
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	96.88
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	96.87
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	96.87
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	96.79
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	96.74
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	96.64
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	96.58
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	96.31
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	96.29
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	96.18
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	96.11
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	96.1
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	96.02
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	95.96
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	95.94
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	95.81
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	95.74
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	95.61
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	95.33
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	95.11
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	95.11
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	95.1
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	94.67
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	94.52
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	94.34
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	94.31
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	94.31
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	94.29
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	94.21
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	94.14
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	93.68
2qe8_A	343	Uncharacterized protein; structural genomics, join	93.61
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.47
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	93.42
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	93.25
2qe8_A	343	Uncharacterized protein; structural genomics, join	93.18
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	92.56
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	92.53
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	92.09
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	91.65
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	91.18
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	90.17
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	88.89
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	88.33
2p4o_A	306	Hypothetical protein; putative lactonase, structur	87.97
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	82.64
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	80.94
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	80.84

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=4.7e-26  Score=173.45  Aligned_cols=96  Identities=29%  Similarity=0.554  Sum_probs=87.6

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      ++|++||+|||+|                               |+.++||||+||++|||++|++||.+.+..+++.+|
T Consensus       167 ~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i  246 (311)
T 4aw0_A          167 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI  246 (311)
T ss_dssp             TTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            4789999999998                               489999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc------cccchhhhccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL------LQVAWFAEIAI  101 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~------l~~~~~~~~~~  101 (205)
                      .+..+.+|.    .+++++++||.+||++||++|+++.++      ++||||..+.+
T Consensus       247 ~~~~~~~p~----~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          247 IKLEYDFPE----KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             HHTCCCCCT----TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HcCCCCCCc----ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence            999887775    689999999999999999999999884      78899877654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=8.8e-26  Score=171.79  Aligned_cols=95  Identities=31%  Similarity=0.527  Sum_probs=87.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||+|                             |+.++||||+||++|||++|++||.+.+..+++..|.+
T Consensus       161 ~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  240 (304)
T 3ubd_A          161 EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK  240 (304)
T ss_dssp             TTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence            4689999999998                             49999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~  100 (205)
                      ..+.+|.    .+++++++||.+||++||++|+++     +++++||||..+.
T Consensus       241 ~~~~~p~----~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          241 AKLGMPQ----FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCCC----cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            8877664    689999999999999999999985     6899999998764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=1.4e-25  Score=173.18  Aligned_cols=98  Identities=24%  Similarity=0.450  Sum_probs=86.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++|++||+|||+|                             |+.++||||+||++|||++|++||.+.+..+.+..|..
T Consensus       205 ~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~  284 (346)
T 4fih_A          205 HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD  284 (346)
T ss_dssp             TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence            4789999999998                             59999999999999999999999999999999988887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .... ....+..+++++++||.+||++||++|+++.++++||||.+..
T Consensus       285 ~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          285 NLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             SSCC-CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCCC-CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence            5432 2223446899999999999999999999999999999998654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=1.1e-25  Score=169.10  Aligned_cols=93  Identities=34%  Similarity=0.552  Sum_probs=85.5

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++|++||+|||+|.                             +.++||||+||++|+|++|++||.+.+..+++..|..
T Consensus       147 ~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~  226 (275)
T 3hyh_A          147 EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN  226 (275)
T ss_dssp             TTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            46899999999992                             5789999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.+.+|.    .+++++++||.+||++||++||++.++++||||+.
T Consensus       227 ~~~~~p~----~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          227 GVYTLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             TCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             CCCCCCC----CCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            8877764    68999999999999999999999999999999964

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=2.5e-25  Score=172.03  Aligned_cols=95  Identities=24%  Similarity=0.396  Sum_probs=85.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++|.+||+|||+|                             |+.++|||||||++|||++|++||.+.+..+++.+|.+
T Consensus       160 ~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  239 (350)
T 4b9d_A          160 KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS  239 (350)
T ss_dssp             TTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence            4689999999999                             48999999999999999999999999999999999988


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.++..   +..+++++++||.+||++||++||++.++++|||+...
T Consensus       240 ~~~~~~---~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          240 GSFPPV---SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             TCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             CCCCCC---CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            765322   34689999999999999999999999999999999653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=8.2e-25  Score=172.89  Aligned_cols=98  Identities=24%  Similarity=0.450  Sum_probs=86.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||+|                             |+.++|||||||++|||++|++||.+.+..+.+..|..
T Consensus       282 ~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~  361 (423)
T 4fie_A          282 HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD  361 (423)
T ss_dssp             TTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence            4689999999998                             59999999999999999999999999999999998887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .... ....+..+++++++||.+||++||++|+++.++++||||....
T Consensus       362 ~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          362 NLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             SCCC-CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCCC-CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence            6432 2233457899999999999999999999999999999998753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.91  E-value=8.9e-25  Score=165.40  Aligned_cols=94  Identities=19%  Similarity=0.301  Sum_probs=78.1

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i~~~~~   55 (205)
                      +|.+||+|||+|                          |+.++||||+||++|||++|++||.+.+. .++...+..+..
T Consensus       168 ~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~  247 (290)
T 3fpq_A          168 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK  247 (290)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC
T ss_pred             CCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC
Confidence            689999999999                          48999999999999999999999987544 445555555433


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                        |.......++++++||.+||++||++||++.++++||||++
T Consensus       248 --~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          248 --PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             --CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             --CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence              22233467899999999999999999999999999999965

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.90  E-value=8.5e-24  Score=166.81  Aligned_cols=102  Identities=21%  Similarity=0.280  Sum_probs=85.0

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .+|.+||+|||+|                                  |+.++||||+||++|||++|++||.+.+..+++
T Consensus       193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l  272 (398)
T 4b99_A          193 ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL  272 (398)
T ss_dssp             TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH
T ss_pred             CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHH
Confidence            4689999999998                                  278999999999999999999999999999888


Q ss_pred             HHHHhCCCCCCCC---------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADYSFPPE---------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..|.......+..                           ....+++++++||.+||.+||.+|+++.++++||||....
T Consensus       273 ~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          273 QLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             HHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            8886533222111                           1235789999999999999999999999999999998765


Q ss_pred             cCC
Q psy14043        101 IPN  103 (205)
Q Consensus       101 ~~~  103 (205)
                      .+.
T Consensus       353 ~p~  355 (398)
T 4b99_A          353 DPD  355 (398)
T ss_dssp             CGG
T ss_pred             CCc
Confidence            433

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.90  E-value=7.9e-24  Score=174.22  Aligned_cols=100  Identities=39%  Similarity=0.629  Sum_probs=92.3

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .+.+||+|||+|                            |+.++||||+||++|||++|.+||.+.+..+++..|....
T Consensus       293 ~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~  372 (573)
T 3uto_A          293 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD  372 (573)
T ss_dssp             CCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC
T ss_pred             CCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCC
Confidence            478999999999                            4889999999999999999999999999999999999998


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      +.++...+..+++++++||.+||++||.+|+++.++++||||.....+
T Consensus       373 ~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          373 WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred             CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence            888877778899999999999999999999999999999999765443

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.89  E-value=1.1e-23  Score=162.25  Aligned_cols=86  Identities=19%  Similarity=0.244  Sum_probs=72.0

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc----
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL----   90 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~----   90 (205)
                      |+.++||||+||++|||++|++||.+.+..+++..|....+++. ..+..+++++++||.+||++||.+||++.|+    
T Consensus       233 y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l  311 (336)
T 4g3f_A          233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKV  311 (336)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence            48999999999999999999999998887778888887665332 2345799999999999999999999999986    


Q ss_pred             ---------cccchhhhccc
Q psy14043         91 ---------LQVAWFAEIAI  101 (205)
Q Consensus        91 ---------l~~~~~~~~~~  101 (205)
                               ++|||+.....
T Consensus       312 ~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          312 GKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             HHHHHHTTSSCSCSSSSCCC
T ss_pred             HHHHhhhhhccCCCcCCCCC
Confidence                     56788766543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.88  E-value=1.6e-22  Score=157.89  Aligned_cols=85  Identities=31%  Similarity=0.459  Sum_probs=64.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhC--------------------------------------CCC
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVA--------------------------------------DYS   56 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~i~~~--------------------------------------~~~   56 (205)
                      +.++||||+||++|||++|++||.. .+..+++..|...                                      ...
T Consensus       225 ~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  304 (361)
T 4f9c_A          225 TTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSS  304 (361)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----
T ss_pred             CCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccc
Confidence            7889999999999999999999964 4454555544320                                      000


Q ss_pred             ------------CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         57 ------------FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        57 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                                  .....+..++++++|||.+||++||.+|+++.|+++||||+++.
T Consensus       305 ~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          305 TPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             -----------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             ccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence                        00122346899999999999999999999999999999998753

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.87  E-value=2.1e-22  Score=166.47  Aligned_cols=96  Identities=26%  Similarity=0.430  Sum_probs=82.9

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE---SEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~---~~~~~~~~i   50 (205)
                      .+|++||+|||+|                            |+.++|||||||++|||++|.+||.+.   ...++...+
T Consensus       327 ~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i  406 (689)
T 3v5w_A          327 EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT  406 (689)
T ss_dssp             TTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH
T ss_pred             CCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Confidence            4789999999999                            488999999999999999999999753   445667777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIAI  101 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~~  101 (205)
                      ....+.+|.    .+++++++||.+||++||.+|++     +.++++||||..+.+
T Consensus       407 ~~~~~~~p~----~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          407 LTMAVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             HHCCCCCCT----TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             cCCCCCCCc----cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCH
Confidence            777766664    68999999999999999999998     589999999987643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.85  E-value=1.4e-21  Score=149.02  Aligned_cols=93  Identities=20%  Similarity=0.393  Sum_probs=74.2

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++++||+|||+|                                  |+.++|||||||++|||+||++||.+.+.....
T Consensus       167 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~  246 (307)
T 3omv_A          167 EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI  246 (307)
T ss_dssp             TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred             CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHH
Confidence            4689999999998                                  266899999999999999999999987665554


Q ss_pred             HHHHhCCCCCC--CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         48 AHISVADYSFP--PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        48 ~~i~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ..+.......|  ...+.++++++++|+.+||+.+|++||++.+++++.
T Consensus       247 ~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L  295 (307)
T 3omv_A          247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI  295 (307)
T ss_dssp             HHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred             HHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            44443332222  234457899999999999999999999999887653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.85  E-value=1.2e-21  Score=148.97  Aligned_cols=93  Identities=20%  Similarity=0.308  Sum_probs=80.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++++||+|||+|                               |+.++||||+||++|||+| |++||.+.+..+++..
T Consensus       163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~  242 (299)
T 4asz_A          163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC  242 (299)
T ss_dssp             GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            3578999999999                               4999999999999999998 9999999999999999


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.++.....   +..+++++++|+.+||+.+|++||++.++  +.++..+
T Consensus       243 i~~~~~~~~---p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~~  287 (299)
T 4asz_A          243 ITQGRVLQR---PRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNL  287 (299)
T ss_dssp             HHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHHH
T ss_pred             HHcCCCCCC---CccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHHH
Confidence            988764322   23689999999999999999999999998  4566543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.85  E-value=2.6e-21  Score=150.75  Aligned_cols=95  Identities=28%  Similarity=0.543  Sum_probs=87.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++|||||||++|||++|.+||.+.+..+++..|..
T Consensus       159 ~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  238 (353)
T 3txo_A          159 HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN  238 (353)
T ss_dssp             TTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            4689999999987                             37899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc------ccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA------GQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------~~~l~~~~~~~~~  100 (205)
                      ....+|.    .+++++++||.+||+++|.+|+++      .++++||||..+.
T Consensus       239 ~~~~~p~----~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          239 DEVVYPT----WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            8887775    589999999999999999999998      7899999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=2.5e-21  Score=155.07  Aligned_cols=97  Identities=36%  Similarity=0.717  Sum_probs=90.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             |+.++||||+||++|+|++|.+||.+.+..+....+..
T Consensus       148 ~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  227 (444)
T 3soa_A          148 KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA  227 (444)
T ss_dssp             TTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence            3578999999988                             37889999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.+.++...+..+++++++||.+||+.||.+||++.++++|||+..
T Consensus       228 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          228 GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             TCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             CCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            9988888878889999999999999999999999999999999964

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.84  E-value=3e-21  Score=147.42  Aligned_cols=89  Identities=21%  Similarity=0.300  Sum_probs=77.9

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++++||+|||+|                               |+.++||||+||++|||+| |.+||.+.+..++...
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~  259 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM  259 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred             CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3578999999998                               4999999999999999998 8999999999999998


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      |..+....   .+..+++++++|+.+||+.+|++||++.+++++
T Consensus       260 i~~~~~~~---~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          260 IRNRQVLP---CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            88765422   224689999999999999999999999998764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.84  E-value=4.6e-21  Score=147.69  Aligned_cols=89  Identities=20%  Similarity=0.320  Sum_probs=76.0

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++++||+|||+|                               |+.++|||||||++|||+| |+.||.+.+..+.+..
T Consensus       193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~  272 (329)
T 4aoj_A          193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC  272 (329)
T ss_dssp             TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH
T ss_pred             CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            4689999999998                               4899999999999999999 9999999999999888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      |.++....   .+..+++++++|+.+||+.+|++||++.+++++
T Consensus       273 i~~g~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          273 ITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHTCCCC---CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHcCCCCC---CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            88764321   223689999999999999999999999998764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.84  E-value=3.3e-21  Score=150.62  Aligned_cols=95  Identities=41%  Similarity=0.707  Sum_probs=87.8

Q ss_pred             eEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          5 VLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         5 ~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      .+||+|||++                            |+.++||||+||++|+|++|.+||.+.+..+.+..|....+.
T Consensus       157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  236 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD  236 (361)
T ss_dssp             CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence            7999999988                            377899999999999999999999999999999999998888


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ++...+..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       237 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            7766667899999999999999999999999999999999754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.84  E-value=4.9e-21  Score=149.75  Aligned_cols=96  Identities=38%  Similarity=0.710  Sum_probs=88.5

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||++                            |+.++||||+||++|+|++|.+||.+.+..+....+..+.
T Consensus       167 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~  246 (362)
T 2bdw_A          167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA  246 (362)
T ss_dssp             TCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            357999999988                            3778999999999999999999999999999999999988


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.++...+..+++++++||.+||..+|.+||++.++++|||+..
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          247 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            88887777789999999999999999999999999999999964

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.84  E-value=8.7e-21  Score=147.39  Aligned_cols=95  Identities=33%  Similarity=0.522  Sum_probs=86.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++||||+||++|||++|.+||.+.+..+++..|..
T Consensus       153 ~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  232 (345)
T 1xjd_A          153 KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM  232 (345)
T ss_dssp             TTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            4689999999987                             37889999999999999999999999999999999988


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc-cccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG-QLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~l~~~~~~~~~  100 (205)
                      ....+|.    .+++++++||.+||..+|.+|+++. ++++||||..+.
T Consensus       233 ~~~~~p~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          233 DNPFYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCCCCCc----ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            8776664    6899999999999999999999998 999999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=7.7e-21  Score=146.74  Aligned_cols=95  Identities=33%  Similarity=0.560  Sum_probs=86.1

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++.                             +.++||||+||++|+|++|++||.+.+..+....+..
T Consensus       149 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  228 (328)
T 3fe3_A          149 ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR  228 (328)
T ss_dssp             TTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            46789999999882                             4789999999999999999999999999999999998


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +.+..|.    .+++++.+||.+||..||.+||++.++++|||+....
T Consensus       229 ~~~~~p~----~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          229 GKYRIPF----YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             CCCCCCC----CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            8887765    5899999999999999999999999999999997643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.4e-21  Score=149.11  Aligned_cols=97  Identities=37%  Similarity=0.710  Sum_probs=89.4

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||++                            ++.++||||+||++|+|++|.+||.+.+..+....+....
T Consensus       140 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  219 (321)
T 1tki_A          140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE  219 (321)
T ss_dssp             CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCC
Confidence            688999999998                            2789999999999999999999999999999999999888


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.++...+..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            877766667899999999999999999999999999999999764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.83  E-value=1.2e-20  Score=146.21  Aligned_cols=95  Identities=27%  Similarity=0.554  Sum_probs=86.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|.+||+|||++                             |+.++|||||||++|||++|.+||.+.+..+....+..
T Consensus       140 ~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  219 (337)
T 1o6l_A          140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            4689999999987                             37889999999999999999999999999889999988


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....+|.    .+++++++||.+||+.+|.+|+     ++.++++||||..+.
T Consensus       220 ~~~~~p~----~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            8777665    6899999999999999999999     899999999997654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.83  E-value=1.6e-20  Score=148.00  Aligned_cols=98  Identities=36%  Similarity=0.626  Sum_probs=88.9

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||++                            ++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus       187 ~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~  266 (387)
T 1kob_A          187 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD  266 (387)
T ss_dssp             CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC
T ss_pred             CCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            467999999998                            3788999999999999999999999999988999998887


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..++...+..+++++++||.+||..+|.+||++.++++|||+....
T Consensus       267 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          267 WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             CCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            7777766778999999999999999999999999999999997643

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.83  E-value=1.6e-20  Score=144.40  Aligned_cols=96  Identities=28%  Similarity=0.602  Sum_probs=86.6

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .+|.+||+|||++                          |+.++|||||||++|||++|.+||.+.+..+.+..|.....
T Consensus       141 ~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  220 (318)
T 1fot_A          141 KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL  220 (318)
T ss_dssp             TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC
T ss_pred             CCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            4689999999988                          37889999999999999999999999999999999998877


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhccc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIAI  101 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~~  101 (205)
                      .+|.    .++++++++|.+||..+|.+|+     ++.++++||||..+.+
T Consensus       221 ~~p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          221 RFPP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             CCCT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             CCCC----CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCH
Confidence            7665    6899999999999999999999     8899999999976543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.83  E-value=1.1e-20  Score=148.38  Aligned_cols=97  Identities=36%  Similarity=0.639  Sum_probs=88.3

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||++                            ++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus       225 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~  304 (373)
T 2x4f_A          225 AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR  304 (373)
T ss_dssp             TTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             CCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence            578999999988                            2678999999999999999999999999999999998887


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..++...+..+++++++||.+||+.+|.+||++.++++||||...
T Consensus       305 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          305 WDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             CCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             CCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            777766667899999999999999999999999999999999764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.83  E-value=1.6e-20  Score=146.37  Aligned_cols=96  Identities=31%  Similarity=0.523  Sum_probs=86.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++|||||||++|||++|++||.+.+..+++..|..
T Consensus       156 ~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  235 (353)
T 2i0e_A          156 SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME  235 (353)
T ss_dssp             TTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            4689999999987                             37789999999999999999999999999999999998


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~~  101 (205)
                      ....+|.    .+++++++||.+||.++|.+|++     +.++++||||..+.+
T Consensus       236 ~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          236 HNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             CCCCCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence            8777765    68999999999999999999995     489999999976543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=1.7e-20  Score=152.27  Aligned_cols=97  Identities=33%  Similarity=0.659  Sum_probs=90.0

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++                           |+.++||||+||++|+|++|.+||.+.+..+....+..+.+
T Consensus       175 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  254 (494)
T 3lij_A          175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY  254 (494)
T ss_dssp             TCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            466999999988                           37899999999999999999999999999999999999988


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .++...+..+++++++||.+||+.+|.+||++.++++|||+...
T Consensus       255 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          255 TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             CCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             CCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            88887788899999999999999999999999999999999754

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.82  E-value=3.9e-21  Score=149.29  Aligned_cols=89  Identities=24%  Similarity=0.356  Sum_probs=73.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCH-HHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESE-EETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~-~~~~~   48 (205)
                      +++++||+|||+|                               |+.++||||+||++|||+| |++||.+.+. .....
T Consensus       220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~  299 (353)
T 4ase_A          220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  299 (353)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3688999999998                               4999999999999999998 9999988654 44555


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+..+... +  .+..+++++++++.+||+.||++||++.++++|
T Consensus       300 ~i~~g~~~-~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          300 RLKEGTRM-R--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHTCCC-C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCC-C--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            55554322 1  123689999999999999999999999999987

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=1.5e-20  Score=145.85  Aligned_cols=96  Identities=30%  Similarity=0.612  Sum_probs=85.6

Q ss_pred             CeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCC---CCHHHHHHHHH
Q psy14043          4 AVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLD---ESEEETRAHIS   51 (205)
Q Consensus         4 ~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~---~~~~~~~~~i~   51 (205)
                      +.+||+|||++                             |+.++||||+||++|+|++|.+||.+   .+..+++..+.
T Consensus       157 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~  236 (342)
T 2qr7_A          157 ESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG  236 (342)
T ss_dssp             GGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH
T ss_pred             CeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc
Confidence            45999999988                             26789999999999999999999975   46677888998


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+.+.++...+..+++++++||.+||..||++||++.++++|||+...
T Consensus       237 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          237 SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             cCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            888887777777899999999999999999999999999999999653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.82  E-value=8.2e-21  Score=153.73  Aligned_cols=98  Identities=33%  Similarity=0.565  Sum_probs=90.3

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++                           |+.++||||+||++|+|++|.+||.+.+..+.+..+..+.+
T Consensus       165 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  244 (484)
T 3nyv_A          165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY  244 (484)
T ss_dssp             TCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CCcEEEEeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            578999999977                           37899999999999999999999999999999999999988


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .++.+.+..+++++++||.+||+.+|.+||++.++++|||+....
T Consensus       245 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          245 TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            877777778999999999999999999999999999999997653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.82  E-value=2.9e-20  Score=144.74  Aligned_cols=95  Identities=26%  Similarity=0.538  Sum_probs=86.5

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .+|.+||+|||++                          |+.++|||||||++|+|++|.+||.+.+..+.+..|..+..
T Consensus       176 ~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~  255 (350)
T 1rdq_E          176 QQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV  255 (350)
T ss_dssp             TTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC
Confidence            4689999999988                          37899999999999999999999999999999999998877


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      .+|.    .+++++++||.+||+.+|.+|++     +.++++||||..+.
T Consensus       256 ~~p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          256 RFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             CCCT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             CCCC----CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence            7664    68999999999999999999998     89999999997654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.82  E-value=3e-20  Score=143.33  Aligned_cols=99  Identities=33%  Similarity=0.605  Sum_probs=89.7

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||++                            ++.++|||||||++|+|++|+.||.+.+..+....+....
T Consensus       170 ~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  249 (327)
T 3lm5_A          170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN  249 (327)
T ss_dssp             BCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc
Confidence            588999999988                            2679999999999999999999999999998888888887


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ...+......+++.+++||.+||+.+|.+||++.++++|||+.....
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          250 VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            77777777789999999999999999999999999999999977543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.82  E-value=1.7e-20  Score=151.96  Aligned_cols=98  Identities=37%  Similarity=0.611  Sum_probs=89.9

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++                           |+.++||||+||++|+|++|.+||.+.+..+.+..+..+.+
T Consensus       160 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  239 (486)
T 3mwu_A          160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY  239 (486)
T ss_dssp             TCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            467999999988                           26789999999999999999999999999999999999888


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .++.+.+..+++++++||.+||+.+|.+||++.++++|||+....
T Consensus       240 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence            877777778999999999999999999999999999999997654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.82  E-value=2.3e-20  Score=140.52  Aligned_cols=99  Identities=35%  Similarity=0.626  Sum_probs=89.1

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++||||+||++|+|++|+.||.+.+..+....+....
T Consensus       144 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  223 (277)
T 3f3z_A          144 PDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGT  223 (277)
T ss_dssp             TTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             CCCcEEEEecccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            3578999999988                           2778999999999999999999999999999999999888


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..++...+..+++++++||.+||+.+|.+||++.++++|+||.+..
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          224 FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence            8777665567899999999999999999999999999999997654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.82  E-value=2.9e-20  Score=155.90  Aligned_cols=96  Identities=31%  Similarity=0.525  Sum_probs=87.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++|||||||++|||++|.+||.+.+..+++..|..
T Consensus       477 ~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  556 (674)
T 3pfq_A          477 SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME  556 (674)
T ss_dssp             SSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS
T ss_pred             CCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            4689999999987                             38899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~~  101 (205)
                      ....+|.    .+++++++||.+||+++|.+|+++     .++++||||..+.+
T Consensus       557 ~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w  606 (674)
T 3pfq_A          557 HNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  606 (674)
T ss_dssp             SCCCCCT----TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCH
T ss_pred             CCCCCCc----cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCH
Confidence            8877775    689999999999999999999998     89999999987643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=4.3e-20  Score=148.14  Aligned_cols=96  Identities=28%  Similarity=0.556  Sum_probs=87.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             |+.++||||+||++|||++|+.||.+.+..+....+..
T Consensus       284 ~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  363 (446)
T 4ejn_A          284 KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  363 (446)
T ss_dssp             SSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh
Confidence            4688999999987                             37899999999999999999999999999999999988


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~~  101 (205)
                      ....+|.    .+++++++||.+||+.||.+||     ++.++++||||..+.+
T Consensus       364 ~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          364 EEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCCCCc----cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence            8777665    5899999999999999999999     9999999999987643

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.82  E-value=6e-20  Score=138.64  Aligned_cols=96  Identities=36%  Similarity=0.679  Sum_probs=88.1

Q ss_pred             CeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          4 AVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         4 ~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      +.+||+|||++                            ++.++||||+||++|+|++|..||.+....+....+.....
T Consensus       145 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~  224 (284)
T 3kk8_A          145 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY  224 (284)
T ss_dssp             CCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             CcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc
Confidence            45999999998                            27789999999999999999999999999999999998888


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+...+..+++++++||.+||+.+|++||++.++++|||+...
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          225 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence            87877777899999999999999999999999999999999764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.81  E-value=2e-20  Score=144.24  Aligned_cols=95  Identities=41%  Similarity=0.695  Sum_probs=85.9

Q ss_pred             eEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          5 VLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         5 ~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      .+||+|||++                            ++.++||||+||++|+|++|.+||.+.+..+.+..+......
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  235 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE  235 (326)
T ss_dssp             CEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC
Confidence            7999999988                            377899999999999999999999999988888888887777


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ++...+..+++.+++||.+||..+|.+||++.++++|||+...
T Consensus       236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            7665556789999999999999999999999999999999654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.81  E-value=7.7e-21  Score=144.73  Aligned_cols=83  Identities=24%  Similarity=0.436  Sum_probs=60.5

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      |+.++||||+||++|||++   ||.+... ...+..+.....  |+ .+...++..++||.+||++||.+||++.++++|
T Consensus       207 y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~--p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          207 YSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKF--PP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCC--CH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCC--CC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            4899999999999999996   8865322 233444443332  22 223457888999999999999999999999999


Q ss_pred             chhhhcccCC
Q psy14043         94 AWFAEIAIPN  103 (205)
Q Consensus        94 ~~~~~~~~~~  103 (205)
                      ||+..+..+.
T Consensus       281 ~~~~~~~~p~  290 (299)
T 4g31_A          281 AVFEDLDFPG  290 (299)
T ss_dssp             GGGCCC----
T ss_pred             HhhCCCCCCC
Confidence            9998765443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.81  E-value=3.3e-20  Score=146.89  Aligned_cols=97  Identities=35%  Similarity=0.653  Sum_probs=84.0

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHH
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE----ETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~----~~~~~i   50 (205)
                      ++.+||+|||++                            |+.++|||||||++|+|++|.+||.+....    .....+
T Consensus       200 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i  279 (400)
T 1nxk_A          200 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI  279 (400)
T ss_dssp             TCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH
T ss_pred             CccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH
Confidence            688999999988                            378999999999999999999999765432    245667


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+.+.++...+..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       280 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          280 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence            7777777766667899999999999999999999999999999999754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.81  E-value=3.5e-20  Score=145.02  Aligned_cols=96  Identities=31%  Similarity=0.554  Sum_probs=85.8

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .+|.+||+|||++.                                  +.++|||||||++|+|++|..||.+.+.....
T Consensus       235 ~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~  314 (365)
T 2y7j_A          235 DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML  314 (365)
T ss_dssp             TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence            46889999999872                                  45799999999999999999999998888888


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      ..+..+...++.+.+..+++++++||.+||..+|.+||++.++++||||.
T Consensus       315 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          315 RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            88888877766555567899999999999999999999999999999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=4.5e-20  Score=141.03  Aligned_cols=98  Identities=22%  Similarity=0.315  Sum_probs=79.0

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++                            ++.++||||+||++|+|++|++||.+.+..+....+...
T Consensus       155 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~  234 (308)
T 3g33_A          155 SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL  234 (308)
T ss_dssp             TTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            4688999999988                            378899999999999999999999998888877777542


Q ss_pred             CCCCCCC-----------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPE-----------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~-----------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ....+..                       ....+++++++||.+||+.||.+||++.++++|||+...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            2111111                       113578999999999999999999999999999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.81  E-value=6.1e-20  Score=144.00  Aligned_cols=96  Identities=28%  Similarity=0.463  Sum_probs=85.8

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||++                             |+.++|||||||++|||++|.+||.+.+..+.+..|..
T Consensus       174 ~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  253 (373)
T 2r5t_A          174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  253 (373)
T ss_dssp             TTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH
T ss_pred             CCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            4689999999987                             37889999999999999999999999999999999998


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc----ccccccchhhhccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA----GQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~----~~~l~~~~~~~~~~  101 (205)
                      ....++.    .+++++++||.+||+++|.+|+++    .++++|+||..+.+
T Consensus       254 ~~~~~~~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w  302 (373)
T 2r5t_A          254 KPLQLKP----NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW  302 (373)
T ss_dssp             SCCCCCS----SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCH
T ss_pred             cccCCCC----CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCH
Confidence            8776664    689999999999999999999987    58999999987643

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.81  E-value=6.4e-20  Score=142.67  Aligned_cols=102  Identities=26%  Similarity=0.371  Sum_probs=83.3

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++                                  ++.++||||+||++|+|++|.+||.+.+..+..
T Consensus       159 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  238 (351)
T 3mi9_A          159 RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL  238 (351)
T ss_dssp             TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            3688999999976                                  278899999999999999999999999888887


Q ss_pred             HHHHhCCCCCCCCcCCC----------------------------CCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGH----------------------------ISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+.......+...+..                            .++++++||.+||+.||.+||++.++++||||...
T Consensus       239 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          239 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             HHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             HHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            77766443333332222                            26789999999999999999999999999999765


Q ss_pred             ccCC
Q psy14043        100 AIPN  103 (205)
Q Consensus       100 ~~~~  103 (205)
                      ..+.
T Consensus       319 ~~~~  322 (351)
T 3mi9_A          319 PMPS  322 (351)
T ss_dssp             SCCC
T ss_pred             CCcc
Confidence            4443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.81  E-value=2.7e-20  Score=147.67  Aligned_cols=100  Identities=29%  Similarity=0.422  Sum_probs=84.6

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .+|++||+|||++                                  |+.++|||||||++|||++|++||.+.+..+.+
T Consensus       203 ~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~  282 (410)
T 3v8s_A          203 KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY  282 (410)
T ss_dssp             TTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             CCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHH
Confidence            4689999999998                                  136899999999999999999999999999998


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~~~  101 (205)
                      ..|......+..+....+++++++||.+||+.+|.+  |+++.++++||||..+.+
T Consensus       283 ~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w  338 (410)
T 3v8s_A          283 SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  338 (410)
T ss_dssp             HHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred             HHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence            888765432222233468999999999999988888  999999999999987654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.81  E-value=6.7e-20  Score=144.71  Aligned_cols=96  Identities=27%  Similarity=0.440  Sum_probs=81.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC---------CH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE---------SE   43 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~---------~~   43 (205)
                      .+|++||+|||++                             |+.++|||||||++|||++|++||.+.         ..
T Consensus       188 ~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~  267 (396)
T 4dc2_A          188 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE  267 (396)
T ss_dssp             TTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCH
T ss_pred             CCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhH
Confidence            4689999999987                             378999999999999999999999632         33


Q ss_pred             HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc------ccccccchhhhccc
Q psy14043         44 EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA------GQLLQVAWFAEIAI  101 (205)
Q Consensus        44 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------~~~l~~~~~~~~~~  101 (205)
                      ......+......+|.    .+++++++||.+||+++|.+|+++      .++++||||..+.+
T Consensus       268 ~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          268 DYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             HHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             HHHHHHHhccccCCCC----cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence            4466777777777665    689999999999999999999986      69999999987643

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.81  E-value=6.9e-20  Score=141.30  Aligned_cols=95  Identities=33%  Similarity=0.598  Sum_probs=85.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|.+||+|||++                             ++.++|||||||++|+|++|.+||.+.+..+....+..
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  235 (327)
T 3a62_A          156 HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK  235 (327)
T ss_dssp             TTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            4688999999987                             27789999999999999999999999999888999988


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      ....++.    .+++++++||.+||..+|.+||     ++.++++||||..+.
T Consensus       236 ~~~~~p~----~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          236 CKLNLPP----YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             TCCCCCT----TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             CCCCCCC----CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence            8776665    5899999999999999999999     678999999997654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.81  E-value=3.6e-20  Score=141.91  Aligned_cols=99  Identities=20%  Similarity=0.366  Sum_probs=78.2

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|++||.+.+..+.+..+.
T Consensus       154 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  233 (311)
T 3niz_A          154 SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF  233 (311)
T ss_dssp             TTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH
T ss_pred             CCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            4678999999988                              2778999999999999999999998876666555554


Q ss_pred             hCCCCCCCC--------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 VADYSFPPE--------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 ~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .......+.                          ....+++++++||.+||+.||.+||++.++++||||..+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            311110100                          1134788999999999999999999999999999998753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.81  E-value=5.8e-20  Score=145.18  Aligned_cols=100  Identities=31%  Similarity=0.388  Sum_probs=81.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             |+.++||||+||++|||++|++||.+.+..+.+..+.+
T Consensus       177 ~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~  256 (394)
T 4e7w_A          177 PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK  256 (394)
T ss_dssp             TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            4789999999988                             37889999999999999999999999888777766654


Q ss_pred             CC-----------------CCCCC--------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         53 AD-----------------YSFPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        53 ~~-----------------~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ..                 ..++.        .....+++++++||.+||+.+|.+||++.++++||||..+..
T Consensus       257 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          257 VLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             HHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             HhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence            21                 11111        012247899999999999999999999999999999987644

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.81  E-value=8.6e-20  Score=138.86  Aligned_cols=94  Identities=27%  Similarity=0.542  Sum_probs=81.5

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++.                                +.++||||+||++|+|++|+.||.+.........
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~  251 (298)
T 2zv2_A          172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK  251 (298)
T ss_dssp             TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHH
Confidence            46889999999881                                4568999999999999999999998888888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      +......++.  ...+++++++||.+||..+|++||++.++++|||+.
T Consensus       252 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          252 IKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            7776655443  236899999999999999999999999999999985

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.81  E-value=6.2e-20  Score=141.50  Aligned_cols=95  Identities=37%  Similarity=0.596  Sum_probs=82.3

Q ss_pred             eEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC-------CHHHHHH
Q psy14043          5 VLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE-------SEEETRA   48 (205)
Q Consensus         5 ~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~-------~~~~~~~   48 (205)
                      .+||+|||++                             |+.++||||+||++|+|++|.+||.+.       ...+...
T Consensus       147 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~  226 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK  226 (325)
T ss_dssp             EEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH
T ss_pred             cEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH
Confidence            7999999988                             377899999999999999999999764       3356778


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+..+.+.++...+..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       227 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          227 KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            888887777766666789999999999999999999999999999999764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.81  E-value=2.3e-20  Score=150.36  Aligned_cols=99  Identities=19%  Similarity=0.254  Sum_probs=78.2

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||+|                            |+.++||||+||++|||++|++||.+.+..+.+..|...
T Consensus       199 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~  278 (464)
T 3ttj_A          199 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ  278 (464)
T ss_dssp             TTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            3678999999998                            378999999999999999999999999888777776542


Q ss_pred             CCCCCCCcC--------------------------C------------CCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         54 DYSFPPEQC--------------------------G------------HISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        54 ~~~~~~~~~--------------------------~------------~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      ....++..+                          .            ..++++++||.+||..||++||++.++++|||
T Consensus       279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  358 (464)
T 3ttj_A          279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  358 (464)
T ss_dssp             HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence            111100000                          0            01567999999999999999999999999999


Q ss_pred             hhhcc
Q psy14043         96 FAEIA  100 (205)
Q Consensus        96 ~~~~~  100 (205)
                      |....
T Consensus       359 ~~~~~  363 (464)
T 3ttj_A          359 INVWY  363 (464)
T ss_dssp             TGGGC
T ss_pred             hhhcc
Confidence            97543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.81  E-value=7.7e-20  Score=139.49  Aligned_cols=98  Identities=31%  Similarity=0.545  Sum_probs=88.5

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++||||+||++|+|++|..||.+.+..+....+..+.
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  223 (304)
T 2jam_A          144 ENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY  223 (304)
T ss_dssp             TTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCC
T ss_pred             CCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC
Confidence            3678999999987                           2678999999999999999999999999888999998888


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..++...+..+++++++||.+||..+|++||++.++++|||+...
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          224 YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            777766667899999999999999999999999999999999764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.81  E-value=5.7e-20  Score=143.00  Aligned_cols=98  Identities=38%  Similarity=0.625  Sum_probs=83.1

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEE-TRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~-~~~~i~~~   53 (205)
                      ++.+||+|||++                            ++.++|||||||++|+|++|..||.+....+ ....+...
T Consensus       187 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~  266 (349)
T 2w4o_A          187 DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC  266 (349)
T ss_dssp             TCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT
T ss_pred             CCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC
Confidence            688999999987                            3779999999999999999999998765544 67777777


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ...++...+..+++++++||.+||..||++||++.++++|||+....
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          267 EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             CCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            76666656667999999999999999999999999999999997543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.80  E-value=1.1e-19  Score=139.87  Aligned_cols=99  Identities=22%  Similarity=0.362  Sum_probs=80.9

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|++||.+.+..+....+.
T Consensus       135 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  214 (324)
T 3mtl_A          135 ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF  214 (324)
T ss_dssp             TTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4678999999976                              3778999999999999999999999998888777765


Q ss_pred             hCCCCCCCC--------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 VADYSFPPE--------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 ~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ......+..                          ....+++++++||.+||+.||.+||++.++++||||....
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          215 RILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             HHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             HHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence            522111111                          1124789999999999999999999999999999997754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.80  E-value=8.9e-20  Score=140.08  Aligned_cols=100  Identities=28%  Similarity=0.354  Sum_probs=80.7

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|++||.+.+..+.+..+.
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  222 (317)
T 2pmi_A          143 KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF  222 (317)
T ss_dssp             TTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            4688999999987                              2778999999999999999999999988887777665


Q ss_pred             hCCCCCC------------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         52 VADYSFP------------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        52 ~~~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ......+                              +.....+++++++||.+||+.||++||++.++++||||.....
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             HHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence            4211000                              0011257899999999999999999999999999999987653

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=3.6e-20  Score=146.01  Aligned_cols=86  Identities=27%  Similarity=0.364  Sum_probs=69.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCC-----------------------------------
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE-----------------------------------   60 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----------------------------------   60 (205)
                      +.++||||+||++|||++|++||.+.+..+.+..|..... .|..                                   
T Consensus       209 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (388)
T 3oz6_A          209 TKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVID-FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTK  287 (388)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHH
T ss_pred             CChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcc
Confidence            7789999999999999999999999988887777653211 1100                                   


Q ss_pred             ---------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         61 ---------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        61 ---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                               ....+++++++||.+||+.||.+||++.++++|||+.....+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  338 (388)
T 3oz6_A          288 WKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP  338 (388)
T ss_dssp             HHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred             hhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence                     012578999999999999999999999999999999765443

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.80  E-value=1.1e-19  Score=138.45  Aligned_cols=97  Identities=26%  Similarity=0.439  Sum_probs=80.7

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             |+.++||||+||++|+|++|..||.+.+.......+..
T Consensus       151 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  230 (297)
T 3fxz_A          151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT  230 (297)
T ss_dssp             TTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            4688999999986                             37899999999999999999999998888776666654


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...... .....+++.+++||.+||+.+|.+||++.++++|||+...
T Consensus       231 ~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          231 NGTPEL-QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HCSCCC-SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             CCCCCC-CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            332211 1223689999999999999999999999999999999754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.80  E-value=1.1e-19  Score=141.15  Aligned_cols=95  Identities=27%  Similarity=0.460  Sum_probs=80.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCC---------CCH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLD---------ESE   43 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~---------~~~   43 (205)
                      .+|++||+|||++                             |+.++||||+||++|||++|++||..         ...
T Consensus       145 ~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  224 (345)
T 3a8x_A          145 SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE  224 (345)
T ss_dssp             TTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CH
T ss_pred             CCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccH
Confidence            4689999999987                             37789999999999999999999965         234


Q ss_pred             HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc------ccccccchhhhcc
Q psy14043         44 EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA------GQLLQVAWFAEIA  100 (205)
Q Consensus        44 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------~~~l~~~~~~~~~  100 (205)
                      ......+......+|.    .+++++++||.+||..+|.+|+++      .++++||||..+.
T Consensus       225 ~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          225 DYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             HHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            4566777777666664    689999999999999999999996      6999999998764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=9.8e-20  Score=141.16  Aligned_cols=85  Identities=34%  Similarity=0.583  Sum_probs=77.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|||||||++|+|++|+.||.+.+..+....+......++......+++++++||.+||..+|.+||++.++++|||
T Consensus       254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~  333 (345)
T 3hko_A          254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW  333 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence            56899999999999999999999999998888888888777766665668999999999999999999999999999999


Q ss_pred             hhhcc
Q psy14043         96 FAEIA  100 (205)
Q Consensus        96 ~~~~~  100 (205)
                      +....
T Consensus       334 ~~~~~  338 (345)
T 3hko_A          334 ISQFS  338 (345)
T ss_dssp             HHTTS
T ss_pred             hccCh
Confidence            98754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.80  E-value=5.5e-20  Score=149.63  Aligned_cols=96  Identities=33%  Similarity=0.573  Sum_probs=88.6

Q ss_pred             eEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC
Q psy14043          5 VLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF   57 (205)
Q Consensus         5 ~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~   57 (205)
                      .+||+|||++                           |+.++||||+||++|+|++|.+||.+.+..+.+..+..+.+.+
T Consensus       187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  266 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF  266 (504)
T ss_dssp             SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            6999999988                           3789999999999999999999999999999999999988887


Q ss_pred             CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         58 PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        58 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +...+..+++++++||.+||+.+|.+||++.++++|||+....
T Consensus       267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            7666678999999999999999999999999999999997654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.80  E-value=4.9e-20  Score=144.97  Aligned_cols=97  Identities=25%  Similarity=0.332  Sum_probs=75.9

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ++.+||+|||++                          ++.++||||+||++|||++|++||.+.+..+.+..+......
T Consensus       197 ~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  276 (382)
T 2vx3_A          197 RSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI  276 (382)
T ss_dssp             SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             CCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            578999999988                          378999999999999999999999998888877776542111


Q ss_pred             CCCCc-----------------------------------CCC-------------------------CCHHHHHHHHHh
Q psy14043         57 FPPEQ-----------------------------------CGH-------------------------ISVPARELIGQL   76 (205)
Q Consensus        57 ~~~~~-----------------------------------~~~-------------------------~~~~~~~li~~~   76 (205)
                      .+...                                   ...                         ..+++++||.+|
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m  356 (382)
T 2vx3_A          277 PPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRM  356 (382)
T ss_dssp             CCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHh
Confidence            11000                                   000                         013789999999


Q ss_pred             cccCcCCCCCcccccccchhhhc
Q psy14043         77 LNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        77 l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      |+.||.+||++.++++||||...
T Consensus       357 L~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          357 LDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             cCCChhhCCCHHHHhcCcccccC
Confidence            99999999999999999999753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.80  E-value=9.1e-20  Score=138.10  Aligned_cols=97  Identities=24%  Similarity=0.345  Sum_probs=78.3

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|.+||.+.+..+.+..+.
T Consensus       135 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  214 (288)
T 1ob3_A          135 REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF  214 (288)
T ss_dssp             TTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4688999999976                              3778999999999999999999999888777766664


Q ss_pred             hCCCCCC-------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         52 VADYSFP-------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        52 ~~~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.....+                         ......+++++++||.+||+.||++||++.++++||||..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            3110000                         0112357899999999999999999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.80  E-value=3.9e-19  Score=137.48  Aligned_cols=110  Identities=33%  Similarity=0.561  Sum_probs=93.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|||||||++|+|++|+.||.+....+....+..
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  255 (335)
T 2owb_A          176 EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK  255 (335)
T ss_dssp             TTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc
Confidence            3578999999988                             26689999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCCccccccccccC
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQN  115 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  115 (205)
                      ....++.    .+++++++||.+||+.+|++||++.++++|+||.....+....+.+....|.
T Consensus       256 ~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~~~~~~~~~~~~  314 (335)
T 2owb_A          256 NEYSIPK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPR  314 (335)
T ss_dssp             TCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCCGGGGTSCCC
T ss_pred             CCCCCCc----cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccccCCcccccCCCc
Confidence            7766554    5899999999999999999999999999999998876666555555554444

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.80  E-value=2.5e-19  Score=142.71  Aligned_cols=99  Identities=30%  Similarity=0.372  Sum_probs=79.7

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++                             |+.++||||+||++|||++|++||.+.+..+.+..+.+.
T Consensus       193 ~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~  272 (420)
T 1j1b_A          193 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV  272 (420)
T ss_dssp             TTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            467999999998                             377899999999999999999999998877766665431


Q ss_pred             -----------------CCCCCCC--------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         54 -----------------DYSFPPE--------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 -----------------~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                                       .+.++..        ....+++++++||.+||..+|.+|+++.++++||||.....
T Consensus       273 lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             HCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             hCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence                             1111110        11356899999999999999999999999999999976543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.80  E-value=4.6e-19  Score=134.51  Aligned_cols=108  Identities=33%  Similarity=0.571  Sum_probs=91.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|+||+||++|+|++|+.||.+....+....+..
T Consensus       150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  229 (294)
T 2rku_A          150 EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK  229 (294)
T ss_dssp             TTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             CCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh
Confidence            3678999999988                             26689999999999999999999999888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCCccccccccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWH  113 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  113 (205)
                      .....+.    .+++.+.++|.+||+.+|++||++.++++|+|+.....+....+.+....
T Consensus       230 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~~~  286 (294)
T 2rku_A          230 NEYSIPK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP  286 (294)
T ss_dssp             TCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCCGGGGTSC
T ss_pred             ccCCCcc----ccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCCCCCccCCCCC
Confidence            7665554    68999999999999999999999999999999987766655555544443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.80  E-value=7.9e-20  Score=142.30  Aligned_cols=95  Identities=35%  Similarity=0.577  Sum_probs=82.8

Q ss_pred             CeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          4 AVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         4 ~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +.+||+|||++                             |+.++||||+||++|+|++|.+||.+. ..+....+..+.
T Consensus       170 ~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~  248 (351)
T 3c0i_A          170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGK  248 (351)
T ss_dssp             CCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTC
T ss_pred             CcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCC
Confidence            45999999988                             378899999999999999999999874 456777777777


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...+...+..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       249 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             CCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            766655556789999999999999999999999999999999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.80  E-value=2.4e-19  Score=135.64  Aligned_cols=95  Identities=33%  Similarity=0.666  Sum_probs=81.5

Q ss_pred             CCeEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++.                           +.++||||+||++|+|++|+.||.+.+..+....+.....
T Consensus       163 ~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~  242 (285)
T 3is5_A          163 HSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP  242 (285)
T ss_dssp             TCCEEECCCCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CCCEEEEeeecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCc
Confidence            4779999999982                           6789999999999999999999999988888777776655


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+.. ...+++++.+||.+||+.+|.+||++.++++||||++
T Consensus       243 ~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          243 NYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            54432 2347999999999999999999999999999999964

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.80  E-value=1.1e-19  Score=140.32  Aligned_cols=98  Identities=21%  Similarity=0.243  Sum_probs=78.7

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++.+||+|||++                              ++.++|||||||++|+|++|.+||.+.+..+.+..+..
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          173 TPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence            456999999977                              37889999999999999999999999888877776654


Q ss_pred             CCCCCCCCcC--------------------------CCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQC--------------------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .....+...+                          ..+++++++||.+||+.||.+||++.++++||||....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence            3111111100                          11679999999999999999999999999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.4e-19  Score=141.80  Aligned_cols=101  Identities=23%  Similarity=0.371  Sum_probs=81.3

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                           |+.++||||+||++|||++|++||.+.+..+.+..|....
T Consensus       163 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~  242 (367)
T 1cm8_A          163 EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT  242 (367)
T ss_dssp             TTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            3678999999988                           3788999999999999999999999988877777665421


Q ss_pred             CCCC-----------------------C----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         55 YSFP-----------------------P----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        55 ~~~~-----------------------~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      ...+                       .    ......++++++||.+||..||.+|+++.++++||||.....+
T Consensus       243 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~  317 (367)
T 1cm8_A          243 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  317 (367)
T ss_dssp             CCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             CCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCC
Confidence            1110                       0    1123579999999999999999999999999999999876543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.79  E-value=1.8e-19  Score=136.65  Aligned_cols=99  Identities=23%  Similarity=0.357  Sum_probs=77.0

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCC-CCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSP-FLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~p-f~~~~~~~~~~~i   50 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|..| |.+.+..+.+..+
T Consensus       136 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i  215 (292)
T 3o0g_A          136 RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  215 (292)
T ss_dssp             TTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHH
T ss_pred             CCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence            4688999999988                              37889999999999999987666 5666766666666


Q ss_pred             HhCCCCCCC-------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         51 SVADYSFPP-------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .......+.                         .....+++++++||.+||+.||++||++.++++||||.+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          216 FRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             HHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            542111110                         11235789999999999999999999999999999998754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.79  E-value=1.9e-19  Score=135.62  Aligned_cols=95  Identities=35%  Similarity=0.649  Sum_probs=85.1

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                           ++.++||||+||++|+|++|..||.+.+..+....+....
T Consensus       144 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  223 (279)
T 3fdn_A          144 SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE  223 (279)
T ss_dssp             TTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             CCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC
Confidence            4688999999976                           2678999999999999999999999999988888888877


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..++.    .+++++++||.+||..+|.+||++.++++|||+....
T Consensus       224 ~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          224 FTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             CCCCT----TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             CCCCC----cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence            66664    5899999999999999999999999999999997654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.79  E-value=3.1e-19  Score=135.64  Aligned_cols=99  Identities=30%  Similarity=0.534  Sum_probs=87.7

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                  +.++|||||||++|+|++|..||.+.+..+..
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  238 (298)
T 1phk_A          159 DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML  238 (298)
T ss_dssp             TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH
Confidence            46789999999872                                  45899999999999999999999998888888


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+......++...+..+++++++||.+||..+|.+||++.++++||||....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          239 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            88888877776655567899999999999999999999999999999997654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.79  E-value=3.8e-20  Score=140.96  Aligned_cols=98  Identities=34%  Similarity=0.628  Sum_probs=74.9

Q ss_pred             CCeEEEEecCCC-------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----HhCCCCCCCCcCCCCCHHHHH
Q psy14043          3 GAVLKLIDLGSS-------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----SVADYSFPPEQCGHISVPARE   71 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~   71 (205)
                      ++.+||+|||++       ++.++||||+||++|+|++|.+||.+.........+    ......++...+..+++++++
T Consensus       156 ~~~~kl~Dfg~a~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T 3m2w_A          156 NAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM  235 (299)
T ss_dssp             TCCEEECCCTTCEECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHH
T ss_pred             CCcEEEeccccccccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHH
Confidence            688999999999       589999999999999999999999776554332221    122223332223468999999


Q ss_pred             HHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         72 LIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        72 li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ||.+||..+|.+||++.++++|||+....
T Consensus       236 li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          236 LIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            99999999999999999999999997654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.79  E-value=1.8e-20  Score=145.05  Aligned_cols=94  Identities=30%  Similarity=0.541  Sum_probs=78.4

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++.                             +.++||||+||++|+|++|..||.+....+....+..
T Consensus       143 ~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~  222 (336)
T 3h4j_B          143 DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS  222 (336)
T ss_dssp             TTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS
T ss_pred             CCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence            35789999999882                             5789999999999999999999987765555544444


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+..|.    .+++++++||.+||..||.+||++.++++|||+...
T Consensus       223 ~~~~~p~----~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          223 CVYVMPD----FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             SCCCCCT----TSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             CCCCCcc----cCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            4444443    689999999999999999999999999999999753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.79  E-value=1.4e-19  Score=139.10  Aligned_cols=95  Identities=42%  Similarity=0.720  Sum_probs=85.4

Q ss_pred             eEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          5 VLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         5 ~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      .+||+|||++                            ++.++||||+||++|+|++|..||.+.+..+....+......
T Consensus       157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  236 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD  236 (321)
T ss_dssp             CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             CEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc
Confidence            7999999988                            267899999999999999999999999998888888887776


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ++...+..+++.+++||.+||..+|.+||++.++++|||+...
T Consensus       237 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence            6655556789999999999999999999999999999999654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.79  E-value=1.5e-19  Score=144.48  Aligned_cols=101  Identities=33%  Similarity=0.564  Sum_probs=84.7

Q ss_pred             CCCeEEEEecCCC-----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~   46 (205)
                      .+|++||+|||+|                                   |+.++||||+||++|||++|++||.+.+..+.
T Consensus       210 ~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~  289 (437)
T 4aw2_A          210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET  289 (437)
T ss_dssp             TTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             CCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH
Confidence            4689999999988                                   25689999999999999999999999999888


Q ss_pred             HHHHHhCC--CCCCCCcCCCCCHHHHHHHHHhcccCcCC--CCCcccccccchhhhcccCC
Q psy14043         47 RAHISVAD--YSFPPEQCGHISVPARELIGQLLNTHADK--RPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        47 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~~l~~~~~~~~~~~~  103 (205)
                      +..|....  ..+|. ....+++++++||.+||..+|++  |+++.++++||||..+.+..
T Consensus       290 ~~~i~~~~~~~~~p~-~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          290 YGKIMNHKERFQFPT-QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             HHHHHTHHHHCCCCS-SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             HHhhhhccccccCCc-ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence            88887533  33332 22468999999999999988888  89999999999998776543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=2.5e-19  Score=135.57  Aligned_cols=97  Identities=37%  Similarity=0.613  Sum_probs=86.9

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++                           ++.++||||+||++|+|++|..||.+.+..+....+..+..
T Consensus       160 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  239 (287)
T 2wei_A          160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY  239 (287)
T ss_dssp             TCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             cccEEEeccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            357999999977                           26789999999999999999999999998888888888877


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .++...+..++++++++|.+||..+|.+||++.++++|||+...
T Consensus       240 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            76666666799999999999999999999999999999999764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.79  E-value=1.2e-19  Score=142.09  Aligned_cols=102  Identities=27%  Similarity=0.387  Sum_probs=78.0

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                           |+.++||||+||++|+|++|++||.+.+..+.+..|.+..
T Consensus       167 ~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~  246 (367)
T 2fst_X          167 EDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV  246 (367)
T ss_dssp             TTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            3678999999988                           3778999999999999999999999988877776665421


Q ss_pred             CC-----------------------CCC----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         55 YS-----------------------FPP----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        55 ~~-----------------------~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ..                       .+.    ......++++++||.+||..||.+||++.++++|||+.....+.
T Consensus       247 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~  322 (367)
T 2fst_X          247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD  322 (367)
T ss_dssp             CSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGG
T ss_pred             CCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCC
Confidence            10                       011    01235689999999999999999999999999999998765443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.79  E-value=4.3e-19  Score=134.05  Aligned_cols=95  Identities=33%  Similarity=0.570  Sum_probs=84.2

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                           ++.++|+||+||++|+|++|..||...+..+....+....
T Consensus       149 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  228 (284)
T 2vgo_A          149 YKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD  228 (284)
T ss_dssp             TTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC
T ss_pred             CCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccc
Confidence            4688999999977                           3778999999999999999999999988888888888776


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..++.    .++++++++|.+||..+|.+||++.++++|||+....
T Consensus       229 ~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          229 LKFPP----FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             CCCCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             cCCCC----cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence            66554    5899999999999999999999999999999997643

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.79  E-value=2.3e-19  Score=144.75  Aligned_cols=94  Identities=30%  Similarity=0.500  Sum_probs=84.1

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++.                             +.++||||+||++|+|++|..||.+.+..+....+..
T Consensus       151 ~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  230 (476)
T 2y94_A          151 AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD  230 (476)
T ss_dssp             TTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT
T ss_pred             cCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence            36789999999881                             5689999999999999999999999888888899888


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.+..|.    .+++++++||.+||..+|.+||++.++++|||+...
T Consensus       231 ~~~~~p~----~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          231 GIFYTPQ----YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             TCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             CCcCCCc----cCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            7766554    589999999999999999999999999999999753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.78  E-value=4.5e-19  Score=138.20  Aligned_cols=101  Identities=22%  Similarity=0.306  Sum_probs=81.0

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++                             ++.++||||+||++|+|++|++||.+.+..+.+..+...
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  247 (360)
T 3e3p_A          168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV  247 (360)
T ss_dssp             TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence            689999999988                             278899999999999999999999998888777766542


Q ss_pred             CCCCC----------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         54 DYSFP----------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        54 ~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ....+                            .......++++++||.+||+.+|.+||++.++++||||.....+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  325 (360)
T 3e3p_A          248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA  325 (360)
T ss_dssp             HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred             cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCcc
Confidence            11000                            001112578999999999999999999999999999998875443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=3.2e-19  Score=138.57  Aligned_cols=100  Identities=27%  Similarity=0.292  Sum_probs=80.7

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|.+||.+.+..+.+..+.
T Consensus       147 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~  226 (346)
T 1ua2_A          147 ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF  226 (346)
T ss_dssp             TTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            4688999999987                              2678999999999999999999999988887777765


Q ss_pred             hCCCCCCCC------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         52 VADYSFPPE------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        52 ~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ......+..                        ....+++++++||.+||..+|.+||++.++++|+||.....
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          227 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             HHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence            421111100                        11356799999999999999999999999999999976543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.78  E-value=1.5e-19  Score=141.28  Aligned_cols=102  Identities=24%  Similarity=0.265  Sum_probs=80.7

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      .++.+||+|||++                                 ++.++||||+||++|+|++|++||.+.+..+.+.
T Consensus       163 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  242 (364)
T 3qyz_A          163 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN  242 (364)
T ss_dssp             TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHH
T ss_pred             CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHH
Confidence            4678999999987                                 2778999999999999999999999887766666


Q ss_pred             HHHhCCCCCC--------------------C-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         49 HISVADYSFP--------------------P-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~~~~--------------------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .+.......+                    .       .....+++++++||.+||..+|.+||++.++++|||+.....
T Consensus       243 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          243 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence            6543111100                    0       012357899999999999999999999999999999987654


Q ss_pred             CC
Q psy14043        102 PN  103 (205)
Q Consensus       102 ~~  103 (205)
                      +.
T Consensus       323 ~~  324 (364)
T 3qyz_A          323 PS  324 (364)
T ss_dssp             GG
T ss_pred             cc
Confidence            43

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=2.1e-19  Score=141.45  Aligned_cols=99  Identities=26%  Similarity=0.373  Sum_probs=80.9

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      +++.+||+|||++                             |+.++||||+||++|+|++|++||.+.+..+.+..+.+
T Consensus       177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  256 (383)
T 3eb0_A          177 KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ  256 (383)
T ss_dssp             TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            3689999999998                             37889999999999999999999999888877776654


Q ss_pred             CC-----------------CCCCCC--------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 AD-----------------YSFPPE--------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~-----------------~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..                 ..++..        .....++++++||.+||..+|.+||++.++++||||....
T Consensus       257 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          257 IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence            11                 111110        1235789999999999999999999999999999997653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.78  E-value=1.8e-19  Score=138.05  Aligned_cols=85  Identities=41%  Similarity=0.716  Sum_probs=70.6

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCC---------------HHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccC
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDES---------------EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTH   80 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~---------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   80 (205)
                      +.++||||+||++|+|++|.+||.+..               .......+......++...+..+++++++||.+||..|
T Consensus       204 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  283 (316)
T 2ac3_A          204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRD  283 (316)
T ss_dssp             TTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             CcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCC
Confidence            567899999999999999999997653               24466777777777765555578999999999999999


Q ss_pred             cCCCCCcccccccchhhhcc
Q psy14043         81 ADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        81 p~~R~~~~~~l~~~~~~~~~  100 (205)
                      |.+||++.++++|||+....
T Consensus       284 P~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          284 AKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             TTTSCCHHHHHHSTTCC---
T ss_pred             hhhCCCHHHHhcChhhcCCC
Confidence            99999999999999997653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.78  E-value=9.4e-20  Score=142.14  Aligned_cols=95  Identities=24%  Similarity=0.330  Sum_probs=77.4

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ++.+||+|||++                          ++.++||||+||++|+|++|+.||.+.+..+.+..+......
T Consensus       198 ~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  277 (360)
T 3llt_A          198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQP  277 (360)
T ss_dssp             CCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCC
Confidence            678999999998                          388999999999999999999999998888777776654333


Q ss_pred             CCCCc------------------------------------------CCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         57 FPPEQ------------------------------------------CGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        57 ~~~~~------------------------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      .+...                                          ....++.+.+||.+||+.||.+||++.++++||
T Consensus       278 ~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp  357 (360)
T 3llt_A          278 IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHK  357 (360)
T ss_dssp             CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence            32100                                          001237788999999999999999999999999


Q ss_pred             hhh
Q psy14043         95 WFA   97 (205)
Q Consensus        95 ~~~   97 (205)
                      ||+
T Consensus       358 ~f~  360 (360)
T 3llt_A          358 FLE  360 (360)
T ss_dssp             GGC
T ss_pred             ccC
Confidence            984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.78  E-value=2.6e-19  Score=141.87  Aligned_cols=101  Identities=23%  Similarity=0.277  Sum_probs=74.9

Q ss_pred             CCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH------
Q psy14043          3 GAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE------   43 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~------   43 (205)
                      ++.+||+|||++                                 |+.++||||+||++|+|++|.+||.+...      
T Consensus       168 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  247 (405)
T 3rgf_A          168 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN  247 (405)
T ss_dssp             TTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------C
T ss_pred             CCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccc
Confidence            578999999988                                 27789999999999999999999976543      


Q ss_pred             ---HHHHHHHHhCCCCCCCCcC----------------------------------CCCCHHHHHHHHHhcccCcCCCCC
Q psy14043         44 ---EETRAHISVADYSFPPEQC----------------------------------GHISVPARELIGQLLNTHADKRPT   86 (205)
Q Consensus        44 ---~~~~~~i~~~~~~~~~~~~----------------------------------~~~~~~~~~li~~~l~~~p~~R~~   86 (205)
                         .+.+..+.......+...+                                  ...++++++||.+||+.||.+||+
T Consensus       248 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~t  327 (405)
T 3rgf_A          248 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT  327 (405)
T ss_dssp             CCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCC
T ss_pred             cchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCC
Confidence               2334443321111111111                                  112788999999999999999999


Q ss_pred             cccccccchhhhcccCC
Q psy14043         87 AGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        87 ~~~~l~~~~~~~~~~~~  103 (205)
                      +.++++||||.....+.
T Consensus       328 a~e~L~hp~f~~~~~~~  344 (405)
T 3rgf_A          328 SEQAMQDPYFLEDPLPT  344 (405)
T ss_dssp             HHHHHTSGGGTSSSCCC
T ss_pred             HHHHhcChhhccCCCCc
Confidence            99999999998765443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.78  E-value=6.7e-19  Score=135.46  Aligned_cols=98  Identities=20%  Similarity=0.398  Sum_probs=82.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++||||+||++|+|++|..||.+.+..+....+..
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~  255 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD  255 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence            3688999999987                             26789999999999999999999998888888777776


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ...... .....+++++++||.+||+.+|++||++.++++|||+....
T Consensus       256 ~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          256 SPPPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             SSCCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             CCCCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence            543221 12235799999999999999999999999999999997654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.78  E-value=1.2e-19  Score=144.97  Aligned_cols=94  Identities=32%  Similarity=0.378  Sum_probs=74.7

Q ss_pred             EEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC
Q psy14043          6 LKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP   59 (205)
Q Consensus         6 ~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~   59 (205)
                      +||+|||++                          |+.++|||||||++|||++|.+||.+.+..+.+..+.......+.
T Consensus       241 vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~  320 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ  320 (429)
T ss_dssp             EEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             eEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            999999998                          488999999999999999999999998887776666532100000


Q ss_pred             ------------------------------------------------C-------cCCCCCHHHHHHHHHhcccCcCCC
Q psy14043         60 ------------------------------------------------E-------QCGHISVPARELIGQLLNTHADKR   84 (205)
Q Consensus        60 ------------------------------------------------~-------~~~~~~~~~~~li~~~l~~~p~~R   84 (205)
                                                                      .       .....++++++||.+||+.||.+|
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R  400 (429)
T 3kvw_A          321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR  400 (429)
T ss_dssp             HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence                                                            0       011247889999999999999999


Q ss_pred             CCcccccccchhhhc
Q psy14043         85 PTAGQLLQVAWFAEI   99 (205)
Q Consensus        85 ~~~~~~l~~~~~~~~   99 (205)
                      |++.++++||||...
T Consensus       401 pta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          401 MTPGQALRHPWLRRR  415 (429)
T ss_dssp             CCHHHHHTSTTTC--
T ss_pred             CCHHHHhCChhhccC
Confidence            999999999999764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.78  E-value=3.5e-19  Score=139.61  Aligned_cols=101  Identities=26%  Similarity=0.402  Sum_probs=81.1

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                           ++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus       179 ~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  258 (371)
T 4exu_A          179 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT  258 (371)
T ss_dssp             TTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence            3678999999988                           2778999999999999999999999988877766664311


Q ss_pred             CCC-----------------------CC----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         55 YSF-----------------------PP----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        55 ~~~-----------------------~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      ...                       +.    .....+++++++||.+||+.+|.+||++.++++||||.....+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  333 (371)
T 4exu_A          259 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP  333 (371)
T ss_dssp             CCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             CCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCc
Confidence            100                       00    0123579999999999999999999999999999999876443

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.78  E-value=6e-19  Score=135.65  Aligned_cols=100  Identities=20%  Similarity=0.312  Sum_probs=81.2

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++                            ++.++||||+||++|+|++|++||.+.+..+.+..+...
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~  234 (326)
T 1blx_A          155 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV  234 (326)
T ss_dssp             TTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            4678999999988                            278899999999999999999999998887777766532


Q ss_pred             CCC-----CC------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         54 DYS-----FP------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 ~~~-----~~------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ...     ++                  ......+++++++||.+||..+|.+||++.++++|||+.....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             HCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence            100     00                  0122468899999999999999999999999999999987643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.78  E-value=7e-19  Score=138.42  Aligned_cols=96  Identities=23%  Similarity=0.380  Sum_probs=81.2

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCC---CCHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLD---ESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~---~~~~~~~   47 (205)
                      .+|.+||+|||++                               |+.++|||||||++|+|++|++||..   ....+..
T Consensus       150 ~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~  229 (384)
T 4fr4_A          150 EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV  229 (384)
T ss_dssp             TTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH
T ss_pred             CCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence            4689999999988                               26689999999999999999999974   3455666


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-cccccccchhhhccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-AGQLLQVAWFAEIAI  101 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~~l~~~~~~~~~~  101 (205)
                      ..+......+|.    .+++++.+||.+||..+|.+|++ +.++++||||..+.+
T Consensus       230 ~~~~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          230 HTFETTVVTYPS----AWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             HHHHHCCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             HHHhhcccCCCC----cCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence            677766666664    68999999999999999999998 899999999976543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.78  E-value=9.3e-19  Score=136.13  Aligned_cols=96  Identities=26%  Similarity=0.369  Sum_probs=81.4

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            ++.++||||+||++|||++|++||.+.+..+....+...
T Consensus       189 ~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~  268 (348)
T 1u5q_A          189 EPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  268 (348)
T ss_dssp             TTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             CCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence            3689999999987                            266899999999999999999999988887777777665


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+..  ....+++.+++||.+||+.+|++||++.++++|+|+...
T Consensus       269 ~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          269 ESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             CCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             CCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence            43222  224689999999999999999999999999999999654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.77  E-value=2e-19  Score=141.05  Aligned_cols=98  Identities=21%  Similarity=0.316  Sum_probs=76.9

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||++                            |+.++||||+||++|+|++|..||.+.+..+.+..+...
T Consensus       162 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  241 (371)
T 2xrw_A          162 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ  241 (371)
T ss_dssp             TTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-
T ss_pred             CCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            3678999999998                            378999999999999999999999998888777776543


Q ss_pred             CCCCCCCc-------------------------------C-------CCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         54 DYSFPPEQ-------------------------------C-------GHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        54 ~~~~~~~~-------------------------------~-------~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .....+..                               .       ...++++++||.+||..||.+||++.++++|||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  321 (371)
T 2xrw_A          242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY  321 (371)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred             hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence            21111000                               0       001568899999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      +...
T Consensus       322 ~~~~  325 (371)
T 2xrw_A          322 INVW  325 (371)
T ss_dssp             HHTT
T ss_pred             hhhh
Confidence            9754

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.77  E-value=7e-19  Score=143.76  Aligned_cols=96  Identities=23%  Similarity=0.413  Sum_probs=82.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE----SEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~----~~~~~~~   48 (205)
                      .+|.+||+|||++                             |+.++|||||||++|||++|++||.+.    ...++..
T Consensus       324 ~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~  403 (543)
T 3c4z_A          324 DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ  403 (543)
T ss_dssp             TTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH
T ss_pred             CCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH
Confidence            4689999999998                             388899999999999999999999865    4566777


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCc-----ccccccchhhhccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTA-----GQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~~~~~~~~~~  101 (205)
                      .+......+|.    .+++++++||.+||+++|.+||+.     .++++||||..+.+
T Consensus       404 ~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          404 RVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             HHHHCCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             HHhhcccCCCc----ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence            77777666664    689999999999999999999964     78999999987643

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.77  E-value=1.8e-18  Score=134.65  Aligned_cols=101  Identities=26%  Similarity=0.414  Sum_probs=80.7

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                           ++.++||||+||++|+|++|..||.+.+..+.+..+....
T Consensus       161 ~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~  240 (353)
T 3coi_A          161 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT  240 (353)
T ss_dssp             TTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHH
T ss_pred             CCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            3678999999988                           2778999999999999999999999888777666654311


Q ss_pred             C-----------------------CCC----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         55 Y-----------------------SFP----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        55 ~-----------------------~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      .                       ..+    ......+++++++||.+||..+|++||++.++++||||.....+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          241 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP  315 (353)
T ss_dssp             CBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             CCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCc
Confidence            0                       000    11223679999999999999999999999999999999875443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.77  E-value=3e-19  Score=134.72  Aligned_cols=97  Identities=42%  Similarity=0.711  Sum_probs=86.0

Q ss_pred             CeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          4 AVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         4 ~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      +.+||+|||++                            ++.++||||+||++|+|++|..||.+.+..+....+.....
T Consensus       149 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  228 (283)
T 3bhy_A          149 PRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY  228 (283)
T ss_dssp             CCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC
T ss_pred             CceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc
Confidence            37999999988                            26789999999999999999999999988888888887776


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+......+++.+++||.+||..+|++||++.++++|||+....
T Consensus       229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            666555567899999999999999999999999999999997754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.77  E-value=3.4e-19  Score=136.47  Aligned_cols=103  Identities=24%  Similarity=0.301  Sum_probs=81.4

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++                                 ++.++|||||||++|+|++|+.||.+.+..+...
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  235 (320)
T 2i6l_A          156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ  235 (320)
T ss_dssp             TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            3578999999987                                 2667999999999999999999999988877776


Q ss_pred             HHHhCCCCCC--------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         49 HISVADYSFP--------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        49 ~i~~~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      .+........                          ......+++++++||.+||+.+|.+||++.++++|||+.....+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred             HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCc
Confidence            6654322110                          01123589999999999999999999999999999999877655


Q ss_pred             CC
Q psy14043        103 NN  104 (205)
Q Consensus       103 ~~  104 (205)
                      ..
T Consensus       316 ~~  317 (320)
T 2i6l_A          316 MD  317 (320)
T ss_dssp             --
T ss_pred             cC
Confidence            43

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.77  E-value=5.6e-19  Score=144.91  Aligned_cols=95  Identities=28%  Similarity=0.473  Sum_probs=81.2

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE----SEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~----~~~~~~~~   49 (205)
                      .+|++||+|||++                            |+.++||||+||++|||++|.+||.+.    ...++...
T Consensus       321 ~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~  400 (576)
T 2acx_A          321 DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL  400 (576)
T ss_dssp             TTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH
T ss_pred             CCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH
Confidence            4689999999998                            378899999999999999999999875    34556677


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      +......++.    .+++++++||.+||+.+|.+|+     ++.++++||||..+.
T Consensus       401 i~~~~~~~p~----~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          401 VKEVPEEYSE----RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             HHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             hhcccccCCc----cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence            7766555553    6899999999999999999999     679999999998754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.77  E-value=9.7e-19  Score=133.28  Aligned_cols=96  Identities=29%  Similarity=0.519  Sum_probs=85.3

Q ss_pred             CCCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      .++.+||+|||.+.                                 +.++||||+||++|+|++|..||.+.+..+...
T Consensus       144 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  223 (305)
T 2wtk_C          144 TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE  223 (305)
T ss_dssp             TTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Confidence            46889999999872                                 457999999999999999999999998888888


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .+......++.    .+++++.+||.+||..+|.+||++.++++|+|+.....
T Consensus       224 ~i~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          224 NIGKGSYAIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHHCCCCCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHhcCCCCCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            88887766554    68999999999999999999999999999999987544

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.77  E-value=2.4e-19  Score=138.79  Aligned_cols=99  Identities=37%  Similarity=0.694  Sum_probs=72.5

Q ss_pred             CCeEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHH
Q psy14043          3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEET----RAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~----~~~i~   51 (205)
                      ++.+||+|||++.                           +.++||||+||++|+|++|..||.+......    ...+.
T Consensus       167 ~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  246 (336)
T 3fhr_A          167 DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR  246 (336)
T ss_dssp             TCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred             CceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhh
Confidence            4669999999982                           5689999999999999999999976654433    33344


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ......+...+..+++++++||.+||..+|.+||++.++++|||+.....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  296 (336)
T 3fhr_A          247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMV  296 (336)
T ss_dssp             ----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGG
T ss_pred             ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccccc
Confidence            44455555556679999999999999999999999999999999976543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.77  E-value=1.1e-19  Score=142.41  Aligned_cols=99  Identities=18%  Similarity=0.223  Sum_probs=75.8

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHH--
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEET--RAH--   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~--~~~--   49 (205)
                      .+|.+||+|||++                            |+.++||||+||++|+|++|+.||.+......  ...  
T Consensus       229 ~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~  308 (371)
T 3q60_A          229 PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS  308 (371)
T ss_dssp             TTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCC
T ss_pred             CCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhh
Confidence            4688999999988                            37889999999999999999999987633211  000  


Q ss_pred             -HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         50 -ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        50 -i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                       ............+..+++++++||.+||+.+|++||++.++++||||..+.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          309 LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             TTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             hhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence             011111222223347899999999999999999999999999999997754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.77  E-value=5e-19  Score=140.44  Aligned_cols=100  Identities=30%  Similarity=0.502  Sum_probs=81.9

Q ss_pred             CCCeEEEEecCCC-------------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~   44 (205)
                      .+|++||+|||++                                     |+.++||||+||++|||++|++||.+.+..
T Consensus       197 ~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~  276 (412)
T 2vd5_A          197 RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA  276 (412)
T ss_dssp             TTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             CCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH
Confidence            4689999999987                                     156799999999999999999999999998


Q ss_pred             HHHHHHHhCC--CCCCCCcCCCCCHHHHHHHHHhcccCcCCCC---CcccccccchhhhcccCC
Q psy14043         45 ETRAHISVAD--YSFPPEQCGHISVPARELIGQLLNTHADKRP---TAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        45 ~~~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~~l~~~~~~~~~~~~  103 (205)
                      +.+..|.+..  ..+|. ....+++++++||.+||. +|.+|+   ++.++++||||..+.+..
T Consensus       277 ~~~~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~  338 (412)
T 2vd5_A          277 ETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDG  338 (412)
T ss_dssp             HHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTT
T ss_pred             HHHHHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence            8888887533  22331 223689999999999999 999984   899999999998876544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.76  E-value=6.9e-19  Score=134.52  Aligned_cols=99  Identities=31%  Similarity=0.477  Sum_probs=79.8

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||++                              ++.++||||+||++|+|++|.+||.+....+....+.
T Consensus       137 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  216 (311)
T 4agu_A          137 KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR  216 (311)
T ss_dssp             TTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            4688999999987                              2788999999999999999999999988877666554


Q ss_pred             hCCC-------------------CCCCC--------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 VADY-------------------SFPPE--------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 ~~~~-------------------~~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....                   ..+..        ....+++++.+||.+||..+|.+||++.++++||||..+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          217 KTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             HHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence            3211                   11100        1135889999999999999999999999999999998754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.76  E-value=6.3e-19  Score=136.04  Aligned_cols=98  Identities=27%  Similarity=0.444  Sum_probs=78.2

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++|.+||.+.+..+....+.
T Consensus       159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (331)
T 4aaa_A          159 QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM  238 (331)
T ss_dssp             TTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            4678999999987                              2678999999999999999999999888777666554


Q ss_pred             hCCCC-------------------CCC--------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VADYS-------------------FPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~-------------------~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....                   .+.        .....+++++++||.+||+.+|.+||++.++++||||...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          239 MCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             HHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             HHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            31110                   010        0123578999999999999999999999999999999653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.76  E-value=3e-19  Score=142.16  Aligned_cols=97  Identities=32%  Similarity=0.599  Sum_probs=81.1

Q ss_pred             CCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHH
Q psy14043          3 GAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i   50 (205)
                      ++.+||+|||++.                               +.++||||+||++|+|++|.+||.+... ......+
T Consensus       278 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i  357 (419)
T 3i6u_A          278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI  357 (419)
T ss_dssp             SCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH
T ss_pred             cceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH
Confidence            3469999999982                               4589999999999999999999976533 3455666


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+...+.+..+..+++++++||.+||+.+|.+||++.++++|||+...
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            6676666665566799999999999999999999999999999999653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.76  E-value=7.1e-19  Score=136.54  Aligned_cols=98  Identities=21%  Similarity=0.367  Sum_probs=77.1

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ++.+||+|||++                          ++.++|||||||++|||++|.+||.+.+..+....+......
T Consensus       178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  257 (355)
T 2eu9_A          178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP  257 (355)
T ss_dssp             CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            578999999988                          388899999999999999999999988777666555442222


Q ss_pred             CCCC----------------------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         57 FPPE----------------------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        57 ~~~~----------------------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .|..                                        .....++++.+||.+||..||.+||++.++++||||
T Consensus       258 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f  337 (355)
T 2eu9_A          258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF  337 (355)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGG
T ss_pred             CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence            1110                                        001124578899999999999999999999999999


Q ss_pred             hhcc
Q psy14043         97 AEIA  100 (205)
Q Consensus        97 ~~~~  100 (205)
                      ....
T Consensus       338 ~~~~  341 (355)
T 2eu9_A          338 AGLT  341 (355)
T ss_dssp             GGCC
T ss_pred             cCCC
Confidence            8753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.75  E-value=1.2e-18  Score=131.05  Aligned_cols=94  Identities=31%  Similarity=0.509  Sum_probs=82.9

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++.                             +.++|+||+||++|+|++|..||......+....+..
T Consensus       146 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  225 (276)
T 2h6d_A          146 AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG  225 (276)
T ss_dssp             TTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc
Confidence            36789999999872                             4689999999999999999999999888888888887


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....+.    .++++++++|.+||+.+|.+||++.++++|||+...
T Consensus       226 ~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          226 GVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             CcccCch----hcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence            7665554    579999999999999999999999999999999764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.75  E-value=6.2e-19  Score=132.72  Aligned_cols=94  Identities=31%  Similarity=0.610  Sum_probs=73.0

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++.                             +.++||||+||++|+|++|++||......+....+..
T Consensus       147 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  226 (278)
T 3cok_A          147 RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL  226 (278)
T ss_dssp             TTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS
T ss_pred             CCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh
Confidence            46789999999872                             6689999999999999999999987765555555444


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....+    ..++++++++|.+||..+|++||++.++++|||+...
T Consensus       227 ~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          227 ADYEMP----SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             SCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             cccCCc----cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            433333    3589999999999999999999999999999999653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.75  E-value=1.4e-18  Score=131.35  Aligned_cols=95  Identities=22%  Similarity=0.333  Sum_probs=73.3

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~   49 (205)
                      ++.+||+|||++                                ++.++||||+||++|+|++|..||.. .........
T Consensus       146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  225 (290)
T 3fme_A          146 LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ  225 (290)
T ss_dssp             TCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH
T ss_pred             CCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH
Confidence            578999999987                                25689999999999999999999986 344444444


Q ss_pred             HHhC-CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         50 ISVA-DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      +... ....+   ...+++++++||.+||+.+|.+||++.++++||||....
T Consensus       226 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~  274 (290)
T 3fme_A          226 VVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  274 (290)
T ss_dssp             HHHSCCCCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HhccCCCCcc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence            4333 33222   236899999999999999999999999999999997643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.75  E-value=1.6e-18  Score=131.26  Aligned_cols=95  Identities=19%  Similarity=0.295  Sum_probs=76.3

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                          ++.++||||+||++|+|++|..||.+... ......+....
T Consensus       167 ~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~  246 (290)
T 1t4h_A          167 PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV  246 (290)
T ss_dssp             TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC
T ss_pred             CCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC
Confidence            3688999999988                          27789999999999999999999987544 44455544432


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .  +.......++++++||.+||+.+|.+||++.++++||||..
T Consensus       247 ~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          247 K--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             C--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             C--ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            2  22223357899999999999999999999999999999965

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.75  E-value=1.5e-18  Score=132.84  Aligned_cols=98  Identities=19%  Similarity=0.311  Sum_probs=84.4

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                                ++.++|||||||++|+|++|+.||.+.+..+....
T Consensus       151 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~  230 (311)
T 3ork_A          151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ  230 (311)
T ss_dssp             TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            4678999999987                                26789999999999999999999999888887777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.......+......+++++.++|.+||+.+|.+||+..+++.++|+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            77665554444455789999999999999999999999999999998653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.75  E-value=2.6e-18  Score=135.58  Aligned_cols=81  Identities=20%  Similarity=0.298  Sum_probs=64.5

Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         17 PSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .++|||||||++|||++|++||.+.. ....+..+.......+.  ....++++++||.+||..+|.+||++.++++|||
T Consensus       246 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~  323 (390)
T 2zmd_A          246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  323 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             ChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCC--CccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence            46899999999999999999998753 33455555544333222  2246889999999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      +...
T Consensus       324 ~~~~  327 (390)
T 2zmd_A          324 VQIQ  327 (390)
T ss_dssp             HHSC
T ss_pred             cccc
Confidence            9754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.75  E-value=1.2e-18  Score=137.42  Aligned_cols=87  Identities=22%  Similarity=0.306  Sum_probs=62.6

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC-------------------------------------
Q psy14043         15 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF-------------------------------------   57 (205)
Q Consensus        15 ~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------------------------------   57 (205)
                      |+.++||||+||++|+|++|++||.+.+..+....+.......                                     
T Consensus       214 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (389)
T 3gni_B          214 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPS  293 (389)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------
T ss_pred             CCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccc
Confidence            3678999999999999999999998765554443332221110                                     


Q ss_pred             -----CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         58 -----PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        58 -----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                           .......+++++++||.+||+.||.+||++.++++||||.....
T Consensus       294 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          294 NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             cCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence                 00122357899999999999999999999999999999987654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.75  E-value=8.8e-19  Score=135.13  Aligned_cols=98  Identities=22%  Similarity=0.326  Sum_probs=77.1

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ++.+||+|||++                          ++.++|||||||++|||++|..||.+.+..+....+......
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  252 (339)
T 1z57_A          173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP  252 (339)
T ss_dssp             CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCS
T ss_pred             CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence            567999999987                          388999999999999999999999988877666555432222


Q ss_pred             CCCC----------------------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         57 FPPE----------------------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        57 ~~~~----------------------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      .|..                                        .....++++.+||.+||..||.+||++.++++||||
T Consensus       253 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f  332 (339)
T 1z57_A          253 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF  332 (339)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGG
T ss_pred             CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHH
Confidence            1110                                        001235678899999999999999999999999999


Q ss_pred             hhcc
Q psy14043         97 AEIA  100 (205)
Q Consensus        97 ~~~~  100 (205)
                      ..+.
T Consensus       333 ~~~~  336 (339)
T 1z57_A          333 DLLK  336 (339)
T ss_dssp             GGGG
T ss_pred             HHHh
Confidence            7653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.75  E-value=3.3e-18  Score=133.67  Aligned_cols=93  Identities=32%  Similarity=0.543  Sum_probs=74.3

Q ss_pred             eEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHH
Q psy14043          5 VLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDES----EEETRAHIS   51 (205)
Q Consensus         5 ~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~----~~~~~~~i~   51 (205)
                      .+||+|||++.                             +.++||||+||++|+|++|++||.+..    .......+.
T Consensus       156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  235 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL  235 (361)
T ss_dssp             CEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred             eEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence            49999999872                             234899999999999999999998643    345566666


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....++..  ..+++++++||.+||..+|.+||++.++++||||...
T Consensus       236 ~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          236 SVKYSIPDD--IRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             TTCCCCCTT--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             cCCCCCCCc--CCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            655555432  3589999999999999999999999999999999653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.75  E-value=1.7e-18  Score=133.33  Aligned_cols=97  Identities=20%  Similarity=0.354  Sum_probs=76.0

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~   48 (205)
                      .++.+||+|||++.                                +.++||||+||++|+|++|..||.+.... ....
T Consensus       140 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  219 (323)
T 3tki_A          140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS  219 (323)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH
T ss_pred             CCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence            35789999999881                                45799999999999999999999876543 2233


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .........+  .+..+++++++||.+||..+|.+||++.++++|+|+....
T Consensus       220 ~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          220 DWKEKKTYLN--PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             HHHTTCTTST--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHhcccccCC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence            3333222222  2346899999999999999999999999999999997643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.75  E-value=1e-18  Score=134.39  Aligned_cols=96  Identities=32%  Similarity=0.611  Sum_probs=79.2

Q ss_pred             CeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHH
Q psy14043          4 AVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHIS   51 (205)
Q Consensus         4 ~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~~i~   51 (205)
                      +.+||+|||++                               ++.++|||||||++|+|++|..||.+.... .....+.
T Consensus       154 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  233 (322)
T 2ycf_A          154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT  233 (322)
T ss_dssp             CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH
T ss_pred             CeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH
Confidence            45999999988                               256899999999999999999999765332 3555666


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+...+.+..+..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             hCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            666655544455789999999999999999999999999999999653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.74  E-value=5.5e-18  Score=130.30  Aligned_cols=97  Identities=24%  Similarity=0.351  Sum_probs=80.8

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++.                                  +.++|||||||++|+|++|..||.+.......
T Consensus       164 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  243 (326)
T 2x7f_A          164 ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL  243 (326)
T ss_dssp             TTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             CCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            36789999999872                                  45799999999999999999999988877776


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+......  ......+++.+++||.+||..+|.+||++.++++|||+....
T Consensus       244 ~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          244 FLIPRNPAP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             HHHHHSCCC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             HHhhcCccc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence            666654432  222346899999999999999999999999999999997643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.74  E-value=2.3e-18  Score=132.64  Aligned_cols=97  Identities=27%  Similarity=0.432  Sum_probs=73.0

Q ss_pred             CeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHH--
Q psy14043          4 AVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHIS--   51 (205)
Q Consensus         4 ~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~i~--   51 (205)
                      +.+||+|||++                             ++.++||||+||++|+|++|..||.. ....+.+..+.  
T Consensus       168 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~  247 (330)
T 3nsz_A          168 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV  247 (330)
T ss_dssp             TEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred             CEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHh
Confidence            38999999998                             27789999999999999999999954 33333333221  


Q ss_pred             -----------hCCCCCCC--------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 -----------VADYSFPP--------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 -----------~~~~~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                                 ......++                    .....+++++++||.+||+.||.+||++.++++||||..+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             HCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                       11111111                    11123799999999999999999999999999999998764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.74  E-value=5e-18  Score=131.91  Aligned_cols=87  Identities=20%  Similarity=0.237  Sum_probs=68.1

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--C----------------------CCCC----CcCCCCCH
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD--Y----------------------SFPP----EQCGHISV   67 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~--~----------------------~~~~----~~~~~~~~   67 (205)
                      +.++||||+||++|+|++|++||.+.+..+.+..+....  +                      ..+.    .....+++
T Consensus       201 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (353)
T 2b9h_A          201 SRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNP  280 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCH
Confidence            667999999999999999999999888766655543210  0                      0000    01236899


Q ss_pred             HHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         68 PARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        68 ~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      ++++||.+||..||++||++.++++|||+.....+
T Consensus       281 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          281 KGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             HHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence            99999999999999999999999999999876543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.74  E-value=2.4e-18  Score=134.27  Aligned_cols=101  Identities=18%  Similarity=0.262  Sum_probs=80.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++||||+||++|+|++|++||.+.+..+....+..
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  248 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE  248 (362)
T ss_dssp             TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            4688999999998                             27789999999999999999999999887777666643


Q ss_pred             CCC------------------------CCCC----CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         53 ADY------------------------SFPP----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        53 ~~~------------------------~~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      ...                        ..+.    ......++.+.+||.+||+.+|.+||++.++++||||.....+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  326 (362)
T 3pg1_A          249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDP  326 (362)
T ss_dssp             HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred             HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCc
Confidence            111                        0111    1123568999999999999999999999999999999876543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.74  E-value=4.6e-19  Score=139.20  Aligned_cols=91  Identities=19%  Similarity=0.307  Sum_probs=71.3

Q ss_pred             CCCeEEEEecCCC------------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEE   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~   45 (205)
                      .++.+||+|||++                                    |+.++|||||||++|||++|+.||.+.+..+
T Consensus       241 ~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~  320 (377)
T 3byv_A          241 QRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG  320 (377)
T ss_dssp             TTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------C
T ss_pred             CCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccccc
Confidence            4688999999986                                    4578999999999999999999997665443


Q ss_pred             HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         46 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        46 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....+..        ....+++++++||.+||..+|.+||++.++++||||..+.
T Consensus       321 ~~~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  367 (377)
T 3byv_A          321 GSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  367 (377)
T ss_dssp             CSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred             chhhhhh--------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence            3333222        1236899999999999999999999999999999997643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.74  E-value=6.2e-18  Score=131.87  Aligned_cols=97  Identities=23%  Similarity=0.338  Sum_probs=76.2

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-----
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-----   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~-----   49 (205)
                      .++.+||+|||++                           ++.++||||+||++|+|++|..||...+..+....     
T Consensus       167 ~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  246 (360)
T 3eqc_A          167 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV  246 (360)
T ss_dssp             TTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---
T ss_pred             CCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccc
Confidence            4678999999988                           37789999999999999999999987665543222     


Q ss_pred             -------------------------------------HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 -------------------------------------ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 -------------------------------------i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                                           +.....  +......+++++++||.+||+.+|.+||++.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          247 EGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ---------------------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                                                 222211  11112347899999999999999999999999999


Q ss_pred             cchhhhcc
Q psy14043         93 VAWFAEIA  100 (205)
Q Consensus        93 ~~~~~~~~  100 (205)
                      |||+....
T Consensus       325 hp~~~~~~  332 (360)
T 3eqc_A          325 HAFIKRSD  332 (360)
T ss_dssp             SHHHHHHH
T ss_pred             ChHhhcch
Confidence            99997654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.74  E-value=4.1e-18  Score=137.00  Aligned_cols=87  Identities=26%  Similarity=0.347  Sum_probs=61.4

Q ss_pred             CcchhHHHHHHHHHHHHc-----------CCCCCCCCCH--------------------HHHHHHHHhC--CC-------
Q psy14043         16 GPSTDMWSLGVLLYILLS-----------GVSPFLDESE--------------------EETRAHISVA--DY-------   55 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-----------g~~pf~~~~~--------------------~~~~~~i~~~--~~-------   55 (205)
                      +.++|||||||++|||++           |+++|.+.+.                    .+.+..|...  .+       
T Consensus       262 ~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~  341 (458)
T 3rp9_A          262 TEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEA  341 (458)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             CcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhh
Confidence            778999999999999998           7888876542                    2222222210  00       


Q ss_pred             -----------CCC-------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         56 -----------SFP-------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        56 -----------~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                                 .++       .......++++.+||.+||..||.+|+++.++++||||..+...
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          342 LEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             SSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred             cCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence                       000       11224579999999999999999999999999999999876543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.74  E-value=4e-18  Score=132.21  Aligned_cols=99  Identities=25%  Similarity=0.486  Sum_probs=82.2

Q ss_pred             CCCeEEEEecCCCC----------------------------Cc-chhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GP-STDMWSLGVLLYILLSGVSPFLDESE-EETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~-~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i~   51 (205)
                      .++.+||+|||.+.                            +. ++||||+||++|+|++|..||.+... .+....+.
T Consensus       187 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~  266 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR  266 (348)
T ss_dssp             TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHT
T ss_pred             CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh
Confidence            46789999999882                            13 89999999999999999999988766 77778887


Q ss_pred             hCCCCCCCCc---------------CCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         52 VADYSFPPEQ---------------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        52 ~~~~~~~~~~---------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .....++...               ...+++++++||.+||..+|.+||++.++++||||....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            7666555311               146899999999999999999999999999999997643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.74  E-value=7.8e-18  Score=128.25  Aligned_cols=95  Identities=26%  Similarity=0.369  Sum_probs=81.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|||||||++|+|++|.+||......+....+..
T Consensus       154 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  233 (303)
T 3a7i_A          154 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK  233 (303)
T ss_dssp             TTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc
Confidence            4678999999987                             26789999999999999999999998888777777766


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....   ....+++++++||.+||..+|.+||++.++++|+|+...
T Consensus       234 ~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          234 NNPPT---LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             SCCCC---CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             CCCCC---CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            54322   223689999999999999999999999999999999654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.74  E-value=6.2e-18  Score=131.14  Aligned_cols=81  Identities=21%  Similarity=0.317  Sum_probs=62.9

Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         17 PSTDMWSLGVLLYILLSGVSPFLDESE-EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .++||||+||++|+|++|..||..... ...+..+.......  ......++++++||.+||+.+|.+||++.++++|||
T Consensus       199 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~  276 (343)
T 3dbq_A          199 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  276 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC--CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             chhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc--CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence            468999999999999999999986433 33444444322221  122356789999999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      +...
T Consensus       277 ~~~~  280 (343)
T 3dbq_A          277 VQIQ  280 (343)
T ss_dssp             HHSC
T ss_pred             cccc
Confidence            9753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=5.1e-18  Score=132.28  Aligned_cols=95  Identities=35%  Similarity=0.580  Sum_probs=78.5

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC----CHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE----SEEE   45 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~----~~~~   45 (205)
                      .++.+||+|||++                                ++.++|||||||++|+|++|..||...    ...+
T Consensus       194 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~  273 (355)
T 1vzo_A          194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE  273 (355)
T ss_dssp             TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH
T ss_pred             CCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHH
Confidence            4678999999977                                156899999999999999999999743    3445


Q ss_pred             HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         46 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        46 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      +...+......++.    .+++.+++||.+||..+|.+||     ++.++++|+|+....
T Consensus       274 ~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          274 ISRRILKSEPPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             HHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHhccCCCCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence            56666665555543    6899999999999999999999     899999999997653

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.73  E-value=8.5e-18  Score=128.72  Aligned_cols=97  Identities=24%  Similarity=0.384  Sum_probs=78.8

Q ss_pred             CCCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLSGVSPFLD-ESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~   47 (205)
                      .++.+||+|||++.                                 +.++||||+||++|+|++|..||.. ....+..
T Consensus       160 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  239 (318)
T 2dyl_A          160 ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL  239 (318)
T ss_dssp             TTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred             CCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH
Confidence            46789999999882                                 4579999999999999999999986 4555666


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+........+ ....+++++++||.+||..+|.+||++.++++|||+...
T Consensus       240 ~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          240 TKVLQEEPPLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             HHHHHSCCCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHhccCCCCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            666655443222 223589999999999999999999999999999999764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.73  E-value=1.5e-18  Score=135.70  Aligned_cols=97  Identities=23%  Similarity=0.430  Sum_probs=69.6

Q ss_pred             CeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHH
Q psy14043          4 AVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES------EEETRAHIS   51 (205)
Q Consensus         4 ~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~------~~~~~~~i~   51 (205)
                      +.+||+|||++                          ++.++|||||||++|+|++|..||.+.+      ..+.+..+.
T Consensus       175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII  254 (373)
T ss_dssp             EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred             ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence            47999999988                          3889999999999999999999997653      222233322


Q ss_pred             hCCCCCCC--------------------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPP--------------------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~--------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......|.                                      ......++++++||.+||+.||.+||++.++++|
T Consensus       255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            21111110                                      0011346788999999999999999999999999


Q ss_pred             chhhhcc
Q psy14043         94 AWFAEIA  100 (205)
Q Consensus        94 ~~~~~~~  100 (205)
                      |||....
T Consensus       335 p~f~~~~  341 (373)
T 1q8y_A          335 PWLKDTL  341 (373)
T ss_dssp             GGGTTCT
T ss_pred             hhhhccc
Confidence            9998754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.73  E-value=6.3e-18  Score=127.21  Aligned_cols=95  Identities=28%  Similarity=0.392  Sum_probs=82.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++||||+||++|+|++|..||...+..+....+..
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~  230 (279)
T 2w5a_A          151 GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE  230 (279)
T ss_dssp             SSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh
Confidence            3678999999987                             26789999999999999999999999888888888877


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      +.....   ...++++++++|.+||..+|.+||++.++++|+|+..-
T Consensus       231 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          231 GKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             TCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             cccccC---CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            655322   23689999999999999999999999999999998654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.73  E-value=7.2e-18  Score=128.27  Aligned_cols=98  Identities=24%  Similarity=0.342  Sum_probs=81.5

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++                                  ++.++||||+||++|+|++|..||...+.....
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  231 (302)
T 2j7t_A          152 LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL  231 (302)
T ss_dssp             TTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             CCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH
Confidence            3688999999975                                  256899999999999999999999988888777


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ..+........ .....++.+++++|.+||..+|.+||++.++++|||+....
T Consensus       232 ~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          232 LKIAKSDPPTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHhccCCccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            77766543221 12235799999999999999999999999999999997754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.72  E-value=1.4e-17  Score=127.36  Aligned_cols=97  Identities=24%  Similarity=0.269  Sum_probs=79.9

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++||||+||++|+|++|..||...........+..
T Consensus       160 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  239 (314)
T 3com_A          160 TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT  239 (314)
T ss_dssp             TTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc
Confidence            4688999999988                             27789999999999999999999998877766666555


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...... .....+++++.+||.+||..+|.+||++.++++|||+...
T Consensus       240 ~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          240 NPPPTF-RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             SCCCCC-SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             CCCccc-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence            432211 1223578999999999999999999999999999999764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.72  E-value=2e-18  Score=132.21  Aligned_cols=91  Identities=22%  Similarity=0.292  Sum_probs=72.2

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++                           ++.++||||+||++|||++|..||.+..   ....+.... 
T Consensus       193 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~-  268 (311)
T 3p1a_A          193 RGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGY-  268 (311)
T ss_dssp             GGCEEECCCTTCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTC-
T ss_pred             CCCEEEccceeeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccC-
Confidence            578999999987                           2678999999999999999977765432   233333332 


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                       .+......+++++++||.+||+.+|++||++.++++|||+++
T Consensus       269 -~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          269 -LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             -CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             -CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence             222333468999999999999999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.72  E-value=4.5e-18  Score=130.93  Aligned_cols=99  Identities=23%  Similarity=0.366  Sum_probs=74.4

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~   48 (205)
                      .++.+||+|||++                                ++.++|||||||++|+|++|..||.+.... +.+.
T Consensus       161 ~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  240 (327)
T 3aln_A          161 RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT  240 (327)
T ss_dssp             TTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C
T ss_pred             CCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH
Confidence            4688999999988                                256899999999999999999999864322 2222


Q ss_pred             HHHhCC-CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         49 HISVAD-YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        49 ~i~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+..+. ..++......+++++++||.+||..+|.+||++.++++|||+....
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          241 QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            222222 2223333346899999999999999999999999999999996543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.72  E-value=2.1e-18  Score=135.84  Aligned_cols=94  Identities=24%  Similarity=0.358  Sum_probs=69.5

Q ss_pred             CeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHH
Q psy14043          4 AVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES------EEETRAHIS   51 (205)
Q Consensus         4 ~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~------~~~~~~~i~   51 (205)
                      ..+||+|||++                          |+.++|||||||++|+|++|.+||.+.+      ....+..+.
T Consensus       233 ~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~  312 (397)
T 1wak_A          233 LKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII  312 (397)
T ss_dssp             CCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHH
T ss_pred             cceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHH
Confidence            47999999988                          4889999999999999999999997644      223333332


Q ss_pred             hCCCCCCC--------------------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPP--------------------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~--------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......+.                                      ......++++++||.+||+.+|.+||++.++++|
T Consensus       313 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          313 ELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             HHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             HhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            21111000                                      0001234678899999999999999999999999


Q ss_pred             chhh
Q psy14043         94 AWFA   97 (205)
Q Consensus        94 ~~~~   97 (205)
                      |||.
T Consensus       393 p~~~  396 (397)
T 1wak_A          393 PWLN  396 (397)
T ss_dssp             GGGG
T ss_pred             cccc
Confidence            9985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.72  E-value=2.8e-17  Score=131.28  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=36.9

Q ss_pred             CCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCC
Q psy14043         63 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN  103 (205)
Q Consensus        63 ~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  103 (205)
                      ..+++++++||.+||+.||.+||++.++++||||..+....
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  372 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK  372 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence            45899999999999999999999999999999998875543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.71  E-value=1.3e-17  Score=125.15  Aligned_cols=97  Identities=20%  Similarity=0.354  Sum_probs=76.0

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHH
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~   48 (205)
                      .++.+||+|||.+.                                +.++||||+||++|+|++|..||.+.... ....
T Consensus       140 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  219 (276)
T 2yex_A          140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS  219 (276)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH
T ss_pred             cCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH
Confidence            35889999999871                                45799999999999999999999876543 2333


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .+.......+  .+..+++++++||.+||..+|.+||++.++++|+|+....
T Consensus       220 ~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          220 DWKEKKTYLN--PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             HHHTTCTTST--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HhhhcccccC--chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence            3333322222  2236899999999999999999999999999999997643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.71  E-value=8.4e-18  Score=129.20  Aligned_cols=90  Identities=34%  Similarity=0.604  Sum_probs=74.2

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++.                            +.++|||||||++|+|++|+.||....      .+...
T Consensus       185 ~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~  258 (320)
T 3a99_A          185 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRG  258 (320)
T ss_dssp             TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHC
T ss_pred             CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcc
Confidence            46899999999872                            567899999999999999999996532      23333


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ...++.    .+++++++||.+||..+|.+||++.++++|||+.....
T Consensus       259 ~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          259 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             CCCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             cccccc----cCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            333332    68999999999999999999999999999999987654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.71  E-value=1.1e-17  Score=127.11  Aligned_cols=84  Identities=24%  Similarity=0.360  Sum_probs=65.3

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC-C-----CCcCCCCCHHHHHHHHHhcccCcCCCCCccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF-P-----PEQCGHISVPARELIGQLLNTHADKRPTAGQ   89 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~   89 (205)
                      +.++|||||||++|+|++|..||.+................. .     ......++++++++|.+||+.+|.+||++.+
T Consensus       205 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  284 (303)
T 2vwi_A          205 DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE  284 (303)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHH
Confidence            778999999999999999999998876665555444332211 1     1123468899999999999999999999999


Q ss_pred             ccccchhhhc
Q psy14043         90 LLQVAWFAEI   99 (205)
Q Consensus        90 ~l~~~~~~~~   99 (205)
                      +++||||...
T Consensus       285 ll~h~~~~~~  294 (303)
T 2vwi_A          285 LLRHKFFQKA  294 (303)
T ss_dssp             HHTSTTC---
T ss_pred             HhhChhhhcC
Confidence            9999999764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.71  E-value=1.7e-17  Score=127.47  Aligned_cols=94  Identities=16%  Similarity=0.256  Sum_probs=74.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++||||+||++|+|++ |.+||.+.+..+....
T Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~  251 (323)
T 3qup_A          172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY  251 (323)
T ss_dssp             TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHH
Confidence            3678999999988                               2779999999999999999 9999999888888777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-------cccccccchhhh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-------AGQLLQVAWFAE   98 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-------~~~~l~~~~~~~   98 (205)
                      +........   ...+++++++||.+||..+|.+||+       +.+++.|+|+..
T Consensus       252 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          252 LIGGNRLKQ---PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             HHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred             HhcCCCCCC---CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence            776543222   2368999999999999999999999       667778888754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.71  E-value=7.6e-18  Score=130.33  Aligned_cols=88  Identities=35%  Similarity=0.565  Sum_probs=71.4

Q ss_pred             CCCeEEEEecCCCC-----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++.                             +.++|||||||++|+|++|..||.....      ...
T Consensus       165 ~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~  238 (335)
T 3dls_A          165 EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVE  238 (335)
T ss_dssp             TTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTT
T ss_pred             CCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHh
Confidence            46789999999882                             6688999999999999999999975221      112


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .....+    ..+++++++||.+||..+|.+||++.++++|||+...
T Consensus       239 ~~~~~~----~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          239 AAIHPP----YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             TCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             hccCCC----cccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            222222    2589999999999999999999999999999999753

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.70  E-value=1.4e-17  Score=126.21  Aligned_cols=95  Identities=28%  Similarity=0.471  Sum_probs=73.0

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-ETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|||||||++|+|++|+.||...... ......
T Consensus       159 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (295)
T 2clq_A          159 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV  238 (295)
T ss_dssp             TCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH
T ss_pred             CCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh
Confidence            688999999987                               256899999999999999999999754332 222222


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...  ...+..+..+++++++||.+||..+|++||++.++++|+|+...
T Consensus       239 ~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          239 GMF--KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             HHH--CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             ccc--cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence            111  11122234689999999999999999999999999999999653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.70  E-value=3.1e-18  Score=136.06  Aligned_cols=90  Identities=19%  Similarity=0.303  Sum_probs=73.5

Q ss_pred             CCCeEEEEecCCCC-----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSSA-----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~   46 (205)
                      .++.+||+|||++.                                   +.++|||||||++|||++|+.||.+.+..+.
T Consensus       246 ~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~  325 (413)
T 3dzo_A          246 QRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG  325 (413)
T ss_dssp             TTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC
T ss_pred             cCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence            46789999999962                                   3489999999999999999999987654433


Q ss_pred             HHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         47 RAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        47 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...+..        ....+++++++||.+||+.+|.+||++.++++|+|+..+
T Consensus       326 ~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          326 SEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             SGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            332221        122588999999999999999999999999999999765

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.70  E-value=4.8e-17  Score=124.48  Aligned_cols=89  Identities=18%  Similarity=0.283  Sum_probs=73.3

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||++                             ++.++|||||||++|+|++|..||.+.+..+....+..
T Consensus       174 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~  253 (309)
T 3p86_A          174 KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF  253 (309)
T ss_dssp             TTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH
T ss_pred             CCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            3578999999987                             27789999999999999999999999888887777654


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ......  ....+++++++||.+||..+|.+||++.++++
T Consensus       254 ~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          254 KCKRLE--IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             SCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCC--CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            333222  22368999999999999999999999999887

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.70  E-value=4.4e-17  Score=122.05  Aligned_cols=89  Identities=26%  Similarity=0.462  Sum_probs=75.3

Q ss_pred             CCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++                           ++.++||||+||++|+|++|+.||.+.+.......+.....
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  231 (271)
T 3dtc_A          152 NKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL  231 (271)
T ss_dssp             SCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCC
T ss_pred             CcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCC
Confidence            678999999998                           37789999999999999999999999888877777766554


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+.  ...++++++++|.+||+.+|.+||++.+++++
T Consensus       232 ~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          232 ALPI--PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            3332  24689999999999999999999999998765

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.70  E-value=4.2e-17  Score=124.81  Aligned_cols=82  Identities=20%  Similarity=0.302  Sum_probs=63.1

Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         17 PSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .++|||||||++|+|++|..||.... .......+........  .....+++++++|.+||..+|.+||++.++++|||
T Consensus       218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~  295 (313)
T 3cek_A          218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  295 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             chHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence            37999999999999999999997653 3334444443322211  22356899999999999999999999999999999


Q ss_pred             hhhcc
Q psy14043         96 FAEIA  100 (205)
Q Consensus        96 ~~~~~  100 (205)
                      +....
T Consensus       296 ~~~~~  300 (313)
T 3cek_A          296 VQIQT  300 (313)
T ss_dssp             HHCC-
T ss_pred             ccCCC
Confidence            97643

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.69  E-value=5.3e-17  Score=126.87  Aligned_cols=78  Identities=13%  Similarity=0.112  Sum_probs=69.3

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceecee-cccceeeEEEEEEcCCCCEEEeecC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS-LQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+...+.+++|+|+++++|+|+.|+.|++||+.++.              ...+ +.+|...|++++|||||++|||||.
T Consensus       267 ~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~--------------~~~~~~~gH~~~V~~v~fSpdg~~laS~S~  332 (365)
T 4h5i_A          267 NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS--------------MSKIFKQAHSFAITEVTISPDSTYVASVSA  332 (365)
T ss_dssp             SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE--------------EEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred             CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc--------------EEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence            345568899999999999999999999999999876              4455 5899999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|+|||+....
T Consensus       333 D~tvrvw~ip~~~  345 (365)
T 4h5i_A          333 ANTIHIIKLPLNY  345 (365)
T ss_dssp             TSEEEEEECCTTT
T ss_pred             CCeEEEEEcCCCC
Confidence            9999999996543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.68  E-value=4.7e-17  Score=127.53  Aligned_cols=89  Identities=22%  Similarity=0.354  Sum_probs=75.7

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               |+.++|||||||++|||++ |..||.+....+....
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~  317 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  317 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            4688999999988                               3778999999999999999 9999999888888777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +..+....   .+..++++++++|.+||+.+|.+||++.+++++
T Consensus       318 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          318 LKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77654321   223689999999999999999999999998864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.68  E-value=2.4e-17  Score=125.77  Aligned_cols=92  Identities=15%  Similarity=0.156  Sum_probs=64.2

Q ss_pred             CCCeEEEEecCCCC---------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC-
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE-   41 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~-   41 (205)
                      +++++||+|||+|.                                       +.++||||+||++|||++|.+||... 
T Consensus       143 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~  222 (303)
T 3hmm_A          143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  222 (303)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCC
T ss_pred             CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccc
Confidence            46899999999971                                       34799999999999999997765321 


Q ss_pred             --------------CHHHHHHHHHhCCCC--CCCCc-CCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         42 --------------SEEETRAHISVADYS--FPPEQ-CGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        42 --------------~~~~~~~~i~~~~~~--~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                                    ...+....+......  +|... ....++.+.+|+.+||+.||++||++.++++.
T Consensus       223 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          223 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                          223344444433322  22110 01133578899999999999999999998764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.68  E-value=6.1e-17  Score=122.03  Aligned_cols=91  Identities=16%  Similarity=0.212  Sum_probs=70.6

Q ss_pred             CCeEEEEecCCCC--------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          3 GAVLKLIDLGSSA--------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      ...+||+|||.+.                          +.++||||+||++|+|++|.+++....   ....+......
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~  246 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLP  246 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCC
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCC
Confidence            4579999999872                          358999999999999999998875443   23444444332


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .   ....+++++++||.+||..+|++||++.++++|||+...
T Consensus       247 ~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          247 R---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             C---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             C---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            1   223689999999999999999999999999999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.68  E-value=4.6e-17  Score=127.45  Aligned_cols=91  Identities=26%  Similarity=0.466  Sum_probs=78.8

Q ss_pred             CeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          4 AVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         4 ~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ..+||+|||++                               ++.++|||||||++|||++ |.+||.+.+..+....+.
T Consensus       221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~  300 (367)
T 3l9p_A          221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  300 (367)
T ss_dssp             CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             ceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            46999999987                               3788999999999999998 999999999988888888


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      .+....++   ..+++++.+||.+||+.+|.+||++.+++++.+..
T Consensus       301 ~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          301 SGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            76543322   36899999999999999999999999999987763

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.68  E-value=4.3e-17  Score=124.65  Aligned_cols=88  Identities=34%  Similarity=0.607  Sum_probs=72.6

Q ss_pred             CCCeEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++.                            +.++||||+||++|+|++|+.||.+.      ..+...
T Consensus       175 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~  248 (312)
T 2iwi_A          175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEA  248 (312)
T ss_dssp             TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHT
T ss_pred             CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HHHhhh
Confidence            47899999999872                            34799999999999999999999653      123334


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ...++.    .+++++++||.+||..+|++||++.++++|+|+...
T Consensus       249 ~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          249 ELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             CCCCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred             ccCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence            444443    689999999999999999999999999999999754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.67  E-value=7.3e-17  Score=120.84  Aligned_cols=89  Identities=26%  Similarity=0.492  Sum_probs=76.4

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++||||+||++|+|++ |.+||.+.+..+....+
T Consensus       141 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~  220 (269)
T 4hcu_A          141 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  220 (269)
T ss_dssp             GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             CCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            3578999999987                              2778999999999999999 99999999998888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........+   ...++++.+++.+||+.+|.+||++.+++++
T Consensus       221 ~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          221 STGFRLYKP---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HTTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcCccCCCC---CcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            776433222   3579999999999999999999999998876

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.67  E-value=1.3e-16  Score=127.52  Aligned_cols=81  Identities=31%  Similarity=0.472  Sum_probs=62.0

Q ss_pred             CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCCCCCCc---CCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ---CGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      +.++||||+||++|||++ |.+||.+....+  ..+.......+...   ...+++++++||.+||+.+|.+||++.+++
T Consensus       217 ~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil  294 (434)
T 2rio_A          217 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL  294 (434)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             chhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHH
Confidence            457999999999999999 999997654433  34444444333211   113458899999999999999999999999


Q ss_pred             ccchhhh
Q psy14043         92 QVAWFAE   98 (205)
Q Consensus        92 ~~~~~~~   98 (205)
                      +|||+..
T Consensus       295 ~hp~f~~  301 (434)
T 2rio_A          295 RHPLFWP  301 (434)
T ss_dssp             TSGGGSC
T ss_pred             hCCccCC
Confidence            9999953

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.67  E-value=1.1e-16  Score=119.86  Aligned_cols=89  Identities=24%  Similarity=0.410  Sum_probs=76.6

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      .++.+||+|||++.                              +.++||||+||++|+|++ |..||......+....+
T Consensus       139 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  218 (268)
T 3sxs_A          139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV  218 (268)
T ss_dssp             TTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH
Confidence            46789999999882                              678999999999999999 99999998888888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........+   ...++++.+++.+||+.+|.+||++.+++++
T Consensus       219 ~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          219 SQGHRLYRP---HLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HTTCCCCCC---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCCC---CcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            766543333   3579999999999999999999999999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.67  E-value=1.6e-16  Score=125.02  Aligned_cols=89  Identities=24%  Similarity=0.358  Sum_probs=76.7

Q ss_pred             CCCeEEEEecCCCC-------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA-------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++.                               +.++|||||||++|+|++ |..||.+.+..+....
T Consensus       226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~  305 (382)
T 3tt0_A          226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  305 (382)
T ss_dssp             TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            36889999999882                               678999999999999999 9999999988888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +........   ...+++++++||.+||+.+|++||++.+++++
T Consensus       306 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          306 LKEGHRMDK---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHTTCCCCC---CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            776543222   23689999999999999999999999999886

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.67  E-value=1.3e-16  Score=128.22  Aligned_cols=88  Identities=20%  Similarity=0.337  Sum_probs=75.5

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              ++.++|||||||++|||++ |..||.+.+..+....+
T Consensus       319 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i  398 (454)
T 1qcf_A          319 ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL  398 (454)
T ss_dssp             TTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             CCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            3678999999998                              2778999999999999999 99999999998888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+... +  .+..+++++.+||.+||..+|++||++.++++
T Consensus       399 ~~~~~~-~--~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          399 ERGYRM-P--RPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHTCCC-C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HcCCCC-C--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            765332 2  12368999999999999999999999988865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.67  E-value=1e-16  Score=120.84  Aligned_cols=88  Identities=22%  Similarity=0.328  Sum_probs=70.7

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++||||+||++|+|++ |.+||.+....+....+.
T Consensus       152 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~  231 (281)
T 1mp8_A          152 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  231 (281)
T ss_dssp             TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             CCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH
Confidence            678999999987                              2668999999999999997 999999888877877777


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......   ....+++++.++|.+||..+|++||++.+++++
T Consensus       232 ~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          232 NGERLP---MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             TTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            654321   223689999999999999999999999988764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.66  E-value=8.9e-17  Score=122.01  Aligned_cols=80  Identities=24%  Similarity=0.502  Sum_probs=65.5

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      +.++||||+||++|+|++   ||.. ....+....+......++.......++.++++|.+||..+|.+||++.++++||
T Consensus       209 ~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  285 (303)
T 1zy4_A          209 NEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG  285 (303)
T ss_dssp             CTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred             cchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence            678999999999999998   5543 334456666666666666655567888999999999999999999999999999


Q ss_pred             hhhh
Q psy14043         95 WFAE   98 (205)
Q Consensus        95 ~~~~   98 (205)
                      |+..
T Consensus       286 ~~~~  289 (303)
T 1zy4_A          286 WLPV  289 (303)
T ss_dssp             CSCC
T ss_pred             CcCC
Confidence            9964

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.66  E-value=1.5e-16  Score=119.88  Aligned_cols=90  Identities=29%  Similarity=0.447  Sum_probs=77.1

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      .++.+||+|||++                              ++.++||||+||++|+|++ |..||...+..+....+
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~  234 (283)
T 3gen_A          155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI  234 (283)
T ss_dssp             TTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             CCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH
Confidence            4678999999988                              2778999999999999998 99999998888888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ........+   ...++.+.++|.+||+.+|.+||++.+++++-
T Consensus       235 ~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L  275 (283)
T 3gen_A          235 AQGLRLYRP---HLASEKVYTIMYSCWHEKADERPTFKILLSNI  275 (283)
T ss_dssp             HTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             hcccCCCCC---CcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            776443332   35789999999999999999999999998763

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.66  E-value=1.2e-16  Score=122.09  Aligned_cols=89  Identities=25%  Similarity=0.373  Sum_probs=75.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++||||+||++|+|++ |..||.+....+....
T Consensus       185 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  264 (314)
T 2ivs_A          185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL  264 (314)
T ss_dssp             TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3678999999987                               2778999999999999999 9999998888777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.......   ....++++++++|.+||+.+|.+||++.+++++
T Consensus       265 ~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          265 LKTGHRME---RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhcCCcCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            76654322   223689999999999999999999999998765

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.66  E-value=1.1e-16  Score=122.30  Aligned_cols=86  Identities=19%  Similarity=0.401  Sum_probs=67.2

Q ss_pred             eEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCCC
Q psy14043          5 VLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE--SEEETRAHISVADYS   56 (205)
Q Consensus         5 ~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~--~~~~~~~~i~~~~~~   56 (205)
                      .+||+|||++                          ++.++||||+||++|+|++|+.||...  ........+..... 
T Consensus       144 ~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-  222 (307)
T 2eva_A          144 VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR-  222 (307)
T ss_dssp             EEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC-
T ss_pred             EEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC-
Confidence            4899999987                          377999999999999999999999754  33334444443322 


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                        ......+++.+++++.+||..+|.+||++.+++++
T Consensus       223 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          223 --PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             --CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence              12234689999999999999999999999998874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.66  E-value=1.8e-16  Score=122.04  Aligned_cols=89  Identities=20%  Similarity=0.354  Sum_probs=75.8

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      .++.+||+|||++                                ++.++||||+||++|+|++ |..||.+....+...
T Consensus       186 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~  265 (325)
T 3kul_A          186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS  265 (325)
T ss_dssp             TTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH
T ss_pred             CCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            4678999999988                                2678999999999999999 999999999988888


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+.......   ....+++++.+||.+||..+|.+||++.++++.
T Consensus       266 ~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~  307 (325)
T 3kul_A          266 SVEEGYRLP---APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV  307 (325)
T ss_dssp             HHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCC---CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            877653221   223689999999999999999999999998764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.66  E-value=7e-17  Score=124.44  Aligned_cols=88  Identities=19%  Similarity=0.300  Sum_probs=74.5

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|||||||++|||++ |..||.+.+..+....+
T Consensus       153 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  232 (327)
T 3poz_A          153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL  232 (327)
T ss_dssp             TTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH
T ss_pred             CCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH
Confidence            578999999987                               3788999999999999999 99999988887777776


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........   ....+.++.+++.+||+.+|.+||++.+++++
T Consensus       233 ~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          233 EKGERLPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HTTCCCCC---CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HcCCCCCC---CccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            65543222   23589999999999999999999999998875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.66  E-value=1.4e-16  Score=122.84  Aligned_cols=88  Identities=19%  Similarity=0.308  Sum_probs=73.9

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|||||||++|+|++ |.+||.+....+....+
T Consensus       153 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~  232 (327)
T 3lzb_A          153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL  232 (327)
T ss_dssp             TTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH
T ss_pred             CCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            578999999998                               2778999999999999999 99999988888777777


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ........   ...+++++.++|.+||..+|.+||++.++++.
T Consensus       233 ~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          233 EKGERLPQ---PPICTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HTTCCCCC---CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCCCC---CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            66543222   23589999999999999999999999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=1.5e-16  Score=120.29  Aligned_cols=90  Identities=22%  Similarity=0.228  Sum_probs=76.6

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++.                                +.++||||+||++|+|++ |..||.+....+....
T Consensus       146 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  225 (287)
T 1u59_A          146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF  225 (287)
T ss_dssp             TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH
T ss_pred             CCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            5789999999872                                678999999999999998 9999998888888887


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +..+....   ....++++++++|.+||..+|.+||++.+++++.+
T Consensus       226 i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          226 IEQGKRME---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHTTCCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HhcCCcCC---CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            77654321   22368999999999999999999999999998754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.66  E-value=6.7e-17  Score=124.39  Aligned_cols=89  Identities=18%  Similarity=0.317  Sum_probs=75.6

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++||||+||++|+|++ |..||.+....+....
T Consensus       150 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  229 (325)
T 3kex_A          150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL  229 (325)
T ss_dssp             SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH
T ss_pred             CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH
Confidence            4688999999988                               2778999999999999999 9999998887777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +........+   ..+++++.+++.+||..+|.+||++.+++++
T Consensus       230 ~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          230 LEKGERLAQP---QICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHTTCBCCCC---TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHcCCCCCCC---CcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7765433222   2578899999999999999999999999876

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.65  E-value=1.6e-16  Score=124.82  Aligned_cols=88  Identities=27%  Similarity=0.409  Sum_probs=74.0

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++||||+||++|||++ |..||.+.+..+....
T Consensus       248 ~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~  327 (377)
T 3cbl_A          248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF  327 (377)
T ss_dssp             TTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHH
T ss_pred             CCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3688999999987                               2668999999999999998 9999999888888777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+.....   +..+++++++||.+||+.+|++||++.++++
T Consensus       328 ~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          328 VEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCC---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            766533211   2368999999999999999999999998875

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.65  E-value=2.5e-17  Score=126.70  Aligned_cols=78  Identities=19%  Similarity=0.357  Sum_probs=59.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++||||+||++|+|++|..|+.  ........+.....  + ......++++++||.+||+.+|.+||++.++++|||
T Consensus       254 ~~~~Di~slG~il~el~~~~~~~~--~~~~~~~~~~~~~~--~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~  328 (332)
T 3qd2_B          254 SHKVDIFSLGLILFELLYSFSTQM--ERVRIITDVRNLKF--P-LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI  328 (332)
T ss_dssp             CTHHHHHHHHHHHHHHHSCCCCHH--HHHHHHHHHHTTCC--C-HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred             cchhhHHHHHHHHHHHHHcCCChh--HHHHHHHHhhccCC--C-cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchh
Confidence            778999999999999999987762  12233333333322  2 112246788999999999999999999999999999


Q ss_pred             hhh
Q psy14043         96 FAE   98 (205)
Q Consensus        96 ~~~   98 (205)
                      |.+
T Consensus       329 f~~  331 (332)
T 3qd2_B          329 FEN  331 (332)
T ss_dssp             CCC
T ss_pred             hhc
Confidence            965

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.65  E-value=2.9e-16  Score=120.44  Aligned_cols=89  Identities=18%  Similarity=0.261  Sum_probs=76.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++||||+||++|+|++ |..||.+.+..+....
T Consensus       173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  252 (322)
T 1p4o_A          173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF  252 (322)
T ss_dssp             TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred             CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH
Confidence            4678999999987                               2778999999999999999 8999999888888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +........   ...++++++++|.+||..+|.+||++.+++++
T Consensus       253 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          253 VMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            776544222   23689999999999999999999999998876

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.65  E-value=4.1e-17  Score=125.21  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=60.1

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC----CHHHHHHHHHhCCCC-------------------CC--CCcCCCCCHHHH
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDE----SEEETRAHISVADYS-------------------FP--PEQCGHISVPAR   70 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~----~~~~~~~~i~~~~~~-------------------~~--~~~~~~~~~~~~   70 (205)
                      +.++||||+||++|||++|+.||...    ...+.+..+....+.                   ++  ......+++.+.
T Consensus       201 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  280 (319)
T 4euu_A          201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT  280 (319)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhH
Confidence            46899999999999999999999643    234455555544331                   11  111123457889


Q ss_pred             HHHHHhcccCcCCCCCcccccccchh
Q psy14043         71 ELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        71 ~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +||.+||+.||++|+++.++++||--
T Consensus       281 ~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          281 PVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             HHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             HHHHHhccCChhhhccHHHhhhccHH
Confidence            99999999999999999999999863

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.65  E-value=2.1e-16  Score=119.46  Aligned_cols=89  Identities=19%  Similarity=0.322  Sum_probs=76.5

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++                                ++.++||||+||++|+|++ |..||.+.+..+....
T Consensus       157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  236 (291)
T 1u46_A          157 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK  236 (291)
T ss_dssp             TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             CCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHH
Confidence            678999999987                                1668999999999999999 9999999988888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.......+.  ...++++++++|.+||..+|.+||++.+++++
T Consensus       237 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          237 IDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHTSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCCCCC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            8766544332  24689999999999999999999999998874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.65  E-value=1.9e-16  Score=120.22  Aligned_cols=95  Identities=20%  Similarity=0.284  Sum_probs=75.5

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++.                              +.++||||+||++|+|++|+.||.+.+..+......
T Consensus       146 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~  225 (294)
T 4eqm_A          146 SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI  225 (294)
T ss_dssp             TTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence            46889999999882                              678999999999999999999999988877655555


Q ss_pred             hCCCC-CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         52 VADYS-FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        52 ~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      ..... .+......+++.+.++|.+||..+|.+||+..+.+.+.+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          226 QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             SSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             hccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence            44332 2222345689999999999999999999977666666664

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.65  E-value=2.1e-16  Score=122.27  Aligned_cols=88  Identities=20%  Similarity=0.365  Sum_probs=75.9

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++||||+||++|+|++ |..||.+.+..+....+
T Consensus       210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  289 (343)
T 1luf_A          210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV  289 (343)
T ss_dssp             GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHH
Confidence            578999999987                               2778999999999999999 99999999888888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+.....   ...++++++++|.+||..+|++||++.+++++
T Consensus       290 ~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          290 RDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCCCcCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            77654322   23689999999999999999999999998764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.65  E-value=1.4e-16  Score=122.58  Aligned_cols=89  Identities=26%  Similarity=0.359  Sum_probs=75.5

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||++                            ++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~  257 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  257 (327)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred             CCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence            578999999987                            2788999999999999998 99999999888887777665


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ...   .....+++++++||.+||..+|.+||++.+++++-
T Consensus       258 ~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L  295 (327)
T 1fvr_A          258 YRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  295 (327)
T ss_dssp             CCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            322   12236899999999999999999999999998763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.65  E-value=1.3e-16  Score=120.46  Aligned_cols=86  Identities=23%  Similarity=0.336  Sum_probs=67.7

Q ss_pred             eEEEEecCCCC----------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHhCC
Q psy14043          5 VLKLIDLGSSA----------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEE--TRAHISVAD   54 (205)
Q Consensus         5 ~~kl~Dfg~~~----------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~--~~~~i~~~~   54 (205)
                      .+||+|||++.                            +.++||||+||++|+|++|..||.......  ....+....
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  246 (287)
T 4f0f_A          167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG  246 (287)
T ss_dssp             CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC
T ss_pred             eEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC
Confidence            39999999882                            678999999999999999999998654333  344444333


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..  ......++++++++|.+||+.+|.+||++.++++
T Consensus       247 ~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          247 LR--PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC--CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            22  2233468999999999999999999999998875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.65  E-value=2.2e-16  Score=118.93  Aligned_cols=88  Identities=20%  Similarity=0.276  Sum_probs=73.2

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++|||||||++|+|++ |+.||......+....+.
T Consensus       149 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~  228 (281)
T 3cc6_A          149 PECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE  228 (281)
T ss_dssp             TTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH
T ss_pred             CCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh
Confidence            578999999987                              2678999999999999998 999998777777766666


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .......   ...+++.+.++|.+||..+|++||++.+++++
T Consensus       229 ~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          229 KGDRLPK---PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCC---CCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            5533222   23589999999999999999999999998865

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.65  E-value=2.3e-16  Score=120.61  Aligned_cols=89  Identities=19%  Similarity=0.252  Sum_probs=74.8

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               ++.++|||||||++|+|++ |.+||.+....+....
T Consensus       182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  261 (313)
T 3brb_A          182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY  261 (313)
T ss_dssp             TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence            4678999999988                               2668999999999999999 9999998888777777


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.......   ....+++++.++|.+||..+|.+||++.+++++
T Consensus       262 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          262 LLHGHRLK---QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHTTCCCC---CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCC---CCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            76654321   223689999999999999999999999998865

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.65  E-value=2.1e-16  Score=126.85  Aligned_cols=88  Identities=22%  Similarity=0.342  Sum_probs=74.7

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+||+|||++                          ++.++|||||||++|||++ |..||.+.+..+....+..+.
T Consensus       324 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~  403 (450)
T 1k9a_A          324 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY  403 (450)
T ss_dssp             TTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC
T ss_pred             CCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            3688999999998                          3789999999999999998 999999888777777777653


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..   ..+..++++++++|.+||..+|.+||++.++++
T Consensus       404 ~~---~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          404 KM---DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            22   122368999999999999999999999998865

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=2.6e-16  Score=117.56  Aligned_cols=88  Identities=26%  Similarity=0.494  Sum_probs=75.1

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++|+||+||++|+|++ |.+||.+....+....+.
T Consensus       140 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~  219 (267)
T 3t9t_A          140 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS  219 (267)
T ss_dssp             GGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             CCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh
Confidence            578999999987                              2668999999999999999 999999988888888887


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .......+   ...++++++++.+||..+|.+||++.+++++
T Consensus       220 ~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          220 TGFRLYKP---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCcCCCC---ccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            76433222   3579999999999999999999999998764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.64  E-value=3.6e-16  Score=118.42  Aligned_cols=87  Identities=21%  Similarity=0.301  Sum_probs=74.1

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++.                                +.++|||||||++|+|++ |+.||.+.+..+....
T Consensus       153 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  232 (291)
T 1xbb_A          153 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  232 (291)
T ss_dssp             TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             CCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            5789999999872                                558999999999999999 9999999888888887


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.......   ....++++++++|.+||..+|.+||++.++++
T Consensus       233 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          233 LEKGERMG---CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHTTCCCC---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            77654321   22368999999999999999999999998875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.64  E-value=2.4e-16  Score=121.36  Aligned_cols=92  Identities=27%  Similarity=0.485  Sum_probs=78.4

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +..+||+|||++                               ++.++|||||||++|+|++ |..||.+....+....+
T Consensus       179 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  258 (327)
T 2yfx_A          179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV  258 (327)
T ss_dssp             TCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             cceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH
Confidence            456999999976                               3788999999999999998 99999998888888877


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      ........+   ..+++.++++|.+||..+|.+||++.+++++.+..
T Consensus       259 ~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          259 TSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            765433222   36899999999999999999999999999998763

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.64  E-value=9.9e-17  Score=128.11  Aligned_cols=82  Identities=26%  Similarity=0.448  Sum_probs=60.3

Q ss_pred             CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      +.++||||+||++|||++ |.+||...........+........ ......+..+++||.+||+.+|.+||++.++++||
T Consensus       207 t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp  285 (432)
T 3p23_A          207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL-HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP  285 (432)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTS-CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCcccc-CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence            447999999999999999 9999976555443333222111111 11123456789999999999999999999999999


Q ss_pred             hhhh
Q psy14043         95 WFAE   98 (205)
Q Consensus        95 ~~~~   98 (205)
                      ||..
T Consensus       286 ~f~~  289 (432)
T 3p23_A          286 FFWS  289 (432)
T ss_dssp             TTCC
T ss_pred             cccC
Confidence            9954

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.64  E-value=4.3e-16  Score=120.30  Aligned_cols=89  Identities=22%  Similarity=0.354  Sum_probs=76.0

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++||||+||++|+|++ |..||.+.+..+....
T Consensus       192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  271 (334)
T 2pvf_A          192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  271 (334)
T ss_dssp             TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH
Confidence            4688999999987                               2778999999999999999 9999999888888887


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.......   ....++++++++|.+||..+|.+||++.+++++
T Consensus       272 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          272 LKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            77654322   223689999999999999999999999998875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=1.9e-16  Score=124.22  Aligned_cols=89  Identities=24%  Similarity=0.422  Sum_probs=71.5

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++                                 ++.++||||+||++|||++ |.+||.+.+..+..
T Consensus       227 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~  306 (373)
T 3c1x_A          227 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT  306 (373)
T ss_dssp             TTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH
T ss_pred             CCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH
Confidence            4678999999988                                 2778999999999999999 78899877766666


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+..+.....+   ..+++++.+++.+||..+|.+||++.+++++
T Consensus       307 ~~~~~~~~~~~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          307 VYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            666665543322   3689999999999999999999999998875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=2.4e-16  Score=122.05  Aligned_cols=92  Identities=22%  Similarity=0.339  Sum_probs=73.3

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++|||||||++|+|++ |..||.+.........
T Consensus       207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  286 (344)
T 1rjb_A          207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK  286 (344)
T ss_dssp             TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHH
Confidence            3678999999988                               2778999999999999998 9999988765544444


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.......+  ....+++++++||.+||..+|.+||++.+++++..
T Consensus       287 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          287 LIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             HHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            444333222  22368999999999999999999999999988644

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.64  E-value=3.5e-16  Score=125.61  Aligned_cols=87  Identities=24%  Similarity=0.348  Sum_probs=74.6

Q ss_pred             CCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++.                              +.++|||||||++|||++ |..||.+....+....+.
T Consensus       316 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  395 (452)
T 1fmk_A          316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  395 (452)
T ss_dssp             GGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             CCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            5789999999982                              778999999999999999 999999999888888877


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+... +  .+..+++.++++|.+||+.+|++||++.++++
T Consensus       396 ~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          396 RGYRM-P--CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             TTCCC-C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCC-C--CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            65322 1  12368999999999999999999999998876

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.64  E-value=1.4e-16  Score=124.06  Aligned_cols=88  Identities=23%  Similarity=0.345  Sum_probs=70.6

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEE-TRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~-~~~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|+|++ |..||.+....+ ....
T Consensus       229 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  308 (359)
T 3vhe_A          229 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  308 (359)
T ss_dssp             GGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             CCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH
Confidence            578999999987                               2779999999999999998 999998865443 3444


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.......   ....+++++.+++.+||+.+|.+||++.++++|
T Consensus       309 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          309 LKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            44332211   123689999999999999999999999999876

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.64  E-value=5.6e-16  Score=116.58  Aligned_cols=88  Identities=19%  Similarity=0.302  Sum_probs=74.5

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++.                              +.++||||+||++|+|++ |..||.+.+..+....+
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  223 (279)
T 1qpc_A          144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL  223 (279)
T ss_dssp             TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             CCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHH
Confidence            46789999999882                              668999999999999999 99999998888888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ........   ...+++++.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          224 ERGYRMVR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcccCCCC---cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            76533222   2368999999999999999999999988875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.63  E-value=4.6e-16  Score=117.03  Aligned_cols=88  Identities=22%  Similarity=0.336  Sum_probs=73.0

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      +++.+||+|||++                          ++.++||||+||++|+|++ |..||...+..+....+....
T Consensus       152 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~  231 (278)
T 1byg_A          152 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY  231 (278)
T ss_dssp             TTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC
T ss_pred             CCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC
Confidence            4688999999987                          2778999999999999998 999999887777777766543


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..   .....++++++++|.+||..+|.+||++.++++
T Consensus       232 ~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          232 KM---DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC---CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            21   222468999999999999999999999998875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.63  E-value=5.4e-16  Score=128.84  Aligned_cols=87  Identities=23%  Similarity=0.242  Sum_probs=75.0

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++                                ++.++|||||||++|||++ |..||.+.+..+....
T Consensus       472 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~  551 (613)
T 2ozo_A          472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF  551 (613)
T ss_dssp             TTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH
T ss_pred             CCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            678999999988                                2778999999999999998 9999999888888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+.....   +..+++++.++|.+||..+|++||++.++++
T Consensus       552 i~~~~~~~~---p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          552 IEQGKRMEC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHTTCCCCC---CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHcCCCCCC---CCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            877643221   2368999999999999999999999988754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.63  E-value=6.1e-16  Score=117.06  Aligned_cols=91  Identities=19%  Similarity=0.386  Sum_probs=69.8

Q ss_pred             CCCeEEEEecCCCC----------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH-HH
Q psy14043          2 NGAVLKLIDLGSSA----------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE-ET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~----------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~-~~   46 (205)
                      +++.+||+|||++.                                  +.++||||+||++|+|++|+.||.+.... ..
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  234 (289)
T 3og7_A          155 EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI  234 (289)
T ss_dssp             TTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH
T ss_pred             CCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH
Confidence            46889999999872                                  45799999999999999999999875544 44


Q ss_pred             HHHHHhCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         47 RAHISVADYSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        47 ~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ...+.......+ ......+++++++||.+||..+|.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            555554443322 2233468999999999999999999999998875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=8.4e-16  Score=118.69  Aligned_cols=89  Identities=21%  Similarity=0.392  Sum_probs=74.2

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      .++.+||+|||++                                ++.++||||+||++|+|++ |..||.+.+..+...
T Consensus       182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~  261 (333)
T 1mqb_A          182 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK  261 (333)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            3678999999987                                2667999999999999998 999999888888888


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+..+... +  ....++++++++|.+||+.+|.+||++.+++++
T Consensus       262 ~~~~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          262 AINDGFRL-P--TPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHTTCCC-C--CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHCCCcC-C--CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            87765322 1  123689999999999999999999999998875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.62  E-value=4.2e-16  Score=119.01  Aligned_cols=90  Identities=23%  Similarity=0.426  Sum_probs=70.9

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||++                               ++.++||||+||++|+|++ |..||.+.........
T Consensus       180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  259 (313)
T 1t46_A          180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK  259 (313)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred             CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHH
Confidence            4688999999987                               2778999999999999999 9999987665444443


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +........  ....++++++++|.+||..+|.+||++.+++++
T Consensus       260 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          260 MIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            333222221  123689999999999999999999999998875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.62  E-value=5.8e-16  Score=129.10  Aligned_cols=88  Identities=20%  Similarity=0.290  Sum_probs=75.7

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||++                                ++.++|||||||++|||++ |+.||.+.+..+...
T Consensus       504 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~  583 (635)
T 4fl3_A          504 TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA  583 (635)
T ss_dssp             ETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             CCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            3578999999987                                3778999999999999998 999999999988888


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+..+.....   +..+++++.+||.+||..+|++||++.++++
T Consensus       584 ~i~~~~~~~~---p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          584 MLEKGERMGC---PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHcCCCCCC---CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            8887653222   2368999999999999999999999998865

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.62  E-value=1.7e-16  Score=120.26  Aligned_cols=92  Identities=22%  Similarity=0.296  Sum_probs=69.2

Q ss_pred             CCCeEEEEecCCC------------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC---
Q psy14043          2 NGAVLKLIDLGSS------------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES---   42 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~---   42 (205)
                      +++.+||+|||++                                    ++.++||||+||++|+|++|+.||.+..   
T Consensus       143 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  222 (296)
T 3uzp_A          143 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT  222 (296)
T ss_dssp             GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred             CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh
Confidence            4678999999987                                    2568999999999999999999998632   


Q ss_pred             HHHHHHHHHhCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         43 EEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        43 ~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+.+..+.......+ ......+++++.++|.+||+.+|++||++.++++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  274 (296)
T 3uzp_A          223 KRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL  274 (296)
T ss_dssp             SSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred             hhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence            2233344333222222 11223689999999999999999999999888763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=7.6e-16  Score=116.77  Aligned_cols=89  Identities=21%  Similarity=0.315  Sum_probs=72.2

Q ss_pred             CCCeEEEEecCCCC---------------------------------CcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------GPSTDMWSLGVLLYILLS-GVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++.                                 +.++||||+||++|+|++ |.+||...+..+..
T Consensus       159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~  238 (298)
T 3pls_A          159 ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT  238 (298)
T ss_dssp             TTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH
T ss_pred             CCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH
Confidence            45789999999882                                 778999999999999999 66667777777777


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+........   ...+++++.+++.+||..+|.+||++.++++.
T Consensus       239 ~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          239 HFLAQGRRLPQ---PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhhcCCCCCC---CccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            77666543222   23689999999999999999999999988764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.62  E-value=6.4e-16  Score=118.35  Aligned_cols=76  Identities=16%  Similarity=0.211  Sum_probs=63.7

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.++||||+||++|+|++|..||.+....+....+.........  ...+++++++++.+||..+|.+||++.++++.
T Consensus       221 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          221 SKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            55799999999999999999999998888888777765433222  23588999999999999999999999998763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.62  E-value=6.7e-16  Score=121.09  Aligned_cols=89  Identities=20%  Similarity=0.375  Sum_probs=71.0

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      .++.+||+|||++                                ++.++|||||||++|||++ |+.||.+.+..+...
T Consensus       182 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~  261 (373)
T 2qol_A          182 SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK  261 (373)
T ss_dssp             TTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHH
T ss_pred             CCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            4678999999987                                2678999999999999998 999999988888887


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+........   ...++.++.+++.+||+.+|.+||++.++++.
T Consensus       262 ~i~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~  303 (373)
T 2qol_A          262 AVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI  303 (373)
T ss_dssp             HHHTTEECCC---CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCC---CccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence            7766532222   23689999999999999999999999998763

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.62  E-value=2.4e-16  Score=119.54  Aligned_cols=78  Identities=19%  Similarity=0.251  Sum_probs=60.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHhCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDE---SEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      +.++|||||||++|+|++|+.||.+.   ...+.+..+.......+ ......+++++++++.+||..+|++||++.+++
T Consensus       196 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~  275 (298)
T 1csn_A          196 SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  275 (298)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHH
Confidence            77899999999999999999999873   44455555544322222 122336899999999999999999999999887


Q ss_pred             cc
Q psy14043         92 QV   93 (205)
Q Consensus        92 ~~   93 (205)
                      +.
T Consensus       276 ~~  277 (298)
T 1csn_A          276 GL  277 (298)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.62  E-value=4.4e-16  Score=126.37  Aligned_cols=87  Identities=22%  Similarity=0.353  Sum_probs=73.3

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++|||||||++|||++ |..||.+.+..+....+.
T Consensus       354 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~  433 (495)
T 1opk_A          354 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE  433 (495)
T ss_dssp             GGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred             CCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            578999999988                              2678999999999999999 999999888877777766


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .....   ..+..+++++++||.+||+.+|.+||++.++++
T Consensus       434 ~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          434 KDYRM---ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             TTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCC---CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            54321   122368999999999999999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.62  E-value=6.2e-16  Score=117.37  Aligned_cols=89  Identities=24%  Similarity=0.422  Sum_probs=73.8

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~   47 (205)
                      +++.+||+|||++                                 ++.++||||+||++|+|++ |.+||.+.+..+..
T Consensus       163 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~  242 (298)
T 3f66_A          163 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT  242 (298)
T ss_dssp             TTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH
T ss_pred             CCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH
Confidence            4678999999988                                 2778999999999999999 77888877777777


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+........+   ..+++++.+++.+||..+|.+||++.++++.
T Consensus       243 ~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  285 (298)
T 3f66_A          243 VYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  285 (298)
T ss_dssp             HHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            777665544333   3589999999999999999999999998763

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.61  E-value=7.4e-16  Score=126.17  Aligned_cols=87  Identities=24%  Similarity=0.341  Sum_probs=74.7

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++|||||||++|||++ |..||.+....+....+.
T Consensus       399 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~  478 (535)
T 2h8h_A          399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  478 (535)
T ss_dssp             GGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH
T ss_pred             CCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            578999999998                              2778999999999999999 999999999888888887


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+... +  ....+++++++||.+||..+|++||++.++++
T Consensus       479 ~~~~~-~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          479 RGYRM-P--CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             TTCCC-C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCC-C--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            65322 1  12368999999999999999999999998876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.61  E-value=6.4e-16  Score=116.68  Aligned_cols=88  Identities=20%  Similarity=0.321  Sum_probs=73.4

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++||||+||++|+|++ |.+||.+.+..+....+.
T Consensus       147 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~  226 (288)
T 3kfa_A          147 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE  226 (288)
T ss_dssp             GGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred             CCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            578999999987                              2678999999999999999 999999888777777766


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......   ....+++++.+|+.+||..+|.+||++.++++.
T Consensus       227 ~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          227 KDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA  265 (288)
T ss_dssp             TTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCCC---CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence            543221   223689999999999999999999999998763

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.61  E-value=7.2e-16  Score=117.82  Aligned_cols=90  Identities=24%  Similarity=0.364  Sum_probs=69.2

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||++                              ++.++|||||||++|+|++|+.||.+.........+.
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  248 (309)
T 2h34_A          169 ADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHIN  248 (309)
T ss_dssp             TTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHH
T ss_pred             CCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhc
Confidence            3678999999987                              2678999999999999999999998876654444444


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCC-Ccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRP-TAGQLLQ   92 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-~~~~~l~   92 (205)
                      . ....+......++++++++|.+||..+|++|| ++.++++
T Consensus       249 ~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          249 Q-AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             S-CCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             c-CCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            3 33333334457899999999999999999999 6666654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.61  E-value=1.8e-15  Score=113.08  Aligned_cols=88  Identities=24%  Similarity=0.313  Sum_probs=72.3

Q ss_pred             CCeEEEEecCCCC---------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSSA---------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~~---------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||++.                           +.++||||+||++|+|++|+.||.+.+..+....+.....
T Consensus       149 ~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~  228 (271)
T 3kmu_A          149 DMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL  228 (271)
T ss_dssp             TSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCC
T ss_pred             CcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCC
Confidence            5788999888762                           2269999999999999999999999888887777665443


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ...  .+..+++++++++.+||+.+|++||++.++++
T Consensus       229 ~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          229 RPT--IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             CCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            322  23468999999999999999999999998875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.60  E-value=5.7e-16  Score=118.42  Aligned_cols=89  Identities=22%  Similarity=0.336  Sum_probs=70.7

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEE-ETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~-~~~~~   49 (205)
                      ++.+||+|||++                               ++.++||||+||++|+|++ |..||.+.... .....
T Consensus       184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  263 (316)
T 2xir_A          184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  263 (316)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH
Confidence            578999999987                               2678999999999999998 99999876543 34444


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      +.......   ....++++++++|.+||..+|.+||++.+++++-
T Consensus       264 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L  305 (316)
T 2xir_A          264 LKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL  305 (316)
T ss_dssp             HHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hccCccCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            44433211   1235899999999999999999999999998763

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.60  E-value=4.5e-16  Score=119.98  Aligned_cols=89  Identities=22%  Similarity=0.370  Sum_probs=70.7

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++.+||+|||++                               ++.++|||||||++|+|++ |.+||.+.........+
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  279 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL  279 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence            578999999987                               2778999999999999998 99999876655444444


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .......+  .....++++.++|.+||+.+|.+||++.+++++
T Consensus       280 ~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          280 VKDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            43333222  223579999999999999999999999998764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.60  E-value=3.4e-16  Score=118.57  Aligned_cols=91  Identities=22%  Similarity=0.280  Sum_probs=68.3

Q ss_pred             CCCeEEEEecCCCC------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCH--
Q psy14043          2 NGAVLKLIDLGSSA------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESE--   43 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~--   43 (205)
                      +++.+||+|||++.                                    +.++||||+||++|+|++|+.||.+.+.  
T Consensus       143 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  222 (296)
T 4hgt_A          143 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT  222 (296)
T ss_dssp             GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred             CCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh
Confidence            36789999999872                                    5689999999999999999999976432  


Q ss_pred             -HHHHHHHHhCCCCCCC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         44 -EETRAHISVADYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        44 -~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                       .+....+.......+. .....++++++++|.+||+.+|++||++.++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          223 KRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             SSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence             2233333332222221 122368999999999999999999999998876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.60  E-value=9.2e-16  Score=117.11  Aligned_cols=90  Identities=33%  Similarity=0.511  Sum_probs=68.4

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE--SEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~--~~~~~~~~i   50 (205)
                      .++.+||+|||++                             ++.++|||||||++|+|++|..||.+.  ...+....+
T Consensus       171 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  250 (310)
T 2wqm_A          171 ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI  250 (310)
T ss_dssp             TTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH
T ss_pred             CCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh
Confidence            3678999999987                             267899999999999999999999754  344555565


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ......  ......++++++++|.+||..+|.+||++.++++.
T Consensus       251 ~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          251 EQCDYP--PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HTTCSC--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcccCC--CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            554432  22234689999999999999999999999998864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.59  E-value=1.4e-15  Score=114.91  Aligned_cols=85  Identities=24%  Similarity=0.376  Sum_probs=66.5

Q ss_pred             CeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCCC
Q psy14043          4 AVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYS   56 (205)
Q Consensus         4 ~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~~~   56 (205)
                      +.+||+|||++                          ++.++||||+||++|+|++ |.+||............ .....
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~-~~~~~  236 (289)
T 4fvq_A          158 PFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY-EDRHQ  236 (289)
T ss_dssp             CEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTTCC
T ss_pred             ceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh-hccCC
Confidence            34999999988                          3778999999999999999 55666555555444433 33344


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+.    ..++++++||.+||+.+|.+||++.+++++
T Consensus       237 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          237 LPA----PKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            343    468899999999999999999999999876

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.59  E-value=2.7e-15  Score=125.47  Aligned_cols=88  Identities=22%  Similarity=0.328  Sum_probs=75.3

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||++                              ++.++||||+||++|||++ |.+||.+....+....+.
T Consensus       527 ~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~  606 (656)
T 2j0j_A          527 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  606 (656)
T ss_dssp             TTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             CCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            688999999988                              2678999999999999997 999999998888888887


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+....   .+..+++++.++|.+||..+|.+||++.++++.
T Consensus       607 ~~~~~~---~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          607 NGERLP---MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             HTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCC---CCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            754322   123689999999999999999999999988753

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.59  E-value=5.2e-16  Score=120.39  Aligned_cols=78  Identities=14%  Similarity=0.178  Sum_probs=56.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCCCCCC-----cCCCCCHHHHHHHHHhcccCcCCCCCcc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLD--ESEEETRAHISVADYSFPPE-----QCGHISVPARELIGQLLNTHADKRPTAG   88 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~   88 (205)
                      +.++|||||||++|||++|+.||.+  .................+..     ....++++++++|.+||..+|++||++.
T Consensus       238 ~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  317 (345)
T 2v62_A          238 SRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQ  317 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHH
Confidence            7899999999999999999999965  23332222222211122211     0115899999999999999999999999


Q ss_pred             ccccc
Q psy14043         89 QLLQV   93 (205)
Q Consensus        89 ~~l~~   93 (205)
                      ++++.
T Consensus       318 ~l~~~  322 (345)
T 2v62_A          318 ALKKI  322 (345)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.58  E-value=3.3e-16  Score=122.33  Aligned_cols=91  Identities=14%  Similarity=0.157  Sum_probs=65.8

Q ss_pred             CCCeEEEEecCCC------------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHH-
Q psy14043          2 NGAVLKLIDLGSS------------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEE-   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~-   44 (205)
                      +++.+||+|||++                                    ++.++|||||||++|||++|+.||.+.... 
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~  268 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP  268 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence            4688999999988                                    277899999999999999999999853222 


Q ss_pred             HHHHHHHhC-CCCCC-----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         45 ETRAHISVA-DYSFP-----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        45 ~~~~~i~~~-~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ......... ....+     ......+++++.+++.+||..+|.+||++.++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            111111110 00000     0001357999999999999999999999988876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.58  E-value=7.3e-16  Score=118.80  Aligned_cols=77  Identities=16%  Similarity=0.140  Sum_probs=58.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDE---SEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.++|||||||++|||++|..||.+.   ...+.+..+.......+........+++++++.+||..+|.+||++.++.+
T Consensus       195 ~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          195 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             CchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            66899999999999999999999873   444555665544433332221122349999999999999999999988776

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.58  E-value=2.6e-15  Score=113.87  Aligned_cols=88  Identities=18%  Similarity=0.279  Sum_probs=66.5

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH------
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE------   44 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~------   44 (205)
                      ++.+||+|||++.                                +.++||||+||++|+|++|..||......      
T Consensus       150 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~  229 (295)
T 3ugc_A          150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG  229 (295)
T ss_dssp             TTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHC
T ss_pred             CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhc
Confidence            5789999999882                                77899999999999999999998643211      


Q ss_pred             ----------HHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         45 ----------ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        45 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                                .....+.... ..  ..+..+++++.++|.+||..+|++||++.++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~  285 (295)
T 3ugc_A          230 NDKQGQMIVFHLIELLKNNG-RL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR  285 (295)
T ss_dssp             TTCCTHHHHHHHHHHHHTTC-CC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CccccchhHHHHHHHHhccC-cC--CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                      1222222221 11  1234689999999999999999999999998753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.57  E-value=1.3e-15  Score=116.99  Aligned_cols=92  Identities=17%  Similarity=0.121  Sum_probs=64.1

Q ss_pred             CCCeEEEEecCCCC------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCC---
Q psy14043          2 NGAVLKLIDLGSSA------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDES---   42 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~---   42 (205)
                      +++.+||+|||++.                                    +.++||||+||++|||++|+.||.+..   
T Consensus       166 ~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  245 (322)
T 3soc_A          166 NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY  245 (322)
T ss_dssp             TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred             CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence            35789999999982                                    235699999999999999999997532   


Q ss_pred             -------------HHHHHHHHHhCCCCCCC-CcC--CCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         43 -------------EEETRAHISVADYSFPP-EQC--GHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        43 -------------~~~~~~~i~~~~~~~~~-~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                                   ..+....+......... ..+  ...++++.+||.+||+.+|++||++.++++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~  312 (322)
T 3soc_A          246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER  312 (322)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                         22233333322221111 100  1124569999999999999999999998764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.56  E-value=1.4e-15  Score=117.17  Aligned_cols=75  Identities=25%  Similarity=0.461  Sum_probs=53.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      +.++|||||||++|+|++|+.||...........    ....+.  ....++.+++||.+||+.+|.+||++.+++++..
T Consensus       231 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG----KYSIPP--HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCCC----------------CCCCT--TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC----cccCCc--ccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            4589999999999999999999976544433222    222222  2357889999999999999999999999998754


Q ss_pred             h
Q psy14043         96 F   96 (205)
Q Consensus        96 ~   96 (205)
                      .
T Consensus       305 ~  305 (337)
T 3ll6_A          305 E  305 (337)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.56  E-value=1.5e-15  Score=122.70  Aligned_cols=91  Identities=19%  Similarity=0.257  Sum_probs=68.7

Q ss_pred             CCCeEEEEecCCC------------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC---
Q psy14043          2 NGAVLKLIDLGSS------------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES---   42 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~---   42 (205)
                      .++.+||+|||++                                    ++.++|||||||++|||++|+.||.+..   
T Consensus       141 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~  220 (483)
T 3sv0_A          141 RANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT  220 (483)
T ss_dssp             GTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred             CCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh
Confidence            4678999999988                                    2668899999999999999999998643   


Q ss_pred             HHHHHHHHHhCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         43 EEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        43 ~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+.+..+........ ......+++++.+||.+||..+|++||++.++++
T Consensus       221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          221 KKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            3344444433222111 1122368999999999999999999999987664

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.56  E-value=1.8e-15  Score=117.64  Aligned_cols=78  Identities=15%  Similarity=0.167  Sum_probs=57.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHH---hCCCCCCC--CcCCCCCHHHHHHHHHhcccCcCCCCCcc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDE--SEEETRAHIS---VADYSFPP--EQCGHISVPARELIGQLLNTHADKRPTAG   88 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~--~~~~~~~~i~---~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~   88 (205)
                      +.++|||||||++|+|++|+.||.+.  ..........   .....+..  ..+..+++++++||.+||..+|.+||++.
T Consensus       246 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  325 (352)
T 2jii_A          246 SRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYA  325 (352)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHH
Confidence            67899999999999999999999865  3333333322   22221111  11235799999999999999999999999


Q ss_pred             ccccc
Q psy14043         89 QLLQV   93 (205)
Q Consensus        89 ~~l~~   93 (205)
                      ++++.
T Consensus       326 ~l~~~  330 (352)
T 2jii_A          326 MLRNN  330 (352)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.55  E-value=8.2e-16  Score=118.04  Aligned_cols=94  Identities=19%  Similarity=0.239  Sum_probs=66.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH---
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR---   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~---   47 (205)
                      .++.+||+|||++                               ++.++||||+||++|+|++|+.||.+....+..   
T Consensus       174 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~  253 (321)
T 2qkw_B          174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA  253 (321)
T ss_dssp             TTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHH
T ss_pred             CCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHH
Confidence            3678999999987                               277899999999999999999999764322111   


Q ss_pred             ----HHHHhCCC------CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         48 ----AHISVADY------SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        48 ----~~i~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                          ........      ..........+.++.+++.+||+.+|++||++.+++++..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             HHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence                11111111      1111111234577899999999999999999999987643

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.55  E-value=2.7e-15  Score=115.41  Aligned_cols=89  Identities=21%  Similarity=0.279  Sum_probs=68.1

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH-----
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE-----   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~-----   44 (205)
                      +++.+||+|||++.                                +.++|||||||++|+|++|..||......     
T Consensus       162 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~  241 (327)
T 3lxl_A          162 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM  241 (327)
T ss_dssp             ETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHC
T ss_pred             CCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhc
Confidence            36789999999882                                66899999999999999999998653321     


Q ss_pred             ----------HHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         45 ----------ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        45 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                                .....+.....   ......+++++++||.+||..+|.+||++.+++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          242 GCERDVPALSRLLELLEEGQR---LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             C----CCHHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccccccHHHHHHHhhcccC---CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                      22223332221   12234689999999999999999999999999765

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.54  E-value=4.1e-15  Score=123.65  Aligned_cols=95  Identities=26%  Similarity=0.408  Sum_probs=67.2

Q ss_pred             eEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-------
Q psy14043          5 VLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH-------   49 (205)
Q Consensus         5 ~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~-------   49 (205)
                      .+||+|||.+                            ++.++||||+||++|+|++|..||.+.........       
T Consensus       162 ~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~  241 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN  241 (676)
T ss_dssp             EEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC----
T ss_pred             eEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccc
Confidence            5899999988                            27789999999999999999999976533221100       


Q ss_pred             --H-----HhCCCCC------CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         50 --I-----SVADYSF------PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        50 --i-----~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                        +     ..+...+      +......+++.+.+||.+||..||.+||++.++++|+||..+
T Consensus       242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred             hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence              0     0111111      111222367899999999999999999999999999999654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.54  E-value=4.7e-15  Score=113.73  Aligned_cols=88  Identities=23%  Similarity=0.320  Sum_probs=66.6

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH-----
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE-----   44 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~-----   44 (205)
                      +++.+||+|||++.                                +.++||||+||++|+|++|..||......     
T Consensus       169 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~  248 (318)
T 3lxp_A          169 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI  248 (318)
T ss_dssp             TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred             CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhh
Confidence            46789999999882                                56789999999999999999999653221     


Q ss_pred             ----------HHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         45 ----------ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        45 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                .....+.....   ......+++++.+||.+||+.+|.+||++.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          249 GIAQGQMTVLRLTELLERGER---LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CSCCHHHHHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccccchhHHHHHHHHhcccC---CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                      12222222221   1223468999999999999999999999999875

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.54  E-value=2.6e-14  Score=108.35  Aligned_cols=82  Identities=18%  Similarity=0.321  Sum_probs=71.0

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC--CCEEEe
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLTS  177 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~--~~~las  177 (205)
                      ...|...+.+++|+++++++++|+.|+.+++|++.....            ....++.+|.+.|.+++|+++  +++|+|
T Consensus         5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~------------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s   72 (297)
T 2pm7_B            5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH------------KLIDTLTGHEGPVWRVDWAHPKFGTILAS   72 (297)
T ss_dssp             CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB------------CCCEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred             ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc------------EEEEEEccccCCeEEEEecCCCcCCEEEE
Confidence            346777899999999999999999999999999975321            145788999999999999864  899999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.|++|++||+.++.
T Consensus        73 ~s~D~~v~iWd~~~~~   88 (297)
T 2pm7_B           73 CSYDGKVMIWKEENGR   88 (297)
T ss_dssp             EETTTEEEEEEBSSSC
T ss_pred             EcCCCEEEEEEcCCCc
Confidence            9999999999998764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.53  E-value=6.7e-15  Score=110.73  Aligned_cols=88  Identities=18%  Similarity=0.307  Sum_probs=70.1

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||++                            ++.++||||+||++|+|++|..||..  .......+....
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--~~~~~~~~~~~~  235 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--TSKFFTDLRDGI  235 (284)
T ss_dssp             TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH--HHHHHHHHHTTC
T ss_pred             CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh--HHHHHHHhhccc
Confidence            578999999987                            27789999999999999999999843  223334444322


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                        .+    ..++++++++|.+||..+|.+||++.+++++.+...
T Consensus       236 --~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          236 --IS----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             --CC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             --cc----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence              22    258999999999999999999999999999877643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.53  E-value=8.9e-15  Score=112.39  Aligned_cols=94  Identities=13%  Similarity=0.095  Sum_probs=64.9

Q ss_pred             CCCeEEEEecCCCC------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC-----CHHHH
Q psy14043          2 NGAVLKLIDLGSSA------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE-----SEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~-----~~~~~   46 (205)
                      +++.+||+|||++.                              +.++||||+||++|+|++|..||...     .....
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  248 (326)
T 3uim_A          169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML  248 (326)
T ss_dssp             TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred             CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence            35789999999982                              77899999999999999999999521     11111


Q ss_pred             HHHHHhCCCC----------CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         47 RAHISVADYS----------FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        47 ~~~i~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      ...+......          .........++++.+++.+||+.+|.+||++.+++++-.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            1111110000          000111123478999999999999999999999998755

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.52  E-value=7.3e-15  Score=111.62  Aligned_cols=88  Identities=16%  Similarity=0.183  Sum_probs=65.4

Q ss_pred             CCCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC--------
Q psy14043          2 NGAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE--------   41 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~--------   41 (205)
                      .++.+||+|||++.                                +.++||||+||++|+|++|..|+...        
T Consensus       161 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  240 (302)
T 4e5w_A          161 SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI  240 (302)
T ss_dssp             ETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred             CCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhcc
Confidence            35789999999882                                56799999999999999999886422        


Q ss_pred             -------CHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         42 -------SEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        42 -------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                             ........+..... .  .....+++++.+||.+||..+|.+||++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          241 GPTHGQMTVTRLVNTLKEGKR-L--PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CSCCGGGHHHHHHHHHHTTCC-C--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCcccccCHHHHHHHHhccCC-C--CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence                   11122233332221 1  122368999999999999999999999998875

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.52  E-value=2.8e-14  Score=110.65  Aligned_cols=79  Identities=18%  Similarity=0.213  Sum_probs=71.8

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeecC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~~  180 (205)
                      .|...+.+++|+|+++++++|+.|+.|++||+.++.              ...++.+|...|.+++|++++. .|+||+.
T Consensus       125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--------------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~  190 (344)
T 4gqb_B          125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--------------VLSSYRAHAAQVTCVAASPHKDSVFLSCSE  190 (344)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred             CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEcCcCCceEEEEecCCCCCceeeecc
Confidence            466788999999999999999999999999999876              6688999999999999999884 7899999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |++|++||+.+++.
T Consensus       191 D~~v~iwd~~~~~~  204 (344)
T 4gqb_B          191 DNRILLWDTRCPKP  204 (344)
T ss_dssp             TSCEEEEETTSSSC
T ss_pred             ccccccccccccce
Confidence            99999999988764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.52  E-value=8.8e-15  Score=111.04  Aligned_cols=76  Identities=18%  Similarity=0.286  Sum_probs=52.5

Q ss_pred             cchhHHHHHHHHHHHHcC----------CCCCCCC----CHHHHHHHHHhCCCCCCCC----cCCCCCHHHHHHHHHhcc
Q psy14043         17 PSTDMWSLGVLLYILLSG----------VSPFLDE----SEEETRAHISVADYSFPPE----QCGHISVPARELIGQLLN   78 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g----------~~pf~~~----~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~li~~~l~   78 (205)
                      .++||||+||++|||++|          ..||...    ........+.......+..    .....++++.+|+.+||+
T Consensus       202 ~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  281 (301)
T 3q4u_A          202 KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWY  281 (301)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCC
T ss_pred             chhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhh
Confidence            489999999999999999          8998643    2222333322221111111    011245789999999999


Q ss_pred             cCcCCCCCcccccc
Q psy14043         79 THADKRPTAGQLLQ   92 (205)
Q Consensus        79 ~~p~~R~~~~~~l~   92 (205)
                      .+|.+||++.++++
T Consensus       282 ~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          282 QNPSARLTALRIKK  295 (301)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             cChhhCCCHHHHHH
Confidence            99999999998875

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.52  E-value=3.1e-14  Score=110.66  Aligned_cols=79  Identities=15%  Similarity=0.384  Sum_probs=71.6

Q ss_pred             cCCCccccccccccCCCeeeecccccc-eEEEEecCCCCcchhhhhhcccceeceecc-c-ceeeEEEEEEcCCCCEEEe
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGL-LKVLKLDTGKESTGQVAAANVNLAMNQSLQ-G-HSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-g-h~~~v~~~~~s~~~~~las  177 (205)
                      ..|...+.+++|+|+++++++|+.|++ +++||+.++.              ...++. | |...|.+++|+|+|++|++
T Consensus       192 ~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--------------~~~~~~~g~h~~~v~~~~~s~~~~~l~s  257 (355)
T 3vu4_A          192 KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--------------LVREFRRGLDRADVVDMKWSTDGSKLAV  257 (355)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC--------------EEEEEECTTCCSCEEEEEECTTSCEEEE
T ss_pred             EccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--------------EEEEEEcCCCCCcEEEEEECCCCCEEEE
Confidence            457778999999999999999999998 9999999876              556776 6 9999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      ++.|++|++||+..+.
T Consensus       258 ~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          258 VSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             EETTCEEEEEESSCCS
T ss_pred             EECCCEEEEEEccCCC
Confidence            9999999999997653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.51  E-value=3.6e-14  Score=108.87  Aligned_cols=78  Identities=17%  Similarity=0.352  Sum_probs=71.7

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++++++|+.|+.+++||+.+..              ...++.+|...|.+++|+|++++|+|++.|
T Consensus       204 ~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D  269 (321)
T 3ow8_A          204 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN--------------LAGTLSGHASWVLNVAFCPDDTHFVSSSSD  269 (321)
T ss_dssp             CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc--------------eeEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence            466678999999999999999999999999998776              567889999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+.++.
T Consensus       270 ~~v~iwd~~~~~  281 (321)
T 3ow8_A          270 KSVKVWDVGTRT  281 (321)
T ss_dssp             SCEEEEETTTTE
T ss_pred             CcEEEEeCCCCE
Confidence            999999998764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.51  E-value=3.1e-15  Score=114.45  Aligned_cols=76  Identities=24%  Similarity=0.422  Sum_probs=55.8

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDES--EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +.++|||||||++|+|++|..||....  .......+.. ....+.  ...+++++.++|.+||+.+|.+||++.+++++
T Consensus       224 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIPQ--SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCCc--cccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            668999999999999999999995311  1112222222 222222  23689999999999999999999999999886


Q ss_pred             c
Q psy14043         94 A   94 (205)
Q Consensus        94 ~   94 (205)
                      -
T Consensus       301 L  301 (317)
T 2buj_A          301 L  301 (317)
T ss_dssp             H
T ss_pred             h
Confidence            4

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.51  E-value=4.1e-15  Score=117.44  Aligned_cols=77  Identities=21%  Similarity=0.299  Sum_probs=56.6

Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCC----CCHHHHHHHHHhCCCCCC---------------------CCcCCCCCHHHHH
Q psy14043         17 PSTDMWSLGVLLYILLSGVSPFLD----ESEEETRAHISVADYSFP---------------------PEQCGHISVPARE   71 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g~~pf~~----~~~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~~~~   71 (205)
                      .++||||+||++|||++|+.||..    ....+.+..+..+.+...                     ......+++.+.+
T Consensus       202 ~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~  281 (396)
T 4eut_A          202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP  281 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchH
Confidence            478999999999999999999964    234456666665443210                     0111234568889


Q ss_pred             HHHHhcccCcCCCCCccccccc
Q psy14043         72 LIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        72 li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ++.+||+.||++|+++.++++.
T Consensus       282 ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          282 VLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHHHSCCCTTTSCCHHHHHHH
T ss_pred             HHHHhhccChhhhccHHHHHHH
Confidence            9999999999999999988654

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.51  E-value=2.6e-14  Score=113.24  Aligned_cols=79  Identities=20%  Similarity=0.349  Sum_probs=73.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.++.|+|++.++++|+.|+.+++||+.++.              ...++.+|.+.|.+++|+|++++|+||+.
T Consensus       105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~  170 (410)
T 1vyh_C          105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------------FERTLKGHTDSVQDISFDHSGKLLASCSA  170 (410)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------------CCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEeccCCcEEEEEEcCCCCEEEEEeC
Confidence            4677889999999999999999999999999999886              56789999999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.++.
T Consensus       171 D~~i~iwd~~~~~  183 (410)
T 1vyh_C          171 DMTIKLWDFQGFE  183 (410)
T ss_dssp             TSCCCEEETTSSC
T ss_pred             CCeEEEEeCCCCc
Confidence            9999999997654

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.50  E-value=3.1e-14  Score=116.75  Aligned_cols=76  Identities=21%  Similarity=0.360  Sum_probs=68.9

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+++++|+|+++++|+|+.|+.+++||. ++.              ..+++.||.+.|++++||||+++|||++
T Consensus        12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~--------------~~~~l~gh~~~V~~l~fspdg~~las~~   76 (577)
T 2ymu_A           12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ--------------LLQTLTGHSSSVWGVAFSPDGQTIASAS   76 (577)
T ss_dssp             ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC--------------EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCC--------------EEEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence            3468889999999999999999999999999995 333              5578999999999999999999999999


Q ss_pred             CCCcEEEEeec
Q psy14043        180 ETGLIIVWMLY  190 (205)
Q Consensus       180 ~d~~i~~wd~~  190 (205)
                      .|++|+|||..
T Consensus        77 ~d~~i~vWd~~   87 (577)
T 2ymu_A           77 DDKTVKLWNRN   87 (577)
T ss_dssp             TTSCEEEEETT
T ss_pred             CCCEEEEEECC
Confidence            99999999964

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.50  E-value=2.8e-14  Score=109.14  Aligned_cols=84  Identities=17%  Similarity=0.299  Sum_probs=68.3

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC--CCCEE
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QYEKL  175 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~--~~~~l  175 (205)
                      .....|...+.+++|+++++++++|+.|+.+++||+.++..            ....++.+|.+.|++++|++  ++++|
T Consensus         7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~------------~~~~~l~gH~~~V~~v~~~~~~~~~~l   74 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ------------ILIADLRGHEGPVWQVAWAHPMYGNIL   74 (316)
T ss_dssp             -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE------------EEEEEEECCSSCEEEEEECCGGGSSCE
T ss_pred             eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc------------EEEEEEcCCCccEEEEEeCCCCCCCEE
Confidence            34456788999999999999999999999999999987531            13467899999999999986  48999


Q ss_pred             EeecCCCcEEEEeecCCC
Q psy14043        176 TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       176 as~~~d~~i~~wd~~~~~  193 (205)
                      +||+.|++|++||+.++.
T Consensus        75 ~s~s~D~~v~iWd~~~~~   92 (316)
T 3bg1_A           75 ASCSYDRKVIIWREENGT   92 (316)
T ss_dssp             EEEETTSCEEEECCSSSC
T ss_pred             EEEECCCEEEEEECCCCc
Confidence            999999999999998764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.50  E-value=3.6e-15  Score=113.59  Aligned_cols=92  Identities=20%  Similarity=0.351  Sum_probs=65.7

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHH----HH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEE----TR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~----~~   47 (205)
                      +++.+||+|||++                              ++.++|||||||++|+|++|.+||.+....+    ..
T Consensus       168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  247 (307)
T 2nru_A          168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK  247 (307)
T ss_dssp             TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred             CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence            3578999999986                              2668999999999999999999997653322    22


Q ss_pred             HHHHhCCCCC-------CCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 AHISVADYSF-------PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~~i~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+......+       ........+..+.+++.+||..+|.+||++.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            2222211110       011111345778999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.49  E-value=3.1e-14  Score=109.68  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=52.1

Q ss_pred             chhHHHHHHHHHHHHcC----------CCCCCCC-----CHHHHHHHHHhCCCC--CCCC-cCCCCCHHHHHHHHHhccc
Q psy14043         18 STDMWSLGVLLYILLSG----------VSPFLDE-----SEEETRAHISVADYS--FPPE-QCGHISVPARELIGQLLNT   79 (205)
Q Consensus        18 ~~DvwslG~~~~~ll~g----------~~pf~~~-----~~~~~~~~i~~~~~~--~~~~-~~~~~~~~~~~li~~~l~~   79 (205)
                      ++||||+||++|||++|          ..||...     ........+......  ++.. ....+++++.+||.+||+.
T Consensus       232 ~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  311 (337)
T 3mdy_A          232 MADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAH  311 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCS
T ss_pred             ccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhh
Confidence            38999999999999999          7777542     222222222222211  1110 0123567899999999999


Q ss_pred             CcCCCCCccccccc
Q psy14043         80 HADKRPTAGQLLQV   93 (205)
Q Consensus        80 ~p~~R~~~~~~l~~   93 (205)
                      +|.+||++.+++++
T Consensus       312 dP~~Rps~~ell~~  325 (337)
T 3mdy_A          312 NPASRLTALRVKKT  325 (337)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999999876

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.49  E-value=2.1e-14  Score=110.43  Aligned_cols=87  Identities=20%  Similarity=0.321  Sum_probs=65.3

Q ss_pred             CCeEEEEecCCCC--------------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHH------
Q psy14043          3 GAVLKLIDLGSSA--------------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEE------   44 (205)
Q Consensus         3 ~~~~kl~Dfg~~~--------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~------   44 (205)
                      ++.+||+|||++.                                +.++|||||||++|+|++|..||......      
T Consensus       181 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~  260 (326)
T 2w1i_A          181 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG  260 (326)
T ss_dssp             TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHC
T ss_pred             CCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhc
Confidence            6789999999872                                66899999999999999999998643110      


Q ss_pred             ----------HHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         45 ----------ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        45 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                .+...+.... ..+  ....+++++.++|.+||..+|++||++.++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          261 NDKQGQMIVFHLIELLKNNG-RLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             TTCCTHHHHHHHHHHHHTTC-CCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccchhhhHHHHHHHhhcCC-CCC--CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      1122222221 111  22468999999999999999999999998875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.49  E-value=6.1e-14  Score=106.64  Aligned_cols=78  Identities=21%  Similarity=0.335  Sum_probs=71.3

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.|+++++++++|+.|+.+++||+.++.              ....+.+|.+.|.+++|+|++++|+||+.|
T Consensus        53 ~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D  118 (304)
T 2ynn_A           53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDD  118 (304)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc--------------EEEEEeCCCCcEEEEEEcCCCCEEEEECCC
Confidence            455678899999999999999999999999999886              567889999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+.++.
T Consensus       119 ~~v~lWd~~~~~  130 (304)
T 2ynn_A          119 LTVKLWNWENNW  130 (304)
T ss_dssp             SCEEEEEGGGTT
T ss_pred             CeEEEEECCCCc
Confidence            999999998763

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.48  E-value=3.3e-14  Score=108.13  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=72.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++++.|+.+++||+.++.              ...++.+|...|.+++|+|++++|++|+.
T Consensus        10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~   75 (304)
T 2ynn_A           10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--------------EVRSIQVTETPVRAGKFIARKNWIIVGSD   75 (304)
T ss_dssp             EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred             cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------------eeEEeeccCCcEEEEEEeCCCCEEEEECC
Confidence            4567789999999999999999999999999998876              55788899999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.+++
T Consensus        76 d~~i~vwd~~~~~   88 (304)
T 2ynn_A           76 DFRIRVFNYNTGE   88 (304)
T ss_dssp             TSEEEEEETTTCC
T ss_pred             CCEEEEEECCCCc
Confidence            9999999998765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.48  E-value=3.4e-14  Score=109.74  Aligned_cols=77  Identities=14%  Similarity=0.204  Sum_probs=54.9

Q ss_pred             cchhHHHHHHHHHHHHcC----------CCCCCCC-----CHHHHHHHHHhCCCCCCCC-c--CCCCCHHHHHHHHHhcc
Q psy14043         17 PSTDMWSLGVLLYILLSG----------VSPFLDE-----SEEETRAHISVADYSFPPE-Q--CGHISVPARELIGQLLN   78 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g----------~~pf~~~-----~~~~~~~~i~~~~~~~~~~-~--~~~~~~~~~~li~~~l~   78 (205)
                      .++|||||||++|||++|          ..||...     ........+.......... .  ....++.+.+++.+||+
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  315 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY  315 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCC
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhc
Confidence            579999999999999999          7898654     2344444443332221111 0  11234688999999999


Q ss_pred             cCcCCCCCccccccc
Q psy14043         79 THADKRPTAGQLLQV   93 (205)
Q Consensus        79 ~~p~~R~~~~~~l~~   93 (205)
                      .+|++||++.+++++
T Consensus       316 ~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          316 ANGAARLTALRIKKT  330 (342)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             cChhhCCCHHHHHHH
Confidence            999999999999876

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.48  E-value=6.3e-14  Score=109.08  Aligned_cols=79  Identities=18%  Similarity=0.227  Sum_probs=65.3

Q ss_pred             cCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEee
Q psy14043        101 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~  178 (205)
                      ..+...+.+++|+|++ +++++|+.|+.|++||++++.              +.+ ..+|.+.|++++||| ++++|+||
T Consensus       266 ~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~--------------~~~-~~~H~~~V~~vafsP~d~~~l~s~  330 (357)
T 4g56_B          266 AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE--------------VFR-DLSHRDFVTGVAWSPLDHSKFTTV  330 (357)
T ss_dssp             CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE--------------EEE-ECCCSSCEEEEEECSSSTTEEEEE
T ss_pred             eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc--------------EeE-ECCCCCCEEEEEEeCCCCCEEEEE
Confidence            3456678999999987 679999999999999998775              333 358999999999998 89999999


Q ss_pred             cCCCcEEEEeecCCCC
Q psy14043        179 DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~  194 (205)
                      |.|++|++||+.+...
T Consensus       331 s~Dg~v~iW~~~~~~~  346 (357)
T 4g56_B          331 GWDHKVLHHHLPSEGR  346 (357)
T ss_dssp             ETTSCEEEEECC----
T ss_pred             cCCCeEEEEECCCCCc
Confidence            9999999999976543

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.48  E-value=1.4e-13  Score=106.48  Aligned_cols=81  Identities=19%  Similarity=0.341  Sum_probs=71.4

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++|+.|+.+++|+.++...            ....++.+|...|.+++|+|++++|+||+.
T Consensus        58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~  125 (345)
T 3fm0_A           58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------------ECVTTLEGHENEVKSVAWAPSGNLLATCSR  125 (345)
T ss_dssp             SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------------EEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------------EEEEEccCCCCCceEEEEeCCCCEEEEEEC
Confidence            45777899999999999999999999999999986541            145678999999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.++.
T Consensus       126 D~~v~iwd~~~~~  138 (345)
T 3fm0_A          126 DKSVWVWEVDEED  138 (345)
T ss_dssp             TSCEEEEEECTTS
T ss_pred             CCeEEEEECCCCC
Confidence            9999999997653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.47  E-value=2.6e-15  Score=113.63  Aligned_cols=91  Identities=19%  Similarity=0.218  Sum_probs=67.9

Q ss_pred             CCCeEEEEecCCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH---HHHhCCCCCCCCcCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS--AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA---HISVADYSFPPEQCGHISVPARELIGQL   76 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~li~~~   76 (205)
                      ++|.+||+++|..  ++.++|||||||++|+|++|+.||.+.+..+.+.   .+.......+......++++++++|.+|
T Consensus       164 ~~g~~kl~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  243 (286)
T 3uqc_A          164 IDGDVVLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARS  243 (286)
T ss_dssp             TTSCEEECSCCCCTTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHH
T ss_pred             CCCCEEEEeccccCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHH
Confidence            3678898877754  6899999999999999999999998765432111   1112222222223346899999999999


Q ss_pred             cccCcCCCCCccccccc
Q psy14043         77 LNTHADKRPTAGQLLQV   93 (205)
Q Consensus        77 l~~~p~~R~~~~~~l~~   93 (205)
                      |+.||.+| ++.++++.
T Consensus       244 l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          244 VQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HCTTSSCC-CHHHHHHH
T ss_pred             cccCCccC-CHHHHHHH
Confidence            99999999 99998874

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.47  E-value=1.2e-13  Score=106.66  Aligned_cols=77  Identities=21%  Similarity=0.310  Sum_probs=71.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|++.++++|+.|+.+++||+.++.              ...++.+|...|.+++|+|++++|+|++.
T Consensus        73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--------------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~  138 (343)
T 2xzm_R           73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--------------TYKRFVGHQSEVYSVAFSPDNRQILSAGA  138 (343)
T ss_dssp             CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--------------EEEEEECCCSCEEEEEECSSTTEEEEEET
T ss_pred             ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------------EEEEEcCCCCcEEEEEECCCCCEEEEEcC
Confidence            4577789999999999999999999999999999876              56788999999999999999999999999


Q ss_pred             CCcEEEEeecC
Q psy14043        181 TGLIIVWMLYK  191 (205)
Q Consensus       181 d~~i~~wd~~~  191 (205)
                      |++|++||+..
T Consensus       139 d~~i~~wd~~~  149 (343)
T 2xzm_R          139 EREIKLWNILG  149 (343)
T ss_dssp             TSCEEEEESSS
T ss_pred             CCEEEEEeccC
Confidence            99999999863

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.47  E-value=5.9e-14  Score=111.84  Aligned_cols=79  Identities=18%  Similarity=0.304  Sum_probs=67.4

Q ss_pred             CCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~  179 (205)
                      ++...+++++|+|. +..+|+|+.||.|++||+.+....            ....+.||.+.|++++|+| ++.+|+|||
T Consensus       117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~------------~~~~~~gH~~~V~~l~f~p~~~~~l~s~s  184 (435)
T 4e54_B          117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP------------TFIKGIGAGGSITGLKFNPLNTNQFYASS  184 (435)
T ss_dssp             ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC------------EEECCCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred             CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce------------eEEEccCCCCCEEEEEEeCCCCCEEEEEe
Confidence            45567899999994 578999999999999999876521            3346679999999999998 789999999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      .|++|++||+.++
T Consensus       185 ~D~~v~iwd~~~~  197 (435)
T 4e54_B          185 MEGTTRLQDFKGN  197 (435)
T ss_dssp             SSSCEEEEETTSC
T ss_pred             CCCEEEEeeccCC
Confidence            9999999998764

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.46  E-value=1.1e-13  Score=107.34  Aligned_cols=80  Identities=20%  Similarity=0.228  Sum_probs=66.4

Q ss_pred             cCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEee
Q psy14043        101 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~  178 (205)
                      ..|...+.+++|+|++ +++++|+.|+.|++||+.++.              + ..+.+|.+.|++++|||+++ .|+||
T Consensus       254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~--------------~-~~~~~H~~~V~~v~~sp~~~~llas~  318 (344)
T 4gqb_B          254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE--------------L-FRSQAHRDFVRDATWSPLNHSLLTTV  318 (344)
T ss_dssp             ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE--------------E-EEECCCSSCEEEEEECSSSTTEEEEE
T ss_pred             cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc--------------E-EEEcCCCCCEEEEEEeCCCCeEEEEE
Confidence            3566788999999998 579999999999999998764              2 35689999999999999886 57899


Q ss_pred             cCCCcEEEEeecCCCCC
Q psy14043        179 DETGLIIVWMLYKEKNP  195 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~~  195 (205)
                      |.|++|++|++.++..+
T Consensus       319 s~D~~v~~w~v~~~~~~  335 (344)
T 4gqb_B          319 GWDHQVVHHVVPTEPLP  335 (344)
T ss_dssp             ETTSCEEEEECCC----
T ss_pred             cCCCeEEEEECCCCCCC
Confidence            99999999999876654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.46  E-value=1.5e-13  Score=104.88  Aligned_cols=89  Identities=17%  Similarity=0.266  Sum_probs=76.2

Q ss_pred             hhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC--CC
Q psy14043         95 WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QY  172 (205)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~--~~  172 (205)
                      .++.+...|...+.+++|+|+++++++|+.|+.+++|++.+....          ......+.+|...|.+++|+|  ++
T Consensus         2 ~~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~d~   71 (351)
T 3f3f_A            2 HMQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----------WELSDSWRAHDSSIVAIDWASPEYG   71 (351)
T ss_dssp             CCCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----------EEEEEEEECCSSCEEEEEECCGGGC
T ss_pred             CccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----------ceecceeccCCCcEEEEEEcCCCCC
Confidence            445566678889999999999999999999999999999875421          124567789999999999999  69


Q ss_pred             CEEEeecCCCcEEEEeecCCC
Q psy14043        173 EKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~~~~~  193 (205)
                      ++|++|+.|++|++||+.++.
T Consensus        72 ~~l~s~~~dg~v~vwd~~~~~   92 (351)
T 3f3f_A           72 RIIASASYDKTVKLWEEDPDQ   92 (351)
T ss_dssp             SEEEEEETTSCEEEEEECTTS
T ss_pred             CEEEEEcCCCeEEEEecCCCc
Confidence            999999999999999998764

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.46  E-value=1.4e-13  Score=105.45  Aligned_cols=77  Identities=17%  Similarity=0.235  Sum_probs=71.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.++.|+++++++++|+.|+.+++||+.++.              ...++.+|...|.+++|+|++.+|+||+.
T Consensus        62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~  127 (319)
T 3frx_A           62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE--------------TYQRFVGHKSDVMSVDIDKKASMIISGSR  127 (319)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred             eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC--------------eeEEEccCCCcEEEEEEcCCCCEEEEEeC
Confidence            4577789999999999999999999999999999876              56788999999999999999999999999


Q ss_pred             CCcEEEEeecC
Q psy14043        181 TGLIIVWMLYK  191 (205)
Q Consensus       181 d~~i~~wd~~~  191 (205)
                      |++|++||+..
T Consensus       128 D~~i~vwd~~~  138 (319)
T 3frx_A          128 DKTIKVWTIKG  138 (319)
T ss_dssp             TSCEEEEETTS
T ss_pred             CCeEEEEECCC
Confidence            99999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.46  E-value=1.6e-14  Score=110.32  Aligned_cols=71  Identities=15%  Similarity=0.161  Sum_probs=52.9

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHH-----HHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEE-----TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL   90 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~   90 (205)
                      +.++||||+||++|+|++|..||.......     ........  ..+    ..+++++.+++.+||+.+|++||++.++
T Consensus       200 ~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~l  273 (310)
T 3s95_A          200 DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR--YCP----PNCPPSFFPITVRCCDLDPEKRPSFVKL  273 (310)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH--TCC----TTCCTTHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc--cCC----CCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            678999999999999999999986432110     01111111  112    2578899999999999999999999998


Q ss_pred             cc
Q psy14043         91 LQ   92 (205)
Q Consensus        91 l~   92 (205)
                      ++
T Consensus       274 ~~  275 (310)
T 3s95_A          274 EH  275 (310)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.46  E-value=3.1e-14  Score=109.79  Aligned_cols=76  Identities=21%  Similarity=0.294  Sum_probs=49.2

Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCC-CC-----------------HHHHHHHHHhCC--CCCCCCc--CCCCCHHHHHHHH
Q psy14043         17 PSTDMWSLGVLLYILLSGVSPFLD-ES-----------------EEETRAHISVAD--YSFPPEQ--CGHISVPARELIG   74 (205)
Q Consensus        17 ~~~DvwslG~~~~~ll~g~~pf~~-~~-----------------~~~~~~~i~~~~--~~~~~~~--~~~~~~~~~~li~   74 (205)
                      .++||||+||++|||++|..||.. ..                 ..+....+....  ..++...  ....++++++||.
T Consensus       214 ~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  293 (336)
T 3g2f_A          214 KQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE  293 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHH
Confidence            468999999999999999666532 11                 111111121111  1112110  1113458999999


Q ss_pred             HhcccCcCCCCCcccccc
Q psy14043         75 QLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        75 ~~l~~~p~~R~~~~~~l~   92 (205)
                      +||..+|++||++.++++
T Consensus       294 ~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          294 DCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             HHSCSSGGGSCCHHHHHH
T ss_pred             HHhcCChhhCcchHHHHH
Confidence            999999999999999865

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.46  E-value=1.6e-13  Score=105.91  Aligned_cols=78  Identities=15%  Similarity=0.254  Sum_probs=71.3

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++.+++|+.|+.+++||+.++.              ...++.+|...|.+++|+|++++|++|+.|
T Consensus       182 ~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d  247 (340)
T 1got_B          182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM--------------CRQTFTGHESDINAICFFPNGNAFATGSDD  247 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS--------------EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--------------eEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence            466678999999999999999999999999998876              567889999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+.++.
T Consensus       248 ~~v~iwd~~~~~  259 (340)
T 1got_B          248 ATCRLFDLRADQ  259 (340)
T ss_dssp             SCEEEEETTTTE
T ss_pred             CcEEEEECCCCc
Confidence            999999998754

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.45  E-value=1.7e-13  Score=105.19  Aligned_cols=75  Identities=16%  Similarity=0.185  Sum_probs=69.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..+...+.+++|+|++.++++++.|+.+++||+.+..              ...++.+|.+.|.+++|+|++++|+|++.
T Consensus       245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--------------~~~~~~~h~~~v~~v~~s~~g~~l~s~~~  310 (321)
T 3ow8_A          245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--------------CVHTFFDHQDQVWGVKYNGNGSKIVSVGD  310 (321)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE--------------EEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence            3466678899999999999999999999999998876              66788999999999999999999999999


Q ss_pred             CCcEEEEee
Q psy14043        181 TGLIIVWML  189 (205)
Q Consensus       181 d~~i~~wd~  189 (205)
                      |++|++||.
T Consensus       311 d~~i~vwd~  319 (321)
T 3ow8_A          311 DQEIHIYDC  319 (321)
T ss_dssp             TCCEEEEEC
T ss_pred             CCeEEEEeC
Confidence            999999995

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.45  E-value=2.4e-13  Score=103.30  Aligned_cols=80  Identities=20%  Similarity=0.449  Sum_probs=73.0

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+.+++|+|+++++++++.|+.+++|+..++.              ....+.+|...|.+++|+|++++|++|+
T Consensus        19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~   84 (312)
T 4ery_A           19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------------FEKTISGHKLGISDVAWSSDSNLLVSAS   84 (312)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------------cchhhccCCCceEEEEEcCCCCEEEEEC
Confidence            34677889999999999999999999999999998776              5577889999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|++||+.+++
T Consensus        85 ~d~~i~vwd~~~~~   98 (312)
T 4ery_A           85 DDKTLKIWDVSSGK   98 (312)
T ss_dssp             TTSEEEEEETTTCC
T ss_pred             CCCEEEEEECCCCc
Confidence            99999999998764

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.45  E-value=2.2e-13  Score=104.73  Aligned_cols=82  Identities=13%  Similarity=0.403  Sum_probs=62.9

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      |...+.+++|+|+++++++|+.|+.+++|++......       .........+.+|...|.+++|+|+|++|+||+.|+
T Consensus        57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~-------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~  129 (330)
T 2hes_X           57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR-------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDK  129 (330)
T ss_dssp             CCSCEEEEEECTTSSEEEEEETTSCEEEEEC--------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTS
T ss_pred             ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc-------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence            6778999999999999999999999999998643210       001124567899999999999999999999999999


Q ss_pred             cEEEEeecC
Q psy14043        183 LIIVWMLYK  191 (205)
Q Consensus       183 ~i~~wd~~~  191 (205)
                      +|++||+..
T Consensus       130 ~v~iwd~~~  138 (330)
T 2hes_X          130 SVWIWETDE  138 (330)
T ss_dssp             CEEEEECCT
T ss_pred             EEEEEeccC
Confidence            999999953

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.45  E-value=1.7e-13  Score=108.49  Aligned_cols=78  Identities=13%  Similarity=0.217  Sum_probs=71.7

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .|...+.+++|+++++.+++|+.|+.+++||+.+..              ...++.+|...|.+++|+|++.+|+||+.|
T Consensus       148 ~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--------------~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D  213 (410)
T 1vyh_C          148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--------------CIRTMHGHDHNVSSVSIMPNGDHIVSASRD  213 (410)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC--------------EEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred             ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--------------eeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence            466678999999999999999999999999998776              567889999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+.++.
T Consensus       214 ~~i~~wd~~~~~  225 (410)
T 1vyh_C          214 KTIKMWEVQTGY  225 (410)
T ss_dssp             SEEEEEETTTCC
T ss_pred             CeEEEEECCCCc
Confidence            999999998764

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.44  E-value=2.8e-13  Score=103.59  Aligned_cols=86  Identities=20%  Similarity=0.208  Sum_probs=73.4

Q ss_pred             cccCCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043         99 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      ....|...+++++|+|+ ++++++|+.|++|++||+.+......         ...+++.+|...|.+++|+|++++|+|
T Consensus        33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~---------~~~~~l~~h~~~V~~~~~s~dg~~l~s  103 (340)
T 4aow_A           33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG---------IPQRALRGHSHFVSDVVISSDGQFALS  103 (340)
T ss_dssp             EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE---------EEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc---------eeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence            34578889999999998 58999999999999999987652211         134678999999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      ++.|+.|++|+.....
T Consensus       104 ~~~d~~i~~~~~~~~~  119 (340)
T 4aow_A          104 GSWDGTLRLWDLTTGT  119 (340)
T ss_dssp             EETTSEEEEEETTTTE
T ss_pred             EcccccceEEeecccc
Confidence            9999999999987754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.44  E-value=1.5e-13  Score=105.17  Aligned_cols=85  Identities=20%  Similarity=0.161  Sum_probs=72.0

Q ss_pred             ccCCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        100 AIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ...|...+.+++|+|++ +.+++|+.|+.+++|++........         ....++.+|...|.+++|+|++++|+||
T Consensus        13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~---------~~~~~~~~h~~~v~~~~~s~dg~~l~s~   83 (319)
T 3frx_A           13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFG---------VPVRSFKGHSHIVQDCTLTADGAYALSA   83 (319)
T ss_dssp             ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEE---------EEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcccc---------ccceEEeCCcccEEEEEECCCCCEEEEE
Confidence            45788899999999975 8999999999999999975431110         1346789999999999999999999999


Q ss_pred             cCCCcEEEEeecCCC
Q psy14043        179 DETGLIIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~  193 (205)
                      +.|++|++||+.+++
T Consensus        84 s~D~~v~~wd~~~~~   98 (319)
T 3frx_A           84 SWDKTLRLWDVATGE   98 (319)
T ss_dssp             ETTSEEEEEETTTTE
T ss_pred             eCCCEEEEEECCCCC
Confidence            999999999998875

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.44  E-value=1.9e-13  Score=103.58  Aligned_cols=73  Identities=16%  Similarity=0.297  Sum_probs=63.6

Q ss_pred             ccccccccccCCCeeee--cccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        105 TKVNCLAWHQNQGWIAV--GGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       105 ~~~~~~~~~~~~~~las--g~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      ..+....+++.+..+++  |+.|+.+++||+.++.              ...++.||.+.|++++|||||++|+|||.|+
T Consensus       241 ~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--------------~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~  306 (318)
T 4ggc_A          241 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--------------KVAELKGHTSRVLSLTMSPDGATVASAAADE  306 (318)
T ss_dssp             SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred             eeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEecCC
Confidence            35667788888877655  4589999999999887              6688999999999999999999999999999


Q ss_pred             cEEEEeecC
Q psy14043        183 LIIVWMLYK  191 (205)
Q Consensus       183 ~i~~wd~~~  191 (205)
                      +|+|||+..
T Consensus       307 ~v~iWd~~~  315 (318)
T 4ggc_A          307 TLRLWRCFE  315 (318)
T ss_dssp             EEEEECCSC
T ss_pred             eEEEEECCC
Confidence            999999854

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.44  E-value=2.1e-13  Score=107.33  Aligned_cols=74  Identities=19%  Similarity=0.417  Sum_probs=68.3

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .+.+++|+|+++++++|+.|+.+++||+.+..              ....+.+|...|.+++|+|++++|+||+.|++|+
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~  190 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--------------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVR  190 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEE
Confidence            37889999999999999999999999998775              5577899999999999999999999999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      +||+.+++
T Consensus       191 iwd~~~~~  198 (393)
T 1erj_A          191 IWDLRTGQ  198 (393)
T ss_dssp             EEETTTTE
T ss_pred             EEECCCCe
Confidence            99998764

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.44  E-value=3.1e-13  Score=103.95  Aligned_cols=82  Identities=23%  Similarity=0.392  Sum_probs=67.1

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++|+.|+.+++||+......          ......+.+|...|.+++|+|++++|+||+.
T Consensus       104 ~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~----------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~  173 (330)
T 2hes_X          104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE----------YECISVLQEHSQDVKHVIWHPSEALLASSSY  173 (330)
T ss_dssp             C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC----------CEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred             cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC----------eEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence            356778999999999999999999999999999543210          1144678899999999999999999999999


Q ss_pred             CCcEEEEeecCC
Q psy14043        181 TGLIIVWMLYKE  192 (205)
Q Consensus       181 d~~i~~wd~~~~  192 (205)
                      |++|++||+.++
T Consensus       174 D~~i~iW~~~~~  185 (330)
T 2hes_X          174 DDTVRIWKDYDD  185 (330)
T ss_dssp             TSCEEEEEEETT
T ss_pred             CCeEEEEECCCC
Confidence            999999998764

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.43  E-value=2.6e-13  Score=112.65  Aligned_cols=79  Identities=20%  Similarity=0.334  Sum_probs=69.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec-------ccceeeEEEEEEcCCCC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL-------QGHSGKVRAIIWNEQYE  173 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-------~gh~~~v~~~~~s~~~~  173 (205)
                      ..|...+.+++|+|+++++++++.|+.+++|+..++.              ....+       .+|.+.|.+++|+|+|+
T Consensus       187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~--------------~~~~~~~~~~~~~~h~~~V~~v~~spdg~  252 (611)
T 1nr0_A          187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT--------------KTGVFEDDSLKNVAHSGSVFGLTWSPDGT  252 (611)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred             ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc--------------EeeeeccccccccccCCCEEEEEECCCCC
Confidence            4577789999999999999999999999999998765              22333       28999999999999999


Q ss_pred             EEEeecCCCcEEEEeecCCC
Q psy14043        174 KLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       174 ~las~~~d~~i~~wd~~~~~  193 (205)
                      +|+|++.|++|++||+.+++
T Consensus       253 ~l~s~s~D~~v~lWd~~~~~  272 (611)
T 1nr0_A          253 KIASASADKTIKIWNVATLK  272 (611)
T ss_dssp             EEEEEETTSEEEEEETTTTE
T ss_pred             EEEEEeCCCeEEEEeCCCCc
Confidence            99999999999999998764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.42  E-value=4.4e-13  Score=103.71  Aligned_cols=81  Identities=17%  Similarity=0.298  Sum_probs=67.2

Q ss_pred             CCCc-cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        102 PNNT-KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       102 ~~~~-~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .|.. .+..++|+|+++++++|+.|+.+++|++.+.....           ......+|...|.+++|||++++|+||+.
T Consensus        13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~-----------~~~~~~~h~~~v~~~~~sp~g~~l~s~s~   81 (345)
T 3fm0_A           13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWIC-----------KSVLSEGHQRTVRKVAWSPCGNYLASASF   81 (345)
T ss_dssp             CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEE-----------EEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCccee-----------eeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence            3444 78899999999999999999999999998764100           11234689999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.++.
T Consensus        82 D~~v~iw~~~~~~   94 (345)
T 3fm0_A           82 DATTCIWKKNQDD   94 (345)
T ss_dssp             TSCEEEEEECCC-
T ss_pred             CCcEEEEEccCCC
Confidence            9999999987653

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.42  E-value=5.5e-13  Score=102.91  Aligned_cols=78  Identities=13%  Similarity=0.210  Sum_probs=68.0

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceec-eeccc-ceeeEEEEEEcCCCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN-QSLQG-HSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~g-h~~~v~~~~~s~~~~~las~~  179 (205)
                      .+...+.+++|+|++.++++|+.|+.+++||+.++.              .. .++.+ |.+.|.+++|+|+|++|++++
T Consensus       168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~--------------~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~  233 (343)
T 3lrv_A          168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD--------------QASSRFPVDEEAKIKEVKFADNGYWMVVEC  233 (343)
T ss_dssp             CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT--------------SCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC--------------CCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence            344468899999999999999999999999999876              22 56677 999999999999999999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                       |++|++||+.++..
T Consensus       234 -~~~v~iwd~~~~~~  247 (343)
T 3lrv_A          234 -DQTVVCFDLRKDVG  247 (343)
T ss_dssp             -SSBEEEEETTSSTT
T ss_pred             -CCeEEEEEcCCCCc
Confidence             55999999988754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.41  E-value=1.8e-13  Score=107.17  Aligned_cols=80  Identities=18%  Similarity=0.261  Sum_probs=72.9

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ....|...+.+++|+|+++++++|+.|+.+++||..++.              ...++.+|...|.+++|+|+|++|++|
T Consensus        61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~--------------~~~~~~~h~~~v~~~~~s~~g~~las~  126 (380)
T 3iz6_a           61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ--------------KTHAIKLHCPWVMECAFAPNGQSVACG  126 (380)
T ss_dssp             EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--------------EEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred             cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------------cceEEecCCCCEEEEEECCCCCEEEEe
Confidence            345688899999999999999999999999999998876              557888999999999999999999999


Q ss_pred             cCCCcEEEEeecCC
Q psy14043        179 DETGLIIVWMLYKE  192 (205)
Q Consensus       179 ~~d~~i~~wd~~~~  192 (205)
                      +.|++|++||+.+.
T Consensus       127 ~~d~~v~iw~~~~~  140 (380)
T 3iz6_a          127 GLDSACSIFNLSSQ  140 (380)
T ss_dssp             CSSSCCEEEECCCC
T ss_pred             eCCCcEEEEECCCC
Confidence            99999999998764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.41  E-value=3.8e-13  Score=103.80  Aligned_cols=69  Identities=13%  Similarity=0.216  Sum_probs=64.4

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .+.+++|+|+++++++|+.|+.+++||+.+..              ....+.+|...|.+++|+|+|++|+|||.|++|+
T Consensus       272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~  337 (340)
T 1got_B          272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKAD--------------RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK  337 (340)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred             ceEEEEECCCCCEEEEECCCCeEEEEEcccCc--------------EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence            57889999999999999999999999998776              5567899999999999999999999999999999


Q ss_pred             EEe
Q psy14043        186 VWM  188 (205)
Q Consensus       186 ~wd  188 (205)
                      +||
T Consensus       338 iWd  340 (340)
T 1got_B          338 IWN  340 (340)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            997

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.41  E-value=6e-13  Score=102.57  Aligned_cols=80  Identities=13%  Similarity=0.148  Sum_probs=73.4

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+.+++|+|+++++++++.|+.+++|++.++.              ...++.+|...|.+++|+|++++|++++
T Consensus        28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~   93 (369)
T 3zwl_B           28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--------------RLGTLDGHTGTIWSIDVDCFTKYCVTGS   93 (369)
T ss_dssp             EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--------------hhhhhhhcCCcEEEEEEcCCCCEEEEEe
Confidence            34677889999999999999999999999999998876              5678899999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|++||+.+++
T Consensus        94 ~dg~i~iwd~~~~~  107 (369)
T 3zwl_B           94 ADYSIKLWDVSNGQ  107 (369)
T ss_dssp             TTTEEEEEETTTCC
T ss_pred             CCCeEEEEECCCCc
Confidence            99999999998765

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.40  E-value=3.2e-13  Score=103.66  Aligned_cols=60  Identities=18%  Similarity=0.218  Sum_probs=52.8

Q ss_pred             CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEE-EEEEcCCCCEEEeecCCCcEEEEee
Q psy14043        116 QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVR-AIIWNEQYEKLTSSDETGLIIVWML  189 (205)
Q Consensus       116 ~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~-~~~~s~~~~~las~~~d~~i~~wd~  189 (205)
                      +..+++|+.|++|++||+.++.              ...++.+|...+. +++|||||++|+||+.|++|+|||+
T Consensus       295 g~~lASgS~DgTIkIWDl~tGk--------------~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          295 DHCAAAILTSGTIAIWDLLLGQ--------------CTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TTEEEEEETTSCEEEEETTTCS--------------EEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCEEEEEcCCCcEEEEECCCCc--------------EEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            5578999999999999999987              7788999988765 5899999999999999999999996

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.40  E-value=4.3e-13  Score=104.32  Aligned_cols=79  Identities=8%  Similarity=0.098  Sum_probs=65.4

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+.+++|+|+++++++|+.|+.+++|++.+...            ....++.+|...|.+++|+|++++|++++.|+
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~   77 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW------------KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR   77 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE------------EECCCBCCCSSCEEEEEECTTTCCEEEEETTS
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce------------EEEEEEecCCceEEEEEEeCCCCEEEEEeCCC
Confidence            345789999999999999999999999999987620            15578889999999999999999999999999


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      +|++||+.++.
T Consensus        78 ~v~vwd~~~~~   88 (377)
T 3dwl_C           78 NAYVYEKRPDG   88 (377)
T ss_dssp             SEEEC------
T ss_pred             eEEEEEcCCCC
Confidence            99999998866

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.39  E-value=6.5e-13  Score=104.69  Aligned_cols=79  Identities=18%  Similarity=0.249  Sum_probs=72.4

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..+...+.+++|+|+++.+++++.|+.+++||+.++.              ....+.+|...|.+++|+|++++|++++.
T Consensus       136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  201 (420)
T 3vl1_A          136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------------NPRTLIGHRATVTDIAIIDRGRNVLSASL  201 (420)
T ss_dssp             TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------CCEEEECCSSCEEEEEEETTTTEEEEEET
T ss_pred             ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------------CceEEcCCCCcEEEEEEcCCCCEEEEEcC
Confidence            3677789999999999999999999999999999876              55678899999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.+++
T Consensus       202 d~~v~iwd~~~~~  214 (420)
T 3vl1_A          202 DGTIRLWECGTGT  214 (420)
T ss_dssp             TSCEEEEETTTTE
T ss_pred             CCcEEEeECCCCc
Confidence            9999999998764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.39  E-value=4.1e-13  Score=110.04  Aligned_cols=72  Identities=22%  Similarity=0.402  Sum_probs=65.5

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++++++++.|+.|++||.. +.              ...++.+|.+.|++++|+|||++|+|++.|
T Consensus       506 ~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~--------------~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D  570 (577)
T 2ymu_A          506 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ--------------LLQTLTGHSSSVWGVAFSPDGQTIASASSD  570 (577)
T ss_dssp             CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC--------------EEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CC--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence            466778999999999999999999999999964 33              557889999999999999999999999999


Q ss_pred             CcEEEEe
Q psy14043        182 GLIIVWM  188 (205)
Q Consensus       182 ~~i~~wd  188 (205)
                      ++|++||
T Consensus       571 ~~i~~Wd  577 (577)
T 2ymu_A          571 KTVKLWN  577 (577)
T ss_dssp             SCEEEEC
T ss_pred             CEEEEeC
Confidence            9999997

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.39  E-value=3.3e-13  Score=106.27  Aligned_cols=81  Identities=16%  Similarity=0.081  Sum_probs=70.5

Q ss_pred             ccCCCcccccccccc--------CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC
Q psy14043        100 AIPNNTKVNCLAWHQ--------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ  171 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~--------~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~  171 (205)
                      ...|...+++++|+|        +++.+|+++.|+++++||+.+..              ....+.+|...|.+++|+|+
T Consensus       132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--------------~~~~~~~~~~~v~~v~~~p~  197 (393)
T 4gq1_A          132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--------------PILAGYPLSSPGISVQFRPS  197 (393)
T ss_dssp             TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--------------EEEEEEECSSCEEEEEEETT
T ss_pred             cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--------------eeeeecCCCCCcEEEEECCC
Confidence            456788899999997        78999999999999999998765              44567789999999999998


Q ss_pred             CC-EEEeecCCCcEEEEeecCCCC
Q psy14043        172 YE-KLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       172 ~~-~las~~~d~~i~~wd~~~~~~  194 (205)
                      +. +|++|+.|++|++||+.+++.
T Consensus       198 ~~~~l~~~~~d~~v~~wd~~t~~~  221 (393)
T 4gq1_A          198 NPNQLIVGERNGNIRIFDWTLNLS  221 (393)
T ss_dssp             EEEEEEEEETTSEEEEEETTCCC-
T ss_pred             CCceEEecCCCCEEEEEECCCCcc
Confidence            74 799999999999999988754

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.39  E-value=8.1e-13  Score=103.50  Aligned_cols=74  Identities=15%  Similarity=0.212  Sum_probs=65.1

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec----ccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL----QGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+.+++|+|+++++++|+.|+.+++||..++.              ....+    .+|.+.|.+++|||+|++|+|||.|
T Consensus       300 ~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~--------------~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D  365 (380)
T 3iz6_a          300 IVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE--------------MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD  365 (380)
T ss_dssp             SCSEEEECSSSSEEEEECTTSCEEEEETTTCC--------------EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred             ceEEEEECCCCCEEEEEECCCCEEEEECCCCc--------------eEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence            36788999999999999999999999987765              22233    6899999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+..++
T Consensus       366 ~~i~iW~~~~~~  377 (380)
T 3iz6_a          366 KNLKIWAFSGHR  377 (380)
T ss_dssp             SCEEEEECCSSS
T ss_pred             CCEEEEecCCCc
Confidence            999999987654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.39  E-value=9.7e-13  Score=99.98  Aligned_cols=79  Identities=23%  Similarity=0.374  Sum_probs=72.3

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..+...+.+++|+|+++.+++++.|+.+++||+.++.              ....+.+|...|.+++|+|++++|++|+.
T Consensus        62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~  127 (312)
T 4ery_A           62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--------------CLKTLKGHSNYVFCCNFNPQSNLIVSGSF  127 (312)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred             ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence            4566778999999999999999999999999998876              56788999999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.+++
T Consensus       128 d~~i~iwd~~~~~  140 (312)
T 4ery_A          128 DESVRIWDVKTGK  140 (312)
T ss_dssp             TSCEEEEETTTCC
T ss_pred             CCcEEEEECCCCE
Confidence            9999999998765

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.39  E-value=7.1e-13  Score=105.05  Aligned_cols=74  Identities=16%  Similarity=0.280  Sum_probs=64.7

Q ss_pred             ccccccccccCCCeeeec--ccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        105 TKVNCLAWHQNQGWIAVG--GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg--~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      ..+..+.|+++++.++++  +.|+.|++||+.+..              ...++.||.+.|++++|||||++|+|||.|+
T Consensus       321 ~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--------------~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~  386 (420)
T 4gga_A          321 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--------------KVAELKGHTSRVLSLTMSPDGATVASAAADE  386 (420)
T ss_dssp             SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred             cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEecCC
Confidence            356677889998877664  479999999999876              6678999999999999999999999999999


Q ss_pred             cEEEEeecCC
Q psy14043        183 LIIVWMLYKE  192 (205)
Q Consensus       183 ~i~~wd~~~~  192 (205)
                      +|++||+...
T Consensus       387 tvriWdv~~~  396 (420)
T 4gga_A          387 TLRLWRCFEL  396 (420)
T ss_dssp             EEEEECCSCS
T ss_pred             eEEEEECCCC
Confidence            9999998653

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.38  E-value=9.3e-13  Score=101.68  Aligned_cols=87  Identities=15%  Similarity=0.113  Sum_probs=71.3

Q ss_pred             ccCCCcccccccc-----cc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC
Q psy14043        100 AIPNNTKVNCLAW-----HQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE  173 (205)
Q Consensus       100 ~~~~~~~~~~~~~-----~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~  173 (205)
                      ...|...+.++.|     ++ +++++++|+.|+++++|++.+......       .......+.+|...|.+++|+|++.
T Consensus        17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-------~~~~~~~l~~h~~~V~~~~~~~~~~   89 (343)
T 2xzm_R           17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-------FGIPHKALTGHNHFVSDLALSQENC   89 (343)
T ss_dssp             EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-------SEEEEEEECCCSSCEEEEEECSSTT
T ss_pred             eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-------cccccchhccCCCceEEEEECCCCC
Confidence            3467778999988     66 889999999999999999976432100       0013457899999999999999999


Q ss_pred             EEEeecCCCcEEEEeecCCC
Q psy14043        174 KLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       174 ~las~~~d~~i~~wd~~~~~  193 (205)
                      +|+||+.|++|++||+.+++
T Consensus        90 ~l~s~s~D~~v~lwd~~~~~  109 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRTGT  109 (343)
T ss_dssp             EEEEEETTSEEEEEETTSSC
T ss_pred             EEEEEcCCCcEEEEECCCCc
Confidence            99999999999999998765

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.38  E-value=7.8e-13  Score=109.79  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=70.3

Q ss_pred             cCCCccccccccccCCC-eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...+.+++|+|++. .+++|+.|+.+++|+..+..              ...++.+|...|.+++|+|||++||||+
T Consensus       144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--------------~~~~l~~H~~~V~~v~fspdg~~las~s  209 (611)
T 1nr0_A          144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--------------FKSTFGEHTKFVHSVRYNPDGSLFASTG  209 (611)
T ss_dssp             CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--------------EeeeeccccCceEEEEECCCCCEEEEEE
Confidence            45677899999999987 59999999999999987654              5578899999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|++||+.+++
T Consensus       210 ~D~~i~lwd~~~g~  223 (611)
T 1nr0_A          210 GDGTIVLYNGVDGT  223 (611)
T ss_dssp             TTSCEEEEETTTCC
T ss_pred             CCCcEEEEECCCCc
Confidence            99999999987664

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.38  E-value=9.2e-13  Score=100.42  Aligned_cols=93  Identities=18%  Similarity=0.406  Sum_probs=72.0

Q ss_pred             CCCccccccccccCC----CeeeecccccceEEEEecCCCCcchhh--------------------------------hh
Q psy14043        102 PNNTKVNCLAWHQNQ----GWIAVGGDDGLLKVLKLDTGKESTGQV--------------------------------AA  145 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~----~~lasg~~d~~i~iw~~~~~~~~~~~~--------------------------------~~  145 (205)
                      .+...+.+++|+|++    +++++++.|+.+++||+.+........                                ..
T Consensus       212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (351)
T 3f3f_A          212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ  291 (351)
T ss_dssp             CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred             CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence            466788999999998    899999999999999998753211100                                00


Q ss_pred             hcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        146 ANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       146 ~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                      ..........+.+|...|++++|+|++++|+||+.||+|++||+.++..
T Consensus       292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~  340 (351)
T 3f3f_A          292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE  340 (351)
T ss_dssp             CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred             ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence            0111235567889999999999999999999999999999999988653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.37  E-value=7.9e-13  Score=101.10  Aligned_cols=93  Identities=17%  Similarity=0.280  Sum_probs=66.1

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh--------hhhcc----------cc------------
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV--------AAANV----------NL------------  150 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~--------~~~~~----------~~------------  150 (205)
                      ..+...+.+++|+|+++++++|+.|+.+++||+.+........        ...+.          .+            
T Consensus       212 ~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~  291 (340)
T 4aow_A          212 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD  291 (340)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred             cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence            3466678999999999999999999999999987654211000        00000          00            


Q ss_pred             -----eeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        151 -----AMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       151 -----~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                           .......+|...|++++|+|||++|+||+.||+|+|||+.+|.
T Consensus       292 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          292 ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             eccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence                 0112345789999999999999999999999999999999875

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.37  E-value=9.1e-13  Score=107.21  Aligned_cols=75  Identities=19%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee-----eEEEEEEcCCCCEEE
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG-----KVRAIIWNEQYEKLT  176 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~-----~v~~~~~s~~~~~la  176 (205)
                      .+...+.+++|+|+|..+|+++.||.+++|+.++                +...+. |..     .|.+++|||||++||
T Consensus        83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----------------~l~~l~-~~~~~~~~sv~svafSPDG~~LA  145 (588)
T 2j04_A           83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----------------MLTNLD-SKGNLSSRTYHCFEWNPIESSIV  145 (588)
T ss_dssp             SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----------------EEEECC-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----------------eeeecc-CCCccccccEEEEEEcCCCCEEE
Confidence            3466799999999999999999999999999433                223455 554     599999999999999


Q ss_pred             eecCCCcEEEEeecCCC
Q psy14043        177 SSDETGLIIVWMLYKEK  193 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~  193 (205)
                      +|+.||+|++||+.++.
T Consensus       146 sgs~DGtVkIWd~~~~~  162 (588)
T 2j04_A          146 VGNEDGELQFFSIRKNS  162 (588)
T ss_dssp             EEETTSEEEEEECCCCT
T ss_pred             EEcCCCEEEEEECCCCc
Confidence            99999999999998864

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.36  E-value=1.2e-12  Score=101.74  Aligned_cols=69  Identities=16%  Similarity=0.209  Sum_probs=63.7

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .+.++.|+|++.++++|+.|+.+++||+.++.              ....+.+|...|.+++|||+|++|+||+.|++|+
T Consensus       286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~--------------~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~  351 (354)
T 2pbi_B          286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGS--------------RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR  351 (354)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTCS--------------EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred             ceeEEEEeCCCCEEEEEECCCcEEEEECCCCc--------------eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence            46788899999999999999999999998776              4567889999999999999999999999999999


Q ss_pred             EEe
Q psy14043        186 VWM  188 (205)
Q Consensus       186 ~wd  188 (205)
                      +|+
T Consensus       352 vW~  354 (354)
T 2pbi_B          352 VWA  354 (354)
T ss_dssp             EEC
T ss_pred             ecC
Confidence            996

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.36  E-value=2.9e-12  Score=97.04  Aligned_cols=81  Identities=25%  Similarity=0.511  Sum_probs=67.3

Q ss_pred             CCCccccccccccC-------------CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEE
Q psy14043        102 PNNTKVNCLAWHQN-------------QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW  168 (205)
Q Consensus       102 ~~~~~~~~~~~~~~-------------~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~  168 (205)
                      .+...+.+++|+|+             ++.+++|+.|+.+++||+++....          .....++.+|...|.+++|
T Consensus       143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~----------~~~~~~l~~H~~~V~~v~~  212 (297)
T 2pm7_B          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWVRDVAW  212 (297)
T ss_dssp             CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCEEEEEE
T ss_pred             cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce----------EEEEEEecCCCCceEEEEE
Confidence            45567788889986             579999999999999999875411          1134578899999999999


Q ss_pred             cCCC---CEEEeecCCCcEEEEeecCC
Q psy14043        169 NEQY---EKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       169 s~~~---~~las~~~d~~i~~wd~~~~  192 (205)
                      +|++   ++||||+.|++|++||+.++
T Consensus       213 sp~~~~~~~las~s~D~~v~iWd~~~~  239 (297)
T 2pm7_B          213 SPTVLLRSYMASVSQDRTCIIWTQDNE  239 (297)
T ss_dssp             CCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred             CCCCCCceEEEEEECCCcEEEEEeCCC
Confidence            9984   89999999999999999774

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.36  E-value=1.8e-12  Score=99.85  Aligned_cols=83  Identities=13%  Similarity=0.349  Sum_probs=72.3

Q ss_pred             cccCCCccccccccccC---CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE
Q psy14043         99 IAIPNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL  175 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~---~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l  175 (205)
                      ....|...+.+++|+|+   ++++++|+.|+.+++|++.+...            .....+.+|...|.+++|+|++++|
T Consensus        34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~l  101 (368)
T 3mmy_A           34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------------TIPKAQQMHTGPVLDVCWSDDGSKV  101 (368)
T ss_dssp             CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------------EEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------------eeEEEeccccCCEEEEEECcCCCEE
Confidence            44567889999999999   59999999999999999987321            1336788999999999999999999


Q ss_pred             EeecCCCcEEEEeecCCC
Q psy14043        176 TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       176 as~~~d~~i~~wd~~~~~  193 (205)
                      ++++.|++|++||+.++.
T Consensus       102 ~s~~~dg~v~iwd~~~~~  119 (368)
T 3mmy_A          102 FTASCDKTAKMWDLSSNQ  119 (368)
T ss_dssp             EEEETTSEEEEEETTTTE
T ss_pred             EEEcCCCcEEEEEcCCCC
Confidence            999999999999998765

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.35  E-value=1.2e-12  Score=101.35  Aligned_cols=82  Identities=18%  Similarity=0.322  Sum_probs=71.8

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC--CCEEEe
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLTS  177 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~--~~~las  177 (205)
                      ...|...+.+++|+|+++++++|+.|+.+++|++.....            .....+.+|...|.+++|+++  +++|++
T Consensus         7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s   74 (379)
T 3jrp_A            7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------------KLIDTLTGHEGPVWRVDWAHPKFGTILAS   74 (379)
T ss_dssp             EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------------EEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred             ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------------eeeeEecCCCCcEEEEEeCCCCCCCEEEE
Confidence            346778899999999999999999999999999984321            155678899999999999987  999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.|++|++||+.++.
T Consensus        75 ~~~dg~v~iwd~~~~~   90 (379)
T 3jrp_A           75 CSYDGKVLIWKEENGR   90 (379)
T ss_dssp             EETTSCEEEEEEETTE
T ss_pred             eccCCEEEEEEcCCCc
Confidence            9999999999998875

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.35  E-value=1.3e-12  Score=101.53  Aligned_cols=79  Identities=24%  Similarity=0.294  Sum_probs=71.1

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeecC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~~  180 (205)
                      .|...+.+++|+|+++++++|+.|+.+++||+.++.              ....+.+|...|.+++|++++. .+++++.
T Consensus       137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--------------~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~  202 (357)
T 4g56_B          137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--------------VLKSYNAHSSEVNCVAACPGKDTIFLSCGE  202 (357)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTCSSCEEEEET
T ss_pred             CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEcCCCCCEEEEEEccCCCceeeeecc
Confidence            456678999999999999999999999999999876              6678899999999999999875 7999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |++|++||+.+++.
T Consensus       203 dg~v~~wd~~~~~~  216 (357)
T 4g56_B          203 DGRILLWDTRKPKP  216 (357)
T ss_dssp             TSCEEECCTTSSSC
T ss_pred             CCceEEEECCCCce
Confidence            99999999988654

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.35  E-value=2.3e-12  Score=100.06  Aligned_cols=78  Identities=17%  Similarity=0.286  Sum_probs=68.4

Q ss_pred             CCCcccccccccc--CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~--~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      .+...+.++.+++  ++..+++|+.|+.+++||+.++.              ...++.+|...|.+++|+|++..|+||+
T Consensus       194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s  259 (354)
T 2pbi_B          194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ--------------CVQAFETHESDVNSVRYYPSGDAFASGS  259 (354)
T ss_dssp             CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEecCCCCCeEEEEEeCCCCEEEEEe
Confidence            4556677777776  56899999999999999999876              5678899999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|++||+.++.
T Consensus       260 ~D~~v~lwd~~~~~  273 (354)
T 2pbi_B          260 DDATCRLYDLRADR  273 (354)
T ss_dssp             TTSCEEEEETTTTE
T ss_pred             CCCeEEEEECCCCc
Confidence            99999999997653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.35  E-value=1.2e-12  Score=110.05  Aligned_cols=76  Identities=17%  Similarity=0.299  Sum_probs=69.5

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .|...+.++.|+++++++++|+.|+.+++||+.++.              ...++.+|...|.+++|+|++++|+|||.|
T Consensus       428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--------------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D  493 (694)
T 3dm0_A          428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--------------STRRFVGHTKDVLSVAFSLDNRQIVSASRD  493 (694)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc--------------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCC
Confidence            466678899999999999999999999999998876              557889999999999999999999999999


Q ss_pred             CcEEEEeecC
Q psy14043        182 GLIIVWMLYK  191 (205)
Q Consensus       182 ~~i~~wd~~~  191 (205)
                      ++|++||+..
T Consensus       494 ~~i~iwd~~~  503 (694)
T 3dm0_A          494 RTIKLWNTLG  503 (694)
T ss_dssp             SCEEEECTTS
T ss_pred             CEEEEEECCC
Confidence            9999999754

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.35  E-value=1.4e-12  Score=112.78  Aligned_cols=90  Identities=11%  Similarity=0.097  Sum_probs=70.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcch-------h---------h---------------hhhcccc
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTG-------Q---------V---------------AAANVNL  150 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~-------~---------~---------------~~~~~~~  150 (205)
                      .+...+.+++|+|+++++|+|+.|++|++|++.+......       .         .               ......+
T Consensus       486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  565 (902)
T 2oaj_A          486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF  565 (902)
T ss_dssp             SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred             CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence            4566799999999999999999999999999987631000       0         0               0000112


Q ss_pred             eeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        151 AMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       151 ~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                      ....++.+|.+.|++++||||| +||+|+.|++|++||+.+.
T Consensus       566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~  606 (902)
T 2oaj_A          566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP  606 (902)
T ss_dssp             EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred             ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence            3456788999999999999999 9999999999999998664

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.35  E-value=1.8e-12  Score=98.17  Aligned_cols=72  Identities=15%  Similarity=0.348  Sum_probs=61.7

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceece--ecccceeeEEEEEEcCCCCEEEeecCCCc
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ--SLQGHSGKVRAIIWNEQYEKLTSSDETGL  183 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~gh~~~v~~~~~s~~~~~las~~~d~~  183 (205)
                      ..++++|++++ .+|+| .|++|++||+.++.              ..+  .+.+|...|.+++|+|++++|+||+.|++
T Consensus        27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~--------------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~   90 (318)
T 4ggc_A           27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE   90 (318)
T ss_dssp             TCBCEEECTTS-EEEEE-ETTEEEEEETTTCC--------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSE
T ss_pred             cceEEEECCCC-EEEEE-eCCEEEEEECCCCC--------------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCc
Confidence            35789999876 77776 59999999999886              334  34678999999999999999999999999


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      |++||+.+++
T Consensus        91 v~iw~~~~~~  100 (318)
T 4ggc_A           91 VQLWDVQQQK  100 (318)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEeecCCce
Confidence            9999998875

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.34  E-value=7e-13  Score=104.39  Aligned_cols=77  Identities=17%  Similarity=0.170  Sum_probs=61.2

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC--------CCCEEEeec
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--------QYEKLTSSD  179 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~--------~~~~las~~  179 (205)
                      ....+.+++..+++++.|+++++|+.+++....         ......+.||++.|++++|+|        |+++|||||
T Consensus        93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~---------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s  163 (393)
T 4gq1_A           93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIIT---------QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG  163 (393)
T ss_dssp             ----CCEEEEEEEEEETTSCEEEEEEETTEEEE---------EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred             ceeecCCCCCEEEEEeCCCcEEEEECCCCccce---------eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence            344466677899999999999999998775211         113456899999999999998        899999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|+|||+.++.
T Consensus       164 ~D~tv~~Wd~~~~~  177 (393)
T 4gq1_A          164 DDCTLIIWRLTDEG  177 (393)
T ss_dssp             TTSEEEEEEEETTE
T ss_pred             CCCeEEEEECCCCc
Confidence            99999999997654

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.33  E-value=2.2e-12  Score=104.96  Aligned_cols=79  Identities=22%  Similarity=0.449  Sum_probs=64.4

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec----ccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL----QGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+.+++|+|+|+++|+|+.||.+++|++.++....       ..+....++    .||...|.+++|||||  |++++.|
T Consensus       131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~-------~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D  201 (588)
T 2j04_A          131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT-------PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN  201 (588)
T ss_dssp             CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC-------CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT
T ss_pred             cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc-------ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC
Confidence            48899999999999999999999999998764100       000012444    7899999999999999  8899999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+..+.
T Consensus       202 ~tVrlWd~~~~~  213 (588)
T 2j04_A          202 NSVFSMTVSASS  213 (588)
T ss_dssp             CCEEEECCCSSS
T ss_pred             CeEEEEECCCCc
Confidence            999999998766

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.33  E-value=3.4e-12  Score=100.43  Aligned_cols=86  Identities=23%  Similarity=0.345  Sum_probs=71.6

Q ss_pred             cCCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEee
Q psy14043        101 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~  178 (205)
                      ..|...+.+++|+| ++..+++|+.|+.+++|++.+......       .......+.+|...|.+++|+|++ ..|+|+
T Consensus        78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~-------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~  150 (402)
T 2aq5_A           78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP-------LREPVITLEGHTKRVGIVAWHPTAQNVLLSA  150 (402)
T ss_dssp             CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC-------BCSCSEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred             ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc-------cCCceEEecCCCCeEEEEEECcCCCCEEEEE
Confidence            45777899999999 899999999999999999987631100       001346788999999999999998 699999


Q ss_pred             cCCCcEEEEeecCCC
Q psy14043        179 DETGLIIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~  193 (205)
                      +.|++|++||+.+++
T Consensus       151 ~~dg~i~iwd~~~~~  165 (402)
T 2aq5_A          151 GCDNVILVWDVGTGA  165 (402)
T ss_dssp             ETTSCEEEEETTTTE
T ss_pred             cCCCEEEEEECCCCC
Confidence            999999999998764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.32  E-value=4.9e-13  Score=104.36  Aligned_cols=85  Identities=22%  Similarity=0.172  Sum_probs=62.0

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||+|                               |+.++|||||||++|||++|+.||.......     .
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~  293 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----C  293 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----E
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----e
Confidence            689999999998                               3889999999999999999999996432210     0


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      .....+..   ...++...+++.+||..+|.+|+...+.+.+.+
T Consensus       294 ~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l  334 (365)
T 3e7e_A          294 KPEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL  334 (365)
T ss_dssp             EECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred             eechhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence            00111111   124678999999999999999987655555433

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.31  E-value=5.2e-12  Score=96.50  Aligned_cols=80  Identities=24%  Similarity=0.457  Sum_probs=66.2

Q ss_pred             cCCCccccccccccC-----------------CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeE
Q psy14043        101 IPNNTKVNCLAWHQN-----------------QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV  163 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~-----------------~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v  163 (205)
                      ..+...+.++.|+|+                 ++.+++|+.|+.+++|++.+...           .....++.+|...|
T Consensus       147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-----------~~~~~~l~~h~~~V  215 (316)
T 3bg1_A          147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-----------WKEEQKLEAHSDWV  215 (316)
T ss_dssp             TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-----------EEEEECCBCCSSCE
T ss_pred             ccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc-----------cceeeecccCCCce
Confidence            345567788888887                 46899999999999999975421           11346788999999


Q ss_pred             EEEEEcCCC----CEEEeecCCCcEEEEeecC
Q psy14043        164 RAIIWNEQY----EKLTSSDETGLIIVWMLYK  191 (205)
Q Consensus       164 ~~~~~s~~~----~~las~~~d~~i~~wd~~~  191 (205)
                      .+++|+|++    ++|+||+.|++|++||+.+
T Consensus       216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             EEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred             EEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence            999999986    8899999999999999876

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.30  E-value=3.2e-12  Score=98.57  Aligned_cols=82  Identities=9%  Similarity=0.103  Sum_probs=68.4

Q ss_pred             ccCCCcccccccccc--CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec-ccceeeEEEEEEcCCCCEEE
Q psy14043        100 AIPNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHSGKVRAIIWNEQYEKLT  176 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~--~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~gh~~~v~~~~~s~~~~~la  176 (205)
                      ...+...+.+++++|  +++++++++.|+.+++||+.++.              ..... ..|...|.+++|+|+|++|+
T Consensus       121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------------~~~~~~~~~~~~i~~~~~~pdg~~la  186 (343)
T 3lrv_A          121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------------QYIVHSAKSDVEYSSGVLHKDSLLLA  186 (343)
T ss_dssp             ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------------EEEEECCCSSCCCCEEEECTTSCEEE
T ss_pred             ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------------EEEEEecCCCCceEEEEECCCCCEEE
Confidence            335556799999999  99999999999999999999876              22333 34566899999999999999


Q ss_pred             eecCCCcEEEEeecCCCCC
Q psy14043        177 SSDETGLIIVWMLYKEKNP  195 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~~~  195 (205)
                      +|+.|++|++||+.++...
T Consensus       187 sg~~dg~i~iwd~~~~~~~  205 (343)
T 3lrv_A          187 LYSPDGILDVYNLSSPDQA  205 (343)
T ss_dssp             EECTTSCEEEEESSCTTSC
T ss_pred             EEcCCCEEEEEECCCCCCC
Confidence            9999999999999987654

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.30  E-value=1.9e-12  Score=105.67  Aligned_cols=72  Identities=8%  Similarity=0.012  Sum_probs=65.6

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      +.+++|+|+++.+++++.|+++++||+.+..              ...++.+|.+.|++++|||+|+.|+||+.|++|++
T Consensus       358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~--------------~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l  423 (524)
T 2j04_B          358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAF--------------AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLII  423 (524)
T ss_dssp             CCCEEEETTTTEEEEECSSSEEEEEETTCTT--------------CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred             ccceEeCCCcCeEEEeCCCCcEEEEECcccc--------------cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence            6788999999999999999999999998875              44678899999999999999999999999999999


Q ss_pred             EeecCC
Q psy14043        187 WMLYKE  192 (205)
Q Consensus       187 wd~~~~  192 (205)
                      ||+..+
T Consensus       424 wd~~~~  429 (524)
T 2j04_B          424 TNAARR  429 (524)
T ss_dssp             CBSCSS
T ss_pred             EechHh
Confidence            998654

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.29  E-value=3.4e-12  Score=101.62  Aligned_cols=82  Identities=17%  Similarity=0.143  Sum_probs=68.5

Q ss_pred             CCCccccccccccCCC-eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        102 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .|...+.+++|+|++. .+++|+.|+.+++||+.+.....           ......+|...|++++|+|+|++|+|++.
T Consensus       248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-----------~~~~~~~h~~~v~~~~~spdg~~l~s~~~  316 (435)
T 4e54_B          248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-----------SFLYSLPHRHPVNAACFSPDGARLLTTDQ  316 (435)
T ss_dssp             CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS-----------CCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred             cccceEEeeeecCCCceEEEEecCcceeeEEecccccccc-----------eEEEeeeccccccceeECCCCCeeEEEcC
Confidence            4566789999999985 78899999999999998765221           22344689999999999999999999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |++|++||+.++..
T Consensus       317 D~~i~iwd~~~~~~  330 (435)
T 4e54_B          317 KSEIRVYSASQWDC  330 (435)
T ss_dssp             SSCEEEEESSSSSS
T ss_pred             CCEEEEEECCCCcc
Confidence            99999999987653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.29  E-value=4.6e-12  Score=101.17  Aligned_cols=75  Identities=16%  Similarity=0.277  Sum_probs=66.6

Q ss_pred             CCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        102 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .|...+.+++|+|+ +..+++++.|+.+++||+.+..              ......+|...|.+++|||+|++|++|+.
T Consensus       147 ~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--------------~~~~~~~~~~~v~~v~wspdg~~lasgs~  212 (434)
T 2oit_A          147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--------------KVCATLPSTVAVTSVCWSPKGKQLAVGKQ  212 (434)
T ss_dssp             SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--------------EEEEEECGGGCEEEEEECTTSSCEEEEET
T ss_pred             CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--------------ceeeccCCCCceeEEEEcCCCCEEEEEcC
Confidence            45678999999998 7899999999999999998764              33455679999999999999999999999


Q ss_pred             CCcEEEEeec
Q psy14043        181 TGLIIVWMLY  190 (205)
Q Consensus       181 d~~i~~wd~~  190 (205)
                      ||+|++||+.
T Consensus       213 dg~v~iwd~~  222 (434)
T 2oit_A          213 NGTVVQYLPT  222 (434)
T ss_dssp             TSCEEEECTT
T ss_pred             CCcEEEEccC
Confidence            9999999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.29  E-value=7e-13  Score=111.52  Aligned_cols=85  Identities=19%  Similarity=0.249  Sum_probs=65.6

Q ss_pred             CCCeEEEEecCCCC------------------------CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCC
Q psy14043          2 NGAVLKLIDLGSSA------------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF   57 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~------------------------~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~   57 (205)
                      .++.+||+|||++.                        +.++|||||||++|+|++|.+||.+....           ..
T Consensus       216 ~~~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------~~  284 (681)
T 2pzi_A          216 TEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD-----------GL  284 (681)
T ss_dssp             CSSCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS-----------SC
T ss_pred             eCCcEEEEecccchhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc-----------cc
Confidence            35689999999882                        66899999999999999999998753110           01


Q ss_pred             CC-CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         58 PP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        58 ~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      +. ......++.+.++|.+||..+|.+||+..+.+.++|..
T Consensus       285 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          285 PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            11 00112467899999999999999999999988888864

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.28  E-value=1e-11  Score=95.68  Aligned_cols=79  Identities=18%  Similarity=0.279  Sum_probs=65.5

Q ss_pred             CCccccccccccC--CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccc--eeeEEEEEEcCCCCEEEee
Q psy14043        103 NNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH--SGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       103 ~~~~~~~~~~~~~--~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh--~~~v~~~~~s~~~~~las~  178 (205)
                      +...+.+++|+|+  ++++++|+.|+.+++|++.++....          .....+.+|  ...|.+++|+|++++|+++
T Consensus       284 ~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~  353 (366)
T 3k26_A          284 SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK----------AKCTTLTHHKCGAAIRQTSFSRDSSILIAV  353 (366)
T ss_dssp             SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG----------CEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred             cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc----------ccceEEcccccCCceEEEEeCCCCCeEEEE
Confidence            4556888999999  9999999999999999998865211          123466777  7999999999999999999


Q ss_pred             cCCCcEEEEeecC
Q psy14043        179 DETGLIIVWMLYK  191 (205)
Q Consensus       179 ~~d~~i~~wd~~~  191 (205)
                      +.||.|++||+.+
T Consensus       354 ~~dg~i~iwd~~~  366 (366)
T 3k26_A          354 CDDASIWRWDRLR  366 (366)
T ss_dssp             ETTSEEEEEEC--
T ss_pred             eCCCEEEEEEecC
Confidence            9999999999853

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.28  E-value=7.3e-12  Score=111.28  Aligned_cols=79  Identities=20%  Similarity=0.307  Sum_probs=73.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++|+.|+.+++|+..++.              ...++.+|.+.|.+++|||+|++|+||+.
T Consensus       612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~--------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~  677 (1249)
T 3sfz_A          612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE--------------KLLDIKAHEDEVLCCAFSSDDSYIATCSA  677 (1249)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--------------EEEEeccCCCCEEEEEEecCCCEEEEEeC
Confidence            3567789999999999999999999999999999886              56788899999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.+++
T Consensus       678 d~~v~vwd~~~~~  690 (1249)
T 3sfz_A          678 DKKVKIWDSATGK  690 (1249)
T ss_dssp             TSEEEEEETTTCC
T ss_pred             CCeEEEEECCCCc
Confidence            9999999998875

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.28  E-value=6.6e-12  Score=98.77  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=70.2

Q ss_pred             CCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceec--ccceeeEEEEEEcCCCCEEEee
Q psy14043        102 PNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL--QGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~gh~~~v~~~~~s~~~~~las~  178 (205)
                      .+...+.+++|+|++ ..+++++.|+.+++||+.++.              ...++  .+|...|.+++|+|++++|+++
T Consensus       129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  194 (402)
T 2aq5_A          129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--------------AVLTLGPDVHPDTIYSVDWSRDGALICTS  194 (402)
T ss_dssp             CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--------------EEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred             CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--------------ccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence            466788999999998 699999999999999998875              45667  7899999999999999999999


Q ss_pred             cCCCcEEEEeecCCC
Q psy14043        179 DETGLIIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~  193 (205)
                      +.|++|++||+.++.
T Consensus       195 ~~d~~i~iwd~~~~~  209 (402)
T 2aq5_A          195 CRDKRVRVIEPRKGT  209 (402)
T ss_dssp             ETTSEEEEEETTTTE
T ss_pred             ecCCcEEEEeCCCCc
Confidence            999999999998765

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.27  E-value=7.2e-12  Score=105.37  Aligned_cols=77  Identities=25%  Similarity=0.410  Sum_probs=69.0

Q ss_pred             CCccccccccccCC--CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        103 NNTKVNCLAWHQNQ--GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       103 ~~~~~~~~~~~~~~--~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      |...+.++.|+|++  ..+++++.|+.+++||+.+..              ...++.+|.+.|++++|||++++|+||+.
T Consensus       516 h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--------------~~~~~~~h~~~v~~v~~spdg~~l~sg~~  581 (694)
T 3dm0_A          516 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--------------LRSTLAGHTGYVSTVAVSPDGSLCASGGK  581 (694)
T ss_dssp             CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--------------EEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence            44567889999986  579999999999999998776              56788999999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.+++
T Consensus       582 Dg~i~iwd~~~~~  594 (694)
T 3dm0_A          582 DGVVLLWDLAEGK  594 (694)
T ss_dssp             TSBCEEEETTTTE
T ss_pred             CCeEEEEECCCCc
Confidence            9999999998765

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.27  E-value=7.8e-12  Score=98.33  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=68.1

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC------CCCEE
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE------QYEKL  175 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~------~~~~l  175 (205)
                      .+...+.++++++++.++++|+.|+.+++||..++.              ....+.+|...|.+++|++      ++..|
T Consensus       308 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~--------------~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l  373 (393)
T 1erj_A          308 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--------------PLLMLQGHRNSVISVAVANGSSLGPEYNVF  373 (393)
T ss_dssp             CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred             cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe--------------EEEEECCCCCCEEEEEecCCcCcCCCCCEE
Confidence            455678889999999999999999999999998876              5578899999999999986      68899


Q ss_pred             EeecCCCcEEEEeecC
Q psy14043        176 TSSDETGLIIVWMLYK  191 (205)
Q Consensus       176 as~~~d~~i~~wd~~~  191 (205)
                      +||+.|++|++||+.+
T Consensus       374 ~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          374 ATGSGDCKARIWKYKK  389 (393)
T ss_dssp             EEEETTSEEEEEEEEE
T ss_pred             EEECCCCcEEECcccc
Confidence            9999999999999865

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.27  E-value=1.1e-11  Score=97.44  Aligned_cols=80  Identities=10%  Similarity=0.140  Sum_probs=72.3

Q ss_pred             CCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEeec
Q psy14043        102 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~~  179 (205)
                      .+...+.+++|+| +++++++++.|+.+++||+.+..              ...++.+|...|.+++|+|++ ++|++++
T Consensus       260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~  325 (416)
T 2pm9_A          260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE--------------QLSQFPARGNWCFKTKFAPEAPDLFACAS  325 (416)
T ss_dssp             CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC--------------EEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred             CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc--------------cceeecCCCCceEEEEECCCCCCEEEEEe
Confidence            5667889999999 89999999999999999998876              567888999999999999999 8999999


Q ss_pred             CCCcEEEEeecCCCCC
Q psy14043        180 ETGLIIVWMLYKEKNP  195 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~~  195 (205)
                      .|++|++||+.+...+
T Consensus       326 ~d~~i~iw~~~~~~~~  341 (416)
T 2pm9_A          326 FDNKIEVQTLQNLTNT  341 (416)
T ss_dssp             SSSEEEEEESCCCCCS
T ss_pred             cCCcEEEEEccCCCCC
Confidence            9999999999886643

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.27  E-value=8.7e-12  Score=95.80  Aligned_cols=91  Identities=12%  Similarity=0.142  Sum_probs=72.0

Q ss_pred             CCCccccccccccCCC-eeeecccccceEEEEecCCCCcchh-----hhhhcccceeceecccceeeEEEEEEcCCCCEE
Q psy14043        102 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQ-----VAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL  175 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l  175 (205)
                      .+...+.++.|+|+++ ++++++.|+.+++|++.+.......     .............+.+|...|.+++|+|++++|
T Consensus       257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  336 (357)
T 3i2n_A          257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL  336 (357)
T ss_dssp             CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred             CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence            5677889999999998 8999999999999999876532111     111112234567789999999999999999999


Q ss_pred             E-eecCCCcEEEEeecCC
Q psy14043        176 T-SSDETGLIIVWMLYKE  192 (205)
Q Consensus       176 a-s~~~d~~i~~wd~~~~  192 (205)
                      + |++.|+.|++||+.+.
T Consensus       337 ~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          337 CVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             EEEEETTSEEEEEEECC-
T ss_pred             EEEecCCCcEEEEECCCc
Confidence            8 8999999999999764

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.27  E-value=6.7e-12  Score=103.27  Aligned_cols=76  Identities=21%  Similarity=0.446  Sum_probs=68.0

Q ss_pred             CCcccccccccc----------CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC
Q psy14043        103 NNTKVNCLAWHQ----------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY  172 (205)
Q Consensus       103 ~~~~~~~~~~~~----------~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~  172 (205)
                      +...+.+++|+|          +++++++++.|+.+++|++.+...             ....+.+|...|.+++|+|++
T Consensus       530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~h~~~v~~l~~s~~~  596 (615)
T 1pgu_A          530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-------------IIKALNAHKDGVNNLLWETPS  596 (615)
T ss_dssp             CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC-------------CEEETTSSTTCEEEEEEEETT
T ss_pred             CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCce-------------echhhhcCccceEEEEEcCCC
Confidence            777899999999          999999999999999999988631             456789999999999999999


Q ss_pred             CEEEeecCCCcEEEEeecCC
Q psy14043        173 EKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~~~~  192 (205)
                      + |+|++.|++|++||+.++
T Consensus       597 ~-l~s~~~d~~v~iw~~~~~  615 (615)
T 1pgu_A          597 T-LVSSGADACIKRWNVVLE  615 (615)
T ss_dssp             E-EEEEETTSCEEEEEEC--
T ss_pred             C-eEEecCCceEEEEeeecC
Confidence            9 999999999999998753

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.26  E-value=1.1e-11  Score=96.87  Aligned_cols=77  Identities=17%  Similarity=0.104  Sum_probs=67.1

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc------cc---------------ee
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ------GH---------------SG  161 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~------gh---------------~~  161 (205)
                      +...+.++.|+|+++++++++.|+.+++||+.+..              ....+.      +|               ..
T Consensus       290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  355 (397)
T 1sq9_A          290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE--------------RITTLNMHCDDIEIEEDILAVDEHGDSLAEP  355 (397)
T ss_dssp             BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc--------------eeEEEecccCcccchhhhhccccccccccCC
Confidence            66788999999999999999999999999998775              344555      66               99


Q ss_pred             eEEEEEEcCCC----------CEEEeecCCCcEEEEeecCCC
Q psy14043        162 KVRAIIWNEQY----------EKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       162 ~v~~~~~s~~~----------~~las~~~d~~i~~wd~~~~~  193 (205)
                      .|.+++|+|++          ++|++++.|+.|++||+.+++
T Consensus       356 ~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          356 GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             ceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            99999999998          799999999999999998764

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.26  E-value=6.1e-12  Score=97.78  Aligned_cols=91  Identities=14%  Similarity=0.095  Sum_probs=69.7

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhh---h-hhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV---A-AANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~---~-~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      +...+.+++|+|+++++++++.|+.+++||+..........   . .....-.....+ +|...|.+++|+|++++|+++
T Consensus       145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~  223 (377)
T 3dwl_C          145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYA  223 (377)
T ss_dssp             CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEE
T ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEE
Confidence            77789999999999999999999999999997543111000   0 000011234455 999999999999999999999


Q ss_pred             cCCCcEEEEeecCCCC
Q psy14043        179 DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~  194 (205)
                      +.|++|++||+.++..
T Consensus       224 ~~d~~i~iwd~~~~~~  239 (377)
T 3dwl_C          224 GHDSSVTIAYPSAPEQ  239 (377)
T ss_dssp             ETTTEEC-CEECSTTS
T ss_pred             eCCCcEEEEECCCCCC
Confidence            9999999999998765

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.26  E-value=9.4e-12  Score=95.83  Aligned_cols=77  Identities=16%  Similarity=0.357  Sum_probs=69.4

Q ss_pred             CCccccccccccC----CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEe
Q psy14043        103 NNTKVNCLAWHQN----QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTS  177 (205)
Q Consensus       103 ~~~~~~~~~~~~~----~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las  177 (205)
                      +...+.+++|+++    +.++++|+.|+.+++|++.+..              ....+.+|...|.+++|+| ++++|++
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~~l~s  133 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--------------CIKHYVGHGNAINELKFHPRDPNLLLS  133 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--------------EEEEEESCCSCEEEEEECSSCTTEEEE
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--------------EeeeecCCCCcEEEEEECCCCCCEEEE
Confidence            4466889999999    6799999999999999998876              5677889999999999999 9999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.|++|++||+.+++
T Consensus       134 ~~~dg~i~iwd~~~~~  149 (366)
T 3k26_A          134 VSKDHALRLWNIQTDT  149 (366)
T ss_dssp             EETTSCEEEEETTTTE
T ss_pred             EeCCCeEEEEEeecCe
Confidence            9999999999998764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.26  E-value=1.5e-11  Score=95.01  Aligned_cols=80  Identities=18%  Similarity=0.378  Sum_probs=70.6

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++++++++.|+.+++|++.+..            ......+.+|...|.+++|+|++++|++++.|
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d   73 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------------WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD   73 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------------EEEEEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc------------EEeeeeecCCCCcccEEEEeCCCCEEEEEcCC
Confidence            366789999999999999999999999999998763            11346778999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+.++.
T Consensus        74 g~i~vwd~~~~~   85 (372)
T 1k8k_C           74 RNAYVWTLKGRT   85 (372)
T ss_dssp             SCEEEEEEETTE
T ss_pred             CeEEEEECCCCe
Confidence            999999997764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.26  E-value=5.1e-12  Score=107.52  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=73.3

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++++.|+.+++|++.++.              ...++.+|...|.+++|+|++++|++++.
T Consensus        10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~   75 (814)
T 3mkq_A           10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV--------------EVRSIQVTETPVRAGKFIARKNWIIVGSD   75 (814)
T ss_dssp             EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred             ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc--------------eEEEEecCCCcEEEEEEeCCCCEEEEEeC
Confidence            4567789999999999999999999999999998876              56788899999999999999999999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |++|++||+.+++.
T Consensus        76 dg~i~vw~~~~~~~   89 (814)
T 3mkq_A           76 DFRIRVFNYNTGEK   89 (814)
T ss_dssp             TSEEEEEETTTCCE
T ss_pred             CCeEEEEECCCCcE
Confidence            99999999987753

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.25  E-value=1.5e-11  Score=97.34  Aligned_cols=73  Identities=15%  Similarity=0.333  Sum_probs=62.2

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceece--ecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ--SLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      ...+.++|++. +.+|+| .|++|++||..++.              ...  .+.+|...|++++|+|+|++||+|+.|+
T Consensus       106 ~y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~--------------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg  169 (420)
T 4gga_A          106 YYLNLVDWSSG-NVLAVA-LDNSVYLWSASSGD--------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA  169 (420)
T ss_dssp             TTCBCEEECTT-SEEEEE-ETTEEEEEETTTCC--------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTS
T ss_pred             ccceeEEECCC-CEEEEE-eCCEEEEEECCCCC--------------EEEEEEecCCCCcEEEEEECCCCCEEEEEECCC
Confidence            45678999975 578877 59999999999886              333  4567889999999999999999999999


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      +|++||+.+++
T Consensus       170 ~v~iWd~~~~~  180 (420)
T 4gga_A          170 EVQLWDVQQQK  180 (420)
T ss_dssp             CEEEEETTTTE
T ss_pred             eEEEEEcCCCc
Confidence            99999998765

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.25  E-value=1.1e-11  Score=96.71  Aligned_cols=82  Identities=9%  Similarity=0.084  Sum_probs=67.3

Q ss_pred             CCCccccccccccCCCeeeeccccc----ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDG----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .+...+.+++|+|+++.+++++.|+    .+++|++......          ......+.+|...|++++|||||++||+
T Consensus       217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~~V~~~~~Spdg~~las  286 (365)
T 4h5i_A          217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS----------VLRSKQVTNRFKGITSMDVDMKGELAVL  286 (365)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE----------EEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred             CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec----------ceeeeeecCCCCCeEeEEECCCCCceEE
Confidence            3455678899999999999998887    5788888765411          1123567899999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.|++|+|||+.+++
T Consensus       287 gs~D~~V~iwd~~~~~  302 (365)
T 4h5i_A          287 ASNDNSIALVKLKDLS  302 (365)
T ss_dssp             EETTSCEEEEETTTTE
T ss_pred             EcCCCEEEEEECCCCc
Confidence            9999999999998865

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.24  E-value=1.1e-11  Score=105.22  Aligned_cols=83  Identities=19%  Similarity=0.334  Sum_probs=70.7

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC--CCEEE
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLT  176 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~--~~~la  176 (205)
                      +...|...+.+++|+|+++++++|+.||.+++|++.+...            ....++.+|.+.|.+++|+|+  +++|+
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------------~~~~~l~~h~~~V~~l~~s~~~~~~~l~   71 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------------KLIDTLTGHEGPVWRVDWAHPKFGTILA   71 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------------EEEEEECCCSSCEEEEEECCTTSCSEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------------ccceeccCCcCceEEEEecCCCCCCEEE
Confidence            3456788999999999999999999999999999984321            145678999999999999988  99999


Q ss_pred             eecCCCcEEEEeecCCC
Q psy14043        177 SSDETGLIIVWMLYKEK  193 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~  193 (205)
                      ||+.||+|++||+.++.
T Consensus        72 s~s~Dg~I~vwd~~~~~   88 (753)
T 3jro_A           72 SCSYDGKVLIWKEENGR   88 (753)
T ss_dssp             EEETTSCEEEEEEETTE
T ss_pred             EEeCCCeEEEEECCCCc
Confidence            99999999999998864

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.24  E-value=2e-11  Score=100.48  Aligned_cols=79  Identities=16%  Similarity=0.308  Sum_probs=71.7

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccc-ceeeEEEEEEcC---------
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNE---------  170 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~g-h~~~v~~~~~s~---------  170 (205)
                      ..+...+.+++|+|+++++++++.|+.+++|++.++.              ....+.+ |...|++++|+|         
T Consensus       485 ~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------------~~~~~~~~h~~~v~~~~~sp~~~~~~~~~  550 (615)
T 1pgu_A          485 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------------VKTSRWAFRTSKINAISWKPAEKGANEEE  550 (615)
T ss_dssp             SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEECCSCCCSSCEEEEEECCCC------C
T ss_pred             CCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------------ceeEeecCCCCceeEEEEcCccccccccc
Confidence            4566788999999999999999999999999999876              5567777 999999999999         


Q ss_pred             -CCCEEEeecCCCcEEEEeecCCC
Q psy14043        171 -QYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       171 -~~~~las~~~d~~i~~wd~~~~~  193 (205)
                       ++++|++++.|++|++||+.++.
T Consensus       551 ~~~~~l~~~~~dg~i~iw~~~~~~  574 (615)
T 1pgu_A          551 IEEDLVATGSLDTNIFIYSVKRPM  574 (615)
T ss_dssp             CSCCEEEEEETTSCEEEEESSCTT
T ss_pred             cCCCEEEEEcCCCcEEEEECCCCc
Confidence             99999999999999999998864

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.23  E-value=2e-11  Score=97.52  Aligned_cols=77  Identities=17%  Similarity=0.174  Sum_probs=68.2

Q ss_pred             CCCccccccccccC---CCeeeecccccceEEEEecCCCCcchhhhhhcccceecee-cccceeeEEEEEEcCCCCEEEe
Q psy14043        102 PNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS-LQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       102 ~~~~~~~~~~~~~~---~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .+...+.++.|+|+   ++++++|+.|+.|++||+.++.              .... +.+|...|.+++|+ ++++|+|
T Consensus       193 ~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~--------------~~~~~~~~h~~~v~~~~~s-d~~~l~s  257 (450)
T 2vdu_B          193 GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF--------------IVDKWLFGHKHFVSSICCG-KDYLLLS  257 (450)
T ss_dssp             ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT--------------CEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred             cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc--------------eeeeeecCCCCceEEEEEC-CCCEEEE
Confidence            35567889999999   9999999999999999998775              3344 56999999999999 9999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.|++|++||+.+++
T Consensus       258 ~~~d~~v~vwd~~~~~  273 (450)
T 2vdu_B          258 AGGDDKIFAWDWKTGK  273 (450)
T ss_dssp             EESSSEEEEEETTTCC
T ss_pred             EeCCCeEEEEECCCCc
Confidence            9999999999998876

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.23  E-value=1.6e-11  Score=98.07  Aligned_cols=88  Identities=15%  Similarity=0.155  Sum_probs=68.1

Q ss_pred             CCccccccccccCCCeee----ecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC-CCEEEe
Q psy14043        103 NNTKVNCLAWHQNQGWIA----VGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLTS  177 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~la----sg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~-~~~las  177 (205)
                      ....+.+++|++++++++    +|+.|+.+++||+.+.......   ....+.....+.+|...|.+++|+|+ +..|+|
T Consensus        91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las  167 (434)
T 2oit_A           91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ---QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV  167 (434)
T ss_dssp             CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS---SCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred             CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC---CcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence            345688999999999999    8999999999999764100000   00111224567889999999999997 899999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      ++.||+|++||+.++.
T Consensus       168 ~s~Dg~v~iwD~~~~~  183 (434)
T 2oit_A          168 CLADGSIAVLQVTETV  183 (434)
T ss_dssp             EETTSCEEEEEESSSE
T ss_pred             EECCCeEEEEEcCCCc
Confidence            9999999999998763

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.22  E-value=2.4e-11  Score=92.92  Aligned_cols=82  Identities=11%  Similarity=0.046  Sum_probs=70.5

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~  179 (205)
                      ..|...+.+++|+|+++++++++.|+.+++|++.+.....           ....+.+|...|.+++|+|+++ +|++|+
T Consensus         8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~   76 (342)
T 1yfq_A            8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-----------DLLQSLRYKHPLLCCNFIDNTDLQIYVGT   76 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE-----------EEEEEEECSSCEEEEEEEESSSEEEEEEE
T ss_pred             cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc-----------cceeeeecCCceEEEEECCCCCcEEEEEc
Confidence            4677889999999999999999999999999998764111           2345568999999999999999 999999


Q ss_pred             CCCcEEEEee-cCCC
Q psy14043        180 ETGLIIVWML-YKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~-~~~~  193 (205)
                      .|+.|++||+ .++.
T Consensus        77 ~dg~i~~wd~~~~~~   91 (342)
T 1yfq_A           77 VQGEILKVDLIGSPS   91 (342)
T ss_dssp             TTSCEEEECSSSSSS
T ss_pred             CCCeEEEEEeccCCc
Confidence            9999999999 6654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.22  E-value=1.9e-11  Score=96.01  Aligned_cols=82  Identities=24%  Similarity=0.409  Sum_probs=70.6

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC-CCEEEeecC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLTSSDE  180 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~-~~~las~~~  180 (205)
                      .+...+.+++|+|+++++++++.|+.+++|++.+.....          .....+.+|...|.+++|+|+ +++|++++.
T Consensus        65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  134 (416)
T 2pm9_A           65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI----------NSMARFSNHSSSVKTVKFNAKQDNVLASGGN  134 (416)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC----------CEEEECCCSSSCCCEEEECSSSTTBEEEECS
T ss_pred             ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccc----------cchhhccCCccceEEEEEcCCCCCEEEEEcC
Confidence            456678999999999999999999999999998732100          145678899999999999998 899999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++||+.++.
T Consensus       135 dg~v~iwd~~~~~  147 (416)
T 2pm9_A          135 NGEIFIWDMNKCT  147 (416)
T ss_dssp             SSCEEBCBTTTTS
T ss_pred             CCeEEEEECCCCc
Confidence            9999999998876

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.21  E-value=1.8e-11  Score=99.96  Aligned_cols=77  Identities=8%  Similarity=0.112  Sum_probs=64.7

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEE--EEcCCC-CEEEee
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI--IWNEQY-EKLTSS  178 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~--~~s~~~-~~las~  178 (205)
                      .+...+.+++|+++ ..+++|+.|+++++||++++..             ....+.+|...|.++  +|+|+| ++||||
T Consensus       264 ~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~-------------~~~~~~~H~~~V~sv~~~~s~~g~~~laS~  329 (524)
T 2j04_B          264 LADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV-------------PSFYDQVHDSYILSVSTAYSDFEDTVVSTV  329 (524)
T ss_dssp             CTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS-------------CSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred             cCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC-------------ceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence            35567889999986 4799999999999999987531             234678999999999  578888 899999


Q ss_pred             cCCCcEEEEeecCC
Q psy14043        179 DETGLIIVWMLYKE  192 (205)
Q Consensus       179 ~~d~~i~~wd~~~~  192 (205)
                      |.|++|+|||+.++
T Consensus       330 S~D~tvklWD~~~~  343 (524)
T 2j04_B          330 AVDGYFYIFNPKDI  343 (524)
T ss_dssp             ETTSEEEEECGGGH
T ss_pred             ccCCeEEEEECCCC
Confidence            99999999999764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.21  E-value=4.3e-11  Score=93.42  Aligned_cols=94  Identities=17%  Similarity=0.253  Sum_probs=71.4

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhh---------------------------------hhc
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA---------------------------------AAN  147 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~---------------------------------~~~  147 (205)
                      ..+...+.+++|+|+++++++++.|+.+++|++.++........                                 ...
T Consensus       242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~  321 (408)
T 4a11_B          242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV  321 (408)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred             ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence            35666789999999999999999999999999987543110000                                 000


Q ss_pred             ccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        148 VNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       148 ~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                      ........+.+|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus       322 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~  368 (408)
T 4a11_B          322 YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP  368 (408)
T ss_dssp             TTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred             cCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence            11134456789999999999999999999999999999999988754

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.21  E-value=4.2e-11  Score=93.35  Aligned_cols=82  Identities=21%  Similarity=0.261  Sum_probs=68.6

Q ss_pred             CCCccccccccccCCC-eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~  179 (205)
                      .+...+.+++|+|+++ .+++++.|+.+++||+.+.....          .....+ +|...|.+++|+| ++++|++++
T Consensus       202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~----------~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~  270 (383)
T 3ei3_B          202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN----------SYIAEM-PHEKPVNAAYFNPTDSTKLLTTD  270 (383)
T ss_dssp             CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT----------CEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred             cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc----------ceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence            4566789999999998 89999999999999998743111          022333 7999999999999 999999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|++|++||+.++..
T Consensus       271 ~d~~i~iwd~~~~~~  285 (383)
T 3ei3_B          271 QRNEIRVYSSYDWSK  285 (383)
T ss_dssp             SSSEEEEEETTBTTS
T ss_pred             CCCcEEEEECCCCcc
Confidence            999999999988664

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.20  E-value=2.7e-11  Score=94.57  Aligned_cols=76  Identities=20%  Similarity=0.340  Sum_probs=69.0

Q ss_pred             CccccccccccCCCeeeecccc---cceEEEEecCCCCcchhhhhhcccceeceeccc-------------ceeeEEEEE
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-------------HSGKVRAII  167 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~g-------------h~~~v~~~~  167 (205)
                      ...+.++.|+|+++++++++.|   +.+++||+.+..              ....+.+             |...|.+++
T Consensus       233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  298 (397)
T 1sq9_A          233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--------------RIGSLSVPTHSSQASLGEFAHSSWVMSLS  298 (397)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--------------EEEEECBC--------CCBSBSSCEEEEE
T ss_pred             CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--------------ccceeccCcccccccccccccCCcEEEEE
Confidence            6678999999999999999999   999999998776              4456677             999999999


Q ss_pred             EcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        168 WNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       168 ~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      |+|++++|++++.|+.|++||+.+++
T Consensus       299 ~~~~~~~l~~~~~dg~i~iwd~~~~~  324 (397)
T 1sq9_A          299 FNDSGETLCSAGWDGKLRFWDVKTKE  324 (397)
T ss_dssp             ECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred             ECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence            99999999999999999999998764

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.20  E-value=4.3e-11  Score=90.25  Aligned_cols=79  Identities=13%  Similarity=0.139  Sum_probs=70.7

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ...|...+.+++| ++++.+++++.|+.+++|++.+..              ....+.+|...|.+++|+|++++|++++
T Consensus        14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~   78 (313)
T 3odt_A           14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW--------------LGTVVYTGQGFLNSVCYDSEKELLLFGG   78 (313)
T ss_dssp             ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE--------------EEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred             hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE--------------EEEEeecCCccEEEEEECCCCCEEEEec
Confidence            3467778999999 999999999999999999998765              5567789999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|+.|++||+....
T Consensus        79 ~dg~i~~~~~~~~~   92 (313)
T 3odt_A           79 KDTMINGVPLFATS   92 (313)
T ss_dssp             TTSCEEEEETTCCT
T ss_pred             CCCeEEEEEeeecC
Confidence            99999999987754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.20  E-value=1.5e-11  Score=94.47  Aligned_cols=77  Identities=12%  Similarity=0.001  Sum_probs=60.5

Q ss_pred             CCcccccccccc---CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccce---eeEEEEEEcCCCCEE-
Q psy14043        103 NNTKVNCLAWHQ---NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS---GKVRAIIWNEQYEKL-  175 (205)
Q Consensus       103 ~~~~~~~~~~~~---~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~---~~v~~~~~s~~~~~l-  175 (205)
                      +...++.++|++   ++..+++|+.|++|++||+.++.              ..+++.+|.   ..|.+++|||+|+++ 
T Consensus       177 ~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------------~l~tL~g~~~~v~~v~~vafSpdG~~lv  242 (356)
T 2w18_A          177 MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------------LLKKMHIDDSYQASVCHKAYSEMGLLFI  242 (356)
T ss_dssp             CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------------EEEEEECCC---CCCEEEEEEETTEEEE
T ss_pred             CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------------EEEEEcCCCcceeeeEEEEECCCCCEEE
Confidence            444566777777   66899999999999999999987              667887653   467788999999986 


Q ss_pred             -----------EeecCCCcEEEEeecCCC
Q psy14043        176 -----------TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       176 -----------as~~~d~~i~~wd~~~~~  193 (205)
                                 +||+.|++|++||+.+++
T Consensus       243 s~s~~~~~w~laSGs~D~tIklWd~~tgk  271 (356)
T 2w18_A          243 VLSHPCAKESESLRSPVFQLIVINPKTTL  271 (356)
T ss_dssp             EEC------------CCEEEEEEETTTTE
T ss_pred             EeccCCCcceeeccCCCcEEEEEECCCCE
Confidence                       678899999999998775

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.19  E-value=3.9e-11  Score=95.11  Aligned_cols=87  Identities=11%  Similarity=0.107  Sum_probs=69.2

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCC-CEEEeec
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~-~~las~~  179 (205)
                      ..+...+.+++|+|+++.+++| .|+.+++||+.+.........      .....+.+|...|.+++|+|++ ++|++|+
T Consensus       174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  246 (447)
T 3dw8_B          174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVD------IKPANMEELTEVITAAEFHPNSCNTFVYSS  246 (447)
T ss_dssp             SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEE------CCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred             cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeee------cccccccccCcceEEEEECCCCCcEEEEEe
Confidence            4677889999999999999999 799999999984321000000      0012577999999999999998 9999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|++|++||+.++..
T Consensus       247 ~dg~i~iwd~~~~~~  261 (447)
T 3dw8_B          247 SKGTIRLCDMRASAL  261 (447)
T ss_dssp             TTSCEEEEETTTCSS
T ss_pred             CCCeEEEEECcCCcc
Confidence            999999999988764

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.19  E-value=5.5e-11  Score=92.69  Aligned_cols=74  Identities=23%  Similarity=0.302  Sum_probs=66.2

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeecCCCc
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDETGL  183 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~~d~~  183 (205)
                      ..+.+++|+|+++.+++|+.|+.+++||+. +.              ...++.+|...|.+++|+|+++ .|++|+.|++
T Consensus       164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~--------------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~  228 (383)
T 3ei3_B          164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH--------------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT  228 (383)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--------------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred             CCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--------------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence            457889999999999999999999999994 33              4567889999999999999999 9999999999


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      |++||+.+..
T Consensus       229 i~iwd~~~~~  238 (383)
T 3ei3_B          229 VKLWDLRNIK  238 (383)
T ss_dssp             EEEEEGGGCC
T ss_pred             EEEEeCCCCC
Confidence            9999998744

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.19  E-value=8.4e-13  Score=101.87  Aligned_cols=88  Identities=17%  Similarity=0.135  Sum_probs=63.0

Q ss_pred             eEEEEecCCCC-----------------------CcchhHHHHHHH-HHHHHcCCCCCCCCCH-HHHHHHHHhC-CC--C
Q psy14043          5 VLKLIDLGSSA-----------------------GPSTDMWSLGVL-LYILLSGVSPFLDESE-EETRAHISVA-DY--S   56 (205)
Q Consensus         5 ~~kl~Dfg~~~-----------------------~~~~DvwslG~~-~~~ll~g~~pf~~~~~-~~~~~~i~~~-~~--~   56 (205)
                      .+||+|||+|.                       +.++||||+|++ .++++.|..||.+... ......+... ..  .
T Consensus       220 ~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  299 (336)
T 2vuw_A          220 QVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTK  299 (336)
T ss_dssp             EEEECCCTTCBEEETTEEECCCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred             eEEEeeccccEecCCCcEEEeecccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcc
Confidence            89999999992                       778999998777 7788999999954221 1223333321 11  1


Q ss_pred             CCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc-ccchhh
Q psy14043         57 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL-QVAWFA   97 (205)
Q Consensus        57 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l-~~~~~~   97 (205)
                      .+...+..+++++++||.+||+++     ++.+++ +||||+
T Consensus       300 ~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          300 CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            112223357899999999999987     999999 999984

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.19  E-value=4.3e-11  Score=92.09  Aligned_cols=80  Identities=14%  Similarity=0.250  Sum_probs=70.2

Q ss_pred             ccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEE--cCCCCEEEe
Q psy14043        100 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW--NEQYEKLTS  177 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~--s~~~~~las  177 (205)
                      ...+...+.++.|+|+++++++++.|+.+++|++.+..              . ..+.+|...|.+++|  ++++++|++
T Consensus        82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--------------~-~~~~~~~~~v~~~~~~~~~~~~~l~~  146 (368)
T 3mmy_A           82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ--------------A-IQIAQHDAPVKTIHWIKAPNYSCVMT  146 (368)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------E-EEEEECSSCEEEEEEEECSSCEEEEE
T ss_pred             eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC--------------c-eeeccccCceEEEEEEeCCCCCEEEE
Confidence            34567789999999999999999999999999998765              2 235689999999999  899999999


Q ss_pred             ecCCCcEEEEeecCCCC
Q psy14043        178 SDETGLIIVWMLYKEKN  194 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~  194 (205)
                      ++.|++|++||+.+++.
T Consensus       147 ~~~dg~i~vwd~~~~~~  163 (368)
T 3mmy_A          147 GSWDKTLKFWDTRSSNP  163 (368)
T ss_dssp             EETTSEEEEECSSCSSC
T ss_pred             ccCCCcEEEEECCCCcE
Confidence            99999999999988753

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.18  E-value=2.7e-11  Score=104.83  Aligned_cols=78  Identities=12%  Similarity=0.141  Sum_probs=64.5

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc-cceeeEEEEEEc-----CCC---
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWN-----EQY---  172 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~s-----~~~---  172 (205)
                      .+...+.+++|+|+| ++|+|+.|++|++||+++.....        . ...+.+. ||++.|++++||     |||   
T Consensus       573 ~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~--------~-~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~  642 (902)
T 2oaj_A          573 ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIY--------M-ENIREISGAQSACVTCIEFVIMEYGDDGYSS  642 (902)
T ss_dssp             CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEE--------E-EEGGGTCSSCCCCEEEEEEEEEECTTSSSEE
T ss_pred             cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEE--------E-eehhHhccccccceEEEEEEEEecCCCCCcc
Confidence            467789999999999 99999999999999987653100        0 0113454 999999999999     885   


Q ss_pred             CEEEeecCCCcEEEEee
Q psy14043        173 EKLTSSDETGLIIVWML  189 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~  189 (205)
                      ++|+||+.|++|++||+
T Consensus       643 ~~l~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          643 ILMVCGTDMGEVITYKI  659 (902)
T ss_dssp             EEEEEEETTSEEEEEEE
T ss_pred             eEEEEEecCCcEEEEEE
Confidence            89999999999999999

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.18  E-value=4.1e-11  Score=93.59  Aligned_cols=92  Identities=17%  Similarity=0.230  Sum_probs=69.7

Q ss_pred             cCCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEee
Q psy14043        101 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~  178 (205)
                      ..|...+.+++|+| +++++++|+.|+.+++|++.+......... ............+|...|.+++|+| ++++|+++
T Consensus        40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~  118 (408)
T 4a11_B           40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTC-KAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS  118 (408)
T ss_dssp             CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEE-CEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred             eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEec-cccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence            35778899999999 999999999999999999987653211100 0000000112247999999999999 78899999


Q ss_pred             cCCCcEEEEeecCCC
Q psy14043        179 DETGLIIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~  193 (205)
                      +.|++|++||+.++.
T Consensus       119 ~~d~~i~iwd~~~~~  133 (408)
T 4a11_B          119 SFDKTLKVWDTNTLQ  133 (408)
T ss_dssp             ETTSEEEEEETTTTE
T ss_pred             eCCCeEEEeeCCCCc
Confidence            999999999998764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.18  E-value=3.6e-11  Score=102.33  Aligned_cols=77  Identities=21%  Similarity=0.354  Sum_probs=71.4

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.|+|+++++++|+.|+.+++|++.++.              ...++.+|.+.|.+++|+|++++|++++.|
T Consensus        53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  118 (814)
T 3mkq_A           53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDD  118 (814)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEecCCCCEEEEEEeCCCCEEEEEcCC
Confidence            466789999999999999999999999999999876              567888999999999999999999999999


Q ss_pred             CcEEEEeecCC
Q psy14043        182 GLIIVWMLYKE  192 (205)
Q Consensus       182 ~~i~~wd~~~~  192 (205)
                      ++|++||+.++
T Consensus       119 g~i~vw~~~~~  129 (814)
T 3mkq_A          119 LTVKLWNWENN  129 (814)
T ss_dssp             SEEEEEEGGGT
T ss_pred             CEEEEEECCCC
Confidence            99999999876

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.18  E-value=5.8e-11  Score=93.46  Aligned_cols=79  Identities=15%  Similarity=0.248  Sum_probs=67.7

Q ss_pred             CccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeecCCC
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDETG  182 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~~d~  182 (205)
                      ...+.++.|+|+++++++|+.|+.+++||+.+...             ......+|...|.+++|+|+++ +|++|+.||
T Consensus       247 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg  313 (420)
T 3vl1_A          247 TSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ-------------TIQLPSKFTCSCNSLTVDGNNANYIYAGYENG  313 (420)
T ss_dssp             CCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE-------------EEEECCTTSSCEEEEEECSSCTTEEEEEETTS
T ss_pred             cCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce-------------eEEcccccCCCceeEEEeCCCCCEEEEEeCCC
Confidence            35677889999999999999999999999987751             2233457999999999999998 999999999


Q ss_pred             cEEEEeecCCCCC
Q psy14043        183 LIIVWMLYKEKNP  195 (205)
Q Consensus       183 ~i~~wd~~~~~~~  195 (205)
                      .|++||+.++..+
T Consensus       314 ~i~vwd~~~~~~~  326 (420)
T 3vl1_A          314 MLAQWDLRSPECP  326 (420)
T ss_dssp             EEEEEETTCTTSC
T ss_pred             eEEEEEcCCCcCc
Confidence            9999999887653

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.18  E-value=5.3e-11  Score=90.58  Aligned_cols=78  Identities=18%  Similarity=0.209  Sum_probs=70.1

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.|+|+++.+++++.|+.+++|++.+..              ....+.+|...|.+++|+|++++|++++.|
T Consensus       139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  204 (337)
T 1gxr_A          139 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--------------LVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--------------eeeeeecccCceEEEEECCCCCEEEEEecC
Confidence            345567889999999999999999999999998775              556788999999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      +.|++||+.+++
T Consensus       205 g~i~~~d~~~~~  216 (337)
T 1gxr_A          205 NTVRSWDLREGR  216 (337)
T ss_dssp             SEEEEEETTTTE
T ss_pred             CcEEEEECCCCc
Confidence            999999998764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.17  E-value=7.8e-11  Score=91.04  Aligned_cols=93  Identities=13%  Similarity=0.105  Sum_probs=71.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh----hhhcccceeceecccceeeEEEEEEcCCCCEEE
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV----AAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT  176 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~----~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~la  176 (205)
                      ..+...+.++.|+|+++++++++.|+.+++||+..........    ......-.....+.+|...|.+++|+|++++|+
T Consensus       139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  218 (372)
T 1k8k_C          139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA  218 (372)
T ss_dssp             TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE
T ss_pred             cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE
Confidence            4556788999999999999999999999999975322110000    000001124567779999999999999999999


Q ss_pred             eecCCCcEEEEeecCCC
Q psy14043        177 SSDETGLIIVWMLYKEK  193 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~  193 (205)
                      +++.|+.|++||+.+++
T Consensus       219 ~~~~d~~i~i~d~~~~~  235 (372)
T 1k8k_C          219 WVSHDSTVCLADADKKM  235 (372)
T ss_dssp             EEETTTEEEEEEGGGTT
T ss_pred             EEeCCCEEEEEECCCCc
Confidence            99999999999998765

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.17  E-value=5.4e-11  Score=90.98  Aligned_cols=84  Identities=19%  Similarity=0.209  Sum_probs=67.1

Q ss_pred             CCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccce---------eeEEEEEEcCC
Q psy14043        102 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS---------GKVRAIIWNEQ  171 (205)
Q Consensus       102 ~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~---------~~v~~~~~s~~  171 (205)
                      .+...+.++.|+| +++.+++++.|+.+++|+++........        .....+.+|.         ..|.+++|+|+
T Consensus       191 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  262 (342)
T 1yfq_A          191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS--------SKRFAFRCHRLNLKDTNLAYPVNSIEFSPR  262 (342)
T ss_dssp             SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC--------TTCEEEECCCCCTTCCSSCCCEEEEEECTT
T ss_pred             CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccc--------ccceeeecccccccccccceeEEEEEEcCC
Confidence            4556788999999 9999999999999999999876100000        0334555664         49999999999


Q ss_pred             CCEEEeecCCCcEEEEeecCCC
Q psy14043        172 YEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       172 ~~~las~~~d~~i~~wd~~~~~  193 (205)
                      +++|++++.||.|++||+.+++
T Consensus       263 ~~~l~~~~~dg~i~vwd~~~~~  284 (342)
T 1yfq_A          263 HKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             TCCEEEEETTSCEEEEETTTTE
T ss_pred             CCEEEEecCCceEEEEcCccHh
Confidence            9999999999999999998765

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.17  E-value=6.3e-11  Score=89.34  Aligned_cols=78  Identities=13%  Similarity=0.198  Sum_probs=68.6

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.|+|++ .+++++.|+.+++||+.++.              ....+.+|...|.+++|+|+++ +++++.|
T Consensus       223 ~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d  286 (313)
T 3odt_A          223 GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS--------------LKQVITLPAISIWSVDCMSNGD-IIVGSSD  286 (313)
T ss_dssp             CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC--------------EEEEEECSSSCEEEEEECTTSC-EEEEETT
T ss_pred             cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc--------------eeEEEeccCceEEEEEEccCCC-EEEEeCC
Confidence            456678999999999 58899999999999998876              6678889999999999999998 6679999


Q ss_pred             CcEEEEeecCCCCC
Q psy14043        182 GLIIVWMLYKEKNP  195 (205)
Q Consensus       182 ~~i~~wd~~~~~~~  195 (205)
                      +.|++||+.+++..
T Consensus       287 g~i~iw~~~~~~~~  300 (313)
T 3odt_A          287 NLVRIFSQEKSRWA  300 (313)
T ss_dssp             SCEEEEESCGGGCC
T ss_pred             CcEEEEeCCCCcee
Confidence            99999999887653

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.17  E-value=1.3e-10  Score=89.85  Aligned_cols=82  Identities=26%  Similarity=0.518  Sum_probs=70.2

Q ss_pred             CCCcccccccccc-------------CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEE
Q psy14043        102 PNNTKVNCLAWHQ-------------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW  168 (205)
Q Consensus       102 ~~~~~~~~~~~~~-------------~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~  168 (205)
                      .+...+.++.|+|             ++..+++++.|+.+++||+.+....          ......+.+|...|.+++|
T Consensus       145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~~h~~~v~~~~~  214 (379)
T 3jrp_A          145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWVRDVAW  214 (379)
T ss_dssp             CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCEEEEEE
T ss_pred             CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc----------eeeEEEEecccCcEeEEEE
Confidence            4566788999999             6899999999999999999876421          1244678899999999999


Q ss_pred             cCC---CCEEEeecCCCcEEEEeecCCC
Q psy14043        169 NEQ---YEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       169 s~~---~~~las~~~d~~i~~wd~~~~~  193 (205)
                      +|+   +++|++++.|++|++||+.++.
T Consensus       215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~  242 (379)
T 3jrp_A          215 SPTVLLRSYLASVSQDRTCIIWTQDNEQ  242 (379)
T ss_dssp             CCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred             CCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence            999   8999999999999999998864

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.16  E-value=8.4e-11  Score=93.21  Aligned_cols=79  Identities=9%  Similarity=0.176  Sum_probs=64.7

Q ss_pred             CCCccccccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee------------eEEEEEE
Q psy14043        102 PNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG------------KVRAIIW  168 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~------------~v~~~~~  168 (205)
                      .+...+.+++|+|++ ..+++|+.|+.+++||+.+......          ....+.+|..            .|.+++|
T Consensus       224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  293 (447)
T 3dw8_B          224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR----------HSKLFEEPEDPSNRSFFSEIISSISDVKF  293 (447)
T ss_dssp             GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT----------TCEEECCC-----CCHHHHHTTCEEEEEE
T ss_pred             ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc----------eeeEeccCCCccccccccccCceEEEEEE
Confidence            456678999999998 9999999999999999987752100          1245556654            9999999


Q ss_pred             cCCCCEEEeecCCCcEEEEeecC
Q psy14043        169 NEQYEKLTSSDETGLIIVWMLYK  191 (205)
Q Consensus       169 s~~~~~las~~~d~~i~~wd~~~  191 (205)
                      +|+|++|++++. ++|++||+.+
T Consensus       294 s~~g~~l~~~~~-~~v~iwd~~~  315 (447)
T 3dw8_B          294 SHSGRYMMTRDY-LSVKVWDLNM  315 (447)
T ss_dssp             CTTSSEEEEEES-SEEEEEETTC
T ss_pred             CCCCCEEEEeeC-CeEEEEeCCC
Confidence            999999999999 9999999987

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.16  E-value=8.3e-11  Score=92.21  Aligned_cols=76  Identities=25%  Similarity=0.537  Sum_probs=67.1

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+.+++|+|+++++++++.|+.+++|+ .++.              ....+.+|...|.+++|+|++++|++++.|+
T Consensus       107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  171 (425)
T 1r5m_A          107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGA--------------LLNVLNFHRAPIVSVKWNKDGTHIISMDVEN  171 (425)
T ss_dssp             -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSC--------------EEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred             CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCC--------------eeeeccCCCccEEEEEECCCCCEEEEEecCC
Confidence            355789999999999999999999999999 3333              4567889999999999999999999999999


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      .|++||+.++.
T Consensus       172 ~i~iwd~~~~~  182 (425)
T 1r5m_A          172 VTILWNVISGT  182 (425)
T ss_dssp             CEEEEETTTTE
T ss_pred             eEEEEECCCCc
Confidence            99999998765

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.15  E-value=2.6e-11  Score=96.15  Aligned_cols=77  Identities=9%  Similarity=0.240  Sum_probs=66.8

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc-cceeeEEEEEEc----CCCCEEEe
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWN----EQYEKLTS  177 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~s----~~~~~las  177 (205)
                      +...+.+++|+|++.++++|+.|+.+++||+.++.              ...++. +|...|.+++|+    +++++|++
T Consensus       213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s  278 (437)
T 3gre_A          213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV--------------LIRSWSFGDHAPITHVEVCQFYGKNSVIVVG  278 (437)
T ss_dssp             GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE--------------EEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc--------------EEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence            56788999999999999999999999999998765              445554 788899999665    56889999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.|++|++||+.+++
T Consensus       279 ~~~dg~i~iwd~~~~~  294 (437)
T 3gre_A          279 GSSKTFLTIWNFVKGH  294 (437)
T ss_dssp             ESTTEEEEEEETTTTE
T ss_pred             EcCCCcEEEEEcCCCc
Confidence            9999999999998765

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.15  E-value=7.8e-11  Score=92.70  Aligned_cols=81  Identities=15%  Similarity=0.242  Sum_probs=66.5

Q ss_pred             CCccccccccccCCCeeee--cccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        103 NNTKVNCLAWHQNQGWIAV--GGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~las--g~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      +...+.++.|+|+++.+++  |+.|+.+++|++.+...            .....+.+|...|.+++|+|+|++|++++.
T Consensus       302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~------------~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~  369 (401)
T 4aez_A          302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL------------TKQVDIPAHDTRVLYSALSPDGRILSTAAS  369 (401)
T ss_dssp             CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE------------EEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred             CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc------------eeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence            3456889999999999998  66999999999987541            122356799999999999999999999999


Q ss_pred             CCcEEEEeecCCCCC
Q psy14043        181 TGLIIVWMLYKEKNP  195 (205)
Q Consensus       181 d~~i~~wd~~~~~~~  195 (205)
                      ||+|++||+.+++..
T Consensus       370 dg~i~iw~~~~~~~~  384 (401)
T 4aez_A          370 DENLKFWRVYDGDHV  384 (401)
T ss_dssp             TSEEEEEECCC----
T ss_pred             CCcEEEEECCCCccc
Confidence            999999999887654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.14  E-value=4.3e-11  Score=106.38  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=71.8

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++++++++.|+.+++|++.++.              ...++.+|.+.|++++|||+|++|++|+.|
T Consensus      1083 ~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~--------------~~~~l~~h~~~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A         1083 CHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS--------------PLHELKGHNGCVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp             CCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS--------------CSBCCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred             ccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc--------------eeeeeccCCCcEEEEEECCCCCEEEEEeCC
Confidence            355678899999999999999999999999998876              556788999999999999999999999999


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      |+|++||+.+++.
T Consensus      1149 g~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A         1149 GEIRIWNVSDGQL 1161 (1249)
T ss_dssp             SCCCEEESSSSCC
T ss_pred             CEEEEEECCCCce
Confidence            9999999988764

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.14  E-value=4.5e-11  Score=91.80  Aligned_cols=83  Identities=20%  Similarity=0.369  Sum_probs=69.9

Q ss_pred             CCCccccccccccC---CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEE------EcCCC
Q psy14043        102 PNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII------WNEQY  172 (205)
Q Consensus       102 ~~~~~~~~~~~~~~---~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~------~s~~~  172 (205)
                      .+...+.+++|+|+   +..+++|+.|+.+++|++.+...             ....+.+|...|.+++      |+|++
T Consensus        63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~s~~~  129 (357)
T 3i2n_A           63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM-------------PVYSVKGHKEIINAIDGIGGLGIGEGA  129 (357)
T ss_dssp             EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS-------------CSEEECCCSSCEEEEEEESGGGCC-CC
T ss_pred             cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc-------------cEEEEEecccceEEEeeccccccCCCc
Confidence            56678899999999   69999999999999999987641             3467789999999995      57899


Q ss_pred             CEEEeecCCCcEEEEeecCCCCCCC
Q psy14043        173 EKLTSSDETGLIIVWMLYKEKNPQD  197 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~~~~~~~~~  197 (205)
                      ++|++++.|++|++||+.++..+..
T Consensus       130 ~~l~~~~~d~~i~vwd~~~~~~~~~  154 (357)
T 3i2n_A          130 PEIVTGSRDGTVKVWDPRQKDDPVA  154 (357)
T ss_dssp             CEEEEEETTSCEEEECTTSCSSCSE
T ss_pred             cEEEEEeCCCeEEEEeCCCCCCcce
Confidence            9999999999999999988764433

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.14  E-value=1.3e-10  Score=88.36  Aligned_cols=80  Identities=14%  Similarity=0.171  Sum_probs=67.3

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceecee--cccceeeEEEEEEcCCCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS--LQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      .+...+.+++|+|+++++++++ |+.+++|++.+.....           ....  ..+|...|.+++|+|++++|++++
T Consensus        49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  116 (337)
T 1gxr_A           49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS-----------PVSQLDCLNRDNYIRSCKLLPDGCTLIVGG  116 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS-----------CSEEEECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred             cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee-----------eeecccccCCCCcEEEEEEcCCCCEEEEEc
Confidence            5777899999999999999998 9999999998764211           1122  237999999999999999999999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|+.|++||+.+++
T Consensus       117 ~d~~i~~~d~~~~~  130 (337)
T 1gxr_A          117 EASTLSIWDLAAPT  130 (337)
T ss_dssp             SSSEEEEEECCCC-
T ss_pred             CCCcEEEEECCCCC
Confidence            99999999998765

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.12  E-value=1.2e-10  Score=92.25  Aligned_cols=68  Identities=15%  Similarity=0.203  Sum_probs=61.5

Q ss_pred             cccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccc--ceeeEEEEEEcCCCCEEEeecCCCcEEEEee
Q psy14043        112 WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG--HSGKVRAIIWNEQYEKLTSSDETGLIIVWML  189 (205)
Q Consensus       112 ~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~g--h~~~v~~~~~s~~~~~las~~~d~~i~~wd~  189 (205)
                      +++++..+++|+.|+.+++||+.+..              ...++.+  |.+.|.+++|+|++++|++|+.||+|++||+
T Consensus       178 ~~~~~~~l~~~~~d~~i~iwd~~~~~--------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  243 (437)
T 3gre_A          178 VNEEKSLLVALTNLSRVIIFDIRTLE--------------RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDI  243 (437)
T ss_dssp             ECSSCEEEEEEETTSEEEEEETTTCC--------------EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred             EcCCCCEEEEEeCCCeEEEEeCCCCe--------------eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEc
Confidence            55789999999999999999998876              5567777  8999999999999999999999999999999


Q ss_pred             cCCC
Q psy14043        190 YKEK  193 (205)
Q Consensus       190 ~~~~  193 (205)
                      .+++
T Consensus       244 ~~~~  247 (437)
T 3gre_A          244 RFNV  247 (437)
T ss_dssp             TTTE
T ss_pred             CCcc
Confidence            8754

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.11  E-value=1.4e-10  Score=89.30  Aligned_cols=77  Identities=18%  Similarity=0.213  Sum_probs=68.3

Q ss_pred             CCccccccccccCCCeeeeccccc--------------ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEE
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDG--------------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW  168 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~--------------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~  168 (205)
                      +...+..+.|+|+++++++++.++              .+++|+..+..              ....+.+|...|.+++|
T Consensus       258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~v~~~~~  323 (369)
T 3zwl_B          258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--------------EIGRVQGHFGPLNTVAI  323 (369)
T ss_dssp             CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--------------EEEEEECCSSCEEEEEE
T ss_pred             CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--------------chhheecccCcEEEEEE
Confidence            445677889999999999999888              79999988876              56778899999999999


Q ss_pred             cCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        169 NEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       169 s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      +|++++|++++.||+|++||+.++.
T Consensus       324 s~~~~~l~s~~~dg~v~iw~~~~~~  348 (369)
T 3zwl_B          324 SPQGTSYASGGEDGFIRLHHFEKSY  348 (369)
T ss_dssp             CTTSSEEEEEETTSEEEEEEECHHH
T ss_pred             CCCCCEEEEEcCCCeEEEEECcccc
Confidence            9999999999999999999998754

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.11  E-value=1.3e-10  Score=92.79  Aligned_cols=82  Identities=10%  Similarity=0.097  Sum_probs=68.9

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC---CCEEEeec
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ---YEKLTSSD  179 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~---~~~las~~  179 (205)
                      +...+.+++|+|+++++++|+.++.+.+|++.+.....          .....+.+|...|.+++|+|+   +++|++|+
T Consensus       148 ~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~----------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~  217 (450)
T 2vdu_B          148 FSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK----------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSD  217 (450)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS----------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEE
T ss_pred             CCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc----------ccceeeecccCceEEEEEcCCCCCCcEEEEEc
Confidence            34567899999999999999999999999998765110          012367899999999999999   99999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|++|++||+.++..
T Consensus       218 ~d~~i~vwd~~~~~~  232 (450)
T 2vdu_B          218 RDEHIKISHYPQCFI  232 (450)
T ss_dssp             TTSCEEEEEESCTTC
T ss_pred             CCCcEEEEECCCCce
Confidence            999999999987754

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.09  E-value=2.6e-10  Score=90.63  Aligned_cols=83  Identities=19%  Similarity=0.323  Sum_probs=68.9

Q ss_pred             CCCcccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeec
Q psy14043        102 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~  179 (205)
                      .+...+.+++|+| ++..+++++.|+.|++||+.+....           .....+.+|...|++++|+|+++ .|++|+
T Consensus       229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~-----------~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~  297 (430)
T 2xyi_A          229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS-----------KPSHTVDAHTAEVNCLSFNPYSEFILATGS  297 (430)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-----------SCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred             CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-----------cceeEeecCCCCeEEEEeCCCCCCEEEEEe
Confidence            5666789999999 6789999999999999999876311           13456678999999999999987 699999


Q ss_pred             CCCcEEEEeecCCCCC
Q psy14043        180 ETGLIIVWMLYKEKNP  195 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~~  195 (205)
                      .||+|++||+.+...+
T Consensus       298 ~dg~v~vwd~~~~~~~  313 (430)
T 2xyi_A          298 ADKTVALWDLRNLKLK  313 (430)
T ss_dssp             TTSEEEEEETTCTTSC
T ss_pred             CCCeEEEEeCCCCCCC
Confidence            9999999999875443

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.08  E-value=2.2e-10  Score=91.06  Aligned_cols=78  Identities=26%  Similarity=0.414  Sum_probs=67.4

Q ss_pred             CCCccccccccccCCC-eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeec
Q psy14043        102 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~  179 (205)
                      .+...+++++|+|++. .+++|+.|+.|++||+.+...             ...++.+|...|.+++|+|+++ .|++++
T Consensus       275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-------------~~~~~~~h~~~v~~i~~sp~~~~~l~s~~  341 (430)
T 2xyi_A          275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-------------KLHSFESHKDEIFQVQWSPHNETILASSG  341 (430)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-------------CSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred             cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-------------CeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence            4566789999999987 689999999999999987431             3467789999999999999985 699999


Q ss_pred             CCCcEEEEeecCC
Q psy14043        180 ETGLIIVWMLYKE  192 (205)
Q Consensus       180 ~d~~i~~wd~~~~  192 (205)
                      .|++|++||+...
T Consensus       342 ~d~~i~iwd~~~~  354 (430)
T 2xyi_A          342 TDRRLHVWDLSKI  354 (430)
T ss_dssp             TTSCCEEEEGGGT
T ss_pred             CCCcEEEEeCCCC
Confidence            9999999999873

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.08  E-value=2.7e-10  Score=91.00  Aligned_cols=78  Identities=19%  Similarity=0.358  Sum_probs=69.4

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEc--CCCCEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN--EQYEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s--~~~~~las~~  179 (205)
                      .|...+.++.|++++ .+++|+.|+.+++||+.++.              ....+.+|...|.+++|+  +++.+|++|+
T Consensus       160 ~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s  224 (464)
T 3v7d_B          160 GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC--------------CTHVFEGHNSTVRCLDIVEYKNIKYIVTGS  224 (464)
T ss_dssp             CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEEEESSSCEEEEEEE
T ss_pred             CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc--------------EEEEECCCCCccEEEEEecCCCCCEEEEEc
Confidence            567788999999887 89999999999999998876              557888999999999998  5789999999


Q ss_pred             CCCcEEEEeecCCCC
Q psy14043        180 ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ~d~~i~~wd~~~~~~  194 (205)
                      .|++|++||+.++..
T Consensus       225 ~d~~i~vwd~~~~~~  239 (464)
T 3v7d_B          225 RDNTLHVWKLPKESS  239 (464)
T ss_dssp             TTSCEEEEECCCCCC
T ss_pred             CCCcEEEeeCCCCcc
Confidence            999999999987653

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.07  E-value=3e-10  Score=90.71  Aligned_cols=76  Identities=17%  Similarity=0.271  Sum_probs=68.7

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.|+++++.+++|+.|+.+++||+.++.              ...++.+|...|.+++|+  +.+|++++.|
T Consensus       308 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~--~~~l~s~s~d  371 (464)
T 3v7d_B          308 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE--------------LMYTLQGHTALVGLLRLS--DKFLVSAAAD  371 (464)
T ss_dssp             CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred             CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--------------EEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence            466678899999999999999999999999998876              667889999999999998  5799999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      |+|++||+.++.
T Consensus       372 g~v~vwd~~~~~  383 (464)
T 3v7d_B          372 GSIRGWDANDYS  383 (464)
T ss_dssp             SEEEEEETTTCC
T ss_pred             CcEEEEECCCCc
Confidence            999999998754

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.05  E-value=1.6e-10  Score=90.90  Aligned_cols=75  Identities=21%  Similarity=0.477  Sum_probs=67.2

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+.+++|+|+++++++|+.|+.+++|++.++.              ...++.+|...|.+++|+  ++.|++|+.|+
T Consensus       133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg  196 (401)
T 4aez_A          133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--------------KLRTMAGHQARVGCLSWN--RHVLSSGSRSG  196 (401)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEEE--TTEEEEEETTS
T ss_pred             CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--------------EEEEecCCCCceEEEEEC--CCEEEEEcCCC
Confidence            56678999999999999999999999999998876              567888999999999994  67999999999


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      +|++||+....
T Consensus       197 ~i~i~d~~~~~  207 (401)
T 4aez_A          197 AIHHHDVRIAN  207 (401)
T ss_dssp             EEEEEETTSSS
T ss_pred             CEEEEecccCc
Confidence            99999998544

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.04  E-value=5e-10  Score=86.87  Aligned_cols=73  Identities=14%  Similarity=0.180  Sum_probs=50.5

Q ss_pred             cccccceEEEEecCCCCcchhhh-hhccccee-ceecccceeeEEEEEEcCCCCEEEeecCCCc-EEEEeecCCCC
Q psy14043        122 GGDDGLLKVLKLDTGKESTGQVA-AANVNLAM-NQSLQGHSGKVRAIIWNEQYEKLTSSDETGL-IIVWMLYKEKN  194 (205)
Q Consensus       122 g~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~-~~~~~gh~~~v~~~~~s~~~~~las~~~d~~-i~~wd~~~~~~  194 (205)
                      |+.++.+++||+.++........ .....+.. ...+.+|.+.|++++|||+|++||||+.|++ |++||+.+++.
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~  230 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL  230 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence            67889999999886531100000 00000111 4678999999999999999999999999999 99999987653

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.04  E-value=4e-10  Score=88.31  Aligned_cols=77  Identities=19%  Similarity=0.409  Sum_probs=69.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.|+|+++++++++.|+.+++|++.+..              ....+.+|...|.+++|+|++ .+++++.|
T Consensus       245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d  309 (425)
T 1r5m_A          245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN--------------SQNCFYGHSQSIVSASWVGDD-KVISCSMD  309 (425)
T ss_dssp             CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS--------------CSEEECCCSSCEEEEEEETTT-EEEEEETT
T ss_pred             cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc--------------cceEecCCCccEEEEEECCCC-EEEEEeCC
Confidence            456678899999999999999999999999998775              456778899999999999999 99999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      +.|++||+.+++
T Consensus       310 ~~i~i~d~~~~~  321 (425)
T 1r5m_A          310 GSVRLWSLKQNT  321 (425)
T ss_dssp             SEEEEEETTTTE
T ss_pred             CcEEEEECCCCc
Confidence            999999997764

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.02  E-value=7.1e-10  Score=94.26  Aligned_cols=82  Identities=26%  Similarity=0.518  Sum_probs=70.2

Q ss_pred             CCCcccccccccc-------------CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEE
Q psy14043        102 PNNTKVNCLAWHQ-------------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW  168 (205)
Q Consensus       102 ~~~~~~~~~~~~~-------------~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~  168 (205)
                      .+...+.++.|+|             ++..+++|+.|+.+++||+.+....          .....++.+|...|.+++|
T Consensus       143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~----------~~~~~~~~~h~~~V~~l~~  212 (753)
T 3jro_A          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWVRDVAW  212 (753)
T ss_dssp             CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCEEEEEE
T ss_pred             cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc----------ceeeeeecCCCCcEEEEEe
Confidence            4556788999999             5899999999999999999876421          1245678899999999999


Q ss_pred             cCC---CCEEEeecCCCcEEEEeecCCC
Q psy14043        169 NEQ---YEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       169 s~~---~~~las~~~d~~i~~wd~~~~~  193 (205)
                      +|+   +++|+||+.||+|++||+.++.
T Consensus       213 sp~~~~~~~l~s~s~Dg~I~iwd~~~~~  240 (753)
T 3jro_A          213 SPTVLLRSYLASVSQDRTCIIWTQDNEQ  240 (753)
T ss_dssp             CCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred             ccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence            999   9999999999999999998864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.01  E-value=8.5e-10  Score=87.65  Aligned_cols=71  Identities=21%  Similarity=0.397  Sum_probs=61.1

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ..+.++++  +++.+++|+.|+.+++||+.++.              ....+.+|.+.|.+++|  +++.|++|+.||+|
T Consensus       134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i  195 (435)
T 1p22_A          134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--------------CKRILTGHTGSVLCLQY--DERVIITGSSDSTV  195 (435)
T ss_dssp             CCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--------------EEEEECCCSSCEEEEEC--CSSEEEEEETTSCE
T ss_pred             CcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--------------EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeE
Confidence            34555544  78999999999999999998876              56788899999999999  78899999999999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      ++||+.+++
T Consensus       196 ~vwd~~~~~  204 (435)
T 1p22_A          196 RVWDVNTGE  204 (435)
T ss_dssp             EEEESSSCC
T ss_pred             EEEECCCCc
Confidence            999998765

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=98.89  E-value=4.5e-09  Score=83.45  Aligned_cols=75  Identities=23%  Similarity=0.423  Sum_probs=65.0

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.+  +++.+++|+.|+.+++||+.++.              ...++.+|...|.+++|++  ..|++|+.|
T Consensus       171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~l~~~~--~~l~s~s~d  232 (435)
T 1p22_A          171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--------------MLNTLIHHCEAVLHLRFNN--GMMVTCSKD  232 (435)
T ss_dssp             CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--------------EEEEECCCCSCEEEEECCT--TEEEEEETT
T ss_pred             CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--------------EEEEEcCCCCcEEEEEEcC--CEEEEeeCC
Confidence            45566777777  78899999999999999999886              6678889999999999974  599999999


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      ++|++||+.++..
T Consensus       233 g~i~vwd~~~~~~  245 (435)
T 1p22_A          233 RSIAVWDMASPTD  245 (435)
T ss_dssp             SCEEEEECSSSSC
T ss_pred             CcEEEEeCCCCCC
Confidence            9999999987653

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=98.88  E-value=3.4e-09  Score=84.34  Aligned_cols=67  Identities=27%  Similarity=0.313  Sum_probs=58.5

Q ss_pred             ccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeec
Q psy14043        111 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY  190 (205)
Q Consensus       111 ~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~  190 (205)
                      .+.++++++++|+.|+.+++|++.++.              ...++.+|.+.|.+++|+  +..|++|+.|++|++||+.
T Consensus       124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~  187 (445)
T 2ovr_B          124 CLQFCGNRIVSGSDDNTLKVWSAVTGK--------------CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE  187 (445)
T ss_dssp             EEEEETTEEEEEETTSCEEEEETTTCC--------------EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred             EEEEcCCEEEEEECCCcEEEEECCCCc--------------EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence            356678999999999999999998876              567888999999999998  5689999999999999988


Q ss_pred             CCC
Q psy14043        191 KEK  193 (205)
Q Consensus       191 ~~~  193 (205)
                      +++
T Consensus       188 ~~~  190 (445)
T 2ovr_B          188 TGE  190 (445)
T ss_dssp             TTE
T ss_pred             cCc
Confidence            764

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=98.82  E-value=1.1e-08  Score=81.43  Aligned_cols=74  Identities=23%  Similarity=0.419  Sum_probs=62.7

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec-----ccceeeEEEEEEcCCCCEEEe
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL-----QGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-----~gh~~~v~~~~~s~~~~~las  177 (205)
                      +...+.+++++  ++++++|+.|+.+++|++.++.              ....+     .+|.+.|++++|+|++..||+
T Consensus       361 ~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~--------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~  424 (445)
T 2ovr_B          361 HQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE--------------FIRNLVTLESGGSGGVVWRIRASNTKLVCAV  424 (445)
T ss_dssp             CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC--------------EEEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred             CCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc--------------eeeeeeccccCCCCceEEEEEecCCEEEEEE
Confidence            45567777774  6899999999999999999876              33444     579999999999999999999


Q ss_pred             ecCCCc----EEEEeecCC
Q psy14043        178 SDETGL----IIVWMLYKE  192 (205)
Q Consensus       178 ~~~d~~----i~~wd~~~~  192 (205)
                      |+.||+    |.|||+...
T Consensus       425 ~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          425 GSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             ECSSSSSCCEEEEEECCCC
T ss_pred             cccCCCCccEEEEEECCCC
Confidence            999998    999998754

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=98.77  E-value=1.5e-08  Score=80.07  Aligned_cols=77  Identities=9%  Similarity=-0.009  Sum_probs=66.1

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-EeecCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDET  181 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~~d  181 (205)
                      +...+.+++|+++++.+++++.|+.+++||+++..              ...++.+|...+.+++|+|+++.+ ++++.|
T Consensus       168 ~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  233 (433)
T 3bws_A          168 KLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA--------------YKATVDLTGKWSKILLYDPIRDLVYCSNWIS  233 (433)
T ss_dssp             TCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC--------------EEEEEECSSSSEEEEEEETTTTEEEEEETTT
T ss_pred             cCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce--------------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCC
Confidence            44467788999999999999999999999998776              556677899999999999999987 566689


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|++||+.+++
T Consensus       234 ~~i~~~d~~~~~  245 (433)
T 3bws_A          234 EDISVIDRKTKL  245 (433)
T ss_dssp             TEEEEEETTTTE
T ss_pred             CcEEEEECCCCc
Confidence            999999998764

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=98.76  E-value=1.5e-08  Score=79.99  Aligned_cols=79  Identities=18%  Similarity=0.167  Sum_probs=63.9

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ...+++|+|++..+++++.++.+++||..++....         ......+.+|...|.+++|+++++.+++++.|++|+
T Consensus       124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~  194 (433)
T 3bws_A          124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVR---------LSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH  194 (433)
T ss_dssp             CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEE---------ECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred             CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEee---------ecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence            35578899988888889899999999998776210         001114578999999999999999999999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      +||+.+++
T Consensus       195 ~~d~~~~~  202 (433)
T 3bws_A          195 VFDLKTLA  202 (433)
T ss_dssp             EEETTTCC
T ss_pred             EEECCCce
Confidence            99997754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=98.74  E-value=2.7e-08  Score=78.80  Aligned_cols=76  Identities=17%  Similarity=0.196  Sum_probs=62.9

Q ss_pred             CCccccccccccCCCeeeeccccc---ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEE-ee
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDG---LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT-SS  178 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~la-s~  178 (205)
                      +...+.+++|+|+++.+++++.++   .+++||+.++.              . ..+.+|...+.+++|||||++|+ ++
T Consensus       177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------------~-~~l~~~~~~~~~~~~spdg~~la~~~  241 (415)
T 2hqs_A          177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------------V-RQVASFPRHNGAPAFSPDGSKLAFAL  241 (415)
T ss_dssp             ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------------E-EEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------------E-EEeecCCCcccCEEEcCCCCEEEEEE
Confidence            445678899999999999998775   89999998875              2 35667888999999999999888 77


Q ss_pred             cCCCc--EEEEeecCCC
Q psy14043        179 DETGL--IIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~--i~~wd~~~~~  193 (205)
                      +.|+.  |.+||+.+++
T Consensus       242 ~~~g~~~i~~~d~~~~~  258 (415)
T 2hqs_A          242 SKTGSLNLYVMDLASGQ  258 (415)
T ss_dssp             CTTSSCEEEEEETTTCC
T ss_pred             ecCCCceEEEEECCCCC
Confidence            76665  9999998765

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=98.68  E-value=4.7e-08  Score=76.09  Aligned_cols=73  Identities=4%  Similarity=0.013  Sum_probs=59.9

Q ss_pred             cccccccccCCCee-eecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-EeecCCCc
Q psy14043        106 KVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDETGL  183 (205)
Q Consensus       106 ~~~~~~~~~~~~~l-asg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~~d~~  183 (205)
                      .+.+++|+|+++.+ ++++.|+.+++||..++.              ....+..|. .+.+++|+|++++| ++++.|++
T Consensus        33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~--------------~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~   97 (391)
T 1l0q_A           33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN--------------VIATVPAGS-SPQGVAVSPDGKQVYVTNMASST   97 (391)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE--------------EEEEEECSS-SEEEEEECTTSSEEEEEETTTTE
T ss_pred             CcceEEECCCCCEEEEECCCCCeEEEEECCCCe--------------EEEEEECCC-CccceEECCCCCEEEEEECCCCE
Confidence            46889999999876 677799999999998775              445555554 89999999999987 56667899


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      |++||+.+++
T Consensus        98 v~v~d~~~~~  107 (391)
T 1l0q_A           98 LSVIDTTSNT  107 (391)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEECCCCe
Confidence            9999998764

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=98.62  E-value=4.2e-07  Score=74.53  Aligned_cols=66  Identities=14%  Similarity=0.059  Sum_probs=57.5

Q ss_pred             ccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc-cceeeEEEEEEcCCCCEEEeecCCCcEEEEee
Q psy14043        111 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYEKLTSSDETGLIIVWML  189 (205)
Q Consensus       111 ~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~  189 (205)
                      .++|++..+++++.++.+.+||..++.              +..++. ||.  +.+++|||||++|++++.|++|.+||+
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~--------------~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~  207 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKK--------------IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDL  207 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCC--------------EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCce--------------EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEEC
Confidence            488999999999999999999998876              556666 554  889999999999999999999999999


Q ss_pred             --cCC
Q psy14043        190 --YKE  192 (205)
Q Consensus       190 --~~~  192 (205)
                        .++
T Consensus       208 ~~~t~  212 (543)
T 1nir_A          208 WAKEP  212 (543)
T ss_dssp             TSSSC
T ss_pred             cCCCC
Confidence              554

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.57  E-value=8.8e-08  Score=78.82  Aligned_cols=72  Identities=10%  Similarity=-0.063  Sum_probs=61.8

Q ss_pred             cccccccCCCeeeecccc----cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC-
Q psy14043        108 NCLAWHQNQGWIAVGGDD----GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG-  182 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~-  182 (205)
                      ....|+|+|++++.++.+    ..+.+||++++.               ...+.+|...+.+++|||||+.|++++.|+ 
T Consensus       153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---------------~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~  217 (582)
T 3o4h_A          153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---------------LRVFDSGEGSFSSASISPGMKVTAGLETARE  217 (582)
T ss_dssp             CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC---------------CEEECCSSCEEEEEEECTTSCEEEEEECSSC
T ss_pred             ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---------------ceEeecCCCccccceECCCCCEEEEccCCCe
Confidence            567899999999988777    779999988775               246788999999999999999999988999 


Q ss_pred             -cEEEEeecCCCC
Q psy14043        183 -LIIVWMLYKEKN  194 (205)
Q Consensus       183 -~i~~wd~~~~~~  194 (205)
                       .|.+||+.+++.
T Consensus       218 ~~i~~~d~~~~~~  230 (582)
T 3o4h_A          218 ARLVTVDPRDGSV  230 (582)
T ss_dssp             EEEEEECTTTCCE
T ss_pred             eEEEEEcCCCCcE
Confidence             899999987653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=98.57  E-value=5.3e-08  Score=81.94  Aligned_cols=88  Identities=11%  Similarity=0.134  Sum_probs=67.4

Q ss_pred             CCCcccccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee--
Q psy14043         84 RPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG--  161 (205)
Q Consensus        84 R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~--  161 (205)
                      +.+..+++..++.        .....++|+|+++++++ +.|+.+++||..++.              ....+.+|..  
T Consensus         4 ~~~~~~~~~~~~~--------~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------------~~~~~~~~~~~~   60 (723)
T 1xfd_A            4 KVTVEDLFSEDFK--------IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------------STVLIEGKKIES   60 (723)
T ss_dssp             CCCHHHHTCTTTC--------CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------------CEEEECTTTTTT
T ss_pred             cccHHHHhCCCCc--------ccccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------------EEEEeccccccc
Confidence            3556666655432        23567899999998877 689999999999886              3345556654  


Q ss_pred             -eEEEEEEcCCCCEEEeecCC---------CcEEEEeecCCCC
Q psy14043        162 -KVRAIIWNEQYEKLTSSDET---------GLIIVWMLYKEKN  194 (205)
Q Consensus       162 -~v~~~~~s~~~~~las~~~d---------~~i~~wd~~~~~~  194 (205)
                       .|.+++|||||++|++++.+         +.|.+||+.+++.
T Consensus        61 ~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~  103 (723)
T 1xfd_A           61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP  103 (723)
T ss_dssp             TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred             cccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence             48999999999999999875         7788999988764

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=98.56  E-value=1.7e-07  Score=72.85  Aligned_cols=75  Identities=9%  Similarity=-0.032  Sum_probs=60.9

Q ss_pred             CccccccccccCCCeeeecc---cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-Eeec
Q psy14043        104 NTKVNCLAWHQNQGWIAVGG---DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSD  179 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~  179 (205)
                      ...+..+.|+|+++++++++   .++.+++||+.++.              ....+..|. .+.+++|+|+|++| ++++
T Consensus       199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~--------------~~~~~~~~~-~~~~~~~s~dg~~l~~s~~  263 (391)
T 1l0q_A          199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK--------------ITARIPVGP-DPAGIAVTPDGKKVYVALS  263 (391)
T ss_dssp             SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE--------------EEEEEECCS-SEEEEEECTTSSEEEEEET
T ss_pred             CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe--------------EEEEEecCC-CccEEEEccCCCEEEEEcC
Confidence            34567789999999888887   68999999998765              345555554 46899999999887 7889


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|+.|++||+.+++
T Consensus       264 ~d~~v~v~d~~~~~  277 (391)
T 1l0q_A          264 FXNTVSVIDTATNT  277 (391)
T ss_dssp             TTTEEEEEETTTTE
T ss_pred             CCCEEEEEECCCCc
Confidence            99999999998754

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=98.52  E-value=8e-08  Score=84.42  Aligned_cols=77  Identities=16%  Similarity=0.126  Sum_probs=65.2

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+..++|+|+++++++++.++.+++||+.++.              ....+.+|...+.+++|||||++|++++.++
T Consensus       377 ~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~  442 (1045)
T 1k32_A          377 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------------PTVIERSREAMITDFTISDNSRFIAYGFPLK  442 (1045)
T ss_dssp             CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECSSSCCCCEEECTTSCEEEEEEEEC
T ss_pred             CccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------------eEEeccCCCCCccceEECCCCCeEEEEecCc
Confidence            33456788999999999999999999999998876              3344558999999999999999999987754


Q ss_pred             ----------cEEEEeecCCC
Q psy14043        183 ----------LIIVWMLYKEK  193 (205)
Q Consensus       183 ----------~i~~wd~~~~~  193 (205)
                                .|++||+.+++
T Consensus       443 ~~~~~~~~~~~i~l~d~~~g~  463 (1045)
T 1k32_A          443 HGETDGYVMQAIHVYDMEGRK  463 (1045)
T ss_dssp             SSTTCSCCEEEEEEEETTTTE
T ss_pred             cccccCCCCCeEEEEECCCCc
Confidence                      89999998765

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=98.49  E-value=5e-07  Score=71.48  Aligned_cols=76  Identities=13%  Similarity=0.195  Sum_probs=59.1

Q ss_pred             CCccccccccccCCCeee-ecccccc--eEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        103 NNTKVNCLAWHQNQGWIA-VGGDDGL--LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~la-sg~~d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      +...+.+++|+|+++.++ +++.++.  +.+||+.++.              . ..+.+|...+.+++|||||++|++++
T Consensus       221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--------------~-~~l~~~~~~~~~~~~spdg~~l~~~s  285 (415)
T 2hqs_A          221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--------------I-RQVTDGRSNNTEPTWFPDSQNLAFTS  285 (415)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------------E-EECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--------------E-EeCcCCCCcccceEECCCCCEEEEEE
Confidence            344577889999999888 6665555  8888887764              2 56778889999999999999998887


Q ss_pred             C-CC--cEEEEeecCCC
Q psy14043        180 E-TG--LIIVWMLYKEK  193 (205)
Q Consensus       180 ~-d~--~i~~wd~~~~~  193 (205)
                      . ++  .|.+||+.+++
T Consensus       286 ~~~g~~~i~~~d~~~~~  302 (415)
T 2hqs_A          286 DQAGRPQVYKVNINGGA  302 (415)
T ss_dssp             CTTSSCEEEEEETTSSC
T ss_pred             CCCCCcEEEEEECCCCC
Confidence            6 45  67777887765

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=98.42  E-value=7.8e-07  Score=65.84  Aligned_cols=78  Identities=5%  Similarity=0.011  Sum_probs=61.7

Q ss_pred             CccccccccccCCCeeeecc-cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC-
Q psy14043        104 NTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET-  181 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d-  181 (205)
                      ...+..+.|+|+++.++.++ .++.+++|+++....             ....+..|...+.+++|+|+|++|+.++.+ 
T Consensus       172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~  238 (297)
T 2ojh_A          172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-------------SVERITDSAYGDWFPHPSPSGDKVVFVSYDA  238 (297)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-------------CEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred             CCccccceECCCCCEEEEEecCCCCccEEEECCCCC-------------CcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence            34567889999999887665 589999999974321             235667788899999999999999998876 


Q ss_pred             ----------CcEEEEeecCCCC
Q psy14043        182 ----------GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ----------~~i~~wd~~~~~~  194 (205)
                                +.|.+||+.+++.
T Consensus       239 ~~~~~~~~~~~~l~~~d~~~~~~  261 (297)
T 2ojh_A          239 DVFDHPRDLDVRVQLMDMDGGNV  261 (297)
T ss_dssp             TCCSCCSSEEEEEEEEETTSCSC
T ss_pred             CCCcccccCceEEEEEecCCCCc
Confidence                      5699999987653

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=98.38  E-value=3.5e-07  Score=77.20  Aligned_cols=90  Identities=10%  Similarity=0.089  Sum_probs=66.2

Q ss_pred             CCCCCcccccccchhhhcccCCCccccccccccCCCeeeeccc-cc-----ceEEEEecCCCCcchhhhhhcccceecee
Q psy14043         82 DKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGD-DG-----LLKVLKLDTGKESTGQVAAANVNLAMNQS  155 (205)
Q Consensus        82 ~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~-d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~  155 (205)
                      .++++..++++..-+      ....+..++|+|+|+++++++. |+     .+.+||++++..              ...
T Consensus        20 ~~~~~~~~~~~~~~~------~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~--------------~~~   79 (741)
T 2ecf_A           20 AEKLTLEAITGPLPL------SGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT--------------RLL   79 (741)
T ss_dssp             --CCCHHHHTSSSCT------TCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE--------------EEE
T ss_pred             cccccHHHHhccCCc------CCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCce--------------eEc
Confidence            345667777643322      2335788999999999999987 87     899999988752              122


Q ss_pred             cccc--e----------------------eeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        156 LQGH--S----------------------GKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       156 ~~gh--~----------------------~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                      +.+|  .                      ..|.+++|||||++|++++. ++|++||+.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~  139 (741)
T 2ecf_A           80 VDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQE  139 (741)
T ss_dssp             ECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSC
T ss_pred             cchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCC
Confidence            2222  1                      44789999999999999987 99999999887

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=98.32  E-value=1.1e-06  Score=71.94  Aligned_cols=72  Identities=8%  Similarity=0.017  Sum_probs=59.2

Q ss_pred             ccccccccCCCeeeecccccceEEEEe--cCCCCcchhhhhhcccceeceecccceeeEEEEEEcC----CCCEEEeecC
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKL--DTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE----QYEKLTSSDE  180 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~----~~~~las~~~  180 (205)
                      +..++++|+++++++++.|+.|++||+  .+..              ...++.. ...+..++|||    ||++|++++.
T Consensus       181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~--------------~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~  245 (543)
T 1nir_A          181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--------------KVAEIKI-GIEARSVESSKFKGYEDRYTIAGAY  245 (543)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--------------EEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred             cceEEECCCCCEEEEECCCCeEEEEECcCCCCc--------------EEEEEec-CCCcceEEeCCCcCCCCCEEEEEEc
Confidence            567789999999999999999999999  5543              3445553 44579999999    9999999985


Q ss_pred             -CCcEEEEeecCCC
Q psy14043        181 -TGLIIVWMLYKEK  193 (205)
Q Consensus       181 -d~~i~~wd~~~~~  193 (205)
                       |++|.+||..+.+
T Consensus       246 ~~~~v~v~D~~t~~  259 (543)
T 1nir_A          246 WPPQFAIMDGETLE  259 (543)
T ss_dssp             ESSEEEEEETTTCC
T ss_pred             cCCeEEEEeccccc
Confidence             8999999987654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=98.32  E-value=2.7e-07  Score=77.67  Aligned_cols=72  Identities=11%  Similarity=0.148  Sum_probs=57.6

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee---eEEEEEEcCCCCEEEeecC----
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG---KVRAIIWNEQYEKLTSSDE----  180 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~---~v~~~~~s~~~~~las~~~----  180 (205)
                      ..++|+|++++++++ .|+.+++|++.++.              ....+.+|..   .+.+++|||||++|++++.    
T Consensus        19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~   83 (719)
T 1z68_A           19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ--------------SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKL   83 (719)
T ss_dssp             CCCEESSSSEEEEEC-TTSCEEEEESSSCC--------------EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEEC
T ss_pred             CccEECCCCeEEEEc-CCCCEEEEEcCCCc--------------EEEEEccccccccceeeEEECCCCCeEEEEecCcee
Confidence            467899999776666 59999999999876              3334445544   3889999999999999987    


Q ss_pred             -----CCcEEEEeecCCCC
Q psy14043        181 -----TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 -----d~~i~~wd~~~~~~  194 (205)
                           |++|++||+.+++.
T Consensus        84 ~~~s~~~~i~~~d~~~g~~  102 (719)
T 1z68_A           84 WRYSYTATYYIYDLSNGEF  102 (719)
T ss_dssp             SSSCEEEEEEEEETTTTEE
T ss_pred             EEeecceEEEEEECCCCcc
Confidence                 79999999988754

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=98.32  E-value=1.3e-06  Score=73.81  Aligned_cols=73  Identities=11%  Similarity=0.047  Sum_probs=59.6

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      +..++|+|++++++.++. +.+.+|+++++...            ....+.+|...+.+++|||||++|++++. +.|.+
T Consensus       111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~------------~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~  176 (741)
T 2ecf_A          111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA------------AVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWV  176 (741)
T ss_dssp             SCCCEECTTSSEEEEEET-TEEEEEESSSCSTT------------SCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEE
T ss_pred             cceeEECCCCCEEEEEeC-CcEEEEECCCCCcc------------eEEEcccCCcccccccCCCCCCEEEEEeC-CcEEE
Confidence            678899999999999875 89999999876100            01356678888999999999999999884 58999


Q ss_pred             EeecCCC
Q psy14043        187 WMLYKEK  193 (205)
Q Consensus       187 wd~~~~~  193 (205)
                      ||+.++.
T Consensus       177 ~d~~~g~  183 (741)
T 2ecf_A          177 IDLASGR  183 (741)
T ss_dssp             EETTTTE
T ss_pred             EecCCCC
Confidence            9998764

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=98.29  E-value=1e-06  Score=65.24  Aligned_cols=73  Identities=16%  Similarity=0.171  Sum_probs=57.0

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecC-CCCcchhhhhhcccceeceecccc-eeeEEEEEEcCCCCEEEeec-
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSLQGH-SGKVRAIIWNEQYEKLTSSD-  179 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~gh-~~~v~~~~~s~~~~~las~~-  179 (205)
                      +...+.+++|+|+++++++++ ++.+.+|++.+ +.              ......+| ...+.+++|+|+|++|++++ 
T Consensus        40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  104 (297)
T 2ojh_A           40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS--------------PEKVDTGFATICNNDHGISPDGALYAISDK  104 (297)
T ss_dssp             ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS--------------CEECCCTTCCCBCSCCEECTTSSEEEEEEC
T ss_pred             CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC--------------ceEeccccccccccceEECCCCCEEEEEEe
Confidence            455788999999999999986 88999999988 65              22334455 47789999999999999999 


Q ss_pred             -CCCcEEEEeec
Q psy14043        180 -ETGLIIVWMLY  190 (205)
Q Consensus       180 -~d~~i~~wd~~  190 (205)
                       .++.++||++.
T Consensus       105 ~~~~~~~l~~~~  116 (297)
T 2ojh_A          105 VEFGKSAIYLLP  116 (297)
T ss_dssp             TTTSSCEEEEEE
T ss_pred             CCCCcceEEEEE
Confidence             44566666654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=98.25  E-value=1.7e-06  Score=65.54  Aligned_cols=71  Identities=6%  Similarity=-0.095  Sum_probs=56.4

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ....+.|+|++++++++  ++.+.+||+.+..              ....+..+ ..+.+++|+|||++|++++.|+.|.
T Consensus       242 ~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~--------------~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~  304 (337)
T 1pby_B          242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNA--------------SIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLA  304 (337)
T ss_dssp             CEEEEEECTTSSEEEEE--ESEEEEEETTTTE--------------EEEEEECS-SCCCEEEECTTSCEEEEESBSSEEE
T ss_pred             ceeeEEECCCCCEEEEe--CCeEEEEECCCCc--------------CcceecCC-CceeeEEECCCCCEEEEEcCCCcEE
Confidence            34568899999998888  7999999998765              22333222 3467899999999999999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      +||+.+++
T Consensus       305 v~d~~~~~  312 (337)
T 1pby_B          305 AYDAETLE  312 (337)
T ss_dssp             EEETTTCC
T ss_pred             EEECcCCc
Confidence            99998765

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.22  E-value=1.2e-06  Score=67.92  Aligned_cols=72  Identities=15%  Similarity=0.139  Sum_probs=55.5

Q ss_pred             cccccccCCCeeeeccc-ccc--eEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        108 NCLAWHQNQGWIAVGGD-DGL--LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~-d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ...+|+|++++++..+. ++.  +.+|+++++.              ..+...+|...+.+++|||||+.|+.++.++.|
T Consensus        39 ~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------------~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l  104 (388)
T 3pe7_A           39 YQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------------ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL  104 (388)
T ss_dssp             TSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------------EEECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred             cCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------------eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence            34789999999998887 665  5555666654              334445666655577899999999999999999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      .+||+.+++
T Consensus       105 ~~~d~~~g~  113 (388)
T 3pe7_A          105 MRVDLATLE  113 (388)
T ss_dssp             EEEETTTCC
T ss_pred             EEEECCCCc
Confidence            999998865

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=98.20  E-value=2e-06  Score=72.32  Aligned_cols=61  Identities=7%  Similarity=0.007  Sum_probs=45.3

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee------------------eEEEEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG------------------KVRAIIW  168 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~------------------~v~~~~~  168 (205)
                      +..++|+|+|+.+|.++. +.+.+|+..++..              .+...++..                  .+.+++|
T Consensus       116 ~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~--------------~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~  180 (723)
T 1xfd_A          116 LQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA--------------IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW  180 (723)
T ss_dssp             CSBCCBCSSTTCEEEEET-TEEEEESSSSSCC--------------EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE
T ss_pred             ccccEECCCCCEEEEEEC-CeEEEEECCCCce--------------EEEecCCCCCceECcccceeEEEEeccCcceEEE
Confidence            677899999999999875 7899999987652              111222221                  2378999


Q ss_pred             cCCCCEEEeecCCC
Q psy14043        169 NEQYEKLTSSDETG  182 (205)
Q Consensus       169 s~~~~~las~~~d~  182 (205)
                      ||||++|++++.|+
T Consensus       181 SpDg~~la~~~~~~  194 (723)
T 1xfd_A          181 SPDGTRLAYAAIND  194 (723)
T ss_dssp             CTTSSEEEEEEEEC
T ss_pred             CCCCCEEEEEEECC
Confidence            99999999998653

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.20  E-value=4.4e-07  Score=74.64  Aligned_cols=72  Identities=10%  Similarity=-0.007  Sum_probs=58.4

Q ss_pred             CCccccccccccCCCeeeeccccc--ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEE--------EcCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII--------WNEQY  172 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~--------~s~~~  172 (205)
                      +...+...+|+|||+.++++..++  .|.+||++++.              .. .+.+|...+.+++        |||||
T Consensus       193 ~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~spdg  257 (582)
T 3o4h_A          193 GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS--------------VE-DLELPSKDFSSYRPTAITWLGYLPDG  257 (582)
T ss_dssp             SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC--------------EE-ECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred             CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc--------------EE-EccCCCcChhhhhhccccceeEcCCC
Confidence            334567889999999999877788  78889888765              22 5566766666666        99999


Q ss_pred             CEEEeecCCCcEEEEee
Q psy14043        173 EKLTSSDETGLIIVWML  189 (205)
Q Consensus       173 ~~las~~~d~~i~~wd~  189 (205)
                      +.+++++.|+++++|++
T Consensus       258 ~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          258 RLAVVARREGRSAVFID  274 (582)
T ss_dssp             CEEEEEEETTEEEEEET
T ss_pred             cEEEEEEcCCcEEEEEE
Confidence            99999999999999998

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=98.16  E-value=1.3e-06  Score=73.63  Aligned_cols=72  Identities=11%  Similarity=0.153  Sum_probs=56.4

Q ss_pred             ccccccccCCCeeeeccc---------ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        107 VNCLAWHQNQGWIAVGGD---------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      +..++|+|+|++++.++.         ++.+++||++++....            ...+   ...+..++|||||+.||+
T Consensus        62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------------~~~l---~~~~~~~~~SPDG~~la~  126 (719)
T 1z68_A           62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------------GNEL---PRPIQYLCWSPVGSKLAY  126 (719)
T ss_dssp             CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------------SSCC---CSSBCCEEECSSTTCEEE
T ss_pred             eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------------ceec---CcccccceECCCCCEEEE
Confidence            678899999999998876         7899999998875100            0112   234788999999999999


Q ss_pred             ecCCCcEEEEeecCCCC
Q psy14043        178 SDETGLIIVWMLYKEKN  194 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~  194 (205)
                      ++ |+.|++||+.++..
T Consensus       127 ~~-~~~i~~~~~~~g~~  142 (719)
T 1z68_A          127 VY-QNNIYLKQRPGDPP  142 (719)
T ss_dssp             EE-TTEEEEESSTTSCC
T ss_pred             EE-CCeEEEEeCCCCCc
Confidence            86 78999999977653

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=98.15  E-value=4.7e-06  Score=69.96  Aligned_cols=74  Identities=12%  Similarity=0.121  Sum_probs=57.5

Q ss_pred             ccccccccCCCeeeecc---------------------------------cccceEEEEecCCCCcchhhhhhcccceec
Q psy14043        107 VNCLAWHQNQGWIAVGG---------------------------------DDGLLKVLKLDTGKESTGQVAAANVNLAMN  153 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~---------------------------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~  153 (205)
                      +..+.|+|++++++.++                                 .+..+.+||++++...            ..
T Consensus       183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~------------~~  250 (706)
T 2z3z_A          183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV------------YL  250 (706)
T ss_dssp             CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE------------EC
T ss_pred             CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE------------ee
Confidence            46788999999999887                                 4467888888776410            11


Q ss_pred             eecccceeeEEEEEEcCCCCEEEeecCCC-----cEEEEeecCC
Q psy14043        154 QSLQGHSGKVRAIIWNEQYEKLTSSDETG-----LIIVWMLYKE  192 (205)
Q Consensus       154 ~~~~gh~~~v~~~~~s~~~~~las~~~d~-----~i~~wd~~~~  192 (205)
                      ....+|...+.+++|||||++|++++.|+     .|.+||+.++
T Consensus       251 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g  294 (706)
T 2z3z_A          251 QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG  294 (706)
T ss_dssp             CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred             ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence            11235778899999999999999988776     8999999887

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=98.15  E-value=2.3e-06  Score=71.85  Aligned_cols=75  Identities=12%  Similarity=0.111  Sum_probs=56.5

Q ss_pred             CccccccccccCCCeeeecccccceEEEEecC-----CCCcchhhhhhcccceeceecccce--------------eeEE
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-----GKESTGQVAAANVNLAMNQSLQGHS--------------GKVR  164 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~gh~--------------~~v~  164 (205)
                      ...+..++|+|+++.++.. .++.|.+|++.+     +...              +....+.              ..+.
T Consensus       120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--------------~~~~~~~~~~~~g~~~~~ee~~~~~  184 (706)
T 2z3z_A          120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--------------AVTIDGTETLVYGQAVHQREFGIEK  184 (706)
T ss_dssp             TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--------------ESCSCCBTTEEESSCCGGGCTTCCC
T ss_pred             cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--------------EeccCCCCCeEcccchhhhhcCCCc
Confidence            3457788999999999995 789999999987     5411              1111222              2357


Q ss_pred             EEEEcCCCCEEEeec---------------------------------CCCcEEEEeecCCC
Q psy14043        165 AIIWNEQYEKLTSSD---------------------------------ETGLIIVWMLYKEK  193 (205)
Q Consensus       165 ~~~~s~~~~~las~~---------------------------------~d~~i~~wd~~~~~  193 (205)
                      +++|||||++|++++                                 .+..|.+||+.+++
T Consensus       185 ~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~  246 (706)
T 2z3z_A          185 GTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK  246 (706)
T ss_dssp             SEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred             eEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence            899999999999998                                 45689999998765

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=98.14  E-value=3.4e-06  Score=64.54  Aligned_cols=73  Identities=8%  Similarity=0.085  Sum_probs=53.2

Q ss_pred             ccccccccCCCee-eecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC-CCcE
Q psy14043        107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE-TGLI  184 (205)
Q Consensus       107 ~~~~~~~~~~~~l-asg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~-d~~i  184 (205)
                      ...++|+|+++++ ++...++.+.+|+++....           +.....+..|...+.+++|+|||++|++++. ++.|
T Consensus       242 ~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v  310 (347)
T 3hfq_A          242 AAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH-----------LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNA  310 (347)
T ss_dssp             EEEEEECTTSCEEEEEEETTTEEEEEEECGGGC-----------EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEE
T ss_pred             ceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc-----------EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcE
Confidence            5568899999977 5555689999999973210           1133444555566789999999998888776 4899


Q ss_pred             EEEeec
Q psy14043        185 IVWMLY  190 (205)
Q Consensus       185 ~~wd~~  190 (205)
                      .+|++.
T Consensus       311 ~v~~~d  316 (347)
T 3hfq_A          311 TLYARD  316 (347)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            999553

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=98.12  E-value=7.2e-06  Score=62.15  Aligned_cols=75  Identities=12%  Similarity=0.054  Sum_probs=55.3

Q ss_pred             CCccccccccccCCCeeeecccc-cceEEEEec--CCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDD-GLLKVLKLD--TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d-~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      +...+..++|+|+++++++++.+ +.+.+|+++  ++..            .....+..+. .+..++|+|+|++|+.++
T Consensus        36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~  102 (343)
T 1ri6_A           36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL------------TFAAESALPG-SLTHISTDHQGQFVFVGS  102 (343)
T ss_dssp             CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE------------EEEEEEECSS-CCSEEEECTTSSEEEEEE
T ss_pred             cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce------------eeccccccCC-CCcEEEEcCCCCEEEEEe
Confidence            34467789999999988888776 999999998  3331            1122333333 678999999999876665


Q ss_pred             -CCCcEEEEeec
Q psy14043        180 -ETGLIIVWMLY  190 (205)
Q Consensus       180 -~d~~i~~wd~~  190 (205)
                       .++.|.+||+.
T Consensus       103 ~~~~~i~~~d~~  114 (343)
T 1ri6_A          103 YNAGNVSVTRLE  114 (343)
T ss_dssp             TTTTEEEEEEEE
T ss_pred             cCCCeEEEEECC
Confidence             58899999994

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=98.07  E-value=4.9e-06  Score=70.55  Aligned_cols=69  Identities=10%  Similarity=0.054  Sum_probs=56.9

Q ss_pred             cccccCCCeeeecccc---------cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        110 LAWHQNQGWIAVGGDD---------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       110 ~~~~~~~~~lasg~~d---------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|+||+++++.++.+         +.+.+||+.++.               ...+.+|...+..++|||||+.||.+ .
T Consensus        67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~---------------~~~l~~~~~~~~~~~~SPdG~~la~~-~  130 (740)
T 4a5s_A           67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ---------------LITEERIPNNTQWVTWSPVGHKLAYV-W  130 (740)
T ss_dssp             EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE---------------ECCSSCCCTTEEEEEECSSTTCEEEE-E
T ss_pred             eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc---------------EEEcccCCCcceeeEECCCCCEEEEE-E
Confidence            6789999999998876         455699998875               23466777889999999999999998 4


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      |+.|.+||+.++..
T Consensus       131 ~~~i~~~~~~~~~~  144 (740)
T 4a5s_A          131 NNDIYVKIEPNLPS  144 (740)
T ss_dssp             TTEEEEESSTTSCC
T ss_pred             CCeEEEEECCCCce
Confidence            68999999987654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=98.06  E-value=5.8e-06  Score=62.90  Aligned_cols=71  Identities=10%  Similarity=-0.064  Sum_probs=55.3

Q ss_pred             ccccccccc-CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        106 KVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       106 ~~~~~~~~~-~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ....+.++| +++.++++  ++.+.+||+.++.              ....+.. ...+.+++|+|+|++|++++.++.|
T Consensus       256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~--------------~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v  318 (349)
T 1jmx_B          256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK--------------LIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDL  318 (349)
T ss_dssp             CEEEEEECSSCTTEEEEE--ESEEEEEETTTTE--------------EEEEEEC-SSCCCEEEECSSSSCEEEESBSSEE
T ss_pred             cceeeEecCCCCCEEEEE--cCeEEEEECccCe--------------EEEEEcC-CCCccceEECCCCCEEEEecCCCeE
Confidence            345667889 99988888  8899999998765              2233322 2236789999999999889999999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      .+||+.+++
T Consensus       319 ~v~d~~~~~  327 (349)
T 1jmx_B          319 AVFNPDTLE  327 (349)
T ss_dssp             EEEETTTTE
T ss_pred             EEEeccccc
Confidence            999998765

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=98.04  E-value=1.9e-05  Score=60.74  Aligned_cols=77  Identities=8%  Similarity=0.061  Sum_probs=54.2

Q ss_pred             ccccccccccCCCeeeecc-cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC--C
Q psy14043        105 TKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE--T  181 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~--d  181 (205)
                      ...+.+.|+|++++++..+ .++.+.+|+++++...         .+.......++.....+++|||||++|+.++.  +
T Consensus       211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~---------~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~  281 (361)
T 3scy_A          211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD---------EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA  281 (361)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE---------EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred             CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE---------EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence            3456788999999776665 6899999999855310         00011223344455689999999999866554  5


Q ss_pred             CcEEEEeec
Q psy14043        182 GLIIVWMLY  190 (205)
Q Consensus       182 ~~i~~wd~~  190 (205)
                      ++|.+|++.
T Consensus       282 ~~i~v~~~~  290 (361)
T 3scy_A          282 DGVAIFKVD  290 (361)
T ss_dssp             CEEEEEEEC
T ss_pred             CEEEEEEEc
Confidence            899999996

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=98.04  E-value=6.6e-06  Score=62.35  Aligned_cols=71  Identities=8%  Similarity=-0.044  Sum_probs=55.1

Q ss_pred             ccccccCCCeeeecc-cccceEEEEecCCCCcchhhhhhccccee-ceecccceeeEEEEEEcCCCCEEEeecCCC---c
Q psy14043        109 CLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAM-NQSLQGHSGKVRAIIWNEQYEKLTSSDETG---L  183 (205)
Q Consensus       109 ~~~~~~~~~~lasg~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~gh~~~v~~~~~s~~~~~las~~~d~---~  183 (205)
                      .++++|+++++..++ .++.+.+||..++.              . ...+..+...+.+++|+|+|++|+++..++   .
T Consensus        44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  109 (331)
T 3u4y_A           44 DTAITSDCSNVVVTSDFCQTLVQIETQLEP--------------PKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFN  109 (331)
T ss_dssp             EEEECSSSCEEEEEESTTCEEEEEECSSSS--------------CEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCE
T ss_pred             eEEEcCCCCEEEEEeCCCCeEEEEECCCCc--------------eeEEecccCCCCccceEECCCCCEEEEecCCCCccc
Confidence            788999998665554 48899999998876              3 455566666666699999999999655553   8


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      |.+||+.+++
T Consensus       110 i~v~d~~~~~  119 (331)
T 3u4y_A          110 MQSYSFLKNK  119 (331)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEECCCCC
Confidence            9999998765

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=98.03  E-value=4.8e-06  Score=63.14  Aligned_cols=74  Identities=12%  Similarity=0.223  Sum_probs=54.1

Q ss_pred             cccccccccCCCeeeecc-cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec-CCCc
Q psy14043        106 KVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD-ETGL  183 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~-~d~~  183 (205)
                      ....++|+|+++++++++ .++.+.+|+++.+...           .....+.++ ..+.+++|+|+|++|++++ .|+.
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-----------~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~  152 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV-----------GVVDVVEGL-DGCHSANISPDNRTLWVPALKQDR  152 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE-----------EEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTE
T ss_pred             CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc-----------cccccccCC-CCceEEEECCCCCEEEEecCCCCE
Confidence            567788999999776554 5888999999622100           022333333 3478899999999888777 8999


Q ss_pred             EEEEeecC
Q psy14043        184 IIVWMLYK  191 (205)
Q Consensus       184 i~~wd~~~  191 (205)
                      |.+||+.+
T Consensus       153 v~~~d~~~  160 (343)
T 1ri6_A          153 ICLFTVSD  160 (343)
T ss_dssp             EEEEEECT
T ss_pred             EEEEEecC
Confidence            99999987

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=97.98  E-value=1.3e-05  Score=70.45  Aligned_cols=72  Identities=15%  Similarity=0.082  Sum_probs=59.4

Q ss_pred             cccccccccCCCeeeecccccceE-EEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLK-VLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      .+..+.|+ +++.++.++.+..+. +|+..++.              . ..+.+|...+.+++|||||++|++++.|+.|
T Consensus       339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------------~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v  402 (1045)
T 1k32_A          339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------------A-EKFEENLGNVFAMGVDRNGKFAVVANDRFEI  402 (1045)
T ss_dssp             EEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------------E-EECCCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred             eEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------------c-eEecCCccceeeeEECCCCCEEEEECCCCeE
Confidence            56678899 999998888777777 77877653              1 3344888899999999999999999999999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      ++||+.+++
T Consensus       403 ~~~d~~tg~  411 (1045)
T 1k32_A          403 MTVDLETGK  411 (1045)
T ss_dssp             EEEETTTCC
T ss_pred             EEEECCCCc
Confidence            999998765

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=97.97  E-value=2.6e-05  Score=59.38  Aligned_cols=74  Identities=14%  Similarity=0.098  Sum_probs=58.1

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec----ccceeeEEEEEEcCCCCEEEeec-C
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL----QGHSGKVRAIIWNEQYEKLTSSD-E  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~gh~~~v~~~~~s~~~~~las~~-~  180 (205)
                      ....+.++|+++.++.++.++.+.+||..++.              ....+    .++...+.+++|+|+|++|+.++ .
T Consensus       186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~  251 (353)
T 3vgz_A          186 MSTGLALDSEGKRLYTTNADGELITIDTADNK--------------ILSRKKLLDDGKEHFFINISLDTARQRAFITDSK  251 (353)
T ss_dssp             TCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------------EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred             ccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------------EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence            46778899999999998889999999998765              22222    24666788999999999766555 4


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      ++.|.+||+.+++
T Consensus       252 ~~~v~~~d~~~~~  264 (353)
T 3vgz_A          252 AAEVLVVDTRNGN  264 (353)
T ss_dssp             SSEEEEEETTTCC
T ss_pred             CCEEEEEECCCCc
Confidence            5999999998765

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=97.95  E-value=9.3e-06  Score=68.37  Aligned_cols=74  Identities=18%  Similarity=0.166  Sum_probs=55.9

Q ss_pred             cccccccccCCCeee-----ecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        106 KVNCLAWHQNQGWIA-----VGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~la-----sg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+...+|+|+|+++|     .|+.+..|++||++++....            ...+.+..  ..+++|||||+.|+.++.
T Consensus       122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~------------~~~~~~~~--~~~~~wspDg~~l~~~~~  187 (695)
T 2bkl_A          122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK------------VDVIEGGK--YATPKWTPDSKGFYYEWL  187 (695)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS------------SCCBSCCT--TCCCEECTTSSEEEEEEC
T ss_pred             EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC------------CcccCccc--ccceEEecCCCEEEEEEe
Confidence            466788999999999     67777899999999876210            01112111  157999999999999999


Q ss_pred             CCc-------------EEEEeecCCC
Q psy14043        181 TGL-------------IIVWMLYKEK  193 (205)
Q Consensus       181 d~~-------------i~~wd~~~~~  193 (205)
                      |.+             |++|++.++.
T Consensus       188 d~~~~~~~~~~~~~~~v~~~~l~t~~  213 (695)
T 2bkl_A          188 PTDPSIKVDERPGYTTIRYHTLGTEP  213 (695)
T ss_dssp             CCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred             cCCCCCccccCCCCCEEEEEECCCCc
Confidence            887             9999998765

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=97.94  E-value=1.3e-05  Score=62.24  Aligned_cols=66  Identities=15%  Similarity=0.197  Sum_probs=52.3

Q ss_pred             cccccCCCeeeeccc-----------ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        110 LAWHQNQGWIAVGGD-----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       110 ~~~~~~~~~lasg~~-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ++++++++.+.....           ...+.+||..+.+              ...++..+.  ..+++|+|||++|+++
T Consensus       259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--------------~v~~i~~~~--p~~ia~spdg~~l~v~  322 (361)
T 2oiz_A          259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--------------RVARIPGRD--ALSMTIDQQRNLMLTL  322 (361)
T ss_dssp             EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--------------EEEEEECTT--CCEEEEETTTTEEEEE
T ss_pred             EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc--------------EEEEEecCC--eeEEEECCCCCEEEEe
Confidence            577888776655422           3478888988776              556666666  8999999999999998


Q ss_pred             cCCCcEEEEeecCC
Q psy14043        179 DETGLIIVWMLYKE  192 (205)
Q Consensus       179 ~~d~~i~~wd~~~~  192 (205)
                      +. ++|.+||+.++
T Consensus       323 n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          323 DG-GNVNVYDISQP  335 (361)
T ss_dssp             CS-SCEEEEECSSS
T ss_pred             CC-CeEEEEECCCC
Confidence            87 99999999988

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=97.94  E-value=4e-05  Score=58.54  Aligned_cols=76  Identities=9%  Similarity=0.115  Sum_probs=55.1

Q ss_pred             CccccccccccCCCeeeecc-cccceEEEEecCCCCcchhhhhhcccceeceec---------ccceeeEEEEEEcCCCC
Q psy14043        104 NTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL---------QGHSGKVRAIIWNEQYE  173 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~---------~gh~~~v~~~~~s~~~~  173 (205)
                      ......++++|+++++++++ .++.+.+|+++......           ....+         ..+...+.+++|+|||+
T Consensus        85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~-----------~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~  153 (347)
T 3hfq_A           85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALT-----------LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR  153 (347)
T ss_dssp             SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEE-----------EEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred             CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCee-----------ecceeecCCCCCCccccCCCceEEEECCCCc
Confidence            34567788999999888776 67999999996432100           11111         11334588999999999


Q ss_pred             EEEeecCCCcEEEEeec
Q psy14043        174 KLTSSDETGLIIVWMLY  190 (205)
Q Consensus       174 ~las~~~d~~i~~wd~~  190 (205)
                      .+++...++.|.+||+.
T Consensus       154 l~v~~~~~~~v~~~~~~  170 (347)
T 3hfq_A          154 LAVIDLGSDKVYVYNVS  170 (347)
T ss_dssp             EEEEETTTTEEEEEEEC
T ss_pred             EEEEeCCCCEEEEEEEC
Confidence            77777889999999998

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=97.92  E-value=8.7e-06  Score=62.07  Aligned_cols=74  Identities=12%  Similarity=0.157  Sum_probs=58.3

Q ss_pred             ccccccccCCCeeeecc--cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        107 VNCLAWHQNQGWIAVGG--DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ...+.++|+++.+..++  .++.+.+||..+..              ....+..+...+.+++|+|+|++|+.++.++.|
T Consensus       143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i  208 (353)
T 3vgz_A          143 PRELVADDATNTVYISGIGKESVIWVVDGGNIK--------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGEL  208 (353)
T ss_dssp             EEEEEEETTTTEEEEEEESSSCEEEEEETTTTE--------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEE
T ss_pred             CceEEECCCCCEEEEEecCCCceEEEEcCCCCc--------------eEEEecCCCCccceEEECCCCCEEEEEcCCCeE
Confidence            45678999998776664  47889999998765              334444455557889999999999999999999


Q ss_pred             EEEeecCCCC
Q psy14043        185 IVWMLYKEKN  194 (205)
Q Consensus       185 ~~wd~~~~~~  194 (205)
                      .+||+.+++.
T Consensus       209 ~~~d~~~~~~  218 (353)
T 3vgz_A          209 ITIDTADNKI  218 (353)
T ss_dssp             EEEETTTTEE
T ss_pred             EEEECCCCeE
Confidence            9999887653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=97.90  E-value=5.8e-05  Score=58.36  Aligned_cols=73  Identities=12%  Similarity=0.186  Sum_probs=53.3

Q ss_pred             ccccccccCCC--eeeecc-------------cccceEEEEecC-CCCcchhhhhhcccceeceecc----cceeeEEEE
Q psy14043        107 VNCLAWHQNQG--WIAVGG-------------DDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSLQ----GHSGKVRAI  166 (205)
Q Consensus       107 ~~~~~~~~~~~--~lasg~-------------~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~----gh~~~v~~~  166 (205)
                      ...++++|+++  ++++++             .++.+.+|+++. +.              +...+.    ++...+.++
T Consensus        85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~  150 (365)
T 1jof_A           85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK--------------LEKNVQNYEYQENTGIHGM  150 (365)
T ss_dssp             GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC--------------EEEEEEEEECCTTCCEEEE
T ss_pred             CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc--------------CcceEeeEEeCCCCcceEE
Confidence            45688999998  455553             688999999974 32              111111    355678999


Q ss_pred             EEcCCCCEEEeec-CCCcEEEEeec-CCC
Q psy14043        167 IWNEQYEKLTSSD-ETGLIIVWMLY-KEK  193 (205)
Q Consensus       167 ~~s~~~~~las~~-~d~~i~~wd~~-~~~  193 (205)
                      +|+|||++|++++ .+++|.+||+. +++
T Consensus       151 ~~spdG~~l~~~~~~~~~v~~~~~~~~g~  179 (365)
T 1jof_A          151 VFDPTETYLYSADLTANKLWTHRKLASGE  179 (365)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred             EECCCCCEEEEEcCCCCEEEEEEECCCCC
Confidence            9999999888765 46899999998 554

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=97.88  E-value=1.2e-05  Score=66.89  Aligned_cols=79  Identities=8%  Similarity=-0.059  Sum_probs=56.9

Q ss_pred             ccccccccccCCCeeeecccc----------cceEEEEecCCCCcchhhhhhcccceeceecc-cceeeEEEEEEcCCCC
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDD----------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYE  173 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~s~~~~  173 (205)
                      .....++|+|+++.++..+.+          ..+.+|++++.......         ....+. .+...+..++|||||+
T Consensus       130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~~l~~~~~~~~~~~~~SpDG~  200 (662)
T 3azo_A          130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS---------AVRELSDDAHRFVTGPRLSPDGR  200 (662)
T ss_dssp             EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG---------GSEESSCSCSSEECCCEECTTSS
T ss_pred             ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC---------ceeEEEecCCCcccCceECCCCC
Confidence            346678899999999988876          57888888762100000         113444 5567888999999999


Q ss_pred             EEEeecCCC--------cEEEEeec-CC
Q psy14043        174 KLTSSDETG--------LIIVWMLY-KE  192 (205)
Q Consensus       174 ~las~~~d~--------~i~~wd~~-~~  192 (205)
                      +|+.++.++        .|.+||+. ++
T Consensus       201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g  228 (662)
T 3azo_A          201 QAVWLAWDHPRMPWEGTELKTARVTEDG  228 (662)
T ss_dssp             EEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred             EEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence            999888653        79999998 45

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=97.86  E-value=4.3e-05  Score=63.64  Aligned_cols=78  Identities=14%  Similarity=0.059  Sum_probs=55.0

Q ss_pred             ccccccccccCCCeeeecccc--------cceEEEEec-CCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDD--------GLLKVLKLD-TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL  175 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d--------~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l  175 (205)
                      ..+..+.|+|+|++++..+.+        ..+.+|+++ ++...           .......+|...+..++|||||+.+
T Consensus       188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-----------~~~~l~~~~~~~~~~~~~spdg~l~  256 (662)
T 3azo_A          188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-----------DTRTLLGGPEEAIAQAEWAPDGSLI  256 (662)
T ss_dssp             SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-----------EEEEEEEETTBCEEEEEECTTSCEE
T ss_pred             CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc-----------ccEEeCCCCCceEcceEECCCCeEE
Confidence            345667899999999887654        478999998 44100           0222334567889999999999998


Q ss_pred             EeecCCC--cEEEEeecCCC
Q psy14043        176 TSSDETG--LIIVWMLYKEK  193 (205)
Q Consensus       176 as~~~d~--~i~~wd~~~~~  193 (205)
                      ++++.|+  .|.+||+.+++
T Consensus       257 ~~~~~~~~~~l~~~~~~~~~  276 (662)
T 3azo_A          257 VATDRTGWWNLHRVDPATGA  276 (662)
T ss_dssp             EEECTTSSCEEEEECTTTCC
T ss_pred             EEECCCCCeEEEEEECCCCc
Confidence            9999898  55566654443

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=97.82  E-value=7.5e-05  Score=56.45  Aligned_cols=68  Identities=9%  Similarity=-0.009  Sum_probs=50.2

Q ss_pred             cccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC-CCcEEEEee
Q psy14043        112 WHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE-TGLIIVWML  189 (205)
Q Consensus       112 ~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~-d~~i~~wd~  189 (205)
                      |..++ ..+++.+.++.+.+||..++.              ....+..+...+ .++|+|+|++|+.++. ++.|.+||+
T Consensus         5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~--------------~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~   69 (331)
T 3u4y_A            5 FQTTSNFGIVVEQHLRRISFFSTDTLE--------------ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIET   69 (331)
T ss_dssp             --CCCCEEEEEEGGGTEEEEEETTTCC--------------EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEEC
T ss_pred             EcCCCCEEEEEecCCCeEEEEeCcccc--------------eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEEC
Confidence            44444 457788889999999998876              334444555566 9999999997665554 899999999


Q ss_pred             cCCCC
Q psy14043        190 YKEKN  194 (205)
Q Consensus       190 ~~~~~  194 (205)
                      .+++.
T Consensus        70 ~~~~~   74 (331)
T 3u4y_A           70 QLEPP   74 (331)
T ss_dssp             SSSSC
T ss_pred             CCCce
Confidence            88764

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=97.80  E-value=0.00011  Score=56.37  Aligned_cols=82  Identities=7%  Similarity=0.135  Sum_probs=53.1

Q ss_pred             ccccccccCCCeeee-cccccceEEEEecCCCCcchhhhhhccccee----ceecccceeeEEEEEEcCCCCEEEeec-C
Q psy14043        107 VNCLAWHQNQGWIAV-GGDDGLLKVLKLDTGKESTGQVAAANVNLAM----NQSLQGHSGKVRAIIWNEQYEKLTSSD-E  180 (205)
Q Consensus       107 ~~~~~~~~~~~~las-g~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~----~~~~~gh~~~v~~~~~s~~~~~las~~-~  180 (205)
                      ...+.|+|++++++. +..++.+.+|+++........     ..+..    ......+......++|+|||++|+.++ .
T Consensus       157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~  231 (361)
T 3scy_A          157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNK-----EKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI  231 (361)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTC-----CCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred             ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccc-----cceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence            356899999986654 445789999999865410000     00000    011122334567899999999877666 6


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      +++|.+||+.++.
T Consensus       232 ~~~v~v~~~~~g~  244 (361)
T 3scy_A          232 GGTVIAFRYADGM  244 (361)
T ss_dssp             TCEEEEEEEETTE
T ss_pred             CCeEEEEEecCCc
Confidence            9999999998653

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=97.79  E-value=2.9e-05  Score=58.64  Aligned_cols=73  Identities=8%  Similarity=-0.033  Sum_probs=55.1

Q ss_pred             ccccccccCCCee-eecccccceEEEEecCCCCcchhhhhhcccceeceecc-c----ceeeEEEEEEcCCCCEEEeec-
Q psy14043        107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-G----HSGKVRAIIWNEQYEKLTSSD-  179 (205)
Q Consensus       107 ~~~~~~~~~~~~l-asg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-g----h~~~v~~~~~s~~~~~las~~-  179 (205)
                      ...++++|+++.+ ++++.++.+.+||..++.              ....+. +    |...+.+++|+|+|++|++++ 
T Consensus        36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  101 (337)
T 1pby_B           36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------------TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYES  101 (337)
T ss_dssp             CCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------------EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred             ccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------------eEeeEEcCCcccccccccceEECCCCCEEEEEec
Confidence            6778899999765 566678899999998765              222222 1    334567899999999998886 


Q ss_pred             -----------CCCcEEEEeecCCC
Q psy14043        180 -----------ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 -----------~d~~i~~wd~~~~~  193 (205)
                                 .++.|.+||+.+++
T Consensus       102 ~~~~~~~~~~~~~~~i~v~d~~~~~  126 (337)
T 1pby_B          102 PVRLELTHFEVQPTRVALYDAETLS  126 (337)
T ss_dssp             EEEECSSCEEECCCEEEEEETTTTE
T ss_pred             ccccccccccccCceEEEEECCCCc
Confidence                       67999999997754

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=97.78  E-value=2.3e-05  Score=66.14  Aligned_cols=73  Identities=14%  Similarity=0.215  Sum_probs=54.5

Q ss_pred             cccccccccCCCeeeeccccc-----ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDG-----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+...+|+|+|+++|.++.++     .|++||++++.              ...... +...+.+++|||||+.|+.++.
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------------~~~~~~-~~~~~~~~~wspDg~~l~~~~~  190 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------------ELPDVL-ERVKFSCMAWTHDGKGMFYNAY  190 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------------EEEEEE-EEECSCCEEECTTSSEEEEEEC
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------------CCcccc-cCcccceEEEEeCCCEEEEEEE
Confidence            356778999999998765543     89999998875              111111 1123567999999999999988


Q ss_pred             CCc----------------EEEEeecCCC
Q psy14043        181 TGL----------------IIVWMLYKEK  193 (205)
Q Consensus       181 d~~----------------i~~wd~~~~~  193 (205)
                      |+.                |.+|++.++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~  219 (710)
T 2xdw_A          191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQ  219 (710)
T ss_dssp             CCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred             CCccccccccccccCCCCEEEEEECCCCc
Confidence            876                9999997765

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=97.75  E-value=8.1e-06  Score=69.20  Aligned_cols=72  Identities=10%  Similarity=0.119  Sum_probs=56.1

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceeccccee-----eEEEEEEcCCCCEEEeecCC
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG-----KVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~-----~v~~~~~s~~~~~las~~~d  181 (205)
                      ...+.|+|++++++++  |+.|++|++.++.              ....+.+|..     ....++|||||++|++++.+
T Consensus        19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~   82 (740)
T 4a5s_A           19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------------SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNY   82 (740)
T ss_dssp             CCCEEECSSSEEEEEE--TTEEEEEETTTCC--------------EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred             ccccEECCCCcEEEEc--CCcEEEEECCCCc--------------eEEEEechhhhhhcccccceEECCCCCEEEEEECC
Confidence            5578999999999987  8999999999886              2233445442     33458899999999999987


Q ss_pred             ---------CcEEEEeecCCCC
Q psy14043        182 ---------GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ---------~~i~~wd~~~~~~  194 (205)
                               +.+.+||+.+++.
T Consensus        83 ~~~~r~~~~~~~~~~d~~~~~~  104 (740)
T 4a5s_A           83 VKQWRHSYTASYDIYDLNKRQL  104 (740)
T ss_dssp             EECSSSCEEEEEEEEETTTTEE
T ss_pred             eeeEEEccceEEEEEECCCCcE
Confidence                     4566999988764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.75  E-value=2.6e-05  Score=60.35  Aligned_cols=73  Identities=12%  Similarity=0.015  Sum_probs=50.9

Q ss_pred             ccccccccCCCeeeecccc---cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCc
Q psy14043        107 VNCLAWHQNQGWIAVGGDD---GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL  183 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~  183 (205)
                      +..++|+|+|++++.....   ..+.+|+..++.              ..+...++......+.|||||++|+.++.++.
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------------~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~  103 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------------AVQLTEGKGDNTFGGFISTDERAFFYVKNELN  103 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------------EEECCCSSCBCTTTCEECTTSSEEEEEETTTE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------------EEEeecCCCCccccceECCCCCEEEEEEcCCc
Confidence            5678899999998776433   356666766553              11122223222334789999999999999999


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      |.+||+.+++
T Consensus       104 l~~~d~~~~~  113 (396)
T 3c5m_A          104 LMKVDLETLE  113 (396)
T ss_dssp             EEEEETTTCC
T ss_pred             EEEEECCCCC
Confidence            9999987764

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=97.72  E-value=4.6e-05  Score=57.82  Aligned_cols=70  Identities=13%  Similarity=0.013  Sum_probs=53.7

Q ss_pred             cccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccce-eeEEEEEEcCCCCEE-EeecCCCcEEEE
Q psy14043        110 LAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS-GKVRAIIWNEQYEKL-TSSDETGLIIVW  187 (205)
Q Consensus       110 ~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~v~~~~~s~~~~~l-as~~~d~~i~~w  187 (205)
                      +++++++..+++++.++.+.+||..++.              ...++..+. ..+..++|+|+|+++ ++++.++.|.+|
T Consensus         5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~   70 (349)
T 1jmx_B            5 PALKAGHEYMIVTNYPNNLHVVDVASDT--------------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI   70 (349)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTE--------------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ccccCCCEEEEEeCCCCeEEEEECCCCc--------------EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEE
Confidence            4577888899999999999999998775              333333322 246789999999864 566789999999


Q ss_pred             eecCCC
Q psy14043        188 MLYKEK  193 (205)
Q Consensus       188 d~~~~~  193 (205)
                      |+.+++
T Consensus        71 d~~t~~   76 (349)
T 1jmx_B           71 DLDTCK   76 (349)
T ss_dssp             ETTTTE
T ss_pred             eCCCCc
Confidence            998765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=97.72  E-value=5.2e-05  Score=57.78  Aligned_cols=72  Identities=17%  Similarity=0.162  Sum_probs=50.0

Q ss_pred             cccccccccCCCeeeecccc---cc--eEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDD---GL--LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d---~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+....|+|+|++++..+.+   +.  +.+|+++++.              . ..+..+.. +.+++|||||+.|+.++.
T Consensus        60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------------~-~~l~~~~~-~~~~~wspdg~~l~~~~~  123 (347)
T 2gop_A           60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------------S-KKILEAKN-IRSLEWNEDSRKLLIVGF  123 (347)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------------E-EEEEEESE-EEEEEECTTSSEEEEEEE
T ss_pred             cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------------e-EEEEcCCC-ccceeECCCCCEEEEEEc
Confidence            35567899999999887654   34  5555555543              1 22233333 899999999999988874


Q ss_pred             C---------------------------CcEEEEeecCCC
Q psy14043        181 T---------------------------GLIIVWMLYKEK  193 (205)
Q Consensus       181 d---------------------------~~i~~wd~~~~~  193 (205)
                      +                           ..|.+||+.+++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~  163 (347)
T 2gop_A          124 KRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE  163 (347)
T ss_dssp             CCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred             cCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence            3                           568899987764

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=97.66  E-value=8.9e-05  Score=58.10  Aligned_cols=55  Identities=11%  Similarity=0.020  Sum_probs=45.8

Q ss_pred             eeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        119 IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       119 lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      ++.+..||.+.+|++.+..              .    ..+...|.+++|||+|  ++.|..||+|++|+...+.
T Consensus       139 ~av~~~dG~L~v~dl~~~~--------------~----~~~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~  193 (388)
T 1xip_A          139 LVILNSVNDLSALDLRTKS--------------T----KQLAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGE  193 (388)
T ss_dssp             EEEEETTSEEEEEETTTCC--------------E----EEEEESEEEEEECSSE--EEEEETTSCEEEEEEETTE
T ss_pred             EEEEECCCCEEEEEccCCc--------------c----ccccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcc
Confidence            7888899999999998765              1    1266789999999999  6789999999999887654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=97.64  E-value=3.4e-05  Score=59.70  Aligned_cols=72  Identities=10%  Similarity=0.112  Sum_probs=51.8

Q ss_pred             ccccc-cccCCCeeeeccccc------ceEEEEec-CCCCcchhhhhhcccceece---ecccceeeEEEEEEcC---CC
Q psy14043        107 VNCLA-WHQNQGWIAVGGDDG------LLKVLKLD-TGKESTGQVAAANVNLAMNQ---SLQGHSGKVRAIIWNE---QY  172 (205)
Q Consensus       107 ~~~~~-~~~~~~~lasg~~d~------~i~iw~~~-~~~~~~~~~~~~~~~~~~~~---~~~gh~~~v~~~~~s~---~~  172 (205)
                      ...++ |+|+++++++++.+.      .+++|+++ ++.              +..   ....+......++|+|   ||
T Consensus       256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~--------------~~~~~~~~~~~~~~~~~~a~sp~~~dg  321 (365)
T 1jof_A          256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS--------------IEKQLFLSPTPTSGGHSNAVSPCPWSD  321 (365)
T ss_dssp             EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC--------------EEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred             cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC--------------EEEeeeeeecCCCCcccceecCCCcCC
Confidence            56688 999999887765432      89999997 332              111   1222344456789999   89


Q ss_pred             CEEEeecCC-CcEEEEeecCC
Q psy14043        173 EKLTSSDET-GLIIVWMLYKE  192 (205)
Q Consensus       173 ~~las~~~d-~~i~~wd~~~~  192 (205)
                      ++|++++.+ ++|.+|++..+
T Consensus       322 ~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          322 EWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TEEEEECSSSCEEEEEEEETT
T ss_pred             CEEEEEEcCCCeEEEEEEchh
Confidence            999999875 89999998765

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=97.59  E-value=0.0002  Score=53.46  Aligned_cols=72  Identities=8%  Similarity=-0.170  Sum_probs=58.1

Q ss_pred             cccccccccCCC-eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        106 KVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       106 ~~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ....+.|+++++ .+.++..++.+..|+.+++.                ..+..+...+.+++++++|+.+++...++.|
T Consensus        29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~----------------~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i   92 (296)
T 3e5z_A           29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQL----------------SPEMHPSHHQNGHCLNKQGHLIACSHGLRRL   92 (296)
T ss_dssp             SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCE----------------EEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred             cccCCeEeCCCCEEEEEeCCCCEEEEEECCCCe----------------EEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence            346788999998 77888888999999987652                2334466778999999999999988888999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      .+||..+++
T Consensus        93 ~~~d~~~g~  101 (296)
T 3e5z_A           93 ERQREPGGE  101 (296)
T ss_dssp             EEECSTTCC
T ss_pred             EEEcCCCCc
Confidence            999987665

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=97.52  E-value=0.00036  Score=52.88  Aligned_cols=75  Identities=11%  Similarity=0.086  Sum_probs=58.0

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC----
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET----  181 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d----  181 (205)
                      ....+.|+++++.++++..++.|.+|+.+++.              .......+...+.+++++++|+.+++...+    
T Consensus        46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~  111 (333)
T 2dg1_A           46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------------IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKST  111 (333)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------------EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSC
T ss_pred             cccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------------EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCC
Confidence            45677899999988888888999999987765              212222455779999999999988888777    


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      +.|.+||..++..
T Consensus       112 ~~i~~~d~~~~~~  124 (333)
T 2dg1_A          112 GGIFAATENGDNL  124 (333)
T ss_dssp             CEEEEECTTSCSC
T ss_pred             ceEEEEeCCCCEE
Confidence            7899999876653

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=97.42  E-value=0.00028  Score=55.31  Aligned_cols=69  Identities=13%  Similarity=0.073  Sum_probs=55.3

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      +..++|  ++++++++ .++.+++||+.+...              ..+...|...|.++.+.+..  +|.++.||++.+
T Consensus        90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~--------------~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v  150 (388)
T 1xip_A           90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSE--------------FRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSA  150 (388)
T ss_dssp             EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC--------------EEEEEECSSCEEEEEECSSE--EEEEETTSEEEE
T ss_pred             eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc--------------cCccceeecceeeEEecCCC--EEEEECCCCEEE
Confidence            788889  99999999 889999999987652              23445666778888877643  899999999999


Q ss_pred             EeecCCCC
Q psy14043        187 WMLYKEKN  194 (205)
Q Consensus       187 wd~~~~~~  194 (205)
                      ||+.++..
T Consensus       151 ~dl~~~~~  158 (388)
T 1xip_A          151 LDLRTKST  158 (388)
T ss_dssp             EETTTCCE
T ss_pred             EEccCCcc
Confidence            99987653

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=97.34  E-value=0.00062  Score=50.38  Aligned_cols=70  Identities=6%  Similarity=0.075  Sum_probs=50.8

Q ss_pred             cccccccccCCCeeeeccccc-ceEEEEecCCCCcchhhhhhcccceeceecccc--eeeEEEEEEcCCCCEEEeecCCC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDG-LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH--SGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh--~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      ....++++++++.+++...++ .|.+|+.+..               ....+..+  ...+.+++++|+|+.+++ +.|+
T Consensus       208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~---------------~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~  271 (286)
T 1q7f_A          208 YPIGVGINSNGEILIADNHNNFNLTIFTQDGQ---------------LISALESKVKHAQCFDVALMDDGSVVLA-SKDY  271 (286)
T ss_dssp             SEEEEEECTTCCEEEEECSSSCEEEEECTTSC---------------EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTT
T ss_pred             CCcEEEECCCCCEEEEeCCCCEEEEEECCCCC---------------EEEEEcccCCCCcceeEEECCCCcEEEE-CCCC
Confidence            345678889998888887775 9999985432               22233332  234789999999998887 5799


Q ss_pred             cEEEEeecC
Q psy14043        183 LIIVWMLYK  191 (205)
Q Consensus       183 ~i~~wd~~~  191 (205)
                      +|++|+...
T Consensus       272 ~v~v~~~~~  280 (286)
T 1q7f_A          272 RLYIYRYVQ  280 (286)
T ss_dssp             EEEEEECSC
T ss_pred             eEEEEEccc
Confidence            999998754

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=97.34  E-value=0.00036  Score=58.69  Aligned_cols=75  Identities=8%  Similarity=-0.093  Sum_probs=54.8

Q ss_pred             cccccccCCCeeeecccccc-------------eEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCE
Q psy14043        108 NCLAWHQNQGWIAVGGDDGL-------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK  174 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~-------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~  174 (205)
                      ..+.|+|+++.++.++.|..             +++|++.++....          .+.....+|...+.+++|||||++
T Consensus       171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~----------~lv~~~~~~~~~~~~~~~SpDG~~  240 (695)
T 2bkl_A          171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD----------TVVHERTGDPTTFLQSDLSRDGKY  240 (695)
T ss_dssp             CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC----------EEEECCCCCTTCEEEEEECTTSCC
T ss_pred             cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc----------eEEEecCCCCEEEEEEEECCCCCE
Confidence            56789999999999887765             8999988765211          122334456677889999999999


Q ss_pred             EEeecCCC----cEEEEeecCC
Q psy14043        175 LTSSDETG----LIIVWMLYKE  192 (205)
Q Consensus       175 las~~~d~----~i~~wd~~~~  192 (205)
                      |+.++.++    .|.+||..++
T Consensus       241 l~~~~~~~~~~~~l~~~~~~~~  262 (695)
T 2bkl_A          241 LFVYILRGWSENDVYWKRPGEK  262 (695)
T ss_dssp             EEEEEEETTTEEEEEEECTTCS
T ss_pred             EEEEEeCCCCceEEEEEcCCCC
Confidence            98888766    5666665443

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=97.33  E-value=0.00046  Score=58.17  Aligned_cols=75  Identities=11%  Similarity=0.081  Sum_probs=54.9

Q ss_pred             ccccccccCCCeeeecccccc----------------eEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGL----------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE  170 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~----------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~  170 (205)
                      +..+.|+||++.++.++.++.                |.+|++.++...+          .+......|...+.+++|||
T Consensus       173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~----------~~v~~~~~~~~~~~~~~~Sp  242 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED----------ILCAEFPDEPKWMGGAELSD  242 (710)
T ss_dssp             SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC----------EEEECCTTCTTCEEEEEECT
T ss_pred             cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc----------eEEeccCCCCeEEEEEEEcC
Confidence            456889999999998877765                8888887654111          01122234566678999999


Q ss_pred             CCCEEEeecC-----CCcEEEEeecC
Q psy14043        171 QYEKLTSSDE-----TGLIIVWMLYK  191 (205)
Q Consensus       171 ~~~~las~~~-----d~~i~~wd~~~  191 (205)
                      ||++|+.++.     +..|.+||+.+
T Consensus       243 Dg~~l~~~~~~~~~~~~~l~~~d~~~  268 (710)
T 2xdw_A          243 DGRYVLLSIREGCDPVNRLWYCDLQQ  268 (710)
T ss_dssp             TSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred             CCCEEEEEEEccCCCccEEEEEECcc
Confidence            9999887764     67899999976

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=97.31  E-value=0.00012  Score=56.72  Aligned_cols=72  Identities=7%  Similarity=-0.081  Sum_probs=52.7

Q ss_pred             ccccccCCCeeeecc----------cccceEEEEecCCCCcchhhhhhcccceeceeccc------ceeeEEEEEEcCCC
Q psy14043        109 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG------HSGKVRAIIWNEQY  172 (205)
Q Consensus       109 ~~~~~~~~~~lasg~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~g------h~~~v~~~~~s~~~  172 (205)
                      .++++|+++++.+++          .++.+.+||..+..              ...++..      +......++++|||
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------------~~~~i~~~~~~~~~g~~p~~i~~spdg  119 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--------------FEKEISLPPKRVQGLNYDGLFRQTTDG  119 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------------EEEEEEECTTBCCBCCCGGGEEECTTS
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--------------EEEEEEcCccccccCCCcceEEECCCC
Confidence            788999999888875          36789999987765              2222211      12334569999999


Q ss_pred             CEEEeecC--CCcEEEEeecCCCC
Q psy14043        173 EKLTSSDE--TGLIIVWMLYKEKN  194 (205)
Q Consensus       173 ~~las~~~--d~~i~~wd~~~~~~  194 (205)
                      ++|..++.  +++|.+||+.+++.
T Consensus       120 ~~l~v~n~~~~~~v~v~d~~~~~~  143 (361)
T 2oiz_A          120 KFIVLQNASPATSIGIVDVAKGDY  143 (361)
T ss_dssp             SEEEEEEESSSEEEEEEETTTTEE
T ss_pred             CEEEEECCCCCCeEEEEECCCCcE
Confidence            99988864  68999999987643

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=97.18  E-value=0.0014  Score=50.51  Aligned_cols=72  Identities=15%  Similarity=-0.075  Sum_probs=52.6

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEE--EcCCCCEEEe--------
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII--WNEQYEKLTS--------  177 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~--~s~~~~~las--------  177 (205)
                      ....|+|+++.++..+.++.+.+|++.++.              .......+...+....  ++|+++.++.        
T Consensus        84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~--------------~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~  149 (388)
T 3pe7_A           84 FGGFLSPDDDALFYVKDGRNLMRVDLATLE--------------ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDW  149 (388)
T ss_dssp             SSCEECTTSSEEEEEETTTEEEEEETTTCC--------------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred             cceEEcCCCCEEEEEeCCCeEEEEECCCCc--------------ceeeeechhhcccccceeECCCCCeeccccccCccc
Confidence            356899999999999988999999999876              2222334444443333  4899999873        


Q ss_pred             --------------ecCCCcEEEEeecCCC
Q psy14043        178 --------------SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 --------------~~~d~~i~~wd~~~~~  193 (205)
                                    .+.+..|.+||+.+++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~  179 (388)
T 3pe7_A          150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGE  179 (388)
T ss_dssp             CCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred             ccccccchhhhhhccCCcceEEEEECCCCc
Confidence                          3456789999988764

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=97.09  E-value=0.0018  Score=49.21  Aligned_cols=73  Identities=8%  Similarity=0.009  Sum_probs=55.9

Q ss_pred             cccccccccCCCeeeecccc------------------------cceEEEEecCCCCcchhhhhhcccceeceec-ccce
Q psy14043        106 KVNCLAWHQNQGWIAVGGDD------------------------GLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHS  160 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d------------------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~gh~  160 (205)
                      .+..++++++++.+++.+.+                        +.+.+||.+++.              +...+ .++-
T Consensus        25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~   90 (329)
T 3fvz_A           25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--------------ILQSSGKNLF   90 (329)
T ss_dssp             CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--------------EEEEECTTTC
T ss_pred             CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--------------EEeccCCCcc
Confidence            56788899999988887766                        357777776665              22222 2455


Q ss_pred             eeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        161 GKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       161 ~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                      .....++++++|+.+++...++.|++||....
T Consensus        91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~  122 (329)
T 3fvz_A           91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSK  122 (329)
T ss_dssp             SSEEEEEECTTSCEEEEETTTTEEEEECTTCS
T ss_pred             CCceEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence            57889999999999999999999999997544

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=97.06  E-value=0.001  Score=50.34  Aligned_cols=71  Identities=7%  Similarity=-0.019  Sum_probs=56.5

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .+..+.|++++..++..+.++.++.|.   ..              ....+.++...+.+++|+++|+.++++..++.|.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~   69 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTIT---AE--------------PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIF   69 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEEE---CE--------------EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEE
T ss_pred             ccceeeecCCccceeEEeecccCcccc---cc--------------eeEEEeccCccccCcEECCCCCEEEEECCCCEEE
Confidence            467788999988888878889999992   22              2244556666779999999999888999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      +||..+++
T Consensus        70 ~~d~~~~~   77 (333)
T 2dg1_A           70 KINPETKE   77 (333)
T ss_dssp             EECTTTCC
T ss_pred             EEeCCCCc
Confidence            99987765

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.04  E-value=0.00068  Score=55.86  Aligned_cols=87  Identities=14%  Similarity=0.016  Sum_probs=49.3

Q ss_pred             CCCeEEEEecCCCC-------CcchhHHHHHHHHHHHHcCCCCCCCCCH------------HH-HHHHHHhCCCCCCCCc
Q psy14043          2 NGAVLKLIDLGSSA-------GPSTDMWSLGVLLYILLSGVSPFLDESE------------EE-TRAHISVADYSFPPEQ   61 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~-------~~~~DvwslG~~~~~ll~g~~pf~~~~~------------~~-~~~~i~~~~~~~~~~~   61 (205)
                      ++|.+||+|||+|.       ...+++++.|.+..|++.|+.++.....            .. ....+.    ..+.  
T Consensus       374 ~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~~~~l~----~~~~--  447 (569)
T 4azs_A          374 ARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNWLYAVW----QEPV--  447 (569)
T ss_dssp             TTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHHHHHHH----TSCG--
T ss_pred             CCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchhHHHhh----cCCC--
Confidence            47899999999984       4557889999999999988766532110            00 111111    1111  


Q ss_pred             CCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         62 CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        62 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                         .......+...+...+|..|+.......++|..
T Consensus       448 ---~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  480 (569)
T 4azs_A          448 ---ERWNFVLLLALFEKKAKLPSAEQQRGATEQWII  480 (569)
T ss_dssp             ---GGCSHHHHHHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred             ---CCCcHHHHHHHHhCCCCCCCCChhhhccchhHH
Confidence               111245666677778888888777777777653

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=96.97  E-value=0.0017  Score=49.33  Aligned_cols=63  Identities=13%  Similarity=0.061  Sum_probs=47.9

Q ss_pred             CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec---ccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecC
Q psy14043        115 NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL---QGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK  191 (205)
Q Consensus       115 ~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~---~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~  191 (205)
                      +++..++...+..+++|+..++.              +..++   .+|.....+++++|+|..+++...+++|++|++..
T Consensus       257 ~g~~~v~~~~~~~v~~~~~~~g~--------------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          257 NGKPYFGDQEPVQGFVMNFSSGE--------------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             ECCCCTTCSCCCCEEEEETTTCC--------------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             CCCEEeccCCCcEEEEEEcCCCe--------------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            44444444555688899988775              33443   46777789999999999999999999999999864

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=96.96  E-value=0.001  Score=56.43  Aligned_cols=72  Identities=15%  Similarity=0.122  Sum_probs=51.6

Q ss_pred             cccccccccCCCeeeecccc-----cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDD-----GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+...+|+|+|+++|.++.+     ..|++||++++..              . ....+...+.+++|||| +.|+.++.
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--------------~-~~~~~~~~~~~~~wspD-~~l~~~~~  227 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--------------L-ADELKWVKFSGLAWLGN-DALLYSRF  227 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--------------E-EEEEEEEESCCCEESTT-SEEEEEEC
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--------------C-CccCCCceeccEEEECC-CEEEEEEe
Confidence            34567899999999887654     5699999998761              1 11112223367999999 99998887


Q ss_pred             CCc--------------EEEEeecCCC
Q psy14043        181 TGL--------------IIVWMLYKEK  193 (205)
Q Consensus       181 d~~--------------i~~wd~~~~~  193 (205)
                      |+.              |.+|++.++.
T Consensus       228 ~~~~~~~~~~~~~~~~~v~~~~lgt~~  254 (741)
T 1yr2_A          228 AEPKEGQAFQALNYNQTVWLHRLGTPQ  254 (741)
T ss_dssp             CCC--------CCCCCEEEEEETTSCG
T ss_pred             cCcccccccccCCCCCEEEEEECCCCc
Confidence            765              8899986654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.95  E-value=0.0016  Score=50.19  Aligned_cols=71  Identities=6%  Similarity=-0.033  Sum_probs=48.7

Q ss_pred             ccccccccCCCeeeecccc-----cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcC-CCCEEEeec-
Q psy14043        107 VNCLAWHQNQGWIAVGGDD-----GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD-  179 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~-~~~~las~~-  179 (205)
                      +..+.|+|+++.++..+.+     +.+.+||+.++...            ....+.++    . ++|+| ||+.+++++ 
T Consensus       240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~------------~l~~~~~~----~-~~~s~~dg~~l~~~~~  302 (396)
T 3c5m_A          240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE------------EVMVMPPC----S-HLMSNFDGSLMVGDGC  302 (396)
T ss_dssp             EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE------------EEEECCSE----E-EEEECSSSSEEEEEEC
T ss_pred             ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE------------EeeeCCCC----C-CCccCCCCceEEEecC
Confidence            4557899999988776544     45899998776411            11112222    2 88999 999988765 


Q ss_pred             ---------------CCCcEEEEeecCCCC
Q psy14043        180 ---------------ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ---------------~d~~i~~wd~~~~~~  194 (205)
                                     .+..|.+||+.++..
T Consensus       303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~  332 (396)
T 3c5m_A          303 DAPVDVADADSYNIENDPFLYVLNTKAKSA  332 (396)
T ss_dssp             CC----------CCCCCCEEEEEETTTTBC
T ss_pred             CcceeeccccccccCCCCcEEEEecccCce
Confidence                           347899999877653

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=96.90  E-value=0.0058  Score=50.34  Aligned_cols=64  Identities=14%  Similarity=0.129  Sum_probs=49.7

Q ss_pred             cccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeec
Q psy14043        112 WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY  190 (205)
Q Consensus       112 ~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~  190 (205)
                      .++.+..+++...++.+.++|.++..              +..++.. ...+..+++||||++|..++.|+.|.+||+.
T Consensus       163 ~d~~~~~~V~~~~~~~V~viD~~t~~--------------v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~  226 (567)
T 1qks_A          163 WDLENLFSVTLRDAGQIALIDGSTYE--------------IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLW  226 (567)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTCC--------------EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred             cCCCceEEEEeCCCCeEEEEECCCCe--------------EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence            33555677777889999999999876              3344432 2245689999999999999999999999985

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=96.88  E-value=0.0014  Score=48.76  Aligned_cols=61  Identities=11%  Similarity=-0.025  Sum_probs=47.6

Q ss_pred             CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccce-eeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        115 NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS-GKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       115 ~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                      .++.+++++.++.+.+||.++++              ...++..|. ..+.+++++|+|+.|++  .++.|..||. ++
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~--------------~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G   65 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKE--------------IVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DG   65 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTE--------------EEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TS
T ss_pred             CCcEEEeeCCCCEEEEEECCCCe--------------EEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CC
Confidence            46788999999999999998886              445555554 46788999999999994  4677887776 44

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=96.88  E-value=0.0043  Score=46.25  Aligned_cols=75  Identities=8%  Similarity=0.163  Sum_probs=53.8

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeecCCCcEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDETGLII  185 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~~d~~i~  185 (205)
                      ...+.++++++..++...++.|.+|+.+++.              ....+..+...+.+++++++|+ .+++...++.|.
T Consensus       228 p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~  293 (314)
T 1pjx_A          228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW  293 (314)
T ss_dssp             EEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             CCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence            3456677888877776667788888877544              2234445557789999999998 556666788999


Q ss_pred             EEeecCCCCC
Q psy14043        186 VWMLYKEKNP  195 (205)
Q Consensus       186 ~wd~~~~~~~  195 (205)
                      ++|+.....+
T Consensus       294 ~~~~~~~g~~  303 (314)
T 1pjx_A          294 KFEWQRNGKK  303 (314)
T ss_dssp             EEECSSCBCC
T ss_pred             EEeCCCCCcc
Confidence            9998764443

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=96.87  E-value=0.004  Score=46.26  Aligned_cols=70  Identities=13%  Similarity=-0.014  Sum_probs=48.9

Q ss_pred             ccccccccCCCeeee----cccc-----------cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC
Q psy14043        107 VNCLAWHQNQGWIAV----GGDD-----------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ  171 (205)
Q Consensus       107 ~~~~~~~~~~~~las----g~~d-----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~  171 (205)
                      .+.+.++++|+.+++    |+.+           +.-.+|.++...              ....+.++.....+++|+||
T Consensus       117 ~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g--------------~~~~~~~~~~~~~gi~~s~d  182 (296)
T 3e5z_A          117 PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG--------------TLSAPIRDRVKPNGLAFLPS  182 (296)
T ss_dssp             CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS--------------CEEEEECCCSSEEEEEECTT
T ss_pred             CCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC--------------CEEEeecCCCCCccEEECCC
Confidence            456888999998887    3211           123566665432              11233445556788999999


Q ss_pred             CCEEEeecCCCcEEEEeec
Q psy14043        172 YEKLTSSDETGLIIVWMLY  190 (205)
Q Consensus       172 ~~~las~~~d~~i~~wd~~  190 (205)
                      |+.|++.+.++.|.+||+.
T Consensus       183 g~~lv~~~~~~~i~~~~~~  201 (296)
T 3e5z_A          183 GNLLVSDTGDNATHRYCLN  201 (296)
T ss_dssp             SCEEEEETTTTEEEEEEEC
T ss_pred             CCEEEEeCCCCeEEEEEEC
Confidence            9999888889999999986

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=96.87  E-value=0.0015  Score=55.09  Aligned_cols=70  Identities=16%  Similarity=0.221  Sum_probs=51.9

Q ss_pred             cccccccccCCCeee-----ecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeE--EEEEEcCCCCEEEee
Q psy14043        106 KVNCLAWHQNQGWIA-----VGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV--RAIIWNEQYEKLTSS  178 (205)
Q Consensus       106 ~~~~~~~~~~~~~la-----sg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v--~~~~~s~~~~~las~  178 (205)
                      .+....|+|+++++|     .|+....|+++|++++..                 +..+...+  .+++|+ ||+.|+.+
T Consensus       130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~-----------------~~~~~~~~k~~~~~Ws-Dg~~l~y~  191 (693)
T 3iuj_A          130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP-----------------LETPLKDVKFSGISWL-GNEGFFYS  191 (693)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE-----------------EEEEEEEEESCCCEEE-TTTEEEEE
T ss_pred             EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC-----------------CccccCCceeccEEEe-CCCEEEEE
Confidence            355668999999998     455567899999998861                 11122223  578999 99999999


Q ss_pred             cCCCc-------------EEEEeecCCC
Q psy14043        179 DETGL-------------IIVWMLYKEK  193 (205)
Q Consensus       179 ~~d~~-------------i~~wd~~~~~  193 (205)
                      +.|+.             |++|++.++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~  219 (693)
T 3iuj_A          192 SYDKPDGSELSARTDQHKVYFHRLGTAQ  219 (693)
T ss_dssp             ESSCCC-------CCCCEEEEEETTSCG
T ss_pred             EecCcccccccccCCCcEEEEEECCCCc
Confidence            88854             9999987654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=96.79  E-value=0.0042  Score=45.82  Aligned_cols=70  Identities=11%  Similarity=0.083  Sum_probs=53.6

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec--ccceeeEEEEEEcCCCCEEEeecCCC-
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL--QGHSGKVRAIIWNEQYEKLTSSDETG-  182 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~gh~~~v~~~~~s~~~~~las~~~d~-  182 (205)
                      ....++++++++.+++...++.|++|+.+...               ..++  .++.....+++++++|+.+++...++ 
T Consensus       165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~---------------~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~  229 (286)
T 1q7f_A          165 FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY---------------LRQIGGEGITNYPIGVGINSNGEILIADNHNNF  229 (286)
T ss_dssp             SEEEEEECSSSEEEEEEGGGTEEEEEETTCCE---------------EEEESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred             CcEEEEECCCCCEEEEECCCCEEEEEcCCCCE---------------EEEEccCCccCCCcEEEECCCCCEEEEeCCCCE
Confidence            35678899999988888888999999975321               1223  23345678999999999999998886 


Q ss_pred             cEEEEeec
Q psy14043        183 LIIVWMLY  190 (205)
Q Consensus       183 ~i~~wd~~  190 (205)
                      .|.+||..
T Consensus       230 ~i~~~~~~  237 (286)
T 1q7f_A          230 NLTIFTQD  237 (286)
T ss_dssp             EEEEECTT
T ss_pred             EEEEECCC
Confidence            99999953

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=96.74  E-value=0.0043  Score=45.23  Aligned_cols=75  Identities=4%  Similarity=-0.097  Sum_probs=55.2

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ....+.+++++...++...++.+.+|+.++..              .......+-..+.+++++++|+.+++...+++|+
T Consensus       193 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~--------------~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~  258 (270)
T 1rwi_B          193 APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT--------------STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  258 (270)
T ss_dssp             SEEEEEECTTCCEEEEETTTSCEEEECTTCSC--------------CEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred             CceEEEECCCCCEEEEECCCCcEEEEcCCCCc--------------ceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence            34567788888777777778889898876543              1111123335678999999999999999999999


Q ss_pred             EEeecCCCC
Q psy14043        186 VWMLYKEKN  194 (205)
Q Consensus       186 ~wd~~~~~~  194 (205)
                      +++....+.
T Consensus       259 ~~~~~~~~~  267 (270)
T 1rwi_B          259 KLTSLEHHH  267 (270)
T ss_dssp             EECCCGGGS
T ss_pred             EEcCCCccc
Confidence            999876543

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=96.64  E-value=0.0048  Score=52.28  Aligned_cols=74  Identities=11%  Similarity=0.016  Sum_probs=50.9

Q ss_pred             cccccccCCCeeeecccccc--------------eEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC
Q psy14043        108 NCLAWHQNQGWIAVGGDDGL--------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE  173 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~--------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~  173 (205)
                      ..+.|+|+ +.++.++.++.              +.+|++.++...+          .+.....+|...+.++.|||||+
T Consensus       212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----------~lv~~~~~~~~~~~~~~~SpDG~  280 (741)
T 1yr2_A          212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----------QPVFATPELPKRGHGASVSSDGR  280 (741)
T ss_dssp             CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC----------EEEECCTTCTTCEEEEEECTTSC
T ss_pred             ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----------EEEeccCCCCeEEEEEEECCCCC
Confidence            46789999 88888776554              6777776553111          01222234444578999999999


Q ss_pred             EEEeecCCC-----cEEEEeecCC
Q psy14043        174 KLTSSDETG-----LIIVWMLYKE  192 (205)
Q Consensus       174 ~las~~~d~-----~i~~wd~~~~  192 (205)
                      +|+..+.++     .|.+||+.++
T Consensus       281 ~l~~~~~~~~~~~~~l~~~d~~~~  304 (741)
T 1yr2_A          281 WVVITSSEGTDPVNTVHVARVTNG  304 (741)
T ss_dssp             EEEEEEECTTCSCCEEEEEEEETT
T ss_pred             EEEEEEEccCCCcceEEEEECCCC
Confidence            988877554     8999999776

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=96.58  E-value=0.0065  Score=50.05  Aligned_cols=72  Identities=13%  Similarity=0.031  Sum_probs=53.3

Q ss_pred             ccccccccCCCeeeecccccceEEEEec--CCCCcchhhhhhcccceeceecccceeeEEEEEEc----CCCCEEEeecC
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLD--TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN----EQYEKLTSSDE  180 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s----~~~~~las~~~  180 (205)
                      ...+.++|+++++.+++.++.+.+||+.  +..              ...++.... .-..++||    |||+++..++.
T Consensus       199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~--------------~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~  263 (567)
T 1qks_A          199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT--------------TVAEIKIGS-EARSIETSKMEGWEDKYAIAGAY  263 (567)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCC--------------EEEEEECCS-EEEEEEECCSTTCTTTEEEEEEE
T ss_pred             ccceEECCCCCEEEEEcCCCeEEEEECCCCCCc--------------EeEEEecCC-CCceeEEccccCCCCCEEEEEEc
Confidence            4577899999999999899999999996  443              223333222 24689999    69998777765


Q ss_pred             -CCcEEEEeecCCC
Q psy14043        181 -TGLIIVWMLYKEK  193 (205)
Q Consensus       181 -d~~i~~wd~~~~~  193 (205)
                       +++|.|+|..+.+
T Consensus       264 ~~~~v~ViD~~t~~  277 (567)
T 1qks_A          264 WPPQYVIMDGETLE  277 (567)
T ss_dssp             ETTEEEEEETTTCC
T ss_pred             cCCeEEEEECCCCc
Confidence             6899999976643

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=96.31  E-value=0.011  Score=45.97  Aligned_cols=71  Identities=11%  Similarity=0.036  Sum_probs=48.8

Q ss_pred             cccccCCCeeeeccc----------ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEee
Q psy14043        110 LAWHQNQGWIAVGGD----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSS  178 (205)
Q Consensus       110 ~~~~~~~~~lasg~~----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~  178 (205)
                      +.++++++.+.....          .+.|.+.|..+..              ...++.. .....+++|+|||+ +|.++
T Consensus       272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~--------------vv~~i~~-g~~p~~i~~s~Dg~~~l~v~  336 (373)
T 2mad_H          272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ--------------TSSQISL-GHDVDAISVAQDGGPDLYAL  336 (373)
T ss_pred             EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE--------------EEEEEEC-CCCcCeEEECCCCCeEEEEE
Confidence            556777765554322          3467777877765              3333321 12468999999999 78888


Q ss_pred             c-CCCcEEEEeecCCCCC
Q psy14043        179 D-ETGLIIVWMLYKEKNP  195 (205)
Q Consensus       179 ~-~d~~i~~wd~~~~~~~  195 (205)
                      . .+++|.|+|+.+++..
T Consensus       337 ~~~~~~V~ViD~~t~~vv  354 (373)
T 2mad_H          337 SAGTEVLHIYDAGAGDQD  354 (373)
T ss_pred             cCCCCeEEEEECCCCCEE
Confidence            7 5999999999887643

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=96.29  E-value=0.017  Score=41.94  Aligned_cols=74  Identities=8%  Similarity=-0.005  Sum_probs=54.1

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ....+.++++++..++...++.+.+|+.++..              .......+.....+++++++|..+++...++.|.
T Consensus       151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~  216 (270)
T 1rwi_B          151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN--------------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVV  216 (270)
T ss_dssp             SCCCEEECTTCCEEEEEGGGTEEEEECTTTCC--------------EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred             CceeEEEeCCCCEEEEECCCCEEEEEecCCCc--------------eEeecccCCCCceEEEECCCCCEEEEECCCCcEE
Confidence            35667788888877777677889999877654              1111122335678899999998888888899999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      +||.....
T Consensus       217 ~~~~~~~~  224 (270)
T 1rwi_B          217 KLLAGSTT  224 (270)
T ss_dssp             EECTTCSC
T ss_pred             EEcCCCCc
Confidence            99986543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=96.18  E-value=0.01  Score=44.86  Aligned_cols=64  Identities=14%  Similarity=0.072  Sum_probs=44.2

Q ss_pred             cccCCCeeeeccccc------ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEE-EEEcCCCCEEEeecCCCcE
Q psy14043        112 WHQNQGWIAVGGDDG------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRA-IIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       112 ~~~~~~~lasg~~d~------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~-~~~s~~~~~las~~~d~~i  184 (205)
                      ++|+|+.++..+.+.      ..++|.++++.              ......+|...+.. ++|+ |+ .+++++.|+.+
T Consensus       222 ~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~--------------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~  285 (347)
T 2gop_A          222 VDSDGERILLYGKPEKKYMSEHNKLYIYDGKE--------------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV  285 (347)
T ss_dssp             EEECSSCEEEEECCSSSCCCSSCEEEEECSSC--------------EEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred             ECCCCCEEEEEEccccCCccccceEEEECCCc--------------eEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence            388999887766443      23444444332              22333566778886 9999 88 99999999999


Q ss_pred             EEEeecCC
Q psy14043        185 IVWMLYKE  192 (205)
Q Consensus       185 ~~wd~~~~  192 (205)
                      ++| +.++
T Consensus       286 ~l~-~~~g  292 (347)
T 2gop_A          286 NLY-IWDG  292 (347)
T ss_dssp             EEE-EESS
T ss_pred             EEE-EcCC
Confidence            999 8743

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=96.11  E-value=0.034  Score=41.41  Aligned_cols=79  Identities=14%  Similarity=0.105  Sum_probs=55.0

Q ss_pred             ccccccccCCCee-eecccccceEEEEec--CCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCc
Q psy14043        107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLD--TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL  183 (205)
Q Consensus       107 ~~~~~~~~~~~~l-asg~~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~  183 (205)
                      .+.++|+|+++.+ .+.+.++.|..|+++  ++..         .+-+....+..+......+++.++|+..++...++.
T Consensus       151 pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~---------~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~  221 (297)
T 3g4e_A          151 SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI---------SNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR  221 (297)
T ss_dssp             EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE---------EEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred             ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc---------cCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE
Confidence            3567899999765 555667889999885  3320         000122233444566788999999999888888899


Q ss_pred             EEEEeecCCCC
Q psy14043        184 IIVWMLYKEKN  194 (205)
Q Consensus       184 i~~wd~~~~~~  194 (205)
                      |.+||..+++.
T Consensus       222 v~~~d~~tG~~  232 (297)
T 3g4e_A          222 VIRLDPVTGKR  232 (297)
T ss_dssp             EEEECTTTCCE
T ss_pred             EEEEcCCCceE
Confidence            99999887653

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=96.10  E-value=0.0029  Score=49.12  Aligned_cols=63  Identities=14%  Similarity=0.137  Sum_probs=40.1

Q ss_pred             CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        115 NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       115 ~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      ++..+.+++.|+.+..||..+++              ..-++..  +.+.+..+..+++.+++++.|+.|..||..+++
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~--------------~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~   70 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGS--------------IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNE   70 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCC--------------EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----C
T ss_pred             eCCEEEEEcCCCEEEEEECCCCC--------------EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCc
Confidence            46788889999999999999887              3233333  334445556678888888999999999998765

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=96.02  E-value=0.026  Score=42.79  Aligned_cols=73  Identities=10%  Similarity=0.016  Sum_probs=51.5

Q ss_pred             ccccccccCCCeeeecccc----------cceEEEEecCCCCcchhhhhhcccceeceeccc-ceeeEEEEEEcCCCCEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDD----------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNEQYEKL  175 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~g-h~~~v~~~~~s~~~~~l  175 (205)
                      ...+.++++++.+++...+          +.+.++|..+..              +..++.- .......++++|++++|
T Consensus       174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--------------v~~~~~~~~g~~p~~la~~~d~~~l  239 (328)
T 3dsm_A          174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--------------VEKQFKFKLGDWPSEVQLNGTRDTL  239 (328)
T ss_dssp             BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--------------EEEEEECCTTCCCEEEEECTTSCEE
T ss_pred             ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--------------EEEEEecCCCCCceeEEEecCCCEE
Confidence            4567788888877776554          678888887664              2222221 11256889999999988


Q ss_pred             EeecCCCcEEEEeecCCCCC
Q psy14043        176 TSSDETGLIIVWMLYKEKNP  195 (205)
Q Consensus       176 as~~~d~~i~~wd~~~~~~~  195 (205)
                      ..+..  +|.+||+.+++..
T Consensus       240 yv~~~--~v~~~d~~t~~~~  257 (328)
T 3dsm_A          240 YWINN--DIWRMPVEADRVP  257 (328)
T ss_dssp             EEESS--SEEEEETTCSSCC
T ss_pred             EEEcc--EEEEEECCCCcee
Confidence            77765  8999999887653

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=95.96  E-value=0.022  Score=44.22  Aligned_cols=78  Identities=6%  Similarity=-0.175  Sum_probs=50.2

Q ss_pred             ccccccCCCeeeecc----------cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        109 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       109 ~~~~~~~~~~lasg~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      .+.++|+++++....          .++.+.++|..+...........+     .+...+  ..-..++|||||++|..+
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-----~~~~~g--~~p~~~~~spDG~~l~v~  142 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-----PRFDVG--PYSWMNANTPNNADLLFF  142 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-----cccccC--CCccceEECCCCCEEEEE
Confidence            788999999888775          367899999987542110000000     000001  122478999999999888


Q ss_pred             cC--CCcEEEEeecCCCC
Q psy14043        179 DE--TGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~--d~~i~~wd~~~~~~  194 (205)
                      +.  +++|.++| .+++.
T Consensus       143 n~~~~~~v~viD-~t~~~  159 (373)
T 2mad_H          143 QFAAGPAVGLVV-QGGSS  159 (373)
T ss_pred             ecCCCCeEEEEE-CCCCE
Confidence            74  57899999 87754

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=95.94  E-value=0.019  Score=44.58  Aligned_cols=70  Identities=11%  Similarity=0.070  Sum_probs=49.5

Q ss_pred             cccccCCCeeeeccc---------ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEeec
Q psy14043        110 LAWHQNQGWIAVGGD---------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSD  179 (205)
Q Consensus       110 ~~~~~~~~~lasg~~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~~  179 (205)
                      +.++++++.+..+..         ++.+.++|..+..              ...++.... ...+++|+|||+ .++++.
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------------vv~~i~vg~-~p~gi~~s~Dg~~l~va~~  333 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------------TSGPISNGH-DSDAIIAAQDGASDNYANS  333 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------------EEECCEEEE-EECEEEECCSSSCEEEEEE
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------------EEEEEECCC-CcceEEECCCCCEEEEEcc
Confidence            568888876665422         2345599998876              334443322 578999999997 466776


Q ss_pred             -CCCcEEEEeecCCCC
Q psy14043        180 -ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 -~d~~i~~wd~~~~~~  194 (205)
                       .+++|.|+|+.+.+.
T Consensus       334 ~~~~~VsVID~~t~kv  349 (368)
T 1mda_H          334 AGTEVLDIYDAASDQD  349 (368)
T ss_dssp             TTTTEEEEEESSSCEE
T ss_pred             CCCCeEEEEECCCCcE
Confidence             599999999988763

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=95.81  E-value=0.022  Score=42.23  Aligned_cols=70  Identities=7%  Similarity=0.086  Sum_probs=53.3

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEE
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW  187 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~w  187 (205)
                      ..++..++++++++...++.+..||.+ ++              ...++..+ ....++...++|..+++++.++.|..+
T Consensus       128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~--------------~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~  191 (276)
T 3no2_A          128 RQINKNKKGNYLVPLFATSEVREIAPN-GQ--------------LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQL  191 (276)
T ss_dssp             SCCEECTTSCEEEEETTTTEEEEECTT-SC--------------EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEE
T ss_pred             cCceECCCCCEEEEecCCCEEEEECCC-CC--------------EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEE
Confidence            345567889999999999999999987 55              33333332 234567788999999999999999999


Q ss_pred             eecCCC
Q psy14043        188 MLYKEK  193 (205)
Q Consensus       188 d~~~~~  193 (205)
                      |..+++
T Consensus       192 d~~tG~  197 (276)
T 3no2_A          192 NLESNR  197 (276)
T ss_dssp             CTTTCC
T ss_pred             eCcCCc
Confidence            988765

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=95.74  E-value=0.0067  Score=47.44  Aligned_cols=71  Identities=10%  Similarity=-0.080  Sum_probs=50.4

Q ss_pred             cccccCCCeeeecc----------cccceEEEEecCCCCcchhhhhhcccceeceecc-cc------eeeEEEEEEcCCC
Q psy14043        110 LAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GH------SGKVRAIIWNEQY  172 (205)
Q Consensus       110 ~~~~~~~~~lasg~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-gh------~~~v~~~~~s~~~  172 (205)
                      +.++|+++++..++          .++.+.+||..+..              ...++. +.      ...-..++++|||
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--------------v~~~I~v~~g~r~~~g~~P~~~a~spDG  148 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------------PTADIELPDAPRFLVGTYPWMTSLTPDG  148 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------------EEEEEEETTCCCCCBSCCGGGEEECTTS
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--------------EEEEEECCCccccccCCCCceEEEcCCC
Confidence            88999999876664          36789999998876              222221 00      0122458999999


Q ss_pred             CEEEeecC--CCcEEEEeecCCCC
Q psy14043        173 EKLTSSDE--TGLIIVWMLYKEKN  194 (205)
Q Consensus       173 ~~las~~~--d~~i~~wd~~~~~~  194 (205)
                      ++|..+..  +++|.++|+.+++.
T Consensus       149 k~lyVan~~~~~~VsVID~~t~~v  172 (386)
T 3sjl_D          149 KTLLFYQFSPAPAVGVVDLEGKAF  172 (386)
T ss_dssp             SEEEEEECSSSCEEEEEETTTTEE
T ss_pred             CEEEEEEcCCCCeEEEEECCCCcE
Confidence            99777753  78999999988764

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=95.61  E-value=0.03  Score=47.06  Aligned_cols=75  Identities=15%  Similarity=0.078  Sum_probs=50.3

Q ss_pred             cccccccCCCeeeecccccc-------------eEEEEecCCCCcchhhhhhcccceeceeccc-ceeeEEEEEEcCCCC
Q psy14043        108 NCLAWHQNQGWIAVGGDDGL-------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNEQYE  173 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~-------------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~g-h~~~v~~~~~s~~~~  173 (205)
                      ..+.|+ |++.++.++.+..             |.+|++.+....+          .+.....+ |...+.++.|||||+
T Consensus       178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----------~~v~~~~~~~~~~~~~~~~SpDg~  246 (693)
T 3iuj_A          178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDD----------RLVFGAIPAQHHRYVGATVTEDDR  246 (693)
T ss_dssp             CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGC----------EEEESCSGGGCCSEEEEEECTTSC
T ss_pred             ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccc----------eEEEecCCCCCeEEEEEEEcCCCC
Confidence            567899 9998888877643             7788877654211          12223344 555678899999999


Q ss_pred             EEEee----cCCCcEEEEeecCCC
Q psy14043        174 KLTSS----DETGLIIVWMLYKEK  193 (205)
Q Consensus       174 ~las~----~~d~~i~~wd~~~~~  193 (205)
                      +|+-.    +.+..|.+||+.++.
T Consensus       247 ~l~~~~~~~~~~~~i~~~d~~~~~  270 (693)
T 3iuj_A          247 FLLISAANSTSGNRLYVKDLSQEN  270 (693)
T ss_dssp             EEEEEEESSSSCCEEEEEETTSTT
T ss_pred             EEEEEEccCCCCcEEEEEECCCCC
Confidence            87432    234589999987763

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=95.33  E-value=0.066  Score=39.65  Aligned_cols=77  Identities=14%  Similarity=0.064  Sum_probs=52.5

Q ss_pred             cccccc----cCCCee-eecccccceEEEEecC-CCCcchhhhhhcccceeceecccce-eeEEEEEEcCCCCEEEeecC
Q psy14043        108 NCLAWH----QNQGWI-AVGGDDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSLQGHS-GKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       108 ~~~~~~----~~~~~l-asg~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~gh~-~~v~~~~~s~~~~~las~~~  180 (205)
                      +.+.++    ++++.+ ++...++.+.+|+.+. +..         ........+.++. .....++++++|+.+++...
T Consensus       175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---------~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~  245 (314)
T 1pjx_A          175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---------ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG  245 (314)
T ss_dssp             EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---------EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred             ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---------ccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence            456788    888644 4445678899999862 210         0001222344454 56788999999999999888


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      ++.|.+||..+++
T Consensus       246 ~~~i~~~d~~~g~  258 (314)
T 1pjx_A          246 SSHIEVFGPDGGQ  258 (314)
T ss_dssp             TTEEEEECTTCBS
T ss_pred             CCEEEEEcCCCCc
Confidence            9999999987554

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=95.11  E-value=0.061  Score=40.12  Aligned_cols=68  Identities=12%  Similarity=-0.030  Sum_probs=49.7

Q ss_pred             ccccccccCCC-eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        107 VNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       107 ~~~~~~~~~~~-~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .....|+++++ .+.++..++.+..|+.. +.               ...+..+...+.+++++++|+.+++...++.|.
T Consensus        47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~---------------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~  110 (305)
T 3dr2_A           47 SEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT---------------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAIT  110 (305)
T ss_dssp             EEEEEEEGGGTEEEEEETTTTEEEEEETT-SC---------------EEEEEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred             ccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC---------------EEEEeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence            34567899987 56777778888888763 32               123344556688999999999887777778899


Q ss_pred             EEeec
Q psy14043        186 VWMLY  190 (205)
Q Consensus       186 ~wd~~  190 (205)
                      +||..
T Consensus       111 ~~~~~  115 (305)
T 3dr2_A          111 RSDAD  115 (305)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            99864

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=95.11  E-value=0.048  Score=41.31  Aligned_cols=63  Identities=11%  Similarity=-0.060  Sum_probs=46.4

Q ss_pred             CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        116 QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       116 ~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      ++..++...++.+.++|..+..              ...++.+ ......++++++++..++...++.|.+||+.+++
T Consensus        54 ~~lyv~~~~~~~v~viD~~t~~--------------~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~  116 (328)
T 3dsm_A           54 GIGWIVVNNSHVIFAIDINTFK--------------EVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE  116 (328)
T ss_dssp             TEEEEEEGGGTEEEEEETTTCC--------------EEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE
T ss_pred             CEEEEEEcCCCEEEEEECcccE--------------EEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe
Confidence            4455555567899999999876              3344432 3456889999999767776689999999998765

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=95.10  E-value=0.052  Score=43.01  Aligned_cols=70  Identities=16%  Similarity=0.169  Sum_probs=49.9

Q ss_pred             cccccCCCeeeecc----------cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC-EEEee
Q psy14043        110 LAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSS  178 (205)
Q Consensus       110 ~~~~~~~~~lasg~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~-~las~  178 (205)
                      +.++++++.+....          .++.+.+.|..+..              ...++.. ....++++|+|||+ +|.++
T Consensus       324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------------vv~~I~v-g~~P~gia~spDg~~~lyv~  388 (426)
T 3c75_H          324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------------RINKIEL-GHEIDSINVSQDAEPLLYAL  388 (426)
T ss_dssp             EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEEE-EEEECEEEECCSSSCEEEEE
T ss_pred             eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------------EEEEEEC-CCCcCeEEEccCCCEEEEEE
Confidence            56788876554432          13568888888776              3344431 12478899999999 88888


Q ss_pred             c-CCCcEEEEeecCCCC
Q psy14043        179 D-ETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~-~d~~i~~wd~~~~~~  194 (205)
                      . .+++|.|+|+.+.+.
T Consensus       389 n~~s~~VsVID~~t~kv  405 (426)
T 3c75_H          389 SAGTQTLHIYDAATGEE  405 (426)
T ss_dssp             ETTTTEEEEEETTTCCE
T ss_pred             cCCCCeEEEEECCCCCE
Confidence            7 599999999988764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=94.67  E-value=0.1  Score=38.78  Aligned_cols=68  Identities=7%  Similarity=-0.004  Sum_probs=48.5

Q ss_pred             cccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        108 NCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       108 ~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      ....|+++ +..+.+....+.|..|+.+++.              . .. ..+...+.+++++++|+++++.  +..|.+
T Consensus        16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~--------------~-~~-~~~~~~~~~i~~~~dG~l~v~~--~~~l~~   77 (297)
T 3g4e_A           16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ--------------V-QR-VTMDAPVSSVALRQSGGYVATI--GTKFCA   77 (297)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTCC--------------E-EE-EECSSCEEEEEEBTTSSEEEEE--TTEEEE
T ss_pred             cCCeEECCCCEEEEEECCCCEEEEEECCCCc--------------E-EE-EeCCCceEEEEECCCCCEEEEE--CCeEEE
Confidence            45678885 4566677778889999988764              1 11 1234568999999999976664  567999


Q ss_pred             EeecCCC
Q psy14043        187 WMLYKEK  193 (205)
Q Consensus       187 wd~~~~~  193 (205)
                      ||..+++
T Consensus        78 ~d~~~g~   84 (297)
T 3g4e_A           78 LNWKEQS   84 (297)
T ss_dssp             EETTTTE
T ss_pred             EECCCCc
Confidence            9987654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=94.52  E-value=0.067  Score=42.03  Aligned_cols=71  Identities=17%  Similarity=0.135  Sum_probs=50.6

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC--cE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG--LI  184 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~--~i  184 (205)
                      ...++++++++.+++...++.|+.|+.+++.              +...... ..... ++|+++++.|..++.++  .|
T Consensus       133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------------~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I  196 (409)
T 3hrp_A          133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------------VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTV  196 (409)
T ss_dssp             EEEEEECSTTEEEEEETTTTEEEEEETTTTE--------------EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred             ceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------------EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceE
Confidence            4567788999888888778899999988764              2111222 12223 99999999998888876  78


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      .++|...+.
T Consensus       197 ~~~d~~~~~  205 (409)
T 3hrp_A          197 YVYMKASGW  205 (409)
T ss_dssp             EEEEGGGTT
T ss_pred             EEEEcCCCc
Confidence            888876543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=94.34  E-value=0.15  Score=37.19  Aligned_cols=71  Identities=10%  Similarity=-0.069  Sum_probs=50.4

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      .....+.+.+++...++...++.+..|+.+...              ....+..+...+.++++.++|+.+++...++.|
T Consensus        57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i  122 (299)
T 2z2n_A           57 AKVMCLTISSDGEVWFTENAANKIGRITKKGII--------------KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRI  122 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred             CceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------------EEEeCCCcCCCceeeEECCCCCEEEEecCCceE
Confidence            346677788888877777667778888765211              001112234567899999999999888888999


Q ss_pred             EEEee
Q psy14043        185 IVWML  189 (205)
Q Consensus       185 ~~wd~  189 (205)
                      .+||.
T Consensus       123 ~~~d~  127 (299)
T 2z2n_A          123 GRITD  127 (299)
T ss_dssp             EEECT
T ss_pred             EEECC
Confidence            99987

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=94.31  E-value=0.17  Score=36.92  Aligned_cols=72  Identities=14%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      ..+..+.+.++++..++...++.+..|+.+ +..             ....+..+...+.+++++++|..+++...++.|
T Consensus        15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i   80 (299)
T 2z2n_A           15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKI-------------TEYPLPTPDAKVMCLTISSDGEVWFTENAANKI   80 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred             CCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-------------EEecCCcccCceeeEEECCCCCEEEeCCCCCeE
Confidence            356788889999877777667888888877 431             111122234678899999999999888888999


Q ss_pred             EEEeec
Q psy14043        185 IVWMLY  190 (205)
Q Consensus       185 ~~wd~~  190 (205)
                      ..||..
T Consensus        81 ~~~~~~   86 (299)
T 2z2n_A           81 GRITKK   86 (299)
T ss_dssp             EEECTT
T ss_pred             EEECCC
Confidence            999865

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=94.31  E-value=0.051  Score=42.47  Aligned_cols=68  Identities=10%  Similarity=-0.001  Sum_probs=46.3

Q ss_pred             ccccCCCeeeeccc-----ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec------
Q psy14043        111 AWHQNQGWIAVGGD-----DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD------  179 (205)
Q Consensus       111 ~~~~~~~~lasg~~-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~------  179 (205)
                      ...|+++++.....     ++.+.+.|..+..              ...+...-..+ . +++||||++|..++      
T Consensus        39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--------------v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~  102 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGR--------------VIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRI  102 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTE--------------EEEEEEECSSC-E-EEECTTSSCEEEEEEEEEET
T ss_pred             ccCCCCCEEEEEcCcccCCCCEEEEEECCCCe--------------EEEEEECCCCC-c-EEECCCCCEEEEEccccccc
Confidence            34677766655543     5788888888765              33333321223 3 99999999887765      


Q ss_pred             ----CCCcEEEEeecCCCC
Q psy14043        180 ----ETGLIIVWMLYKEKN  194 (205)
Q Consensus       180 ----~d~~i~~wd~~~~~~  194 (205)
                          .+++|.+||+.+.+.
T Consensus       103 ~~G~~~~~VsviD~~t~~v  121 (386)
T 3sjl_D          103 ARGERTDYVEVFDPVTLLP  121 (386)
T ss_dssp             TEEEEEEEEEEECTTTCCE
T ss_pred             ccCCCCCEEEEEECCCCeE
Confidence                367899999988653

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=94.29  E-value=0.18  Score=37.47  Aligned_cols=32  Identities=9%  Similarity=0.079  Sum_probs=24.8

Q ss_pred             eeEEEEEEcCCCCEEEeecCC------CcEEEEeecCC
Q psy14043        161 GKVRAIIWNEQYEKLTSSDET------GLIIVWMLYKE  192 (205)
Q Consensus       161 ~~v~~~~~s~~~~~las~~~d------~~i~~wd~~~~  192 (205)
                      .....++|+||++.|..+..+      +.|.+||+..+
T Consensus       188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~  225 (305)
T 3dr2_A          188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG  225 (305)
T ss_dssp             SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred             CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence            345789999999987777655      78999998643

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=94.21  E-value=0.096  Score=39.56  Aligned_cols=68  Identities=10%  Similarity=-0.055  Sum_probs=47.0

Q ss_pred             cccccccCC-CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        108 NCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       108 ~~~~~~~~~-~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      ....|++++ ..+.++..++.|..|+.+++.              . ..+ .+...+.+++|+++|+++++. . ..|.+
T Consensus        52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~--------------~-~~~-~~~~~v~~i~~~~dg~l~v~~-~-~gl~~  113 (326)
T 2ghs_A           52 EGPTFDPASGTAWWFNILERELHELHLASGR--------------K-TVH-ALPFMGSALAKISDSKQLIAS-D-DGLFL  113 (326)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTE--------------E-EEE-ECSSCEEEEEEEETTEEEEEE-T-TEEEE
T ss_pred             cCCeEeCCCCEEEEEECCCCEEEEEECCCCc--------------E-EEE-ECCCcceEEEEeCCCeEEEEE-C-CCEEE
Confidence            456788874 556666677888888887653              1 111 123468999999999988876 3 34999


Q ss_pred             EeecCCC
Q psy14043        187 WMLYKEK  193 (205)
Q Consensus       187 wd~~~~~  193 (205)
                      ||..+++
T Consensus       114 ~d~~~g~  120 (326)
T 2ghs_A          114 RDTATGV  120 (326)
T ss_dssp             EETTTCC
T ss_pred             EECCCCc
Confidence            9987665

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=94.14  E-value=0.016  Score=45.09  Aligned_cols=69  Identities=9%  Similarity=-0.203  Sum_probs=49.8

Q ss_pred             ccccccCCCeeeecc----------cccceEEEEecCCCCcchhhhhhcccceeceecccc-------eeeEEEEEEcCC
Q psy14043        109 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-------SGKVRAIIWNEQ  171 (205)
Q Consensus       109 ~~~~~~~~~~lasg~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh-------~~~v~~~~~s~~  171 (205)
                      .+.++|+++.+..+.          .++.+.++|..+..              ...++.-+       ...-..+++|||
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--------------vv~~I~v~~~~~~~~g~~P~~ia~SpD  134 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--------------PIADIELPDAPRFSVGPRVHIIGNCAS  134 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--------------EEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--------------EEEEEECCCccccccCCCcceEEEcCC
Confidence            688999998887775          37889999999887              33333211       011246899999


Q ss_pred             CCEEEeecC--CCcEEE--EeecC
Q psy14043        172 YEKLTSSDE--TGLIIV--WMLYK  191 (205)
Q Consensus       172 ~~~las~~~--d~~i~~--wd~~~  191 (205)
                      |++|..+..  +..+.+  +|+.+
T Consensus       135 Gk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          135 SACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             SSCEEEEECSSSCEEEEEETTTEE
T ss_pred             CCEEEEEccCCCCeEEEEEEchhh
Confidence            999888864  467888  99865

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=93.68  E-value=0.013  Score=45.37  Aligned_cols=61  Identities=18%  Similarity=0.162  Sum_probs=32.1

Q ss_pred             CCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        115 NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       115 ~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      .+..+.+|+.++.+..||..++.              ...++..+.    ...++|++..+++++.|+.|..||..+++
T Consensus        91 ~~~~v~~g~~dg~v~a~D~~tG~--------------~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~  151 (369)
T 2hz6_A           91 SDGILYMGKKQDIWYVIDLLTGE--------------KQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE  151 (369)
T ss_dssp             ----CCCCEEEEEEEEECCC----------------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred             cCCEEEEEeCCCEEEEEECCCCc--------------EEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence            34567788889999999999886              223333332    23456788899999999999999998876

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=93.61  E-value=0.041  Score=41.94  Aligned_cols=83  Identities=11%  Similarity=0.099  Sum_probs=49.6

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      .+.++++|+++.+..+...+. ++|.++..........  ...+.......|+......++++++|..+++...++.|.+
T Consensus       197 ~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~--~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~  273 (343)
T 2qe8_A          197 VNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLT--DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGV  273 (343)
T ss_dssp             EEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCC--HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEE
T ss_pred             cceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCC--hhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEE
Confidence            466888999987777755543 5666653210000000  0000000012244445567999999999999999999999


Q ss_pred             EeecCC
Q psy14043        187 WMLYKE  192 (205)
Q Consensus       187 wd~~~~  192 (205)
                      ||..++
T Consensus       274 ~d~~~G  279 (343)
T 2qe8_A          274 ITSADR  279 (343)
T ss_dssp             EETTTT
T ss_pred             EECCCC
Confidence            998444

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.47  E-value=0.35  Score=38.29  Aligned_cols=85  Identities=8%  Similarity=0.125  Sum_probs=55.5

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCC-Ccc--hh-hhhhcccceeceecccceeeEEEEEEcC---CCCEEEee
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK-EST--GQ-VAAANVNLAMNQSLQGHSGKVRAIIWNE---QYEKLTSS  178 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~-~~~--~~-~~~~~~~~~~~~~~~gh~~~v~~~~~s~---~~~~las~  178 (205)
                      .+..+..+|.|+++|.-+ +..+.+..+..+. ...  +. ...+...+.+.......+.+|..+.|+|   .+..|+.-
T Consensus        67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            456688899999999986 4578888887432 111  10 0011111222111112468899999999   45679999


Q ss_pred             cCCCcEEEEeecC
Q psy14043        179 DETGLIIVWMLYK  191 (205)
Q Consensus       179 ~~d~~i~~wd~~~  191 (205)
                      -.|++|++||+..
T Consensus       146 tsD~~Ir~yDl~~  158 (452)
T 3pbp_A          146 KEDDTITMFDILN  158 (452)
T ss_dssp             ETTSCEEEEETTC
T ss_pred             ecCCEEEEEEccc
Confidence            9999999999987

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=93.42  E-value=0.51  Score=35.51  Aligned_cols=75  Identities=13%  Similarity=0.066  Sum_probs=49.5

Q ss_pred             ccccccccCCCee-eecccccceEEEEec--CC-CCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        107 VNCLAWHQNQGWI-AVGGDDGLLKVLKLD--TG-KESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       107 ~~~~~~~~~~~~l-asg~~d~~i~iw~~~--~~-~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      .+.+.|+++++.+ .+.+.++.|.+|+++  ++ ....         ......+.++.....++++.++|..+++...++
T Consensus       181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~---------~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~  251 (326)
T 2ghs_A          181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK---------AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG  251 (326)
T ss_dssp             EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC---------CEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred             cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC---------ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence            3567889999765 444556788899886  33 2100         001122333445567899999999888877778


Q ss_pred             cEEEEeec
Q psy14043        183 LIIVWMLY  190 (205)
Q Consensus       183 ~i~~wd~~  190 (205)
                      .|.+||..
T Consensus       252 ~v~~~d~~  259 (326)
T 2ghs_A          252 AVDRYDTD  259 (326)
T ss_dssp             EEEEECTT
T ss_pred             EEEEECCC
Confidence            99999873

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=93.25  E-value=0.077  Score=45.15  Aligned_cols=70  Identities=10%  Similarity=0.122  Sum_probs=45.5

Q ss_pred             ccccccc-cCCCeeeecc-----cccceEEEEecCC-CCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        107 VNCLAWH-QNQGWIAVGG-----DDGLLKVLKLDTG-KESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       107 ~~~~~~~-~~~~~lasg~-----~d~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      +....|+ |+|+++|-..     ....+.++|++++ ..             +...+.   ....+++|||||+.|+-..
T Consensus       176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-------------l~~~~~---~~~~~~~WspDg~~l~y~~  239 (751)
T 2xe4_A          176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-------------IADKVS---GTNGEIVWGPDHTSLFYVT  239 (751)
T ss_dssp             EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-------------CCCCEE---EECSCCEECSSTTEEEEEE
T ss_pred             EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-------------CCcccc---CceeeEEEecCCCEEEEEE
Confidence            3456789 9999888543     2345888898877 41             111111   1235689999999888777


Q ss_pred             CCC-----cEEEEeecCC
Q psy14043        180 ETG-----LIIVWMLYKE  192 (205)
Q Consensus       180 ~d~-----~i~~wd~~~~  192 (205)
                      .|.     .|.++++.++
T Consensus       240 ~d~~~~~~~v~~~~lgt~  257 (751)
T 2xe4_A          240 KDETLRENKVWRHVMGKL  257 (751)
T ss_dssp             ECTTCCEEEEEEEETTSC
T ss_pred             ECCCCCCCEEEEEECCCC
Confidence            652     5777777654

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=93.18  E-value=0.19  Score=38.14  Aligned_cols=80  Identities=6%  Similarity=-0.043  Sum_probs=51.6

Q ss_pred             cccccccccCCCeeeecc--cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC---
Q psy14043        106 KVNCLAWHQNQGWIAVGG--DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE---  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~---  180 (205)
                      ....++++++++.+++..  .++..++|.++++.     ...-|.   ......+|-..+.+++++++|+.+++-..   
T Consensus        18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-----~~~~p~---~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~   89 (343)
T 2qe8_A           18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-----LIPFPP---QSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS   89 (343)
T ss_dssp             CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-----EEESCC---CCSSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred             CcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-----eecCCC---cccCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence            456678889998887743  23437788886221     100010   00123356778999999999987665433   


Q ss_pred             --CCcEEEEeecCCC
Q psy14043        181 --TGLIIVWMLYKEK  193 (205)
Q Consensus       181 --d~~i~~wd~~~~~  193 (205)
                        +..|.+||+.+++
T Consensus        90 ~~~~~i~~~d~~tg~  104 (343)
T 2qe8_A           90 KSVPKLVAWDTLNNQ  104 (343)
T ss_dssp             TSCCEEEEEETTTTE
T ss_pred             CCCCeEEEEECCCCe
Confidence              6789999998765

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=92.56  E-value=0.47  Score=34.51  Aligned_cols=71  Identities=8%  Similarity=-0.042  Sum_probs=51.9

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ....+.+.++++...+...++.+.+++.+ +..             ....+..+...+.++++.++|+.+++...++.|.
T Consensus        21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~   86 (300)
T 2qc5_A           21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-------------KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIG   86 (300)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred             CcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-------------EEEECCCCCCcceeEEECCCCCEEEEecCCCeEE
Confidence            45677888888877777677888888876 331             1112223345688999999999888888888999


Q ss_pred             EEeec
Q psy14043        186 VWMLY  190 (205)
Q Consensus       186 ~wd~~  190 (205)
                      ++|..
T Consensus        87 ~~d~~   91 (300)
T 2qc5_A           87 KLSKK   91 (300)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            99876

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=92.53  E-value=0.066  Score=42.43  Aligned_cols=72  Identities=8%  Similarity=-0.105  Sum_probs=50.5

Q ss_pred             ccccccCCCeeeecc----------cccceEEEEecCCCCcchhhhhhcccceeceecc-c------ceeeEEEEEEcCC
Q psy14043        109 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-G------HSGKVRAIIWNEQ  171 (205)
Q Consensus       109 ~~~~~~~~~~lasg~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-g------h~~~v~~~~~s~~  171 (205)
                      .+.++|+++++..+.          .++.+.++|..+...              ..++. +      +...-..++++||
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v--------------v~~I~v~g~~r~~~g~~P~~~~~spD  187 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP--------------IADIELPDAPRFLVGTYQWMNALTPD  187 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--------------EEEEEETTCCCCCBSCCGGGSEECTT
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE--------------EEEEECCCccccccCCCcceEEEcCC
Confidence            688999998887765          367899999888762              22211 0      0011235899999


Q ss_pred             CCEEEeecC--CCcEEEEeecCCCC
Q psy14043        172 YEKLTSSDE--TGLIIVWMLYKEKN  194 (205)
Q Consensus       172 ~~~las~~~--d~~i~~wd~~~~~~  194 (205)
                      |++|..+..  +++|.+.|+.+.+.
T Consensus       188 Gk~lyV~n~~~~~~VsVID~~t~kv  212 (426)
T 3c75_H          188 NKNLLFYQFSPAPAVGVVDLEGKTF  212 (426)
T ss_dssp             SSEEEEEECSSSCEEEEEETTTTEE
T ss_pred             CCEEEEEecCCCCeEEEEECCCCeE
Confidence            999888764  67899999988653

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=92.09  E-value=0.55  Score=36.79  Aligned_cols=68  Identities=13%  Similarity=0.128  Sum_probs=49.9

Q ss_pred             ccccccccCCCeeeecc-cccceEEEEecCCCCcchhhhhhcccceeceecccc---------------eeeEEEEEEcC
Q psy14043        107 VNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH---------------SGKVRAIIWNE  170 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh---------------~~~v~~~~~s~  170 (205)
                      ...++++++++..++.. .+..|+.|+..++..               .++.|+               -.....+++++
T Consensus       325 P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v---------------~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~  389 (409)
T 3hrp_A          325 PNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV---------------STVAGQVDVASQIDGTPLEATFNYPYDICYDG  389 (409)
T ss_dssp             EEEEEECTTCCEEEEETTTTCEEEEEETTTTEE---------------EEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred             CeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE---------------EEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence            45577888998878877 788899998655431               122222               23468899999


Q ss_pred             CCCEEEeecCCCcEEEEee
Q psy14043        171 QYEKLTSSDETGLIIVWML  189 (205)
Q Consensus       171 ~~~~las~~~d~~i~~wd~  189 (205)
                      +|..+++-..++.|+.+++
T Consensus       390 ~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          390 EGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             SSEEEEEESTTCEEEEEEE
T ss_pred             CCCEEEEECCCCeEEEEEe
Confidence            9999999999999998765

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=91.65  E-value=0.66  Score=33.70  Aligned_cols=71  Identities=13%  Similarity=-0.068  Sum_probs=49.5

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ....+.+.+++....+...++.+..++.+ +..             ....+......+.++++.++|+.+++...++.|.
T Consensus        63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~  128 (300)
T 2qc5_A           63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-------------TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIG  128 (300)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------------EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred             cceeEEECCCCCEEEEecCCCeEEEECCC-CCe-------------EEecCCCCCCCCccceECCCCCEEEEccCCCeEE
Confidence            45667778888877776666778887766 331             1112222335678999999999988888888999


Q ss_pred             EEeec
Q psy14043        186 VWMLY  190 (205)
Q Consensus       186 ~wd~~  190 (205)
                      .+|..
T Consensus       129 ~~~~~  133 (300)
T 2qc5_A          129 KLTAD  133 (300)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            99876

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=91.18  E-value=0.62  Score=39.61  Aligned_cols=74  Identities=8%  Similarity=-0.027  Sum_probs=43.9

Q ss_pred             cccccccCCCeeeeccccc-----ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC--
Q psy14043        108 NCLAWHQNQGWIAVGGDDG-----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE--  180 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~--  180 (205)
                      ..+.|+|+++.++....+.     .|..+++.++...+          .+... ..+..-...+.|||||++|+..+.  
T Consensus       224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~----------~lv~~-~~~~~~~~~~~~SpDg~~l~~~~~~~  292 (751)
T 2xe4_A          224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSED----------VCLYE-EHNPLFSAFMYKAADTNTLCIGSQSP  292 (751)
T ss_dssp             SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGC----------EEEEE-CCCTTCEEEEEECTTSSEEEEEEECS
T ss_pred             eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhc----------EEEEe-cCCCceEEEEEECCCCCEEEEEecCC
Confidence            4577999998877765542     35555555432110          01000 112233567899999999876653  


Q ss_pred             -CCcEEEEeecCC
Q psy14043        181 -TGLIIVWMLYKE  192 (205)
Q Consensus       181 -d~~i~~wd~~~~  192 (205)
                       ...|.++|+.++
T Consensus       293 ~~~~l~~~d~~~~  305 (751)
T 2xe4_A          293 ETAEVHLLDLRKG  305 (751)
T ss_dssp             SCEEEEEEESSSC
T ss_pred             CCceEEEEECCCC
Confidence             345888888765

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=90.17  E-value=0.37  Score=34.52  Aligned_cols=43  Identities=26%  Similarity=0.376  Sum_probs=30.4

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCcCCCCCHHHHHHHHHhccc
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT   79 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~   79 (205)
                      +.+.=|||||+++|..+--                     .++......+|+++..||..|..-
T Consensus       114 te~~~IysLG~tLY~ALDy---------------------gL~e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A          114 METEVIESLGIIIYKALDY---------------------GLKENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             CHHHHHHHHHHHHHHHHTT---------------------TCCTTEEECCCHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHHHHhhc---------------------CCCcccchhhCHHHHHHHHHHHhc
Confidence            4667799999999988752                     222333336888999999887654

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=88.89  E-value=0.34  Score=40.75  Aligned_cols=31  Identities=3%  Similarity=0.021  Sum_probs=24.6

Q ss_pred             EEEEEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        164 RAIIWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       164 ~~~~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                      .+..++.++..++.++.|+.+++||..+++.
T Consensus       480 ~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~  510 (677)
T 1kb0_A          480 NGGTLTTAGNVVFQGTADGRLVAYHAATGEK  510 (677)
T ss_dssp             CCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence            3444556777888899999999999998863

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=88.33  E-value=0.46  Score=40.01  Aligned_cols=28  Identities=7%  Similarity=0.087  Sum_probs=23.4

Q ss_pred             EEcCCCCEEEeecCCCcEEEEeecCCCC
Q psy14043        167 IWNEQYEKLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       167 ~~s~~~~~las~~~d~~i~~wd~~~~~~  194 (205)
                      .++..+..++.++.|+.++.||..+++.
T Consensus       481 ~~~tagglvf~gt~dg~l~a~D~~tG~~  508 (689)
T 1yiq_A          481 TLSTAGNLVFEGSADGRVIAYAADTGEK  508 (689)
T ss_dssp             EEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cceECCCEEEEECCCCcEEEEECCCCcc
Confidence            4455677889999999999999999873

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=87.97  E-value=2.7  Score=31.07  Aligned_cols=72  Identities=10%  Similarity=0.094  Sum_probs=44.9

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC--c
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG--L  183 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~--~  183 (205)
                      ....++++++++.+.+....+.|..++.+...               .... .-.....++++.++|+.+++.....  .
T Consensus        33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------------~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~   96 (306)
T 2p4o_A           33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------------QIHA-TVEGKVSGLAFTSNGDLVATGWNADSIP   96 (306)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------------EEEE-ECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CcceEEECCCCCEEEEeCCCCeEEEECCCCce---------------EEEE-eCCCCceeEEEcCCCcEEEEeccCCcce
Confidence            44567888888877776677777777765432               0111 1123578899999998766554322  4


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      |..+|..+++
T Consensus        97 v~~~d~~~g~  106 (306)
T 2p4o_A           97 VVSLVKSDGT  106 (306)
T ss_dssp             EEEEECTTSC
T ss_pred             EEEEcCCCCe
Confidence            6666655554

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=82.64  E-value=3.9  Score=33.80  Aligned_cols=83  Identities=8%  Similarity=0.014  Sum_probs=52.8

Q ss_pred             ccccccccccCCCeee-ecccccceEEEEecCCCCc-chhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        105 TKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDTGKES-TGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       105 ~~~~~~~~~~~~~~la-sg~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      .....+.++|||+++. ++..+..+.++|+++.... ++..  .+.. ....... -...-..++|+++|....+.--|+
T Consensus       277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l--~~~~-~v~~~v~-vG~gP~h~aF~~dG~aY~t~~lds  352 (595)
T 1fwx_A          277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA--DPRS-AVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDS  352 (595)
T ss_dssp             SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC--CGGG-GEEECCB-CCSCEEEEEECTTSEEEEEETTTT
T ss_pred             CCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccccc--Cccc-ceEEEcC-CCCCcceEEECCCCeEEEEEecCC
Confidence            3567889999998654 4557889999999864210 0000  0000 0111111 112347799999996677888899


Q ss_pred             cEEEEeecC
Q psy14043        183 LIIVWMLYK  191 (205)
Q Consensus       183 ~i~~wd~~~  191 (205)
                      +|.+||+.+
T Consensus       353 qV~kwdi~~  361 (595)
T 1fwx_A          353 QVVKWNIED  361 (595)
T ss_dssp             EEEEEEHHH
T ss_pred             cEEEEEhhH
Confidence            999999876

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=80.94  E-value=5.6  Score=29.23  Aligned_cols=69  Identities=10%  Similarity=-0.020  Sum_probs=45.4

Q ss_pred             ccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc----c-ceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        111 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ----G-HSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       111 ~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----g-h~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ...++++.+..+..++.+.++|.++..              ...+..    + .-...+.+.|. +|+..+....++.|.
T Consensus       111 glt~Dg~~l~vs~gs~~l~viD~~t~~--------------v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~  175 (266)
T 2iwa_A          111 GLATDGKILYGSDGTSILYEIDPHTFK--------------LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA  175 (266)
T ss_dssp             EEEECSSSEEEECSSSEEEEECTTTCC--------------EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred             EEEECCCEEEEECCCCeEEEEECCCCc--------------EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence            355667655555557778888877655              112221    1 11235778888 787788887889999


Q ss_pred             EEeecCCCC
Q psy14043        186 VWMLYKEKN  194 (205)
Q Consensus       186 ~wd~~~~~~  194 (205)
                      +-|+.+++.
T Consensus       176 vID~~tg~V  184 (266)
T 2iwa_A          176 RISAKDGTL  184 (266)
T ss_dssp             EEETTTCCE
T ss_pred             EEECCCCcE
Confidence            999988763

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=80.84  E-value=2.1  Score=35.59  Aligned_cols=75  Identities=9%  Similarity=-0.026  Sum_probs=45.5

Q ss_pred             ccccc-CCCeeeeccccc-----------ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        110 LAWHQ-NQGWIAVGGDDG-----------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       110 ~~~~~-~~~~lasg~~d~-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .++.+ +++.++.|+.+.           .+.+||..+..-..           +...-..+.....++++..+|+.++.
T Consensus       191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~-----------~~~~~~~~~~~~~~~~~~~~g~lyv~  259 (656)
T 1k3i_A          191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD-----------RTVTVTKHDMFCPGISMDGNGQIVVT  259 (656)
T ss_dssp             EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC-----------CEEEECSCCCSSCEEEECTTSCEEEE
T ss_pred             EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe-----------CcccCCCCCCccccccCCCCCCEEEe
Confidence            34455 677777776432           45666666543110           11111122233345677889999999


Q ss_pred             ecC-CCcEEEEeecCCCCC
Q psy14043        178 SDE-TGLIIVWMLYKEKNP  195 (205)
Q Consensus       178 ~~~-d~~i~~wd~~~~~~~  195 (205)
                      |+. +..+.+||..+..|.
T Consensus       260 GG~~~~~v~~yd~~t~~W~  278 (656)
T 1k3i_A          260 GGNDAKKTSLYDSSSDSWI  278 (656)
T ss_dssp             CSSSTTCEEEEEGGGTEEE
T ss_pred             CCCCCCceEEecCcCCcee
Confidence            984 568999999888774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	205
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-21
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-21
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-19
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-18
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-17
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-16
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-16
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-15
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-14
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-13
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-13
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-10
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-09
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	8e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-08
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-08
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-08
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.001
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.002
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.002
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	9e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.003
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.003

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 1e-22
 Identities = 36/96 (37%), Positives = 54/96 (56%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
                 +TDMWSLG L+Y+LLSG++PFL E+ ++   +I  A+Y+F  E    IS+ A +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
            + +LL      R TA + LQ  W  +     +TKV
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 87.8 bits (217), Expect = 2e-21
 Identities = 34/93 (36%), Positives = 48/93 (51%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
            G   G  TDMWS+GVL YILLSG+SPF  E+++ET  ++   D++        IS   +
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
           + I +LL    + R T  Q L+  W      P 
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 290

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 4e-21
 Identities = 35/88 (39%), Positives = 48/88 (54%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
               G   DMWS+GV+ YILLSG SPFL ++++ET A++S  +Y F  E   + S  A++
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKD 249

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAEI 99
            I +LL     KR T    LQ  W    
Sbjct: 250 FIRRLLVKDPKKRMTIQDSLQHPWIKPK 277

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 85.9 bits (212), Expect = 5e-21
 Identities = 26/89 (29%), Positives = 39/89 (43%)

Query: 10  DLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
           D     G   DMWS GV++Y LL+G  PF    +      I   +Y F   +    S   
Sbjct: 187 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 246

Query: 70  RELIGQLLNTHADKRPTAGQLLQVAWFAE 98
           ++L+ + L     KR TA + L   +F +
Sbjct: 247 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 84.0 bits (207), Expect = 6e-20
 Identities = 31/86 (36%), Positives = 44/86 (51%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
                G  TDMW++GVL Y+LLSG+SPF  E + ET  ++   D+ F  +    +S  A+
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWF 96
           + I  LL     KR T    L+  W 
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWL 286

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.6 bits (201), Expect = 3e-19
 Identities = 31/86 (36%), Positives = 42/86 (48%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
                 + D WS+GV+ YILL G  PF DE++ +    I  A+Y F       IS  A++
Sbjct: 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 242

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFA 97
            I  L+    +KR T  Q LQ  W A
Sbjct: 243 FIRHLMEKDPEKRFTCEQALQHPWIA 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 2e-18
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           LG     S D WS GVLLY +L G SPF  + EEE    I + +  +P      +   A+
Sbjct: 176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR----WLEKEAK 231

Query: 71  ELIGQLLNTHADKRPTA-GQLLQVAWFAEI 99
           +L+ +L     +KR    G + Q   F EI
Sbjct: 232 DLLVKLFVREPEKRLGVRGDIRQHPLFREI 261

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 2e-18
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G       D+WSLGVL Y  L G  PF   + +ET   IS  +++FP      ++  AR+
Sbjct: 178 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARD 233

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWFAE 98
           LI +LL  +  +RP   ++L+  W   
Sbjct: 234 LISRLLKHNPSQRPMLREVLEHPWITA 260

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 2e-17
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
             SA  S+D+W+LG ++Y L++G+ PF   +E      I   +Y FP          AR+
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE----KFFPKARD 239

Query: 72  LIGQLLNTHADKRPTAGQLLQVA------WFAEI 99
           L+ +LL   A KR    ++          +F  +
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 4e-17
 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
             + GP  D+WSLG++   ++ G  P+L+E+       I   + +   +    +S   R+
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-ATNGTPELQNPEKLSAIFRD 248

Query: 72  LIGQLLNTHADKRPTAGQLLQVAWF 96
            + + L+   +KR +A +LLQ  + 
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFL 273

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 2e-16
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             + D WSLGVL+Y LL+G SPF  + E+ ++A IS       P     +S  A++LI +
Sbjct: 210 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQR 269

Query: 76  LLNTHADKRP-----TAGQLLQVAWFAEI 99
           LL     KR       A ++ +  +F +I
Sbjct: 270 LLMKDPKKRLGCGPRDADEIKEHLFFQKI 298

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 2e-16
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 8   LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISV 67
            I      G S  +WSLG+LLY ++ G  PF  + E      I      F       +S 
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSS 229

Query: 68  PARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
             + LI   L      RPT  ++    W  ++ +P  T 
Sbjct: 230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 3e-16
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
             S    +D+WSLG LLY L + + PF   S++E    I    +   P      S    E
Sbjct: 188 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---RYSDELNE 244

Query: 72  LIGQLLNTHADKRPTAGQLLQVAW 95
           +I ++LN     RP+  ++L+   
Sbjct: 245 IITRMLNLKDYHRPSVEEILENPL 268

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.1 bits (176), Expect = 5e-16
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
            G S    +D++SLG +LY +L+G  PF  +S           D   P  +   +S    
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAW 95
            ++ + L  + + R      ++   
Sbjct: 247 AVVLKALAKNPENRYQTAAEMRADL 271

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 5e-16
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEET----RAHISVADYSFPPEQCGHISV 67
                 S DMWSLGV++YILL G  PF            +  I +  Y FP  +   +S 
Sbjct: 187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 246

Query: 68  PARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVN 108
             + LI  LL T   +R T  + +   W  +      T ++
Sbjct: 247 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 287

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 1e-15
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+WSLG+ L  +     P  + +       I+ ++     +     S   ++ + +
Sbjct: 193 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS-RWSSNFKDFLKK 251

Query: 76  LLNTHADKRPTAGQLLQVAWF 96
            L  + D R T  QLLQ  + 
Sbjct: 252 CLEKNVDARWTTSQLLQHPFV 272

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.2 bits (174), Expect = 2e-15
 Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 2/89 (2%)

Query: 15  AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 74
                D+WSLG+    L     P  + +      HI+  +   P  Q GH S   R  + 
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PALQSGHWSEYFRNFVD 248

Query: 75  QLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
             L      RPT+  LL+  +      P 
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPT 277

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.5 bits (172), Expect = 3e-15
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 9/93 (9%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
                 S D WS G+L+Y +L+G +PF D +  +T   I  A+  FPP      +   ++
Sbjct: 175 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKD 230

Query: 72  LIGQLLNTHADKR-----PTAGQLLQVAWFAEI 99
           L+ +L+     +R          +    WF E+
Sbjct: 231 LLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 8e-15
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 1/83 (1%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
               D+WS G++L  +L+G  P+   S+            ++       I      L+ +
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW-KKIDSAPLALLHK 242

Query: 76  LLNTHADKRPTAGQLLQVAWFAE 98
           +L  +   R T   + +  W+ +
Sbjct: 243 ILVENPSARITIPDIKKDRWYNK 265

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 2e-14
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
                  S D+++ G+ +  + +   P+ +           V     P           +
Sbjct: 185 YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR-VTSGVKPASFDKVAIPEVK 243

Query: 71  ELIGQLLNTHADKRPTAGQLLQVAWF 96
           E+I   +  + D+R +   LL  A+F
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 2e-14
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
            +  G + D W LGV++Y ++ G  PF ++  E     I + +  FP      +S  A+ 
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKS 234

Query: 72  LIGQLLNTHADKRP-----TAGQLLQVAWFAEI 99
           L+  LL     +R       A ++++  +F  I
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (161), Expect = 7e-14
 Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP--PEQCGHISVPARELI 73
              +D+++ G++LY L++G  P+ + +  +    +    Y  P   +   +     + L+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246

Query: 74  GQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
            + L    D+RP   Q+L        ++P
Sbjct: 247 AECLKKKRDERPLFPQILASIELLARSLP 275

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.7 bits (162), Expect = 8e-14
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
           G +   S D +SLG +L+ LL G SPF     ++    I     +   E     S   R 
Sbjct: 180 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRS 238

Query: 72  LIGQLLNTHADKRPT-----AGQLLQVAWFAEI 99
           L+  LL    ++R       A ++ +  +F  +
Sbjct: 239 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 1e-13
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC------------- 62
             + D+WS+G ++  LL+G + F      +    I     +   E               
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256

Query: 63  --------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKV 107
                            +  A +L+ ++L   +DKR TA Q L  A+FA+   P++  V
Sbjct: 257 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 315

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 1e-13
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 24/111 (21%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC------------- 62
           G   DMW++G +L  LL  V     +S+ +    I     +   EQ              
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238

Query: 63  -----------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
                              +LI  L   +   R TA Q L++ +F+    P
Sbjct: 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP 289

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 1e-13
 Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 23/112 (20%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC-------- 62
           L SS     D+WS+G +   +      F   S+ +    I         E          
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 63  ---------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
                            I    ++L+ + L  +  KR +A   L   +F ++
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 1e-13
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 28/119 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI---------- 65
           GP  D+W  G ++  + +        +E+   A IS    S  PE   ++          
Sbjct: 200 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 259

Query: 66  ------------------SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
                                A +LI +LL     +R  +   L   +F    +P++ K
Sbjct: 260 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLK 318

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 2e-13
 Identities = 20/116 (17%), Positives = 41/116 (35%), Gaps = 27/116 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG------------ 63
             + D+WS+G ++  +++G + F      +    I     + P E               
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256

Query: 64  ---------------HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNN 104
                          + S  A  L+ ++L   A++R TAG+ L   +F  +    +
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 312

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 3e-13
 Identities = 24/113 (21%), Positives = 34/113 (30%), Gaps = 25/113 (22%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC------------- 62
             S D+WS G +L  LL G   F  +S  +    I     +   EQ              
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFP 260

Query: 63  ------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPN 103
                             A  L  +LL      R T  +    ++F E+  PN
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 4e-13
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 25/112 (22%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ-------------- 61
             + D+WSLG +   +++  + F  +SE +    I     +                   
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240

Query: 62  -----------CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
                         +    R L+ Q+L+   +KR +A   L   +F ++  P
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 6e-13
 Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 27/127 (21%)

Query: 8   LIDLGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC----- 62
           ++        S D+WS+G +L  +LS    F  +   +   HI     S   E       
Sbjct: 183 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 242

Query: 63  ----------------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA 100
                                  +    A +L+ ++L  +  KR    Q L   +  +  
Sbjct: 243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 302

Query: 101 IPNNTKV 107
            P++  +
Sbjct: 303 DPSDEPI 309

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 63.4 bits (153), Expect = 9e-13
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 25/108 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC------------- 62
             + D+WS+G +   +++G   F   SE +    I     +   +               
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238

Query: 63  ------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 98
                         +     +L+ ++L    ++R TA Q L+ A+F E
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.9 bits (152), Expect = 2e-12
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
           L      + D W+LGVL+Y + +G  PF  +   +    I      FP     H S   +
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLK 266

Query: 71  ELIGQLLNTHADKR-----PTAGQLLQVAWFAEI 99
           +L+  LL     KR          +    WFA  
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (145), Expect = 8e-12
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 26/113 (23%)

Query: 16  GPSTDMWSLGVLLYILLSGVSP-FLDESEEETRAHISVADYSFPPEQC------------ 62
             S DMWS G +   L +   P F     ++    I     +   EQ             
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239

Query: 63  -------------GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP 102
                          ++   R+L+  LL  +  +R +A + LQ  +F++   P
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 19/142 (13%), Positives = 40/142 (28%), Gaps = 43/142 (30%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-------------------- 50
            G+     +D+WS+G+ L  +  G  P      +E                         
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235

Query: 51  --------------------SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL 90
                                + +   P    G  S+  ++ + + L  +  +R    QL
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

Query: 91  LQVAWFAEIAIPNNTKVNCLAW 112
           +  A+       +  +V+   W
Sbjct: 296 MVHAFIKRS---DAEEVDFAGW 314

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
                  +D+WS GVL++   S G  P+      E  A +   +    P  C        
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC---PREMY 240

Query: 71  ELIGQLLNTHADKRPTAGQLLQV--AWFAEIA 100
           +L+        + RP    +      ++ ++ 
Sbjct: 241 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 272

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 3/83 (3%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
              +   ++D W  GV L+ + + G  P++  +  +    I       P  +        
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE--DCPQDI 244

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
             ++ Q      + RPT   L  
Sbjct: 245 YNVMVQCWAHKPEDRPTFVALRD 267

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
            S     +D+W+ GVL++ + S G  P+   +  ET  HI+     + P      S    
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA---SEKVY 231

Query: 71  ELIGQLLNTHADKRPTAGQLLQ 92
            ++    +  AD+RPT   LL 
Sbjct: 232 TIMYSCWHEKADERPTFKILLS 253

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 4e-11
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
                   +D+WS G+LL+ + S G  P+     ++    +   +  +  +         
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV---EKGYKMDAPDGCPPAV 229

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
            E++    +  A  RP+  QL +
Sbjct: 230 YEVMKNCWHLDAAMRPSFLQLRE 252

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 8e-11
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 17  PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
             +D+WS GVLL+ L++ G  P+ D +  +   ++        PE C     P  E++ +
Sbjct: 213 TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC---PDPLYEVMLK 269

Query: 76  LLNTHADKRPTAGQLLQ 92
             +  A+ RP+  +L+ 
Sbjct: 270 CWHPKAEMRPSFSELVS 286

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 9e-11
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
           L       +D+WS G+LL  L + G  P+      E    +   +  +            
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV---ERGYRMPCPPECPESL 243

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
            +L+ Q      ++RPT   L  
Sbjct: 244 HDLMCQCWRKEPEERPTFEYLQA 266

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 1e-10
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
                   +D+WS GVLL+ + + G SP+     EE    +        P  C   +   
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC---TNEL 266

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
             ++    +    +RPT  QL++
Sbjct: 267 YMMMRDCWHAVPSQRPTFKQLVE 289

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.2 bits (137), Expect = 1e-10
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
             +     +D+W+ GV+L+ + S G+ P+   + EE   ++   +    PE C    +  
Sbjct: 215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC---PLEL 271

Query: 70  RELIGQLLNTHADKRPTAGQLLQV 93
             L+    +     RP+   + ++
Sbjct: 272 YNLMRLCWSKLPADRPSFCSIHRI 295

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 2e-10
 Identities = 19/87 (21%), Positives = 26/87 (29%), Gaps = 4/87 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI---SVADYSFPPEQ-CGHIS 66
           LG       D+ SLG +L     G  P+        R      S    S P E  C    
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245

Query: 67  VPARELIGQLLNTHADKRPTAGQLLQV 93
                 +    +   D +P    L Q+
Sbjct: 246 SEFATYLNFCRSLRFDDKPDYSYLRQL 272

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
             +    +D+WS G+LL  +++ G  P+   +  E   ++        P+ C        
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC---PEELY 240

Query: 71  ELIGQLLNTHADKRPTAGQLLQV 93
           +L+        + RPT   L  V
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSV 263

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
            S     +D+WS GVL++ + S G  P+ + S  E    IS     + P      S    
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVY 232

Query: 71  ELIGQLLNTHADKRPTAGQLLQ 92
           +++        + RP   +LL+
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLR 254

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
            S    ++D+WS GVLL+ ++S G +P+   +  E    +      +  E+  +      
Sbjct: 200 YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL---PQGYRLEKPLNCDDEVY 256

Query: 71  ELIGQLLNTHADKRPTAGQLLQ 92
           +L+ Q       +RP+  Q+L 
Sbjct: 257 DLMRQCWREKPYERPSFAQILV 278

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 6/100 (6%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA---HISVADYSFPPEQ-CGHIS 66
           LG       D+ +LG +    L G  P+        +     I     S P  + C    
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP 245

Query: 67  VPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTK 106
               + +    N   D  P    L  +  F+++    NT 
Sbjct: 246 EEFYKYMHYARNLAFDATPDYDYLQGL--FSKVLERLNTT 283

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.9 bits (134), Expect = 4e-10
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
                 ++D+WS G++++ ++S G  P+ D + ++    I   DY  PP           
Sbjct: 207 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPM--DCPSALH 263

Query: 71  ELIGQLLNTHADKRPTAGQLLQV 93
           +L+        + RP  GQ++  
Sbjct: 264 QLMLDCWQKDRNHRPKFGQIVNT 286

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.6 bits (132), Expect = 6e-10
 Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 12/82 (14%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           ++C AW++++  IA+  ++  + + +    K                  L+ H+G+V  +
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------------WVQVHELKEHNGQVTGV 57

Query: 167 IWNEQYEKLTSSDETGLIIVWM 188
            W     ++ +        VW 
Sbjct: 58  DWAPDSNRIVTCGTDRNAYVWT 79

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 8e-10
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 4/82 (4%)

Query: 12  GSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 70
                  +D+WS GV ++  LS G  P+      E  A I        P +C        
Sbjct: 186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC---PPELY 242

Query: 71  ELIGQLLNTHADKRPTAGQLLQ 92
            L+        + RP    + Q
Sbjct: 243 ALMSDCWIYKWEDRPDFLTVEQ 264

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
           L       +D+WS GV ++ L++ G  P+      E  + +   +    P  C   ++  
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC---TIDV 242

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
             ++ +     AD RP   +L+ 
Sbjct: 243 YMIMVKCWMIDADSRPKFRELII 265

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 3e-09
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
                   +D+WS G+LL+ + S GV+P+     +     +    +        + +   
Sbjct: 239 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF--YATEEI 296

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
             ++       + KRP+   L  
Sbjct: 297 YIIMQSCWAFDSRKRPSFPNLTS 319

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 7e-09
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 17  PSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
            ++D+W  GV ++ IL+ GV PF      +    I   +    P  C         L+ +
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC---PPTLYSLMTK 244

Query: 76  LLNTHADKRPTAGQLLQ 92
                  +RP   +L  
Sbjct: 245 CWAYDPSRRPRFTELKA 261

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 8e-09
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 17  PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
            ++D+WS G++++ +++ G  P+ + S  E    I   +  F             +L+ Q
Sbjct: 192 SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI---NDGFRLPTPMDCPSAIYQLMMQ 248

Query: 76  LLNTHADKRPTAGQLLQV 93
                  +RP    ++ +
Sbjct: 249 CWQQERARRPKFADIVSI 266

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 8e-09
 Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 38/135 (28%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE---------- 60
           LG     + D+WS+G ++  ++     F      +    +     +  PE          
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250

Query: 61  ----------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQ 92
                                            +  AR+L+ ++L     KR +    LQ
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310

Query: 93  VAWFAEIAIPNNTKV 107
             +      P   + 
Sbjct: 311 HPYINVWYDPAEVEA 325

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.3 bits (121), Expect = 2e-08
 Identities = 9/93 (9%), Positives = 24/93 (25%), Gaps = 14/93 (15%)

Query: 95  WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ 154
                       +  +++ ++   +  G DD    V        +               
Sbjct: 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA--------------G 306

Query: 155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
            L GH  +V  +   +    + +      + +W
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 75
              +D+W+ GVLL+ + +         +      +   DY     +         EL+  
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE--GCPEKVYELMRA 251

Query: 76  LLNTHADKRPTAGQLLQ 92
               +   RP+  ++ Q
Sbjct: 252 CWQWNPSDRPSFAEIHQ 268

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGV-SPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
                   +D+WS GV+L+ + +    P+   S E+    +        P+ C       
Sbjct: 208 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC---PDML 264

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
            EL+      +   RP+  +++ 
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIIS 287

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 4e-08
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 71
                  +D+WS G+ L+ L S  S        +++ +  +    F      H      +
Sbjct: 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-KMIKEGFRMLSPEHAPAEMYD 279

Query: 72  LIGQLLNTHADKRPTAGQLLQV 93
           ++    +    KRPT  Q++Q+
Sbjct: 280 IMKTCWDADPLKRPTFKQIVQL 301

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 5e-08
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 14/81 (17%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V  + +H    +I    DD  L+V      +                ++L  H   V ++
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM--------------KTLNAHEHFVTSL 295

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
            +++    + +      + VW
Sbjct: 296 DFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (96), Expect = 2e-05
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 14/66 (21%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V  + +H     +    +D  +KV   +TG                 ++L+GH+  V+ I
Sbjct: 20  VTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--------------RTLKGHTDSVQDI 65

Query: 167 IWNEQY 172
            ++   
Sbjct: 66  SFDHSG 71

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 14/93 (15%)

Query: 95  WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ 154
             +  +I   T        +   ++  G  D  +K+  + TG                  
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL--------------M 241

Query: 155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
           +L GH   VR ++++   + + S  +   + VW
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 274

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 5e-08
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 34/118 (28%)

Query: 16  GPSTDMWSLGVLLYILLSGVSPFLDESEE--------------ETRAHISVADYSFPP-- 59
             S DMWSLG +L  ++    PF    +               +   +I   +    P  
Sbjct: 208 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267

Query: 60  ------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI 99
                             E    +S  A + + +LL      R TA + ++  +F  +
Sbjct: 268 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 44/141 (31%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGVSPFLDES------EEETRAHISVADYSFPPEQ--- 61
           LG+  G   D+WS   L++ L++G   F  +       +++  A I       P      
Sbjct: 202 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 261

Query: 62  -----------------------------------CGHISVPARELIGQLLNTHADKRPT 86
                                                  +    + +  +L     KR  
Sbjct: 262 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 321

Query: 87  AGQLLQVAWFAEIAIPNNTKV 107
           AG L+   W  +       +V
Sbjct: 322 AGGLVNHPWLKDTLGMEEIRV 342

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 8e-07
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 11  LGSSAGPSTDMWSLGVLLYILLSGV-SPFLDESEEETRAHISVADYSFPPEQCGHISVPA 69
                   +D+WS GVLL+ + S   SP+     +E                  + +   
Sbjct: 209 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD--YTTPEM 266

Query: 70  RELIGQLLNTHADKRPTAGQLLQ 92
            + +    +    +RPT  +L++
Sbjct: 267 YQTMLDCWHGEPSQRPTFSELVE 289

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.2 bits (105), Expect = 2e-06
 Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 20/91 (21%)

Query: 103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK 162
           +   V  +A  QN  +I  G  D  +      +G                   LQGH   
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP--------------LLMLQGHRNS 352

Query: 163 VRAI------IWNEQYEKLTSSDETGLIIVW 187
           V ++          +Y    +        +W
Sbjct: 353 VISVAVANGSSLGPEYNVFATGSGDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.3 bits (95), Expect = 4e-05
 Identities = 11/81 (13%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V  + + ++   +  G  D  +K+  L      +      +       +  GH   V ++
Sbjct: 257 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT--CEVTYIGHKDFVLSV 314

Query: 167 IWNEQYEKLTSSDETGLIIVW 187
              +  E + S  +   ++ W
Sbjct: 315 ATTQNDEYILSGSKDRGVLFW 335

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.7 bits (101), Expect = 5e-06
 Identities = 9/95 (9%), Positives = 36/95 (37%), Gaps = 14/95 (14%)

Query: 95  WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ 154
            ++     ++T ++ +        I V G +    +  L +GK              ++ 
Sbjct: 272 DYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKL-------------VHA 318

Query: 155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWML 189
           ++   + ++ ++ +  +   + + ++ G   + +L
Sbjct: 319 NILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 2e-04
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 16/82 (19%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           + CL +  N  ++  G DD +++V      K                  L GH G V A+
Sbjct: 16  ITCLQFEDN--YVITGADDKMIRVYDSINKKFL--------------LQLSGHDGGVWAL 59

Query: 167 IWNEQYEKLTSSDETGLIIVWM 188
            +      ++ S +  + +  +
Sbjct: 60  KYAHGGILVSGSTDRTVRVWDI 81

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (96), Expect = 2e-05
 Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 7/98 (7%)

Query: 90  LLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVN 149
           L  +   A + +    +        +   I  G  DG +KV  L    +         + 
Sbjct: 202 LWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCL- 260

Query: 150 LAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
               ++L  HSG+V  + ++E    + SS     I++W
Sbjct: 261 ----RTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (88), Expect = 2e-04
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 16/66 (24%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           V CL +      I  G  D  +K+   +T +                + L GH+G V  +
Sbjct: 18  VYCLQYDDQ--KIVSGLRDNTIKIWDKNTLECK--------------RILTGHTGSVLCL 61

Query: 167 IWNEQY 172
            ++E+ 
Sbjct: 62  QYDERV 67

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 8/99 (8%), Positives = 29/99 (29%), Gaps = 18/99 (18%)

Query: 12  GSSAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-------------SVADYSFP 58
              +    D++++G++ + +    S      + +   +               V +    
Sbjct: 192 HFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR 251

Query: 59  PEQCGHISVP-----ARELIGQLLNTHADKRPTAGQLLQ 92
           P                +++ +    +   R TA ++ +
Sbjct: 252 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 2e-05
 Identities = 11/93 (11%), Positives = 21/93 (22%), Gaps = 15/93 (16%)

Query: 95  WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ 154
                   + + V  L +     W    G D LL   +   G                  
Sbjct: 256 PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---------------I 300

Query: 155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
                S  V +   +   + + +        V+
Sbjct: 301 FQSKESSSVLSCDISVDDKYIVTGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (81), Expect = 0.002
 Identities = 13/115 (11%), Positives = 26/115 (22%), Gaps = 10/115 (8%)

Query: 74  GQLLNTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 133
           GQ+           G  +         + +   V  +        +  GG  G +KV  +
Sbjct: 21  GQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDI 79

Query: 134 DTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWM 188
                 +                      +R+         L    E   + +W 
Sbjct: 80  SHPGNKSPVSQ---------LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.2 bits (92), Expect = 7e-05
 Identities = 6/69 (8%), Positives = 21/69 (30%), Gaps = 11/69 (15%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           ++ +    ++  + +   DG L V K D   ++   +               +   +   
Sbjct: 14  ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ-----------SLRYKHPLLCC 62

Query: 167 IWNEQYEKL 175
            + +  +  
Sbjct: 63  NFIDNTDLQ 71

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.0 bits (81), Expect = 0.002
 Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 15/85 (17%)

Query: 108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII 167
           N + +     ++   G DG++    L T K+             +    + +   V  I 
Sbjct: 255 NSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-------------IKNFAKFNEDSVVKIA 301

Query: 168 WNEQYEKLTSSDETGLIIVWMLYKE 192
            ++    L +SD+T          +
Sbjct: 302 CSDNILCLATSDDT--FKTNAAIDQ 324

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.0 bits (91), Expect = 9e-05
 Identities = 10/90 (11%), Positives = 24/90 (26%), Gaps = 13/90 (14%)

Query: 107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI 166
           +  L+   +   +     +G +    + TG                      H+  +  I
Sbjct: 15  ITALSSSADGKTLFSADAEGHINSWDISTGIS-------------NRVFPDVHATMITGI 61

Query: 167 IWNEQYEKLTSSDETGLIIVWMLYKEKNPQ 196
               + +  T S +  L +V       +  
Sbjct: 62  KTTSKGDLFTVSWDDHLKVVPAGGSGVDSS 91

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.3 bits (79), Expect = 0.003
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 151 AMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
           +++Q   GH+  + A+  +   + L S+D  G I  W
Sbjct: 3   SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSW 39

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (79), Expect = 0.003
 Identities = 10/93 (10%), Positives = 24/93 (25%), Gaps = 14/93 (15%)

Query: 95  WFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ 154
                      +         +  +A G  D  + +  +    +               +
Sbjct: 206 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII-------------K 252

Query: 155 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVW 187
           +L  H   V  ++W      ++S  +   I  W
Sbjct: 253 ALNAHKDGVNNLLWETPSTLVSSGAD-ACIKRW 284

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	205
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.92
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.91
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.9
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.9
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.9
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.89
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.89
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.89
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.89
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.89
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.87
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.87
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.87
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.87
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.86
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.85
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.83
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.83
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.82
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.82
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.82
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.82
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.82
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.81
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.81
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.81
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.81
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.8
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.8
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.79
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.79
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.79
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.78
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.78
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.78
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.77
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.77
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.76
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.76
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.76
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.76
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.73
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.71
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.71
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.67
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.6
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.57
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.57
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.52
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.5
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.49
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.45
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.42
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.41
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.41
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.39
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.36
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.36
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.35
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.34
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.33
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.33
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.3
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.29
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.28
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.26
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.25
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.24
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.22
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.21
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.1
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.02
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.0
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.94
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.93
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	98.91
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	98.89
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.85
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.84
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	98.83
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.77
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.76
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.45
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.44
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	98.43
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.37
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.29
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.24
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	98.13
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.07
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.06
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.04
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	97.99
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	97.88
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	97.69
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	97.67
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	97.5
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	96.58
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	95.48
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	95.47
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	95.36
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	95.28
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	94.69
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	94.37
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	93.33
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	92.76
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	91.55
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	89.56
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	89.47
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	87.85
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	86.57
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	82.35

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2e-25  Score=165.46  Aligned_cols=93  Identities=35%  Similarity=0.669  Sum_probs=86.1

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++|.+||+|||+|                           |+.++||||+||++|||++|++||.+.+..+.+..+.+..
T Consensus       141 ~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~  220 (263)
T d2j4za1         141 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE  220 (263)
T ss_dssp             TTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC
T ss_pred             CCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            4689999999999                           4899999999999999999999999999999999999888


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.+|.    .+++++++||.+||+.||++||++.++++||||..
T Consensus       221 ~~~p~----~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         221 FTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             CCCCc----cCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            77664    68999999999999999999999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=2.6e-25  Score=168.24  Aligned_cols=97  Identities=35%  Similarity=0.604  Sum_probs=87.6

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||+|                            |+.++||||+||++|||++|++||.+.+..++...+.+.
T Consensus       145 ~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~  224 (307)
T d1a06a_         145 EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA  224 (307)
T ss_dssp             TTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTT
T ss_pred             CCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhcc
Confidence            3689999999999                            499999999999999999999999999999999999998


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ...++...+..+++++++||.+||++||++||++.++++|||+..
T Consensus       225 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         225 EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             CCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            888877777789999999999999999999999999999999964

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.91  E-value=4.7e-25  Score=169.71  Aligned_cols=98  Identities=36%  Similarity=0.631  Sum_probs=91.3

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+||+|||+|                            |+.++||||+||++|+|++|.+||.+.+..+.+..|.+.
T Consensus       164 ~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~  243 (352)
T d1koba_         164 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC  243 (352)
T ss_dssp             TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC
T ss_pred             CCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            4689999999999                            489999999999999999999999999999999999998


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .+.++...+..+++++++||.+||++||.+||++.++++||||+..
T Consensus       244 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         244 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            8888877777899999999999999999999999999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=4.9e-25  Score=164.46  Aligned_cols=98  Identities=31%  Similarity=0.530  Sum_probs=89.7

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++++||+|||++                                  |+.++||||+||++|+|++|++||.+.+..+..
T Consensus       145 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~  224 (277)
T d1phka_         145 DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML  224 (277)
T ss_dssp             TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             CCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHH
Confidence            4789999999999                                  267899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+..+...++.....++|+++++||.+||+.+|++||++.++++||||++.
T Consensus       225 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         225 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            9999888877776667899999999999999999999999999999999753

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=162.65  Aligned_cols=95  Identities=28%  Similarity=0.550  Sum_probs=85.4

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i   50 (205)
                      ++|.+||+|||+|                               |+.++||||+||++|||++|++||.+.+..+++.+|
T Consensus       143 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i  222 (288)
T d1uu3a_         143 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI  222 (288)
T ss_dssp             TTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHH
Confidence            4689999999998                               488999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc------cccchhhhcc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL------LQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~------l~~~~~~~~~  100 (205)
                      .+..+.+|.    .+++++++||.+||++||.+||++.++      ++||||..+.
T Consensus       223 ~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         223 IKLEYDFPE----KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             HTTCCCCCT----TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             HcCCCCCCc----cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            988877764    689999999999999999999999985      6778887654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=8.9e-25  Score=168.02  Aligned_cols=99  Identities=38%  Similarity=0.610  Sum_probs=90.9

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      ++.+||+|||+|                            |+.++||||+||++|+|++|++||.+.+..+.+..|....
T Consensus       162 ~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~  241 (350)
T d1koaa2         162 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD  241 (350)
T ss_dssp             SCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            578999999998                            4889999999999999999999999999999999999988


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ..++...+..+++++++||.+||+.||++||++.++++|||+.....
T Consensus       242 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         242 WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             CCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred             CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            88777666789999999999999999999999999999999976543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.6e-24  Score=163.80  Aligned_cols=95  Identities=27%  Similarity=0.550  Sum_probs=87.2

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||+|                             |+.++||||+||++|||++|++||.+.+..+++..+..
T Consensus       140 ~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~  219 (337)
T d1o6la_         140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             TTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc
Confidence            4689999999999                             49999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      ..+.+|.    .+++++++||.+||++||.+|++     +.++++||||..+.
T Consensus       220 ~~~~~p~----~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~  268 (337)
T d1o6la_         220 EEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCCc----cCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCC
Confidence            8887775    68999999999999999999995     78999999997653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-24  Score=160.82  Aligned_cols=92  Identities=28%  Similarity=0.404  Sum_probs=83.0

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .++.+||+|||+|                             |+.++||||+||++|||++|++||.+.+..++...|..
T Consensus       149 ~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~  228 (269)
T d2java1         149 GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE  228 (269)
T ss_dssp             TTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence            4689999999998                             48999999999999999999999999999999999888


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF   96 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~   96 (205)
                      +.....   +..+++++++||.+||+.||.+||++.++++|||+
T Consensus       229 ~~~~~~---~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         229 GKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             TCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CCCCCC---CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            765432   23689999999999999999999999999999995

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.9e-24  Score=161.28  Aligned_cols=95  Identities=33%  Similarity=0.522  Sum_probs=86.8

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      ++|.+||+|||++                             |+.++||||+||++|||++|+.||.+.+..++...|..
T Consensus       138 ~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  217 (320)
T d1xjda_         138 KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM  217 (320)
T ss_dssp             TTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            4689999999999                             48999999999999999999999999999999999998


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcc-cccccchhhhcc
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAG-QLLQVAWFAEIA  100 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~l~~~~~~~~~  100 (205)
                      ..+.+|.    .+++++++||.+||+++|++||++. ++++||||..+.
T Consensus       218 ~~~~~p~----~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~  262 (320)
T d1xjda_         218 DNPFYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  262 (320)
T ss_dssp             CCCCCCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCCCCCc----cCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCC
Confidence            8877664    6899999999999999999999985 899999997753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=5.8e-24  Score=161.40  Aligned_cols=96  Identities=28%  Similarity=0.602  Sum_probs=87.8

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .+|.+||+|||+|                          |+.++||||+||++|+|++|+.||.+.+..+....|.++..
T Consensus       139 ~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~  218 (316)
T d1fota_         139 KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL  218 (316)
T ss_dssp             TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC
T ss_pred             CCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCC
Confidence            4689999999999                          48999999999999999999999999999999999999887


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhccc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIAI  101 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~~  101 (205)
                      .+|.    .++++++++|.+||.++|.+|+     ++.++++||||+.+.+
T Consensus       219 ~~p~----~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~  265 (316)
T d1fota_         219 RFPP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  265 (316)
T ss_dssp             CCCT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             CCCC----CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCH
Confidence            7765    6899999999999999999996     8999999999987643

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.8e-24  Score=160.14  Aligned_cols=96  Identities=26%  Similarity=0.462  Sum_probs=82.1

Q ss_pred             CCCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh
Q psy14043          2 NGAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISV   52 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~   52 (205)
                      .+|++||+|||+|                             |+.++||||+||++|+|++|++||.+.+..+.+..+..
T Consensus       151 ~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~  230 (293)
T d1yhwa1         151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT  230 (293)
T ss_dssp             TTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh
Confidence            4689999999998                             48999999999999999999999999888877777665


Q ss_pred             CCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         53 ADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .... ....+..+++++++||.+||+.||.+||++.++++||||+.
T Consensus       231 ~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         231 NGTP-ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             HCSC-CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCCC-CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            4332 11223468999999999999999999999999999999964

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-24  Score=160.43  Aligned_cols=96  Identities=24%  Similarity=0.282  Sum_probs=83.6

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .+|.+||+|||+|                                  |+.++||||+||++|||++|++||.+.+..+.+
T Consensus       145 ~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~  224 (288)
T d2jfla1         145 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL  224 (288)
T ss_dssp             TTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH
T ss_pred             CCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH
Confidence            4689999999998                                  267899999999999999999999998888888


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      ..+.+...... ..+..+++++++||.+||+.||++||++.++++|||+..
T Consensus       225 ~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         225 LKIAKSEPPTL-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             HHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             HHHHcCCCCCC-CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            88887754322 223468999999999999999999999999999999853

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=6.4e-24  Score=163.27  Aligned_cols=95  Identities=26%  Similarity=0.538  Sum_probs=86.7

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      .+|.+||+|||+|                          |+.++|||||||++|||++|++||.+.+..+++..|....+
T Consensus       176 ~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~  255 (350)
T d1rdqe_         176 QQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV  255 (350)
T ss_dssp             TTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC
Confidence            4789999999999                          48999999999999999999999999999999999998877


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCC-----Ccccccccchhhhcc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRP-----TAGQLLQVAWFAEIA  100 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~~~l~~~~~~~~~  100 (205)
                      .++.    .+++++.+||.+||.+||.+|+     ++.++++||||..+.
T Consensus       256 ~~p~----~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         256 RFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             CCCT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             CCCc----cCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCC
Confidence            6664    6899999999999999999995     899999999997654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-24  Score=162.29  Aligned_cols=96  Identities=41%  Similarity=0.689  Sum_probs=88.1

Q ss_pred             CeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC
Q psy14043          4 AVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY   55 (205)
Q Consensus         4 ~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~~   55 (205)
                      ..+|++|||+|                            |+.++||||+||++|||++|++||.+.+..+.+..+.....
T Consensus       154 ~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~  233 (293)
T d1jksa_         154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY  233 (293)
T ss_dssp             CCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC
T ss_pred             cceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC
Confidence            46999999999                            38999999999999999999999999999999999999888


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      .++...+..+++++++||.+||+.||++||++.++++||||+..
T Consensus       234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             CCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            77766666899999999999999999999999999999999764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-24  Score=164.15  Aligned_cols=96  Identities=38%  Similarity=0.725  Sum_probs=89.2

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .+.+||+|||++                            |+.++||||+||++|+|++|.+||.+.+..+.+..|.+..
T Consensus       140 ~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~  219 (321)
T d1tkia_         140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE  219 (321)
T ss_dssp             CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             ceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            457999999999                            3899999999999999999999999999999999999988


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      +.++...+..+++++++||.+||.+||++||++.++++|||+..
T Consensus       220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             CCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            88877666789999999999999999999999999999999965

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.1e-24  Score=156.97  Aligned_cols=93  Identities=18%  Similarity=0.289  Sum_probs=78.0

Q ss_pred             CCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhCCC
Q psy14043          3 GAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHISVADY   55 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i~~~~~   55 (205)
                      ++.+||+|||+|                          |+.++||||+||++|||++|++||.+.. ..++...+..+..
T Consensus       151 ~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~  230 (270)
T d1t4ha_         151 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK  230 (270)
T ss_dssp             TSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC
T ss_pred             CCCEEEeecCcceeccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC
Confidence            689999999999                          4999999999999999999999998654 4455666655433


Q ss_pred             CCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         56 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        56 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                        +.......++++++||.+||+.+|++||++.|+++||||+
T Consensus       231 --~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         231 --PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             --CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             --CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence              2223346899999999999999999999999999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=2.4e-23  Score=157.48  Aligned_cols=96  Identities=25%  Similarity=0.359  Sum_probs=83.8

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||+|                            |+.++||||+||++|||++|.+||.+.+..+.+..+...
T Consensus       150 ~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~  229 (309)
T d1u5ra_         150 EPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  229 (309)
T ss_dssp             TTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             CCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            4689999999999                            367899999999999999999999998888888888776


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ......  ...+++++++||.+||+.||.+||++.++++|||+...
T Consensus       230 ~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         230 ESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             CCCCCS--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             CCCCCC--CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence            553332  24689999999999999999999999999999999653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.5e-23  Score=158.14  Aligned_cols=101  Identities=28%  Similarity=0.314  Sum_probs=83.0

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      +++.+||+|||+|                              |+.++||||+||++|||++|.+||.+.+..+++..|.
T Consensus       135 ~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~  214 (299)
T d1ua2a_         135 ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF  214 (299)
T ss_dssp             TTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHH
Confidence            4689999999998                              3889999999999999999999999999988888776


Q ss_pred             hCCCCCCCC------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         52 VADYSFPPE------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        52 ~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      +.....+..                        ....+++++++||.+||+.||++||++.|+++||||++...+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         215 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  289 (299)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             HhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCC
Confidence            431111100                        113568999999999999999999999999999999876543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-23  Score=155.96  Aligned_cols=95  Identities=20%  Similarity=0.353  Sum_probs=76.0

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEE-TRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~-~~~   48 (205)
                      +++.+||+|||+|                                ++.++||||+||++|||++|++||.+..... ...
T Consensus       138 ~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~  217 (271)
T d1nvra_         138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS  217 (271)
T ss_dssp             TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHH
T ss_pred             CCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            4689999999999                                1567999999999999999999998765433 333


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .+.......+  .+..+++++++||.+||+.||++||++.++++||||++
T Consensus       218 ~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         218 DWKEKKTYLN--PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             HHHTTCTTST--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHhcCCCCCC--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence            3333322222  23468999999999999999999999999999999965

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=2e-23  Score=161.29  Aligned_cols=98  Identities=24%  Similarity=0.397  Sum_probs=77.4

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .+|.+||+|||+|                            |+.++||||+||++|||++|++||.+.+..+...... .
T Consensus       142 ~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~-~  220 (364)
T d1omwa3         142 EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-M  220 (364)
T ss_dssp             SSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHH-H
T ss_pred             CCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-h
Confidence            4689999999999                            4889999999999999999999998754433322222 1


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      ....+...+..+++++++||.+||++||.+||+     +.++++||||+.+.
T Consensus       221 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         221 TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             SSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred             cccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCC
Confidence            222222333479999999999999999999998     68999999998754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.7e-23  Score=154.03  Aligned_cols=99  Identities=19%  Similarity=0.264  Sum_probs=82.5

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||++                            |+.++||||+||++|||++|++||.+.+..+.+..+.+.
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~  230 (305)
T d1blxa_         151 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV  230 (305)
T ss_dssp             TTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence            4589999999998                            499999999999999999999999999988887777542


Q ss_pred             CCCC-----------------------CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         54 DYSF-----------------------PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        54 ~~~~-----------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ....                       .......+++++++||.+||++||++||++.++++||||+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         231 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             hCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            1100                       0012245789999999999999999999999999999998764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6e-23  Score=152.87  Aligned_cols=90  Identities=33%  Similarity=0.592  Sum_probs=76.6

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      +++.+||+|||+|                            ++.++||||+||++|||++|+.||.+.      ..+.++
T Consensus       146 ~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~  219 (273)
T d1xwsa_         146 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRG  219 (273)
T ss_dssp             TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHC
T ss_pred             CCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhc
Confidence            3579999999999                            256799999999999999999999753      235555


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      ...++.    .+|+++++||.+||+.||++||++.++++|||++++..
T Consensus       220 ~~~~~~----~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         220 QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  263 (273)
T ss_dssp             CCCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             ccCCCC----CCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence            555554    68999999999999999999999999999999987654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.2e-23  Score=160.89  Aligned_cols=97  Identities=35%  Similarity=0.645  Sum_probs=79.3

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHH
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR----AHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~----~~i   50 (205)
                      ++.+||+|||+|                            |+.++|||||||++|+|++|++||.+.+..+..    ..+
T Consensus       150 ~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i  229 (335)
T d2ozaa1         150 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI  229 (335)
T ss_dssp             TCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CC
T ss_pred             cccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHH
Confidence            578999999999                            489999999999999999999999876544433    334


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ....+.+|...+..+++++++||.+||+.||++||++.++++|||+...
T Consensus       230 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         230 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             CSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             hcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence            4455556655555689999999999999999999999999999999653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.8e-22  Score=153.64  Aligned_cols=97  Identities=23%  Similarity=0.338  Sum_probs=74.5

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR-------   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~-------   47 (205)
                      .+|++||+|||+|                           |+.++||||+||++|||++|+.||.+.+..+..       
T Consensus       140 ~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~  219 (322)
T d1s9ja_         140 SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV  219 (322)
T ss_dssp             TTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----
T ss_pred             CCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence            4689999999999                           599999999999999999999999765432211       


Q ss_pred             -----------------------------------HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         48 -----------------------------------AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        48 -----------------------------------~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                                                         ..+....+  +......+++++++||.+||+.||.+||++.++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             --------------------------CCCCHHHHHHHHHTSCC--CCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCcccCCcccccccccccccccccccchhHHHHHhhhhccCC--ccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                                               11111111  11111246899999999999999999999999999


Q ss_pred             cchhhhcc
Q psy14043         93 VAWFAEIA  100 (205)
Q Consensus        93 ~~~~~~~~  100 (205)
                      |||++...
T Consensus       298 Hpf~~~~~  305 (322)
T d1s9ja_         298 HAFIKRSD  305 (322)
T ss_dssp             SHHHHHHH
T ss_pred             CHhhCcCC
Confidence            99997643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-23  Score=158.51  Aligned_cols=99  Identities=34%  Similarity=0.517  Sum_probs=76.8

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      .+|.+||+|||+|                                ++.++||||+||++|+|++|+.||.+.+..+....
T Consensus       164 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~  243 (322)
T d1vzoa_         164 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE  243 (322)
T ss_dssp             TTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH
T ss_pred             CCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            3688999999998                                27789999999999999999999987654443333


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCC-----cccccccchhhhcc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT-----AGQLLQVAWFAEIA  100 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~~~~~~~~~  100 (205)
                      +.+.........+..+++++++||.+||.++|.+|++     +.|+++||||+.+.
T Consensus       244 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         244 ISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence            3332222222223368999999999999999999994     78999999997654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-22  Score=152.31  Aligned_cols=101  Identities=23%  Similarity=0.348  Sum_probs=82.3

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+||+|||.|                              ++.++|+||+||++|+|++|+.||.+.+..+.+..+.
T Consensus       137 ~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~  216 (298)
T d1gz8a_         137 TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF  216 (298)
T ss_dssp             TTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHH
Confidence            4678999999999                              2789999999999999999999999988888777765


Q ss_pred             hCCCCCCCC-------------------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccC
Q psy14043         52 VADYSFPPE-------------------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIP  102 (205)
Q Consensus        52 ~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~  102 (205)
                      +........                         ....+++++++||.+||..||.+||++.++++||||+++..|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         217 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            421111100                         112568999999999999999999999999999999887544

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.86  E-value=2.1e-22  Score=150.92  Aligned_cols=97  Identities=24%  Similarity=0.345  Sum_probs=79.8

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS   51 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~   51 (205)
                      .++.+|++|||.|                              ++.++||||+||++|||++|++||.+.+..+.+.++.
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~  214 (286)
T d1ob3a_         135 REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF  214 (286)
T ss_dssp             TTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            4689999999998                              3899999999999999999999999988887777764


Q ss_pred             hCCCCCC-------------------------CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhh
Q psy14043         52 VADYSFP-------------------------PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE   98 (205)
Q Consensus        52 ~~~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~   98 (205)
                      .......                         ......+++++++||.+||+.||++||++.++++||||++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            3211100                         0112357899999999999999999999999999999963

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.9e-22  Score=150.97  Aligned_cols=100  Identities=26%  Similarity=0.350  Sum_probs=81.5

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      .++.+||+|||++                                  |+.++||||+||++|||++|++||.+.+..+..
T Consensus       152 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~  231 (318)
T d3blha1         152 RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL  231 (318)
T ss_dssp             TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHH
Confidence            4689999999998                                  378999999999999999999999998888877


Q ss_pred             HHHHhCCCCCCCCcCCC----------------------------CCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         48 AHISVADYSFPPEQCGH----------------------------ISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                      ..+.+....++......                            .++++++||.+||+.||++|+++.++++||||+..
T Consensus       232 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         232 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             HHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             HHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            77765433322221111                            36788999999999999999999999999999864


Q ss_pred             cc
Q psy14043        100 AI  101 (205)
Q Consensus       100 ~~  101 (205)
                      ..
T Consensus       312 p~  313 (318)
T d3blha1         312 PM  313 (318)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1e-21  Score=151.09  Aligned_cols=98  Identities=31%  Similarity=0.383  Sum_probs=80.3

Q ss_pred             CeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-
Q psy14043          4 AVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA-   53 (205)
Q Consensus         4 ~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~-   53 (205)
                      ..+||+|||++                             |+.++||||+||++|||++|++||.+.+..+.+..+.+. 
T Consensus       160 ~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~  239 (350)
T d1q5ka_         160 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL  239 (350)
T ss_dssp             CCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH
T ss_pred             CceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHh
Confidence            48999999998                             489999999999999999999999988887777766431 


Q ss_pred             ----------------CCCCCC--------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         54 ----------------DYSFPP--------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        54 ----------------~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                                      ...++.        ......++++.+||.+||+.||.+||++.|+++||||..+..
T Consensus       240 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         240 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             CCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             CCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence                            011111        112357899999999999999999999999999999987644

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.5e-21  Score=147.42  Aligned_cols=90  Identities=21%  Similarity=0.355  Sum_probs=75.8

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+||+|||+|                               |+.++||||+||++|||++ |.+||.+.+..+.+..
T Consensus       199 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~  278 (325)
T d1rjba_         199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK  278 (325)
T ss_dssp             TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            4689999999998                               4999999999999999998 8999998776666666


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      +......++.  +..+++++++||.+||+.+|++||++.++++|
T Consensus       279 ~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         279 LIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            6655443332  34689999999999999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.1e-21  Score=146.92  Aligned_cols=99  Identities=22%  Similarity=0.367  Sum_probs=80.9

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++.+|++|||+|                           ++.++||||+||++|+|++|++||.+.+..+.+..+....
T Consensus       156 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~  235 (346)
T d1cm8a_         156 EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT  235 (346)
T ss_dssp             TTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             cccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhcc
Confidence            4789999999999                           2789999999999999999999999888777665554321


Q ss_pred             CCC-----------------------C----CCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         55 YSF-----------------------P----PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        55 ~~~-----------------------~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      ...                       .    ......+++++++||.+||..||++||++.++++||||..+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         236 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             CCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            111                       1    112246799999999999999999999999999999998764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.9e-21  Score=142.53  Aligned_cols=92  Identities=20%  Similarity=0.349  Sum_probs=73.7

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~   47 (205)
                      +++++||+|||+|                                  |+.++||||+||++|||++|+.||.+.+.....
T Consensus       139 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~  218 (276)
T d1uwha_         139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI  218 (276)
T ss_dssp             TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred             CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHH
Confidence            4689999999998                                  267899999999999999999999987665544


Q ss_pred             H-HHHhCCCCC-CCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 A-HISVADYSF-PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~-~i~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      . .+.++.... ......++++++++||.+||..+|++||++.+++++
T Consensus       219 ~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         219 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            4 444433221 123345789999999999999999999999999876

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=7.3e-21  Score=145.99  Aligned_cols=101  Identities=25%  Similarity=0.308  Sum_probs=80.0

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||+|                                 |+.++||||+||++|+|++|++||.+.+..+...
T Consensus       144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~  223 (345)
T d1pmea_         144 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN  223 (345)
T ss_dssp             TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHH
Confidence            4689999999998                                 3889999999999999999999999887766555


Q ss_pred             HHHhCCCC--------------------CCC-------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhccc
Q psy14043         49 HISVADYS--------------------FPP-------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAI  101 (205)
Q Consensus        49 ~i~~~~~~--------------------~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~  101 (205)
                      .+......                    .+.       .....+++++++||.+||+.||.+||++.++++|||+.....
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         224 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence            44321100                    000       122467899999999999999999999999999999986544


Q ss_pred             C
Q psy14043        102 P  102 (205)
Q Consensus       102 ~  102 (205)
                      +
T Consensus       304 ~  304 (345)
T d1pmea_         304 P  304 (345)
T ss_dssp             G
T ss_pred             C
Confidence            3

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5e-21  Score=147.05  Aligned_cols=103  Identities=26%  Similarity=0.346  Sum_probs=81.1

Q ss_pred             CCCeEEEEecCCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS---------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .+|.+|++|||+|                           ++.++||||+||++|+|++|++||.+.+.......+....
T Consensus       156 ~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~  235 (348)
T d2gfsa1         156 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV  235 (348)
T ss_dssp             TTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             ccccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            4688999999998                           2889999999999999999999999988887777765432


Q ss_pred             CCCCC---------------------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcccCCC
Q psy14043         55 YSFPP---------------------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIAIPNN  104 (205)
Q Consensus        55 ~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  104 (205)
                      ...+.                           .....+++++++||.+||..||.+|+++.++++||||.....+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~  312 (348)
T d2gfsa1         236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD  312 (348)
T ss_dssp             CCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred             CCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCcc
Confidence            21110                           012357899999999999999999999999999999987654433

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.8e-20  Score=140.51  Aligned_cols=99  Identities=22%  Similarity=0.328  Sum_probs=77.5

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCCCC-CCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVSPF-LDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~pf-~~~~~~~~~~~i   50 (205)
                      .++.+||+|||.|                              ++.++||||+||++|||++|+.|| .+.+..+.+..+
T Consensus       136 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~  215 (292)
T d1unla_         136 RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI  215 (292)
T ss_dssp             TTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHH
T ss_pred             cCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHH
Confidence            3678999999999                              278999999999999999998885 455666666665


Q ss_pred             HhCCCCC-------------------------CCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhcc
Q psy14043         51 SVADYSF-------------------------PPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEIA  100 (205)
Q Consensus        51 ~~~~~~~-------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~~  100 (205)
                      .......                         .......+++++++||.+||+.||.+||++.|+++||||.+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         216 FRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             HhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            4321110                         0112235789999999999999999999999999999997653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=7.2e-21  Score=142.22  Aligned_cols=92  Identities=22%  Similarity=0.294  Sum_probs=78.4

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||+|                                |+.++||||+||++|||++ |.+||.+.+..++..
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~  223 (285)
T d1u59a_         144 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA  223 (285)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH
T ss_pred             cCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            3689999999998                                3889999999999999998 999999988888888


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccc---cccchh
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL---LQVAWF   96 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~---l~~~~~   96 (205)
                      .|.++.....   +..+++++++||.+||+.+|++||++.++   ++++|+
T Consensus       224 ~i~~~~~~~~---p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         224 FIEQGKRMEC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCC---CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            8887654222   23689999999999999999999999887   456665

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.4e-20  Score=138.74  Aligned_cols=89  Identities=29%  Similarity=0.455  Sum_probs=78.5

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||++                              |+.++||||+||++|||++ |+.||.+.+..++...+
T Consensus       135 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i  214 (258)
T d1k2pa_         135 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI  214 (258)
T ss_dssp             TTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH
T ss_pred             CCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHH
Confidence            4689999999998                              3889999999999999998 89999999999999988


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .++.....+   ...++++++||.+||+.+|++||++.++++|
T Consensus       215 ~~~~~~~~p---~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         215 AQGLRLYRP---HLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCc---ccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            876543332   3689999999999999999999999999886

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.2e-20  Score=140.56  Aligned_cols=91  Identities=20%  Similarity=0.310  Sum_probs=77.6

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||+|                                |+.++||||+||++|||++ |++||.+.+..++...
T Consensus       143 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~  222 (277)
T d1xbba_         143 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  222 (277)
T ss_dssp             TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             cCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHH
Confidence            688999999998                                3889999999999999998 8999999998888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc---ccchh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLL---QVAWF   96 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l---~~~~~   96 (205)
                      +.++....   .+..+++++++||.+||+.+|++||++.++.   +++|+
T Consensus       223 i~~~~~~~---~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         223 LEKGERMG---CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHTTCCCC---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCCC---CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            88754322   2236899999999999999999999998874   55554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.3e-21  Score=141.20  Aligned_cols=88  Identities=22%  Similarity=0.340  Sum_probs=73.5

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||+|                              |+.++||||+||++|||++ |.+||.+.+..++...+.
T Consensus       144 ~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~  223 (273)
T d1mp8a_         144 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  223 (273)
T ss_dssp             TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             CCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            588999999998                              4889999999999999998 899999998888888888


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+...   +.+.++++++++||.+||..+|++||++.+++++
T Consensus       224 ~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         224 NGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             TTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            76532   1234789999999999999999999999999876

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.7e-20  Score=141.12  Aligned_cols=89  Identities=22%  Similarity=0.405  Sum_probs=74.2

Q ss_pred             CCCeEEEEecCCC----------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHH
Q psy14043          2 NGAVLKLIDLGSS----------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEET   46 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~   46 (205)
                      +++++||+|||+|                                  |+.++|||||||++|||++ |.+||.+.+..++
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~  242 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV  242 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence            4689999999998                                  3888999999999999998 8999999999888


Q ss_pred             HHHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         47 RAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        47 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ...+.++.....   +..+++++++||.+||+.+|++||++.++++.
T Consensus       243 ~~~i~~~~~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         243 INAIEQDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCCCCC---CccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            888877543222   23689999999999999999999999998765

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.4e-20  Score=138.57  Aligned_cols=93  Identities=19%  Similarity=0.312  Sum_probs=77.9

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||+|                              |+.++||||+||++|||+| |.+||...+..+....+
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i  223 (272)
T d1qpca_         144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL  223 (272)
T ss_dssp             TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             cccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            4689999999999                              3899999999999999999 56677777888888888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc--cchhh
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ--VAWFA   97 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~--~~~~~   97 (205)
                      ..+.....   +..+++++++||.+||+.+|++||++.++++  ++||.
T Consensus       224 ~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         224 ERGYRMVR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhcCCCCC---cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            77543222   2468999999999999999999999999987  56654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3e-20  Score=137.36  Aligned_cols=88  Identities=26%  Similarity=0.496  Sum_probs=74.4

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||+|                              |+.++||||+||++|||++ |.+||...+..++...+.
T Consensus       137 ~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~  216 (263)
T d1sm2a_         137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS  216 (263)
T ss_dssp             GGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH
T ss_pred             CCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            578999999998                              3889999999999999999 688888888888888888


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+.....+   ...++++++||.+||+.+|++||++.+++++
T Consensus       217 ~~~~~~~p---~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         217 TGFRLYKP---RLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCCc---cccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            76443322   3679999999999999999999999999876

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4e-20  Score=137.40  Aligned_cols=88  Identities=19%  Similarity=0.325  Sum_probs=76.9

Q ss_pred             CCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          3 GAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         3 ~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      ++.+||+|||++                                ++.++||||+||++|||++ |.+||.+.+..+....
T Consensus       147 ~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~  226 (273)
T d1u46a_         147 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK  226 (273)
T ss_dssp             TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH
T ss_pred             ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHH
Confidence            578999999998                                2778999999999999998 8999999999999999


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.+....++.  +..+++++++||.+||..+|++||++.++.+
T Consensus       227 i~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         227 IDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHTSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8876554432  3478999999999999999999999998853

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.79  E-value=6.7e-20  Score=136.51  Aligned_cols=96  Identities=20%  Similarity=0.331  Sum_probs=81.9

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~   49 (205)
                      .++.+|++|||.+                                |+.++||||+||++|||++|++||.+.+..+.+..
T Consensus       146 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~  225 (277)
T d1o6ya_         146 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ  225 (277)
T ss_dssp             TTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHH
Confidence            4678899999987                                48899999999999999999999999999888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhh
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA   97 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~   97 (205)
                      +.+..+..+......+|+++++||.+||++||.+||+..+.+.+.|.+
T Consensus       226 ~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         226 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             HHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            887776666566678999999999999999999999655555566653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=6.1e-20  Score=138.26  Aligned_cols=87  Identities=20%  Similarity=0.319  Sum_probs=75.6

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSG-VSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g-~~pf~~~~~~~~~~~i   50 (205)
                      ++++||+|||+|                               |+.++||||+||++|||++| .+||.+.+..+....+
T Consensus       176 ~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v  255 (301)
T d1lufa_         176 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV  255 (301)
T ss_dssp             GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHH
Confidence            578999999998                               48899999999999999998 5789999999999888


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+....   .+..+++++.+||.+||+.+|++||++.++.+
T Consensus       256 ~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         256 RDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8765432   23468999999999999999999999999854

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.79  E-value=5.9e-20  Score=139.96  Aligned_cols=98  Identities=26%  Similarity=0.384  Sum_probs=74.2

Q ss_pred             CCeEEEEecCCC-----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHh
Q psy14043          3 GAVLKLIDLGSS-----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDES-EEETRAHISV   52 (205)
Q Consensus         3 ~~~~kl~Dfg~~-----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~-~~~~~~~i~~   52 (205)
                      ++.+||+|||+|                             |+.++||||+||++|+|++|+.||.... ..+....+..
T Consensus       166 ~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~  245 (328)
T d3bqca1         166 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK  245 (328)
T ss_dssp             TTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred             CCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHH
Confidence            457999999998                             3888999999999999999999997543 3333332211


Q ss_pred             -------------CCCC--------------------CCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccchhhhc
Q psy14043         53 -------------ADYS--------------------FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEI   99 (205)
Q Consensus        53 -------------~~~~--------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~~~~~   99 (205)
                                   ....                    .+......+++++++||.+||.+||.+|+++.++++||||+.+
T Consensus       246 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         246 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             HHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             HHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence                         0000                    0111123478999999999999999999999999999999876


Q ss_pred             c
Q psy14043        100 A  100 (205)
Q Consensus       100 ~  100 (205)
                      .
T Consensus       326 ~  326 (328)
T d3bqca1         326 V  326 (328)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6.9e-20  Score=138.94  Aligned_cols=89  Identities=19%  Similarity=0.288  Sum_probs=76.9

Q ss_pred             CCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHI   50 (205)
Q Consensus         3 ~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i   50 (205)
                      ++++||+|||+|                               |+.++||||+||++|||+| |.+||.+.+..++...+
T Consensus       147 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i  226 (317)
T d1xkka_         147 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL  226 (317)
T ss_dssp             TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH
T ss_pred             CCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            679999999998                               4899999999999999998 89999988888888887


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                      ..+.....   +..+++++++|+.+||..+|.+||++.+++++.
T Consensus       227 ~~~~~~~~---p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         227 EKGERLPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             HHTCCCCC---CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HcCCCCCC---CcccCHHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence            77553211   236899999999999999999999999998873

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6e-20  Score=138.19  Aligned_cols=89  Identities=21%  Similarity=0.328  Sum_probs=67.4

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcC-CCCCCCCCHHH-HHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSG-VSPFLDESEEE-TRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g-~~pf~~~~~~~-~~~   48 (205)
                      +++++||+|||+|                               |+.++||||+||++|||++| .+||.+....+ ...
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~  248 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  248 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3588999999998                               38999999999999999986 67888765444 444


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      .+..+.. +  ..+..+++++++||.+||+.+|++||++.++++|
T Consensus       249 ~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         249 RLKEGTR-M--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCC-C--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4444332 1  2224689999999999999999999999999986

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.7e-19  Score=134.85  Aligned_cols=88  Identities=19%  Similarity=0.291  Sum_probs=70.8

Q ss_pred             CCCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHcCCC-CCCCCCHHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLSGVS-PFLDESEEETRAHI   50 (205)
Q Consensus         2 ~~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~g~~-pf~~~~~~~~~~~i   50 (205)
                      +++.+||+|||+|                              |+.++||||+||++|||++|.. ||.+.+..++...+
T Consensus       150 ~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i  229 (287)
T d1opja_         150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  229 (287)
T ss_dssp             GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             CCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH
Confidence            3578999999999                              4899999999999999999655 55566666666666


Q ss_pred             HhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         51 SVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      ..+.. .  ..+..+++++++||.+||+.+|++||++.++++
T Consensus       230 ~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         230 EKDYR-M--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HTTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcCCC-C--CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            55422 1  223468999999999999999999999999865

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.3e-19  Score=133.09  Aligned_cols=93  Identities=23%  Similarity=0.325  Sum_probs=76.9

Q ss_pred             CCeEEEEecCCC------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH
Q psy14043          3 GAVLKLIDLGSS------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHIS   51 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~   51 (205)
                      ++.+||+|||+|                              ++.++||||+||++|||++ |.+||.+....+.+..+.
T Consensus       149 ~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~  228 (285)
T d1fmka3         149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE  228 (285)
T ss_dssp             GGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             CCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            578999999998                              3999999999999999999 566667778888888887


Q ss_pred             hCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc--cchhhh
Q psy14043         52 VADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ--VAWFAE   98 (205)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~--~~~~~~   98 (205)
                      ++...   +....+++++++||.+||+.+|++||++.++++  ++|+..
T Consensus       229 ~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         229 RGYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             TTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             hcCCC---CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            65322   123478999999999999999999999999876  566644

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.8e-19  Score=131.96  Aligned_cols=89  Identities=21%  Similarity=0.327  Sum_probs=75.4

Q ss_pred             CCCeEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC
Q psy14043          2 NGAVLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD   54 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~i~~~~   54 (205)
                      .++++||+|||++                          ++.++|||||||++|||++ |++||...+..++...|.++.
T Consensus       138 ~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~  217 (262)
T d1byga_         138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY  217 (262)
T ss_dssp             TTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC
T ss_pred             CCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC
Confidence            4688999999999                          4899999999999999998 899999888888888887643


Q ss_pred             CCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         55 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        55 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..   +.+..+++++++||.+||..||.+||++.+++++
T Consensus       218 ~~---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         218 KM---DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CC---CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            21   1233689999999999999999999999998764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.7e-19  Score=131.79  Aligned_cols=88  Identities=22%  Similarity=0.385  Sum_probs=72.1

Q ss_pred             CCCeEEEEecCCC--------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHH
Q psy14043          2 NGAVLKLIDLGSS--------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRA   48 (205)
Q Consensus         2 ~~~~~kl~Dfg~~--------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~   48 (205)
                      +++.+||+|||+|                                |+.++||||+||++|||++ |.+||.+.+..+++.
T Consensus       145 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~  224 (283)
T d1mqba_         145 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK  224 (283)
T ss_dssp             TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHH
Confidence            4689999999998                                3889999999999999999 466666677777877


Q ss_pred             HHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         49 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        49 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      .+..+... +  .+..+++++++||.+||..+|++||++.++++
T Consensus       225 ~i~~~~~~-~--~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         225 AINDGFRL-P--TPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHTTCCC-C--CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhccCCC-C--CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            77765332 1  22368999999999999999999999999876

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.3e-19  Score=135.50  Aligned_cols=88  Identities=25%  Similarity=0.326  Sum_probs=75.7

Q ss_pred             CCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhC
Q psy14043          3 GAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSG-VSPFLDESEEETRAHISVA   53 (205)
Q Consensus         3 ~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g-~~pf~~~~~~~~~~~i~~~   53 (205)
                      ++.+||+|||+|                            |+.++|||||||++|||++| .+||.+.+..++...+.++
T Consensus       163 ~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~  242 (309)
T d1fvra_         163 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  242 (309)
T ss_dssp             GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred             CCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc
Confidence            578999999998                            38999999999999999996 5689888998888888765


Q ss_pred             CCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         54 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ...   ..+..+++++++||.+||..+|++||++.+++++
T Consensus       243 ~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         243 YRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            322   2234689999999999999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.6e-19  Score=132.41  Aligned_cols=88  Identities=24%  Similarity=0.402  Sum_probs=76.2

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      +++.+||+|||++                               |+.++|||||||++|||++ |.+||.+.+..++...
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~  249 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  249 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH
Confidence            4688999999998                               4999999999999999998 7999999888888888


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +..+...   ..+..+++++++||.+||+.+|++||++.++++
T Consensus       250 i~~~~~~---~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         250 LKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHTTCCC---CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCC---CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            7765332   223468999999999999999999999999876

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=7.2e-19  Score=132.74  Aligned_cols=88  Identities=18%  Similarity=0.249  Sum_probs=76.5

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLSG-VSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~g-~~pf~~~~~~~~~~~   49 (205)
                      .++++||+|||+|                               ++.++||||+||++|||++| .+||.+.+..+.+..
T Consensus       168 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~  247 (308)
T d1p4oa_         168 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF  247 (308)
T ss_dssp             TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH
T ss_pred             CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            4678999999999                               38899999999999999997 689999999999988


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +.++.....   +..+++.+.++|.+||+.+|++||++.++++
T Consensus       248 i~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         248 VMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCC---cccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            887654222   2368999999999999999999999999887

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.3e-19  Score=136.49  Aligned_cols=98  Identities=17%  Similarity=0.264  Sum_probs=76.1

Q ss_pred             CCCeEEEEecCCC----------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Q psy14043          2 NGAVLKLIDLGSS----------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA   53 (205)
Q Consensus         2 ~~~~~kl~Dfg~~----------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~~~   53 (205)
                      .++.+|++|||++                            ++.++||||+||++|+|++|++||.+.+.......+...
T Consensus       154 ~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~  233 (355)
T d2b1pa1         154 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ  233 (355)
T ss_dssp             TTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHh
Confidence            3678999999987                            389999999999999999999999988877766655421


Q ss_pred             CCC----------------------CCCC----------------cCCCCCHHHHHHHHHhcccCcCCCCCcccccccch
Q psy14043         54 DYS----------------------FPPE----------------QCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW   95 (205)
Q Consensus        54 ~~~----------------------~~~~----------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~~   95 (205)
                      ...                      ....                .....++++++||.+||..||++||++.++++|||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw  313 (355)
T d2b1pa1         234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  313 (355)
T ss_dssp             HCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             ccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence            110                      0000                00113678899999999999999999999999999


Q ss_pred             hhhc
Q psy14043         96 FAEI   99 (205)
Q Consensus        96 ~~~~   99 (205)
                      |...
T Consensus       314 ~~~~  317 (355)
T d2b1pa1         314 INVW  317 (355)
T ss_dssp             TGGG
T ss_pred             cCCC
Confidence            9764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.8e-18  Score=130.67  Aligned_cols=89  Identities=20%  Similarity=0.299  Sum_probs=70.1

Q ss_pred             CCCeEEEEecCCC---------------------------------CCcchhHHHHHHHHHHHHcCCCCCCC-CCHHHHH
Q psy14043          2 NGAVLKLIDLGSS---------------------------------AGPSTDMWSLGVLLYILLSGVSPFLD-ESEEETR   47 (205)
Q Consensus         2 ~~~~~kl~Dfg~~---------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~-~~~~~~~   47 (205)
                      +++.+||+|||++                                 ++.++||||+||++|||++|..||.. .+..+..
T Consensus       165 ~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~  244 (311)
T d1r0pa_         165 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT  244 (311)
T ss_dssp             TTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CH
T ss_pred             CCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHH
Confidence            4678999999988                                 38999999999999999997666654 4555566


Q ss_pred             HHHHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         48 AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        48 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                      ..+..+.....   +..+++++.+||.+||+.+|++||++.+++++
T Consensus       245 ~~i~~g~~~~~---p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         245 VYLLQGRRLLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCC---cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            67766644322   24689999999999999999999999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=2.4e-18  Score=132.49  Aligned_cols=100  Identities=21%  Similarity=0.398  Sum_probs=69.3

Q ss_pred             eEEEEecCCC--------------------------CCcchhHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHh
Q psy14043          5 VLKLIDLGSS--------------------------AGPSTDMWSLGVLLYILLSGVSPFLDESE------EETRAHISV   52 (205)
Q Consensus         5 ~~kl~Dfg~~--------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~~~------~~~~~~i~~   52 (205)
                      .+|++|||.|                          |+.++|+||+||++++|++|+.||.....      .+.+..+..
T Consensus       170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~  249 (362)
T d1q8ya_         170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  249 (362)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence            5899999999                          48899999999999999999999975422      111111110


Q ss_pred             --CC------------------C----CCCC--------------CcCCCCCHHHHHHHHHhcccCcCCCCCcccccccc
Q psy14043         53 --AD------------------Y----SFPP--------------EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVA   94 (205)
Q Consensus        53 --~~------------------~----~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~~   94 (205)
                        +.                  .    ....              ......++++++||.+||..||.+||++.++++||
T Consensus       250 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp  329 (362)
T d1q8ya_         250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP  329 (362)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred             HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence              00                  0    0000              00112467899999999999999999999999999


Q ss_pred             hhhhcccCCC
Q psy14043         95 WFAEIAIPNN  104 (205)
Q Consensus        95 ~~~~~~~~~~  104 (205)
                      ||++......
T Consensus       330 ~f~~~~~~~~  339 (362)
T d1q8ya_         330 WLKDTLGMEE  339 (362)
T ss_dssp             GGTTCTTCTT
T ss_pred             ccCCCCCccc
Confidence            9986654433

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.3e-18  Score=127.66  Aligned_cols=89  Identities=24%  Similarity=0.424  Sum_probs=71.6

Q ss_pred             CCCeEEEEecCCC-------------------------------CCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHH
Q psy14043          2 NGAVLKLIDLGSS-------------------------------AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAH   49 (205)
Q Consensus         2 ~~~~~kl~Dfg~~-------------------------------~~~~~DvwslG~~~~~ll~-g~~pf~~~~~~~~~~~   49 (205)
                      .++.+|++|||++                               ++.++|||||||++|||++ |.+||.+.+..+.+..
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~  259 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK  259 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            3688999999999                               3999999999999999998 7777877666555555


Q ss_pred             HHhCCCCCCCCcCCCCCHHHHHHHHHhcccCcCCCCCcccccc
Q psy14043         50 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ   92 (205)
Q Consensus        50 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~   92 (205)
                      +........  .+..+++++.+||.+||+.+|.+||++.++++
T Consensus       260 ~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         260 MIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            544333222  22468999999999999999999999999886

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=9.2e-18  Score=126.07  Aligned_cols=82  Identities=17%  Similarity=0.208  Sum_probs=57.2

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH---hCCCCCC-CCcCCCCCHHHHHHHHHhcccCcCCCCCccc--
Q psy14043         16 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHIS---VADYSFP-PEQCGHISVPARELIGQLLNTHADKRPTAGQ--   89 (205)
Q Consensus        16 ~~~~DvwslG~~~~~ll~g~~pf~~~~~~~~~~~i~---~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~--   89 (205)
                      +.++||||+||++|||++|+.||.+....+....+.   ......+ +....++++++.+||.+||..+|++||++.+  
T Consensus       191 ~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~  270 (299)
T d1ckia_         191 SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLR  270 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHH
T ss_pred             CChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence            899999999999999999999998765544333221   1111111 1223468999999999999999999999764  


Q ss_pred             -ccccchhh
Q psy14043         90 -LLQVAWFA   97 (205)
Q Consensus        90 -~l~~~~~~   97 (205)
                       ++++++..
T Consensus       271 ~~l~~~~~~  279 (299)
T d1ckia_         271 QLFRNLFHR  279 (299)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence             45666543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.7e-16  Score=119.32  Aligned_cols=92  Identities=14%  Similarity=0.115  Sum_probs=63.4

Q ss_pred             CCCeEEEEecCCCC---------------------------------------CcchhHHHHHHHHHHHHcCCCCCCCC-
Q psy14043          2 NGAVLKLIDLGSSA---------------------------------------GPSTDMWSLGVLLYILLSGVSPFLDE-   41 (205)
Q Consensus         2 ~~~~~kl~Dfg~~~---------------------------------------~~~~DvwslG~~~~~ll~g~~pf~~~-   41 (205)
                      .++.+||+|||++.                                       +.++|||||||++|||++|.+||... 
T Consensus       143 ~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~  222 (303)
T d1vjya_         143 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  222 (303)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCC
T ss_pred             CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccc
Confidence            46899999999882                                       34789999999999999998876321 


Q ss_pred             --------------CHHHHHHHHHhCCCCCCC-CcC--CCCCHHHHHHHHHhcccCcCCCCCccccccc
Q psy14043         42 --------------SEEETRAHISVADYSFPP-EQC--GHISVPARELIGQLLNTHADKRPTAGQLLQV   93 (205)
Q Consensus        42 --------------~~~~~~~~i~~~~~~~~~-~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~~l~~   93 (205)
                                    ........+.......+. ..+  ......+.+|+.+||+.+|.+||++.+++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         223 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             ccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                          223333333332221111 110  1123458899999999999999999998763

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.57  E-value=2.2e-15  Score=116.51  Aligned_cols=92  Identities=15%  Similarity=0.253  Sum_probs=69.7

Q ss_pred             cCCCccccccccccCCCeeeeccccc---ceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDG---LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      ..|...+++++|+|+++++++|+.|+   .+++||++++...... ............+.||++.|++++|+||+++|+|
T Consensus       228 ~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l-~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S  306 (393)
T d1sq9a_         228 INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL-SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS  306 (393)
T ss_dssp             -CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE-CBC--------CCBSBSSCEEEEEECSSSSEEEE
T ss_pred             ccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeee-ccccccccceeeeecccCceeeeccCCCCCeeEE
Confidence            35677899999999999999999886   4899999877532111 0111111233456799999999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      ||.|++|+|||+.+++
T Consensus       307 ~s~D~~v~vWd~~~g~  322 (393)
T d1sq9a_         307 AGWDGKLRFWDVKTKE  322 (393)
T ss_dssp             EETTSEEEEEETTTTE
T ss_pred             ECCCCEEEEEECCCCC
Confidence            9999999999998875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.57  E-value=6.4e-16  Score=115.57  Aligned_cols=89  Identities=18%  Similarity=0.248  Sum_probs=67.5

Q ss_pred             CCeEEEEecCCC------------------------------------CCcchhHHHHHHHHHHHHcCCCCCCCC---CH
Q psy14043          3 GAVLKLIDLGSS------------------------------------AGPSTDMWSLGVLLYILLSGVSPFLDE---SE   43 (205)
Q Consensus         3 ~~~~kl~Dfg~~------------------------------------~~~~~DvwslG~~~~~ll~g~~pf~~~---~~   43 (205)
                      ++.+||+|||+|                                    ++.++||||+||++|||++|+.||.+.   +.
T Consensus       142 ~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~  221 (293)
T d1csna_         142 ANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN  221 (293)
T ss_dssp             TTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH
T ss_pred             CCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH
Confidence            578999999998                                    388999999999999999999999764   33


Q ss_pred             HHHHHHHHhCCCCC-CCCcCCCCCHHHHHHHHHhcccCcCCCCCccccc
Q psy14043         44 EETRAHISVADYSF-PPEQCGHISVPARELIGQLLNTHADKRPTAGQLL   91 (205)
Q Consensus        44 ~~~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l   91 (205)
                      .+....+....... +.....++++++.+++..|+..+|++||+...+.
T Consensus       222 ~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         222 KQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence            33344443322211 2223346899999999999999999999866554

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.52  E-value=1.3e-14  Score=111.23  Aligned_cols=77  Identities=18%  Similarity=0.431  Sum_probs=68.7

Q ss_pred             ccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcE
Q psy14043        105 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI  184 (205)
Q Consensus       105 ~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i  184 (205)
                      .++.|++|+|+++++|+|+.|+.|++|+.+++.            ......++||.+.|.+++|||++++|+||+.|++|
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~------------~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i   75 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------------WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA   75 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------------EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCC------------EEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeE
Confidence            468999999999999999999999999998754            12456789999999999999999999999999999


Q ss_pred             EEEeecCCC
Q psy14043        185 IVWMLYKEK  193 (205)
Q Consensus       185 ~~wd~~~~~  193 (205)
                      +|||+.++.
T Consensus        76 ~vWd~~~~~   84 (371)
T d1k8kc_          76 YVWTLKGRT   84 (371)
T ss_dssp             EEEEEETTE
T ss_pred             EEEeecccc
Confidence            999997654

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=1.5e-14  Score=106.70  Aligned_cols=73  Identities=16%  Similarity=0.277  Sum_probs=67.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.++|+++++++|+.|+.+++||+.++.              ...++.+|.+.|++++|+|++++|+||+.|
T Consensus       245 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~h~~~V~~~~~s~~~~~l~s~s~D  310 (317)
T d1vyhc1         245 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR--------------CMKTLNAHEHFVTSLDFHKTAPYVVTGSVD  310 (317)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC--------------CCEEEECCSSCEEEEEECSSSSCEEEEETT
T ss_pred             CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence            355678889999999999999999999999998876              567889999999999999999999999999


Q ss_pred             CcEEEEe
Q psy14043        182 GLIIVWM  188 (205)
Q Consensus       182 ~~i~~wd  188 (205)
                      |+|+|||
T Consensus       311 g~i~iWd  317 (317)
T d1vyhc1         311 QTVKVWE  317 (317)
T ss_dssp             SEEEEEC
T ss_pred             CeEEEeC
Confidence            9999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.49  E-value=2.1e-14  Score=107.40  Aligned_cols=72  Identities=13%  Similarity=0.179  Sum_probs=66.4

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+..+.|+++++++++|+.|+.+++||+.++.              ...++.+|.+.|++++|+|++++|+|||.||
T Consensus       269 ~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~--------------~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg  334 (340)
T d1tbga_         269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD--------------RAGVLAGHDNRVSCLGVTDDGMAVATGSWDS  334 (340)
T ss_dssp             CCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred             ccCceEEEEECCCCCEEEEEECCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEeCCCCEEEEEccCC
Confidence            34457889999999999999999999999998876              6678899999999999999999999999999


Q ss_pred             cEEEEe
Q psy14043        183 LIIVWM  188 (205)
Q Consensus       183 ~i~~wd  188 (205)
                      +|+|||
T Consensus       335 ~v~iWd  340 (340)
T d1tbga_         335 FLKIWN  340 (340)
T ss_dssp             CEEEEC
T ss_pred             EEEEeC
Confidence            999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.1e-13  Score=104.52  Aligned_cols=81  Identities=14%  Similarity=0.172  Sum_probs=67.7

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .|...+.+++|+|+++++++|+ |+.|++||+.+......         .......+|.+.|.+++|+|++++|++|+.|
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~---------~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~d  118 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP---------VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA  118 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSC---------SEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccce---------eEEeeecCCCCcEEEEEEcCCCCEEEEeecc
Confidence            5677899999999999999997 89999999987642210         1223456899999999999999999999999


Q ss_pred             CcEEEEeecCC
Q psy14043        182 GLIIVWMLYKE  192 (205)
Q Consensus       182 ~~i~~wd~~~~  192 (205)
                      ++|++||+...
T Consensus       119 g~i~iwd~~~~  129 (337)
T d1gxra_         119 STLSIWDLAAP  129 (337)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccccccccccc
Confidence            99999998654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.42  E-value=2.4e-13  Score=101.55  Aligned_cols=82  Identities=11%  Similarity=0.139  Sum_probs=74.6

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ....|...+.+++|+|+++++++|+.||.|++||+.++.              ...++.+|...|.+++|+|++.++++|
T Consensus        50 tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~--------------~~~~~~~~~~~v~~v~~~~~~~~l~~~  115 (340)
T d1tbga_          50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN--------------KVHAIPLRSSWVMTCAYAPSGNYVACG  115 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTE--------------EEEEEECSCSCEEEEEECTTSSEEEEE
T ss_pred             EECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccce--------------eEEEEecccccEEeeEeeccceeeeee
Confidence            345788999999999999999999999999999998876              567888999999999999999999999


Q ss_pred             cCCCcEEEEeecCCCC
Q psy14043        179 DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~  194 (205)
                      +.|+++++|+......
T Consensus       116 ~~d~~i~~~~~~~~~~  131 (340)
T d1tbga_         116 GLDNICSIYNLKTREG  131 (340)
T ss_dssp             ETTCCEEEEESSSSCS
T ss_pred             cccceeeccccccccc
Confidence            9999999999876543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=1.9e-13  Score=101.58  Aligned_cols=85  Identities=12%  Similarity=0.047  Sum_probs=70.4

Q ss_pred             cccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC-CCEEEe
Q psy14043         99 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLTS  177 (205)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~-~~~las  177 (205)
                      +...|...+++++|+|+++++++|+.|++|++||+++.....           ......+|.+.|.+++|+|+ +.+|+|
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~-----------~~~~~~~h~~~V~~v~f~~~~~~~l~s   74 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-----------DLLQSLRYKHPLLCCNFIDNTDLQIYV   74 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE-----------EEEEEEECSSCEEEEEEEESSSEEEEE
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcce-----------EEEEecCCCCCEEEEEEeCCCCCEEEE
Confidence            445777889999999999999999999999999998764211           22334579999999999986 568999


Q ss_pred             ecCCCcEEEEeecCCCC
Q psy14043        178 SDETGLIIVWMLYKEKN  194 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~~  194 (205)
                      |+.|++|++||...+..
T Consensus        75 g~~d~~v~~w~~~~~~~   91 (342)
T d1yfqa_          75 GTVQGEILKVDLIGSPS   91 (342)
T ss_dssp             EETTSCEEEECSSSSSS
T ss_pred             cccccceeeeecccccc
Confidence            99999999999977654

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=1.3e-13  Score=105.41  Aligned_cols=75  Identities=20%  Similarity=0.253  Sum_probs=67.3

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEE------cCCCCEE
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW------NEQYEKL  175 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~------s~~~~~l  175 (205)
                      .+...+.+++|+|+++++++|+.|+.|++||+.++.              ...++.+|.+.|.++++      +|++++|
T Consensus       306 ~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~--------------~~~~l~~H~~~V~~~~~~~~~~~spd~~~l  371 (388)
T d1erja_         306 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--------------PLLMLQGHRNSVISVAVANGSSLGPEYNVF  371 (388)
T ss_dssp             CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSCTTCTTCEEE
T ss_pred             cccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--------------EEEEEeCCCCCEEEEEEecCcccCCCCCEE
Confidence            345568889999999999999999999999999887              66789999999999975      6789999


Q ss_pred             EeecCCCcEEEEeec
Q psy14043        176 TSSDETGLIIVWMLY  190 (205)
Q Consensus       176 as~~~d~~i~~wd~~  190 (205)
                      +|||.||+|+|||++
T Consensus       372 ~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         372 ATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEETTSEEEEEEEE
T ss_pred             EEEeCCCEEEEEeee
Confidence            999999999999985

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=4.6e-13  Score=102.23  Aligned_cols=91  Identities=16%  Similarity=0.281  Sum_probs=66.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhh----hhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV----AAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~----~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .|...+++++|+|+|+++|+|+ |+.|++|++.++.......    ..............+|...|.+++|||+|++|++
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s  138 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  138 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCccee
Confidence            4778899999999999999996 8999999998765311111    0000000112234578889999999999999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      |+.||+|++||...++
T Consensus       139 ~~~dg~v~i~~~~~~~  154 (388)
T d1erja_         139 GAEDRLIRIWDIENRK  154 (388)
T ss_dssp             EETTSCEEEEETTTTE
T ss_pred             cccccccccccccccc
Confidence            9999999999988764

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=7.3e-13  Score=99.96  Aligned_cols=73  Identities=15%  Similarity=0.152  Sum_probs=64.2

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++++++++.|+.+++|++.++.              .... .+|...|.+++|+|++++|+||+.|
T Consensus       263 ~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~--------------~~~~-~~~~~~v~~~~~s~d~~~l~t~s~D  327 (337)
T d1gxra_         263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA--------------SIFQ-SKESSSVLSCDISVDDKYIVTGSGD  327 (337)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEE-EECSSCEEEEEECTTSCEEEEEETT
T ss_pred             ccccccceEEECCCCCEEEEEeCCCeEEEEECCCCC--------------EEEE-ccCCCCEEEEEEeCCCCEEEEEeCC
Confidence            455678899999999999999999999999998876              2233 4588999999999999999999999


Q ss_pred             CcEEEEee
Q psy14043        182 GLIIVWML  189 (205)
Q Consensus       182 ~~i~~wd~  189 (205)
                      ++|+|||+
T Consensus       328 ~~I~vWdl  335 (337)
T d1gxra_         328 KKATVYEV  335 (337)
T ss_dssp             SCEEEEEE
T ss_pred             CeEEEEEE
Confidence            99999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.36  E-value=8.8e-13  Score=98.81  Aligned_cols=85  Identities=19%  Similarity=0.281  Sum_probs=69.5

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.++.++|+++.+++++.|+.+++|+..+........       .......+|.+.|.+++|+|++++|+||+.|
T Consensus       187 ~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-------~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~D  259 (311)
T d1nr0a1         187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE-------DDSLKNVAHSGSVFGLTWSPDGTKIASASAD  259 (311)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB-------CTTSSSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccCcccccccccccccccccccccccccccccc-------ccccccccccccccccccCCCCCEEEEEeCC
Confidence            456678999999999999999999999999998765211000       0122456899999999999999999999999


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      |+|+|||+.+++
T Consensus       260 g~v~iwd~~t~~  271 (311)
T d1nr0a1         260 KTIKIWNVATLK  271 (311)
T ss_dssp             SEEEEEETTTTE
T ss_pred             CeEEEEECCCCc
Confidence            999999998775

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.1e-12  Score=95.56  Aligned_cols=74  Identities=20%  Similarity=0.351  Sum_probs=63.6

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      +...+.|++  ++++++++|+.|+.|++||+.++.              ..+++.+|++.|.+++|  ++++|+||+.|+
T Consensus        14 ~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~--------------~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~   75 (293)
T d1p22a2          14 TSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLE--------------CKRILTGHTGSVLCLQY--DERVIITGSSDS   75 (293)
T ss_dssp             SCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCC--------------EEEEECCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred             CCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCc--------------EEEEEecCCCCEeeeec--ccceeecccccc
Confidence            444566654  578999999999999999999887              67889999999999987  578999999999


Q ss_pred             cEEEEeecCCCC
Q psy14043        183 LIIVWMLYKEKN  194 (205)
Q Consensus       183 ~i~~wd~~~~~~  194 (205)
                      +|++|++..+..
T Consensus        76 ~i~~~~~~~~~~   87 (293)
T d1p22a2          76 TVRVWDVNTGEM   87 (293)
T ss_dssp             CEEEEESSSCCE
T ss_pred             cccccccccccc
Confidence            999999987653

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.34  E-value=1.3e-12  Score=96.50  Aligned_cols=82  Identities=17%  Similarity=0.322  Sum_probs=70.3

Q ss_pred             CCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCC
Q psy14043        102 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d  181 (205)
                      .+...+.+++|+|+++++++++.|+.+++|++.+....           .....+.+|...|.+++|+|++++|++|+.|
T Consensus       177 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~-----------~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~d  245 (299)
T d1nr0a2         177 VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL-----------AHTNSWTFHTAKVACVSWSPDNVRLATGSLD  245 (299)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE-----------SCCCCCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccc-----------cccccccccccccccccccccccceEEEcCC
Confidence            45567889999999999999999999999999876421           1335678899999999999999999999999


Q ss_pred             CcEEEEeecCCCC
Q psy14043        182 GLIIVWMLYKEKN  194 (205)
Q Consensus       182 ~~i~~wd~~~~~~  194 (205)
                      ++|++||+.++..
T Consensus       246 g~i~iwd~~~~~~  258 (299)
T d1nr0a2         246 NSVIVWNMNKPSD  258 (299)
T ss_dssp             SCEEEEETTCTTS
T ss_pred             CEEEEEECCCCCc
Confidence            9999999987653

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.33  E-value=1.7e-12  Score=95.85  Aligned_cols=81  Identities=11%  Similarity=0.088  Sum_probs=69.0

Q ss_pred             hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceec-ccceeeEEEEEEcCCCCEEE
Q psy14043         98 EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHSGKVRAIIWNEQYEKLT  176 (205)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~gh~~~v~~~~~s~~~~~la  176 (205)
                      ++...|...+.+++|+|+++++++|+.|+.|++||++++.              ..+.+ .+|...|.+++|+|+|++ +
T Consensus         6 ~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~--------------~~~~~~~~h~~~v~~v~~~~~g~~-~   70 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI--------------SNRVFPDVHATMITGIKTTSKGDL-F   70 (299)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEECSSCSCSSCEEEEEECTTSCE-E
T ss_pred             eEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------------EEEEEcCCCCCcEEEEEeecccee-e
Confidence            4556888999999999999999999999999999998876              33455 479999999999999975 5


Q ss_pred             eecCCCcEEEEeecCCC
Q psy14043        177 SSDETGLIIVWMLYKEK  193 (205)
Q Consensus       177 s~~~d~~i~~wd~~~~~  193 (205)
                      +++.|+++++|+.....
T Consensus        71 ~~~~d~~v~~~~~~~~~   87 (299)
T d1nr0a2          71 TVSWDDHLKVVPAGGSG   87 (299)
T ss_dssp             EEETTTEEEEECSSSSS
T ss_pred             cccceeeEEEeccCCcc
Confidence            67789999999986543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=7.1e-13  Score=102.19  Aligned_cols=81  Identities=16%  Similarity=0.225  Sum_probs=64.0

Q ss_pred             CccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCc
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL  183 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~  183 (205)
                      ...+.+++|+|++ .+++|+.|+.|++||+.++...        ..+....++.+|...|.+++|||||++|++|+.|++
T Consensus       184 ~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~--------~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t  254 (393)
T d1sq9a_         184 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPL--------YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS  254 (393)
T ss_dssp             CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE--------EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT
T ss_pred             CCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccc--------cccccccccccccceEEEcccccccceeeeecCCCC
Confidence            3446788999987 8899999999999999876521        112234567899999999999999999999999985


Q ss_pred             ---EEEEeecCCC
Q psy14043        184 ---IIVWMLYKEK  193 (205)
Q Consensus       184 ---i~~wd~~~~~  193 (205)
                         |++||+.++.
T Consensus       255 ~~~i~lwd~~~g~  267 (393)
T d1sq9a_         255 FGCITLYETEFGE  267 (393)
T ss_dssp             EEEEEEEETTTCC
T ss_pred             cceeeecccccce
Confidence               8999998764

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.30  E-value=1.5e-12  Score=97.25  Aligned_cols=76  Identities=26%  Similarity=0.413  Sum_probs=64.2

Q ss_pred             cCCCccc-cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        101 IPNNTKV-NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       101 ~~~~~~~-~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ..|...+ .|+  +++++++++|+.|+.|++||+.++.              ...++.+|.+.|.+++|+|+ .+|+||+
T Consensus         9 ~GH~~~vitc~--~~~~~~l~tgs~Dg~i~vWd~~~~~--------------~~~~l~~H~~~V~~l~~s~~-~~l~s~s   71 (355)
T d1nexb2           9 RGHMTSVITCL--QFEDNYVITGADDKMIRVYDSINKK--------------FLLQLSGHDGGVWALKYAHG-GILVSGS   71 (355)
T ss_dssp             ECCSSSCEEEE--EEETTEEEEEETTTEEEEEETTTTE--------------EEEEEECCSSCEEEEEEETT-TEEEEEE
T ss_pred             CCcCCCcEEEE--EECCCEEEEEeCCCeEEEEECCCCc--------------EEEEEECCCCCEEEEEEcCC-CEEEEEe
Confidence            3455554 554  4568899999999999999998876              66889999999999999986 4899999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|++|++|+.....
T Consensus        72 ~D~~i~iw~~~~~~   85 (355)
T d1nexb2          72 TDRTVRVWDIKKGC   85 (355)
T ss_dssp             TTCCEEEEETTTTE
T ss_pred             cccccccccccccc
Confidence            99999999987764

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.29  E-value=2.1e-12  Score=94.90  Aligned_cols=76  Identities=20%  Similarity=0.404  Sum_probs=63.1

Q ss_pred             ccCCCccccccccccC----------CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEc
Q psy14043        100 AIPNNTKVNCLAWHQN----------QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN  169 (205)
Q Consensus       100 ~~~~~~~~~~~~~~~~----------~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s  169 (205)
                      ...|...+.+++|+|.          +.++++|+.|+.+++|++.+...             ....+.+|...|++++|+
T Consensus       201 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~-------------~~~~~~~h~~~V~~v~~~  267 (287)
T d1pgua2         201 WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-------------IIKALNAHKDGVNNLLWE  267 (287)
T ss_dssp             SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC-------------CEEETTSSTTCEEEEEEE
T ss_pred             ccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe-------------EEEEeCCCCCCeEEEEEC
Confidence            3456667888888764          46899999999999999976431             456778999999999999


Q ss_pred             CCCCEEEeecCCCcEEEEee
Q psy14043        170 EQYEKLTSSDETGLIIVWML  189 (205)
Q Consensus       170 ~~~~~las~~~d~~i~~wd~  189 (205)
                      |++ .|+|+|.|++|++||+
T Consensus       268 ~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         268 TPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             ETT-EEEEEETTSCEEEEEE
T ss_pred             CCC-EEEEEECCCeEEEEEE
Confidence            987 5889999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.28  E-value=6.4e-12  Score=94.01  Aligned_cols=76  Identities=11%  Similarity=0.017  Sum_probs=65.7

Q ss_pred             CccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCc
Q psy14043        104 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL  183 (205)
Q Consensus       104 ~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~  183 (205)
                      ......++++|+++.++.++ ++.+.+|++++..              ....+.+|+..|++++|||+|++||+|+.||+
T Consensus        17 r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~--------------~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~   81 (311)
T d1nr0a1          17 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT--------------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN   81 (311)
T ss_dssp             TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSS--------------CCEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             CCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCc--------------eeEEEcCCCCCEEEEEEeCCCCeEeccccCce
Confidence            33456788999999999884 6678999998776              55678899999999999999999999999999


Q ss_pred             EEEEeecCCCC
Q psy14043        184 IIVWMLYKEKN  194 (205)
Q Consensus       184 i~~wd~~~~~~  194 (205)
                      |++||+.++..
T Consensus        82 i~iwd~~~~~~   92 (311)
T d1nr0a1          82 VRIWDTTQTTH   92 (311)
T ss_dssp             EEEEESSSTTC
T ss_pred             Eeeeeeecccc
Confidence            99999988754

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.26  E-value=6.5e-12  Score=95.95  Aligned_cols=81  Identities=16%  Similarity=0.232  Sum_probs=70.6

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++++.|+.+++|++.+....            ....+.+|...|.+++|+|+++.|++|+.
T Consensus        48 ~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~------------~~~~~~~~~~~v~~i~~~p~~~~l~~~s~  115 (371)
T d1k8kc_          48 KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK------------PTLVILRINRAARCVRWAPNEKKFAVGSG  115 (371)
T ss_dssp             ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE------------EEEECCCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc------------cccccccccccccccccccccccceeecc
Confidence            457788999999999999999999999999999876411            23456789999999999999999999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |++|++|++....
T Consensus       116 d~~i~i~~~~~~~  128 (371)
T d1k8kc_         116 SRVISICYFEQEN  128 (371)
T ss_dssp             TSSEEEEEEETTT
T ss_pred             cCcceeeeeeccc
Confidence            9999999987654

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=6e-12  Score=92.38  Aligned_cols=80  Identities=20%  Similarity=0.337  Sum_probs=73.3

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+++|+|+++++++|+.|+.|++||+.++.              ...++.+|...|.+++|+|++..+++++.
T Consensus        14 ~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~--------------~~~~~~~h~~~V~~~~~~~~~~~~~~~~~   79 (317)
T d1vyhc1          14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------------FERTLKGHTDSVQDISFDHSGKLLASCSA   79 (317)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------------CCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             cCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC--------------EEEEEeCCCCcEEEEeeeccccccccccc
Confidence            4678899999999999999999999999999999876              66788999999999999999999999999


Q ss_pred             CCcEEEEeecCCCC
Q psy14043        181 TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 d~~i~~wd~~~~~~  194 (205)
                      ++++.+|+......
T Consensus        80 ~~~~~~~~~~~~~~   93 (317)
T d1vyhc1          80 DMTIKLWDFQGFEC   93 (317)
T ss_dssp             TSCCCEEETTSSCE
T ss_pred             cccccccccccccc
Confidence            99999999876543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.24  E-value=1.2e-11  Score=90.74  Aligned_cols=80  Identities=15%  Similarity=0.258  Sum_probs=67.1

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC---------
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ---------  171 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~---------  171 (205)
                      .++...+.+++|+|++.++++|+.|+.+++||+.+...             ....+.+|...|.+++|+|+         
T Consensus       159 ~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-------------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~  225 (287)
T d1pgua2         159 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-------------KTSRWAFRTSKINAISWKPAEKGANEEEI  225 (287)
T ss_dssp             SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-------------EECCSCCCSSCEEEEEECCCC------CC
T ss_pred             eccCCceeEEEeccCccccccccccccccceeeccccc-------------ccccccccccccceeeecccccccccccC
Confidence            34556788999999999999999999999999987651             22456789999999999874         


Q ss_pred             -CCEEEeecCCCcEEEEeecCCC
Q psy14043        172 -YEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       172 -~~~las~~~d~~i~~wd~~~~~  193 (205)
                       +.+|+||+.|++|++||+.++.
T Consensus       226 ~~~~l~sgs~D~~i~iw~~~~~~  248 (287)
T d1pgua2         226 EEDLVATGSLDTNIFIYSVKRPM  248 (287)
T ss_dssp             SCCEEEEEETTSCEEEEESSCTT
T ss_pred             CCCeeEeecCCCeEEEEECCCCC
Confidence             4689999999999999987644

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.22  E-value=4.7e-12  Score=95.19  Aligned_cols=78  Identities=14%  Similarity=0.258  Sum_probs=66.1

Q ss_pred             CCCccccccccccC-CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEc---CCCCEEEe
Q psy14043        102 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN---EQYEKLTS  177 (205)
Q Consensus       102 ~~~~~~~~~~~~~~-~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s---~~~~~las  177 (205)
                      .+...+.+++|+|+ +.++++++.|+.+++||+.++.              ...++.+|...+.++.|+   |||++|+|
T Consensus       203 ~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~--------------~~~~l~~~~~~v~~~~~s~~~~dg~~l~s  268 (325)
T d1pgua1         203 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE--------------FLKYIEDDQEPVQGGIFALSWLDSQKFAT  268 (325)
T ss_dssp             CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC--------------EEEECCBTTBCCCSCEEEEEESSSSEEEE
T ss_pred             CCCCccEEeeeccccceeccccccccceeeeeecccc--------------ccccccccccccccceeeeeccCCCEEEE
Confidence            34556888999997 5889999999999999998876              567888888887666665   68999999


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      ++.|++|+|||+.+++
T Consensus       269 ~s~D~~i~iwd~~~~~  284 (325)
T d1pgua1         269 VGADATIRVWDVTTSK  284 (325)
T ss_dssp             EETTSEEEEEETTTTE
T ss_pred             EeCCCeEEEEECCCCC
Confidence            9999999999998765

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.3e-11  Score=91.68  Aligned_cols=76  Identities=25%  Similarity=0.301  Sum_probs=65.0

Q ss_pred             cCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      ..|...+.+ .++++++++++|+.|+.|++||+.++.              ..+++.+|.+.|.+++|+++  +|+||+.
T Consensus        13 ~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~--------------~~~~~~~h~~~V~~v~~~~~--~l~s~s~   75 (342)
T d2ovrb2          13 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK--------------CLRTLVGHTGGVWSSQMRDN--IIISGST   75 (342)
T ss_dssp             ECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC--------------EEEECCCCSSCEEEEEEETT--EEEEEET
T ss_pred             CCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCC--------------EEEEEeCCCCCEEEEEeCCC--cccccee
Confidence            456666643 366789999999999999999999887              66889999999999999975  8999999


Q ss_pred             CCcEEEEeecCCC
Q psy14043        181 TGLIIVWMLYKEK  193 (205)
Q Consensus       181 d~~i~~wd~~~~~  193 (205)
                      |+++++|+.....
T Consensus        76 D~~~~~~~~~~~~   88 (342)
T d2ovrb2          76 DRTLKVWNAETGE   88 (342)
T ss_dssp             TSCEEEEETTTTE
T ss_pred             ccccccccccccc
Confidence            9999999987654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=9.8e-11  Score=86.72  Aligned_cols=66  Identities=21%  Similarity=0.298  Sum_probs=55.7

Q ss_pred             cccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceecee-----cccceeeEEEEEEcCCCCEEEeecCCCc---
Q psy14043        112 WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS-----LQGHSGKVRAIIWNEQYEKLTSSDETGL---  183 (205)
Q Consensus       112 ~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-----~~gh~~~v~~~~~s~~~~~las~~~d~~---  183 (205)
                      +..+++++++|+.||.|++||++++.              ..++     ..+|.+.|++++|+|++..||+|+.||+   
T Consensus       266 ~~~~~~~~~s~s~Dg~i~iwd~~tg~--------------~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~  331 (342)
T d2ovrb2         266 LQFNKNFVITSSDDGTVKLWDLKTGE--------------FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET  331 (342)
T ss_dssp             EEECSSEEEEEETTSEEEEEETTTCC--------------EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC
T ss_pred             cccCCCeeEEEcCCCEEEEEECCCCC--------------EEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCee
Confidence            44556799999999999999999876              2222     2478999999999999999999999997   


Q ss_pred             -EEEEeecC
Q psy14043        184 -IIVWMLYK  191 (205)
Q Consensus       184 -i~~wd~~~  191 (205)
                       |++||+..
T Consensus       332 ~l~~~Df~~  340 (342)
T d2ovrb2         332 KLLVLDFDV  340 (342)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeCCC
Confidence             99999864

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.02  E-value=3.1e-10  Score=85.05  Aligned_cols=79  Identities=15%  Similarity=0.178  Sum_probs=68.0

Q ss_pred             cCCCccccccccccCCCeeeecccc--cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        101 IPNNTKVNCLAWHQNQGWIAVGGDD--GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~lasg~~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ..+...+.+++|+|+++++++++.+  ..+++|+.+++.               ...+.+|...|.+++|||||++|+++
T Consensus        39 ~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~---------------~~~~~~~~~~v~~~~~spdg~~l~~~  103 (360)
T d1k32a3          39 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK---------------AEKFEENLGNVFAMGVDRNGKFAVVA  103 (360)
T ss_dssp             CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC---------------EEECCCCCCSEEEEEECTTSSEEEEE
T ss_pred             ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc---------------EEEeeCCCceEEeeeeccccccccee
Confidence            3567789999999999999887655  379999998775               24677899999999999999999999


Q ss_pred             cCCCcEEEEeecCCCC
Q psy14043        179 DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 ~~d~~i~~wd~~~~~~  194 (205)
                      +.++.+++||+.+++.
T Consensus       104 ~~~~~~~~~~~~~~~~  119 (360)
T d1k32a3         104 NDRFEIMTVDLETGKP  119 (360)
T ss_dssp             ETTSEEEEEETTTCCE
T ss_pred             ccccccccccccccce
Confidence            9999999999987653

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.00  E-value=4e-10  Score=84.35  Aligned_cols=81  Identities=15%  Similarity=0.104  Sum_probs=65.6

Q ss_pred             CCCccccccccccCCCe-eeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCC-CCEEEeec
Q psy14043        102 PNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLTSSD  179 (205)
Q Consensus       102 ~~~~~~~~~~~~~~~~~-lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~-~~~las~~  179 (205)
                      .+...+.++.|++++.. +++++.|+.+++|+..+.....           ....+.+|...|.+++|+|+ +.+|++|+
T Consensus       157 ~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~-----------~~~~~~~~~~~v~~v~~~pd~~~~l~s~~  225 (325)
T d1pgua1         157 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA-----------SDRTHHKQGSFVRDVEFSPDSGEFVITVG  225 (325)
T ss_dssp             SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE-----------EECSSSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred             ecccccccccccccccceEEEeecccccccccccccccce-----------ecccccCCCCccEEeeeccccceeccccc
Confidence            45667888999999865 6788899999999987654111           22345688899999999996 68899999


Q ss_pred             CCCcEEEEeecCCC
Q psy14043        180 ETGLIIVWMLYKEK  193 (205)
Q Consensus       180 ~d~~i~~wd~~~~~  193 (205)
                      .|+.|++||+.+++
T Consensus       226 ~d~~i~iwd~~~~~  239 (325)
T d1pgua1         226 SDRKISCFDGKSGE  239 (325)
T ss_dssp             TTCCEEEEETTTCC
T ss_pred             cccceeeeeecccc
Confidence            99999999998765

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.94  E-value=2.7e-10  Score=88.94  Aligned_cols=105  Identities=8%  Similarity=-0.099  Sum_probs=76.2

Q ss_pred             ccCcCCCCCcccccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc
Q psy14043         78 NTHADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ  157 (205)
Q Consensus        78 ~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (205)
                      ...++.+....+......+..+...  ..+..++|+|||+++++++.|+.+++||+++.....         ........
T Consensus        37 ~~~d~g~v~v~D~~t~~v~~~~~~g--~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~---------~~~i~~~~  105 (432)
T d1qksa2          37 TLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT---------VAEIKIGS  105 (432)
T ss_dssp             EETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE---------EEEEECCS
T ss_pred             EEcCCCEEEEEECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceE---------EEEEecCC
Confidence            3444444444444444444444332  357889999999999999999999999998765211         11223456


Q ss_pred             cceeeEEEEEEcCCCCEE-EeecCCCcEEEEeecCCC
Q psy14043        158 GHSGKVRAIIWNEQYEKL-TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       158 gh~~~v~~~~~s~~~~~l-as~~~d~~i~~wd~~~~~  193 (205)
                      +|.+.+.+.+|||||++| ++++.|++|++||..++.
T Consensus       106 ~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~  142 (432)
T d1qksa2         106 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE  142 (432)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred             CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcccc
Confidence            788899999999999986 788899999999998765

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.93  E-value=1.2e-09  Score=84.77  Aligned_cols=66  Identities=12%  Similarity=0.043  Sum_probs=56.5

Q ss_pred             cCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCCC
Q psy14043        114 QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       114 ~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~~  193 (205)
                      +...++++.+.|+.+++||..++.              ...++.+|. .+.+++|||||++|++++.|++|++||+.+++
T Consensus        30 ~~~~~~V~~~~dg~v~vwD~~t~~--------------~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~   94 (426)
T d1hzua2          30 LPNLFSVTLRDAGQIALVDGDSKK--------------IVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKE   94 (426)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCS--------------EEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred             CCeEEEEEEcCCCEEEEEECCCCc--------------EEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCc
Confidence            334466788899999999999987              667787775 48999999999999999999999999998876


Q ss_pred             C
Q psy14043        194 N  194 (205)
Q Consensus       194 ~  194 (205)
                      .
T Consensus        95 ~   95 (426)
T d1hzua2          95 P   95 (426)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.8e-10  Score=82.38  Aligned_cols=71  Identities=23%  Similarity=0.334  Sum_probs=53.5

Q ss_pred             ccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEe
Q psy14043        111 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWM  188 (205)
Q Consensus       111 ~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd  188 (205)
                      .+.+++.++++|+.|+.+++|++.+......     +.......++.+|.+.|++++|+  +++|+|||.||+|++||
T Consensus       223 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-----~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         223 CIRFDNKRIVSGAYDGKIKVWDLVAALDPRA-----PAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EEECCSSEEEEEETTSCEEEEEHHHHTSTTS-----CTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             eccccceEEEEEcCCCEEEEEECCCCccccc-----cCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            3556778889999999999999865432110     11112456789999999999995  67899999999999998

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=1.4e-09  Score=80.17  Aligned_cols=82  Identities=20%  Similarity=0.160  Sum_probs=59.7

Q ss_pred             cccCCCeeeecccccceEEEEecCCCCcchhhh-hhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeec
Q psy14043        112 WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA-AANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY  190 (205)
Q Consensus       112 ~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~  190 (205)
                      +..++..+++++.|+.+.+|+.+.......... .............+|...|++++|||++++||||+.||+|++||+.
T Consensus       202 ~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~  281 (342)
T d1yfqa_         202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ  281 (342)
T ss_dssp             CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred             ecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECC
Confidence            445678899999999999999876543211110 0001112223456788899999999999999999999999999998


Q ss_pred             CCC
Q psy14043        191 KEK  193 (205)
Q Consensus       191 ~~~  193 (205)
                      +++
T Consensus       282 ~~~  284 (342)
T d1yfqa_         282 TRK  284 (342)
T ss_dssp             TTE
T ss_pred             CCc
Confidence            765

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.85  E-value=1.1e-09  Score=81.93  Aligned_cols=66  Identities=12%  Similarity=0.186  Sum_probs=54.7

Q ss_pred             cccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecC
Q psy14043        112 WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK  191 (205)
Q Consensus       112 ~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~  191 (205)
                      .++...++++++.++.+++||+.+..                  ...|.+.|.+++|||||++|++++.||+|++||+.+
T Consensus       284 ~~~~~~~~~~~~~~~~i~~~d~~~~~------------------~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~  345 (360)
T d1k32a3         284 HGEFAAYYQGAPEKGVLLKYDVKTRK------------------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK  345 (360)
T ss_dssp             CCSHHHHHHCCCCCEEEEEEETTTCC------------------EEEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSC
T ss_pred             cCCCeeEEEecCCCCEEEEEECCCCe------------------EEEecCCcCEEEECCCCCEEEEEECCCeEEEEECCC
Confidence            33444567888889999999988754                  245778899999999999999999999999999988


Q ss_pred             CCCC
Q psy14043        192 EKNP  195 (205)
Q Consensus       192 ~~~~  195 (205)
                      +..+
T Consensus       346 ~~~~  349 (360)
T d1k32a3         346 PEDE  349 (360)
T ss_dssp             TTSC
T ss_pred             CCcc
Confidence            7653

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.84  E-value=1e-09  Score=85.13  Aligned_cols=102  Identities=7%  Similarity=-0.126  Sum_probs=73.5

Q ss_pred             cCCCCCcccccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccce
Q psy14043         81 ADKRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS  160 (205)
Q Consensus        81 p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~  160 (205)
                      .+.+....++.....+..+...  ..+..++|+|||+++++++.|+.+++||+++.....         ........+|.
T Consensus        40 ~dg~v~vwD~~t~~~~~~l~~g--~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~---------~~~i~~~~~~~  108 (426)
T d1hzua2          40 DAGQIALVDGDSKKIVKVIDTG--YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK---------VAEIKIGIEAR  108 (426)
T ss_dssp             TTTEEEEEETTTCSEEEEEECC--SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE---------EEEEECCSEEE
T ss_pred             CCCEEEEEECCCCcEEEEEeCC--CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeE---------EEEEeCCCCCc
Confidence            3444444454444444443332  346789999999999999999999999999876211         11224456899


Q ss_pred             eeEEEEEEcCCCCEE-EeecCCCcEEEEeecCCC
Q psy14043        161 GKVRAIIWNEQYEKL-TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       161 ~~v~~~~~s~~~~~l-as~~~d~~i~~wd~~~~~  193 (205)
                      ..+.+++|||||++| +++..++++++||..++.
T Consensus       109 ~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~  142 (426)
T d1hzua2         109 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE  142 (426)
T ss_dssp             EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred             ceEEeeeecCCCCEEEEeecCCCeEEEEcCCccc
Confidence            999999999999986 555589999999988764

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=3.2e-09  Score=78.71  Aligned_cols=75  Identities=17%  Similarity=0.282  Sum_probs=64.5

Q ss_pred             CCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG  182 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~  182 (205)
                      ......+..+++++..+++++.|+.+++|+..++.              ....+.+|...|.+++|+  +++|++++.||
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~--------------~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg  263 (355)
T d1nexb2         200 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE--------------LMYTLQGHTALVGLLRLS--DKFLVSAAADG  263 (355)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCCCEEEEC--SSEEEEECTTS
T ss_pred             cccccccccccccceeeecccccceEEeeeccccc--------------cccccccccccccccccc--cceeeeeeccc
Confidence            34456677889999999999999999999998876              567888999999999997  46899999999


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      +|++||+.+..
T Consensus       264 ~i~iwd~~~~~  274 (355)
T d1nexb2         264 SIRGWDANDYS  274 (355)
T ss_dssp             EEEEEETTTCC
T ss_pred             ccccccccccc
Confidence            99999987754

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.77  E-value=3.6e-09  Score=78.51  Aligned_cols=70  Identities=13%  Similarity=0.028  Sum_probs=60.0

Q ss_pred             cccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc-cceeeEEEEEEcCCCCEE-EeecCCCcEEEE
Q psy14043        110 LAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYEKL-TSSDETGLIIVW  187 (205)
Q Consensus       110 ~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~s~~~~~l-as~~~d~~i~~w  187 (205)
                      ++++++++++++++.++.|.+||+++.+              +..++. +|.....+++|+|||+++ ++++.++.|.+|
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~--------------~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~   67 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDT--------------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI   67 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTE--------------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCC--------------EEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEE
Confidence            4688999999999999999999999886              556665 456667899999999986 777889999999


Q ss_pred             eecCCC
Q psy14043        188 MLYKEK  193 (205)
Q Consensus       188 d~~~~~  193 (205)
                      |+.+++
T Consensus        68 d~~t~~   73 (346)
T d1jmxb_          68 DLDTCK   73 (346)
T ss_dssp             ETTTTE
T ss_pred             eCccCe
Confidence            998874

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.76  E-value=1.1e-08  Score=79.52  Aligned_cols=68  Identities=13%  Similarity=0.124  Sum_probs=57.6

Q ss_pred             cccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecC
Q psy14043        112 WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYK  191 (205)
Q Consensus       112 ~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~  191 (205)
                      .+.++-++++.+.++.+.+||.++..              +..++..|. .+..++|||||++|++++.|++|++||+.+
T Consensus        28 ~~~~~~~~v~~~d~g~v~v~D~~t~~--------------v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t   92 (432)
T d1qksa2          28 WDLENLFSVTLRDAGQIALIDGSTYE--------------IKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWM   92 (432)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTCC--------------EEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred             CCCCcEEEEEEcCCCEEEEEECCCCc--------------EEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeC
Confidence            34445556888999999999999987              667777664 589999999999999999999999999988


Q ss_pred             CCC
Q psy14043        192 EKN  194 (205)
Q Consensus       192 ~~~  194 (205)
                      ++.
T Consensus        93 ~~~   95 (432)
T d1qksa2          93 KEP   95 (432)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            764

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.45  E-value=1.2e-07  Score=69.68  Aligned_cols=71  Identities=6%  Similarity=-0.083  Sum_probs=56.0

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      ......+++++..+..+  ++.+++||+.+..              ...++ .+...+.+++|||||++|++++.|++|+
T Consensus       242 ~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~--------------~~~~~-~~~~~~~~~~~s~dG~~l~v~~~~~~i~  304 (337)
T d1pbyb_         242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNA--------------SIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLA  304 (337)
T ss_dssp             CEEEEEECTTSSEEEEE--ESEEEEEETTTTE--------------EEEEE-ECSSCCCEEEECTTSCEEEEESBSSEEE
T ss_pred             ceEEEEecccceEEEEc--cccEEEEECCCCc--------------EEEEE-cCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence            34556677888777665  6889999999876              33333 3455688999999999999999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      |||+.+.+
T Consensus       305 v~D~~t~~  312 (337)
T d1pbyb_         305 AYDAETLE  312 (337)
T ss_dssp             EEETTTCC
T ss_pred             EEECCCCc
Confidence            99998865

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.44  E-value=9.2e-08  Score=70.40  Aligned_cols=64  Identities=6%  Similarity=0.036  Sum_probs=52.0

Q ss_pred             CeeeecccccceEEEEecCCCCcchhhhhhcccceeceecc--cceeeEEEEEEcCCCCEE-EeecCCCcEEEEeecCCC
Q psy14043        117 GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ--GHSGKVRAIIWNEQYEKL-TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       117 ~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--gh~~~v~~~~~s~~~~~l-as~~~d~~i~~wd~~~~~  193 (205)
                      .++++++.|+.|++||+.+..              +..++.  .+...+.+++|||||++| ++++.|+.|.+||+.+++
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~--------------~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~   67 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMA--------------VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE   67 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTE--------------EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC
T ss_pred             eEEEEEcCCCEEEEEECCCCe--------------EEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCc
Confidence            578999999999999999876              444443  344557889999999986 677889999999998876


Q ss_pred             C
Q psy14043        194 N  194 (205)
Q Consensus       194 ~  194 (205)
                      .
T Consensus        68 ~   68 (337)
T d1pbyb_          68 T   68 (337)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=98.43  E-value=2.8e-07  Score=66.78  Aligned_cols=73  Identities=10%  Similarity=-0.053  Sum_probs=55.0

Q ss_pred             ccccccccCCCeeeec---ccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-EeecCCC
Q psy14043        107 VNCLAWHQNQGWIAVG---GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDETG  182 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg---~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~~d~  182 (205)
                      .....+++++..+..+   ..++.+++||..+..              ...++..+ ..+.+++|||||++| ++++.|+
T Consensus       202 ~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~--------------~~~~~~~~-~~~~~va~spdg~~l~va~~~~~  266 (301)
T d1l0qa2         202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK--------------ITARIPVG-PDPAGIAVTPDGKKVYVALSFCN  266 (301)
T ss_dssp             EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE--------------EEEEEECC-SSEEEEEECTTSSEEEEEETTTT
T ss_pred             cceeeccccccccccccccceeeeeeeeecCCCe--------------EEEEEcCC-CCEEEEEEeCCCCEEEEEECCCC
Confidence            3456788888876554   345689999998775              33444433 457899999999986 7888999


Q ss_pred             cEEEEeecCCCC
Q psy14043        183 LIIVWMLYKEKN  194 (205)
Q Consensus       183 ~i~~wd~~~~~~  194 (205)
                      +|++||+.+++.
T Consensus       267 ~i~v~D~~t~~~  278 (301)
T d1l0qa2         267 TVSVIDTATNTI  278 (301)
T ss_dssp             EEEEEETTTTEE
T ss_pred             eEEEEECCCCeE
Confidence            999999988753

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.37  E-value=1.7e-07  Score=69.24  Aligned_cols=72  Identities=10%  Similarity=-0.046  Sum_probs=55.1

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .+....+++++..++... ++.+.+||..++.              ....+. +...+.+++|||||++|++++.|+.|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~--------------~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~  316 (346)
T d1jmxb_         253 LYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRK--------------LIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLA  316 (346)
T ss_dssp             CEEEEEECSSCTTEEEEE-ESEEEEEETTTTE--------------EEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEE
T ss_pred             eeEEEEEeCCCCEEEEec-CCeEEEEECCCCc--------------EEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence            445566777777777664 4578999998775              333332 334588999999999999999999999


Q ss_pred             EEeecCCC
Q psy14043        186 VWMLYKEK  193 (205)
Q Consensus       186 ~wd~~~~~  193 (205)
                      |||+.+.+
T Consensus       317 v~D~~t~~  324 (346)
T d1jmxb_         317 VFNPDTLE  324 (346)
T ss_dssp             EEETTTTE
T ss_pred             EEECccCC
Confidence            99998865

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=5.3e-07  Score=66.31  Aligned_cols=65  Identities=9%  Similarity=0.177  Sum_probs=48.9

Q ss_pred             eeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-EeecCCCcEEEEeecCCCC
Q psy14043        118 WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       118 ~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~~d~~i~~wd~~~~~~  194 (205)
                      .+++++.++.|++|++++...           +.+. ...+|.+.+..++|||||++| +++..|++|++|++.....
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~-----------l~~~-~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~   71 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGA-----------LTLT-QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG   71 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSC-----------EEEE-EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred             EEEECCCCCcEEEEEEcCCCC-----------eEEE-EEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCC
Confidence            457778999999999986531           1122 223577889999999999998 5566799999999976543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=1.3e-06  Score=64.04  Aligned_cols=79  Identities=9%  Similarity=0.030  Sum_probs=56.3

Q ss_pred             CCccccccccccCCCee-eecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC-
Q psy14043        103 NNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE-  180 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~l-asg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~-  180 (205)
                      +...+..++|+|||++| +++..|+.+++|+++......          .. .....+...+..++|+|||++|++++. 
T Consensus        35 ~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~----------~~-~~~~~~~~~p~~l~~spDg~~l~v~~~~  103 (333)
T d1ri6a_          35 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL----------TF-AAESALPGSLTHISTDHQGQFVFVGSYN  103 (333)
T ss_dssp             CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----------EE-EEEEECSSCCSEEEECTTSSEEEEEETT
T ss_pred             CCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcE----------EE-eeecccCCCceEEEEcCCCCEEeecccC
Confidence            44567899999999988 455568999999998764211          01 111123344667999999999988875 


Q ss_pred             CCcEEEEeecCC
Q psy14043        181 TGLIIVWMLYKE  192 (205)
Q Consensus       181 d~~i~~wd~~~~  192 (205)
                      +++|.+|+....
T Consensus       104 ~~~v~~~~~~~~  115 (333)
T d1ri6a_         104 AGNVSVTRLEDG  115 (333)
T ss_dssp             TTEEEEEEEETT
T ss_pred             CCceeeeccccc
Confidence            678999987654

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=98.13  E-value=2e-06  Score=62.09  Aligned_cols=59  Identities=5%  Similarity=0.098  Sum_probs=46.6

Q ss_pred             eecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-EeecCCCcEEEEeecCCC
Q psy14043        120 AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDETGLIIVWMLYKEK  193 (205)
Q Consensus       120 asg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~~d~~i~~wd~~~~~  193 (205)
                      ++++.++.|.+||+++++              +.+++... .....++|||||++| ++++.++.|++||+.++.
T Consensus         6 V~~~~~~~v~v~D~~t~~--------------~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~   65 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNK--------------VTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN   65 (301)
T ss_dssp             EEETTTTEEEEEETTTTE--------------EEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred             EEECCCCEEEEEECCCCe--------------EEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence            456788999999999886              44555432 346789999999987 678889999999998765

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.07  E-value=4.4e-06  Score=62.43  Aligned_cols=76  Identities=11%  Similarity=-0.068  Sum_probs=56.4

Q ss_pred             CCccccccccccCCCeeeec-----ccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        103 NNTKVNCLAWHQNQGWIAVG-----GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg-----~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      ...++...+++|+++.++..     +..+.+.+||..+++              ...++.++...  .++|||||++|+.
T Consensus        19 ~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~--------------~~~~~~~~~~~--~~a~SpDG~~l~v   82 (373)
T d2madh_          19 ADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGS--------------ILGHVNGGFLP--NPVAAHSGSEFAL   82 (373)
T ss_pred             CCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCC--------------EEEEEeCCCCc--cEEEcCCCCEEEE
Confidence            34467788899999887653     234568888877776              44556555543  6999999999988


Q ss_pred             ec----------CCCcEEEEeecCCCC
Q psy14043        178 SD----------ETGLIIVWMLYKEKN  194 (205)
Q Consensus       178 ~~----------~d~~i~~wd~~~~~~  194 (205)
                      ++          .++.|.+||+.+++.
T Consensus        83 a~~~~~~~~~~~~~~~v~v~D~~t~~~  109 (373)
T d2madh_          83 ASTSFSRIAKGKRTDYVEVFDPVTFLP  109 (373)
T ss_pred             EeecCCcccccccceEEEEEECCCCcE
Confidence            75          467899999998764

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.06  E-value=6.4e-06  Score=61.53  Aligned_cols=61  Identities=10%  Similarity=0.018  Sum_probs=46.8

Q ss_pred             eeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCE--EEeecCCCcEEEEeecCCCC
Q psy14043        119 IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK--LTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       119 lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~--las~~~d~~i~~wd~~~~~~  194 (205)
                      +.....++.+.+||..++.              ....+ .|...+.+++|||||+.  +++++.|++|+|||+.+++.
T Consensus       291 ~~~~~~~~~v~~~d~~t~~--------------~~~~~-~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~  353 (373)
T d2madh_         291 WKLHAAAKEVTSVTGLVGQ--------------TSSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             EEeecCCCeEEEEECCCCc--------------EEEEe-cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            3445566788899988876              33333 35566889999999984  57899999999999999874

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.04  E-value=6.1e-06  Score=61.09  Aligned_cols=72  Identities=14%  Similarity=0.127  Sum_probs=51.2

Q ss_pred             cccccccCCCeeeeccc----------ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC--EE
Q psy14043        108 NCLAWHQNQGWIAVGGD----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE--KL  175 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~--~l  175 (205)
                      ..+++++++..+...+.          ...+.+||..+..              ...++. +...+.+++|||||+  .+
T Consensus       252 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~--------------~~~~~~-~~~~~~~~a~spDG~~~l~  316 (355)
T d2bbkh_         252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------------RLAKFE-MGHEIDSINVSQDEKPLLY  316 (355)
T ss_dssp             SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEE-EEEEECEEEECCSSSCEEE
T ss_pred             EEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCc--------------EEEEec-CCCCEEEEEEcCCCCeEEE
Confidence            34566677765544332          2468888888775              334443 345678999999997  46


Q ss_pred             EeecCCCcEEEEeecCCCC
Q psy14043        176 TSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       176 as~~~d~~i~~wd~~~~~~  194 (205)
                      ++++.|++|.|||+.+++.
T Consensus       317 v~~~~d~~i~v~D~~tg~~  335 (355)
T d2bbkh_         317 ALSTGDKTLYIHDAESGEE  335 (355)
T ss_dssp             EEETTTTEEEEEETTTCCE
T ss_pred             EEECCCCEEEEEECCCCCE
Confidence            7888999999999999874

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.99  E-value=4.9e-06  Score=64.62  Aligned_cols=76  Identities=11%  Similarity=0.065  Sum_probs=61.4

Q ss_pred             CCccccccccccCCCeeeeccc---------ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCC
Q psy14043        103 NNTKVNCLAWHQNQGWIAVGGD---------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE  173 (205)
Q Consensus       103 ~~~~~~~~~~~~~~~~lasg~~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~  173 (205)
                      +...+....|+||+++++.++.         ++.+.+||+.++.               ...+.+|...+..+.|||||+
T Consensus        60 ~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~---------------~~~l~~~~~~~~~~~~SPDG~  124 (470)
T d2bgra1          60 FGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ---------------LITEERIPNNTQWVTWSPVGH  124 (470)
T ss_dssp             SSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE---------------ECCSSCCCTTEEEEEECSSTT
T ss_pred             ccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc---------------ccccccCCccccccccccCcc
Confidence            3445778899999999988743         5677899998874               356778888999999999999


Q ss_pred             EEEeecCCCcEEEEeecCCCC
Q psy14043        174 KLTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       174 ~las~~~d~~i~~wd~~~~~~  194 (205)
                      .+|.. .++.+.+|+...+..
T Consensus       125 ~ia~~-~~~~l~~~~~~~g~~  144 (470)
T d2bgra1         125 KLAYV-WNNDIYVKIEPNLPS  144 (470)
T ss_dssp             CEEEE-ETTEEEEESSTTSCC
T ss_pred             eeeEe-ecccceEEECCCCce
Confidence            99996 567899999887753

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.88  E-value=7.8e-06  Score=60.49  Aligned_cols=70  Identities=10%  Similarity=-0.011  Sum_probs=51.1

Q ss_pred             ccccccCCCeeeec-----ccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEee-----
Q psy14043        109 CLAWHQNQGWIAVG-----GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS-----  178 (205)
Q Consensus       109 ~~~~~~~~~~lasg-----~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~-----  178 (205)
                      -.+.+|+++.+...     ..+..+.+||..++.              +..++..+..  ..++|||||++|+.+     
T Consensus         6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~--------------~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~   69 (355)
T d2bbkh_           6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR--------------VIGMIDGGFL--PNPVVADDGSFIAHASTVFS   69 (355)
T ss_dssp             CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE--------------EEEEEEECSS--CEEEECTTSSCEEEEEEEEE
T ss_pred             eEeeCCCCCEEEEEecccCCCcCeEEEEECCCCc--------------EEEEEECCCC--CceEEcCCCCEEEEEeCCCc
Confidence            34568999877553     346679999998876              4455554443  369999999988765     


Q ss_pred             -----cCCCcEEEEeecCCCC
Q psy14043        179 -----DETGLIIVWMLYKEKN  194 (205)
Q Consensus       179 -----~~d~~i~~wd~~~~~~  194 (205)
                           +.|+.|++||+.+++.
T Consensus        70 ~~~~g~~d~~v~v~D~~t~~~   90 (355)
T d2bbkh_          70 RIARGERTDYVEVFDPVTLLP   90 (355)
T ss_dssp             ETTEEEEEEEEEEECTTTCCE
T ss_pred             cccccCCCCEEEEEECCCCCE
Confidence                 3478999999988653

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.69  E-value=2e-05  Score=61.04  Aligned_cols=76  Identities=12%  Similarity=0.160  Sum_probs=58.0

Q ss_pred             cccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC-------
Q psy14043        108 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE-------  180 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~-------  180 (205)
                      ..+.|.+++.++...  ++.+.+|+..++...         .+.-..++.+|...|.++.|||||++|+.++.       
T Consensus        20 ~~~~W~~d~~~~~~~--~~~~~~~~~~t~~~~---------~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~   88 (470)
T d2bgra1          20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSS---------VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH   88 (470)
T ss_dssp             CCCEECSSSEEEEES--SSCEEEEETTTCCEE---------EEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred             cCCEeCCCCEEEEEc--CCcEEEEECCCCCEE---------EEEchhhhhhccCccceeEECCCCCEEEEEECCcceeee
Confidence            346788888877654  678999999988621         11123467788889999999999999998853       


Q ss_pred             --CCcEEEEeecCCCC
Q psy14043        181 --TGLIIVWMLYKEKN  194 (205)
Q Consensus       181 --d~~i~~wd~~~~~~  194 (205)
                        ++.+.+||+.+++.
T Consensus        89 s~~~~~~l~d~~~~~~  104 (470)
T d2bgra1          89 SYTASYDIYDLNKRQL  104 (470)
T ss_dssp             CEEEEEEEEETTTTEE
T ss_pred             ccCceEEEEECCCCcc
Confidence              56789999998764

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.67  E-value=1.6e-05  Score=59.64  Aligned_cols=73  Identities=8%  Similarity=-0.138  Sum_probs=51.8

Q ss_pred             cccccccCCCeeeec----------ccccceEEEEecCCCCcchhhhhhcccceeceecccc-------eeeEEEEEEcC
Q psy14043        108 NCLAWHQNQGWIAVG----------GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-------SGKVRAIIWNE  170 (205)
Q Consensus       108 ~~~~~~~~~~~lasg----------~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh-------~~~v~~~~~s~  170 (205)
                      ..++++|+++.++..          +.|+.|++||..+...              ...+..|       ...-..++|||
T Consensus        68 ~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~--------------~~~i~~p~~~~~~~g~~p~~~a~Sp  133 (368)
T d1mdah_          68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--------------IADIELPDAPRFSVGPRVHIIGNCA  133 (368)
T ss_dssp             CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--------------EEEEEETTSCSCCBSCCTTSEEECT
T ss_pred             CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcE--------------eeeecCCccceecccCCccceEECC
Confidence            347799999887764          4578899999988762              1111111       11123589999


Q ss_pred             CCCEEEeec-CCCcEEEEeecCCCC
Q psy14043        171 QYEKLTSSD-ETGLIIVWMLYKEKN  194 (205)
Q Consensus       171 ~~~~las~~-~d~~i~~wd~~~~~~  194 (205)
                      ||++|+.++ .++++.+||+.+++.
T Consensus       134 DGk~l~va~~~~~~v~~~d~~~~~~  158 (368)
T d1mdah_         134 SSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             TSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             CCCEEEEEeCCCCeEEEEECCCCcE
Confidence            999988776 579999999988753

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.50  E-value=0.00013  Score=54.39  Aligned_cols=54  Identities=11%  Similarity=0.144  Sum_probs=40.7

Q ss_pred             cceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCE--EEeecCCCcEEEEeecCCCC
Q psy14043        126 GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK--LTSSDETGLIIVWMLYKEKN  194 (205)
Q Consensus       126 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~--las~~~d~~i~~wd~~~~~~  194 (205)
                      ..+.+||..++.              ...++. +...+.+++|||||+.  +++++.|++|.|||+.+++.
T Consensus       294 ~~v~v~D~~t~~--------------~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~  349 (368)
T d1mdah_         294 ENTSSVTASVGQ--------------TSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             EEEEEEESSSCC--------------EEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred             ceEEEEECCCCc--------------EeEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            347778887775              333443 4467889999999973  57888999999999998764

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=96.58  E-value=0.0034  Score=45.35  Aligned_cols=71  Identities=17%  Similarity=0.127  Sum_probs=54.3

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEE
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII  185 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~  185 (205)
                      .+..+++.++|+.+++...++.|..++.+...                ..+......+.+++|++||+.+++...++.+.
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~----------------~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~   92 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ----------------QIHATVEGKVSGLAFTSNGDLVATGWNADSIP   92 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCE----------------EEEEECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCE----------------EEEEcCCCCcceEEEcCCCCeEEEecCCceEE
Confidence            45678899999999998888877666644322                23344556789999999999999998888888


Q ss_pred             EEeecCC
Q psy14043        186 VWMLYKE  192 (205)
Q Consensus       186 ~wd~~~~  192 (205)
                      +|+....
T Consensus        93 ~~~~~~~   99 (302)
T d2p4oa1          93 VVSLVKS   99 (302)
T ss_dssp             EEEEECT
T ss_pred             EEEeccc
Confidence            8877554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=95.48  E-value=0.011  Score=45.16  Aligned_cols=79  Identities=9%  Similarity=0.092  Sum_probs=52.1

Q ss_pred             cccccccccCCCee-eecccccceEEEEecCCCCcchhhhhhcccceeceecccce---eeEEEEEEcCCCCEEEeecCC
Q psy14043        106 KVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS---GKVRAIIWNEQYEKLTSSDET  181 (205)
Q Consensus       106 ~~~~~~~~~~~~~l-asg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~---~~v~~~~~s~~~~~las~~~d  181 (205)
                      ....+.++|+|+++ +++..++++.+||+++..+-   .+   ..+.....+.++.   -.....+|.++|..++|..-|
T Consensus       259 sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~---~~---~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~d  332 (441)
T d1qnia2         259 NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDL---FE---DKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFID  332 (441)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHH---TT---TSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTT
T ss_pred             CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhH---hh---ccCCcceEEEeecccccCcccceecCCceEEEccccc
Confidence            35678899999975 66889999999998753210   00   0000011111111   112446799999999999999


Q ss_pred             CcEEEEeec
Q psy14043        182 GLIIVWMLY  190 (205)
Q Consensus       182 ~~i~~wd~~  190 (205)
                      .+|..|++.
T Consensus       333 s~v~kw~~~  341 (441)
T d1qnia2         333 SQVCKWNIA  341 (441)
T ss_dssp             TEEEEEEHH
T ss_pred             ceEEEeccc
Confidence            999999974

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=95.47  E-value=0.0059  Score=46.69  Aligned_cols=66  Identities=8%  Similarity=0.009  Sum_probs=44.4

Q ss_pred             cccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEE-EeecCCCcEEEEe
Q psy14043        110 LAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDETGLIIVWM  188 (205)
Q Consensus       110 ~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~l-as~~~d~~i~~wd  188 (205)
                      ..+.++|+++..++ ++.+.+++.....              +.++...... -..+++||||+++ +++..|++|.|||
T Consensus       223 ~~~~~dGk~~~v~~-~~v~vvd~~~~~~--------------v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d  286 (441)
T d1qnia2         223 AAAVKAGNFKTIGD-SKVPVVDGRGESE--------------FTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIA  286 (441)
T ss_dssp             HHHHHTTCCBCCTT-CCCCEEECSSSCS--------------SEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEE
T ss_pred             EEEecCCCEEEeCC-CCcEEEEcccCCc--------------eEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEE
Confidence            34567788776664 5666666554433              2233333333 3569999999985 6788999999999


Q ss_pred             ecC
Q psy14043        189 LYK  191 (205)
Q Consensus       189 ~~~  191 (205)
                      +.+
T Consensus       287 ~~k  289 (441)
T d1qnia2         287 IDK  289 (441)
T ss_dssp             GGG
T ss_pred             eeh
Confidence            876

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.36  E-value=0.016  Score=40.40  Aligned_cols=67  Identities=9%  Similarity=-0.009  Sum_probs=43.6

Q ss_pred             ccccC--CCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC----CC--
Q psy14043        111 AWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE----TG--  182 (205)
Q Consensus       111 ~~~~~--~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~----d~--  182 (205)
                      ..+|+  |+.++-.+ ++-|-+.+++++.               .+.+..+.+.+...+|||||++||-...    +.  
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~---------------~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~   68 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGS---------------TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTA   68 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCC---------------EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCC---------------EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCce
Confidence            35677  88777654 3445555666654               2455666677889999999999986532    22  


Q ss_pred             cEEEEeecCCC
Q psy14043        183 LIIVWMLYKEK  193 (205)
Q Consensus       183 ~i~~wd~~~~~  193 (205)
                      .|.+.++..+.
T Consensus        69 ~i~~~~~~~g~   79 (281)
T d1k32a2          69 DLYFYNGENGE   79 (281)
T ss_dssp             EEEEEETTTTE
T ss_pred             EEEEEEecCCc
Confidence            35566665554

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.026  Score=39.17  Aligned_cols=72  Identities=6%  Similarity=-0.072  Sum_probs=45.6

Q ss_pred             cccccccCCCeeeeccc-ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC---CCc
Q psy14043        108 NCLAWHQNQGWIAVGGD-DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE---TGL  183 (205)
Q Consensus       108 ~~~~~~~~~~~lasg~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~---d~~  183 (205)
                      ....++|+++.++..+. .+...+|..+.....              .....+.......+|||||+.|+-.+.   ...
T Consensus       174 ~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~  239 (269)
T d2hqsa1         174 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG--------------VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSV  239 (269)
T ss_dssp             EEEEECTTSSEEEEEEECSSCEEEEEEETTTCC--------------EEECCCSSSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred             cccccccccceeEEEeecCCceeeeEeeccccc--------------ceEeecCccccceEECCCCCEEEEEEcCCCCcE
Confidence            44568899987776654 345556665544311              122233445567889999999885553   446


Q ss_pred             EEEEeecCCC
Q psy14043        184 IIVWMLYKEK  193 (205)
Q Consensus       184 i~~wd~~~~~  193 (205)
                      +.++|+..+.
T Consensus       240 l~~~~~dg~~  249 (269)
T d2hqsa1         240 LNLVSTDGRF  249 (269)
T ss_dssp             EEEEETTSCC
T ss_pred             EEEEECCCCC
Confidence            8888887654

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=94.69  E-value=0.13  Score=37.71  Aligned_cols=77  Identities=8%  Similarity=0.040  Sum_probs=49.9

Q ss_pred             cccccccccCCCeeeeccc-ccceEEEEecCCCCcchhhhhhcccceecee--cccceeeEEEEEEcCCCCEE-EeecCC
Q psy14043        106 KVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTGKESTGQVAAANVNLAMNQS--LQGHSGKVRAIIWNEQYEKL-TSSDET  181 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~gh~~~v~~~~~s~~~~~l-as~~~d  181 (205)
                      ....+.|+|+++++.+... ...+.+++.+......           ....  .......-..++|+|+++++ ++.-.+
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~-----------~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~  214 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE-----------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG  214 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE-----------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCcee-----------eccceeecCCCCceEEEEECCCCceEEEeccCC
Confidence            4568899999998777643 3456666655332100           0011  11223456889999999986 556678


Q ss_pred             CcEEEEeecCCC
Q psy14043        182 GLIIVWMLYKEK  193 (205)
Q Consensus       182 ~~i~~wd~~~~~  193 (205)
                      ++|.+||...+.
T Consensus       215 ~~V~v~~~~~~~  226 (365)
T d1jofa_         215 NRICEYVIDPAT  226 (365)
T ss_dssp             TEEEEEEECTTT
T ss_pred             CEEEEEEecCCC
Confidence            999999987654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=94.37  E-value=0.085  Score=37.56  Aligned_cols=105  Identities=16%  Similarity=0.077  Sum_probs=66.9

Q ss_pred             cccCcCCCCCcccccccchhh-------hcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhccc
Q psy14043         77 LNTHADKRPTAGQLLQVAWFA-------EIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVN  149 (205)
Q Consensus        77 l~~~p~~R~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~  149 (205)
                      +..+|+.|+-+.+...+...+       ............+++.++++.+++...++.+..++.........        
T Consensus        33 iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~--------  104 (302)
T d2p4oa1          33 LASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE--------  104 (302)
T ss_dssp             EEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE--------
T ss_pred             EEECCCCCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee--------
Confidence            456676665544444332211       11112234567889999999888887788888888765431110        


Q ss_pred             ceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEEEeecCC
Q psy14043        150 LAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKE  192 (205)
Q Consensus       150 ~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~wd~~~~  192 (205)
                        . ..-.......+.+++.++|+.+++-+.++.+..+|...+
T Consensus       105 --~-~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~  144 (302)
T d2p4oa1         105 --T-LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP  144 (302)
T ss_dssp             --E-EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred             --e-ccccCCccccceeEEccCCCEEeeccccccceeeeccCC
Confidence              0 011123345788999999999999998888888887655

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=93.33  E-value=0.18  Score=36.23  Aligned_cols=68  Identities=9%  Similarity=0.189  Sum_probs=45.5

Q ss_pred             cccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCE-EEeecCCCcEEEEe
Q psy14043        110 LAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSDETGLIIVWM  188 (205)
Q Consensus       110 ~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~-las~~~d~~i~~wd  188 (205)
                      +++..+|+...+....+.|.+++.+++.              ....+..+....++++|.||++. .++.+.+++|...+
T Consensus       231 iavD~~GnlyVa~~~~g~I~~~dp~~g~--------------~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~  296 (314)
T d1pjxa_         231 MDFDEDNNLLVANWGSSHIEVFGPDGGQ--------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE  296 (314)
T ss_dssp             EEEBTTCCEEEEEETTTEEEEECTTCBS--------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             eEEecCCcEEEEEcCCCEEEEEeCCCCE--------------EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence            4455666665555556677777766544              22334444566789999999974 57777889898888


Q ss_pred             ecC
Q psy14043        189 LYK  191 (205)
Q Consensus       189 ~~~  191 (205)
                      +..
T Consensus       297 ~~~  299 (314)
T d1pjxa_         297 WQR  299 (314)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            754

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.76  E-value=0.15  Score=34.95  Aligned_cols=62  Identities=11%  Similarity=0.044  Sum_probs=40.4

Q ss_pred             cccccccccCCCeeeeccc-ccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        106 KVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+...+|+|||+.+|-... .+...+|.......             ....+..+.+......|||+|+.++....
T Consensus        40 ~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~spdg~~i~~~~~  102 (269)
T d2hqsa1          40 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-------------AVRQVASFPRHNGAPAFSPDGSKLAFALS  102 (269)
T ss_dssp             CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-------------CEEEEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred             ceeeeEECCCCCEEEEEEeeccCcceeeeecccC-------------ceeEEeeeecccccceecCCCCeeeEeee
Confidence            3456789999999986543 33333444433221             22345567778888999999999887654

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=91.55  E-value=0.68  Score=33.69  Aligned_cols=87  Identities=9%  Similarity=-0.012  Sum_probs=50.5

Q ss_pred             ccccccccccCCCee-eecccccceEEEEecCCCCcchhh-h---hhc-ccceeceecccceeeEEEEEEcCCCCEEEee
Q psy14043        105 TKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQV-A---AAN-VNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS  178 (205)
Q Consensus       105 ~~~~~~~~~~~~~~l-asg~~d~~i~iw~~~~~~~~~~~~-~---~~~-~~~~~~~~~~gh~~~v~~~~~s~~~~~las~  178 (205)
                      ...+.+.|+|+++++ .+...++.|.+|+++......... .   ..+ ...........+......+.++|||++|.++
T Consensus       193 ~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvs  272 (365)
T d1jofa_         193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS  272 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEE
Confidence            345678899999876 555578899999997654211110 0   000 0000111223445566789999999998776


Q ss_pred             cC-C-----CcEEEEeecC
Q psy14043        179 DE-T-----GLIIVWMLYK  191 (205)
Q Consensus       179 ~~-d-----~~i~~wd~~~  191 (205)
                      .+ +     ..|..|++..
T Consensus       273 nr~~~~~~~~~i~~~~~~~  291 (365)
T d1jofa_         273 SRANKFELQGYIAGFKLRD  291 (365)
T ss_dssp             EEESSTTSCCEEEEEEECT
T ss_pred             cccCCCccceEEEEEEecC
Confidence            43 2     2366666543

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.56  E-value=0.27  Score=37.42  Aligned_cols=92  Identities=13%  Similarity=0.153  Sum_probs=56.5

Q ss_pred             CCCCcccccccchhhhcccCCCccccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceee
Q psy14043         83 KRPTAGQLLQVAWFAEIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK  162 (205)
Q Consensus        83 ~R~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~  162 (205)
                      +++++++++...|....        ....|.+++.++.. ..++.+.++++.++....         +.-+.++..  -.
T Consensus         3 ~~~tle~~~~~~~~~~~--------~~~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~---------l~~~~~~~~--~~   62 (465)
T d1xfda1           3 KKVTVEDLFSEDFKIHD--------PEAKWISDTEFIYR-EQKGTVRLWNVETNTSTV---------LIEGKKIES--LR   62 (465)
T ss_dssp             CCCCHHHHTCTTTCCCC--------CCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEE---------EECTTTTTT--TT
T ss_pred             CceeHHHHhCCccccCC--------CCCEEeCCCcEEEE-eCCCcEEEEECCCCCEEE---------EEcCccccc--cc
Confidence            56778888765443221        12457788776544 356788899988775211         001122222  23


Q ss_pred             EEEEEEcCCCCEEEee---------cCCCcEEEEeecCCCC
Q psy14043        163 VRAIIWNEQYEKLTSS---------DETGLIIVWMLYKEKN  194 (205)
Q Consensus       163 v~~~~~s~~~~~las~---------~~d~~i~~wd~~~~~~  194 (205)
                      +....||||+++++-.         +..+.+.++|+.++..
T Consensus        63 ~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~  103 (465)
T d1xfda1          63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP  103 (465)
T ss_dssp             CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred             cceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCce
Confidence            4567899999987654         3457788999988754

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.47  E-value=0.89  Score=31.14  Aligned_cols=72  Identities=8%  Similarity=0.004  Sum_probs=48.3

Q ss_pred             ccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecCCCcEEE
Q psy14043        107 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV  186 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~d~~i~~  186 (205)
                      ...+.+.++++...+....+.+..++.+....              .......-..-..+++.++|..+++....+.|..
T Consensus       142 p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~--------------~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~  207 (260)
T d1rwia_         142 PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ--------------VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK  207 (260)
T ss_dssp             CCEEEECTTCCEEEEEGGGTEEEEECTTTCCE--------------EECCCSSCCSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred             cceeeecCCCCEeeecccccccccccccccee--------------eeeeccccCCCccceeeeeeeeeeeecCCCEEEE
Confidence            34567778887777766677777777665431              1111123334478999999999999888888888


Q ss_pred             EeecCC
Q psy14043        187 WMLYKE  192 (205)
Q Consensus       187 wd~~~~  192 (205)
                      ++....
T Consensus       208 ~~~~~~  213 (260)
T d1rwia_         208 LLAGST  213 (260)
T ss_dssp             ECTTCS
T ss_pred             EeCCCC
Confidence            876544

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.85  E-value=0.24  Score=37.73  Aligned_cols=74  Identities=9%  Similarity=0.033  Sum_probs=45.7

Q ss_pred             ccccccccCCCeeeecc---------cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEe
Q psy14043        107 VNCLAWHQNQGWIAVGG---------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS  177 (205)
Q Consensus       107 ~~~~~~~~~~~~lasg~---------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las  177 (205)
                      .....++||+++++...         ..+.+.++|+.++...            ...........+....|||||+.||-
T Consensus        63 ~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~------------~l~~~~~~~~~l~~~~wSPDG~~iaf  130 (465)
T d1xfda1          63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------------SLDPPEVSNAKLQYAGWGPKGQQLIF  130 (465)
T ss_dssp             CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------------ECCCTTCCSCCCSBCCBCSSTTCEEE
T ss_pred             cceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCcee------------eccCccCCccccceeeeccCCceEEE
Confidence            34456899998876642         3466778888776521            01111222334556889999999987


Q ss_pred             ecCCCcEEEEeecCCC
Q psy14043        178 SDETGLIIVWMLYKEK  193 (205)
Q Consensus       178 ~~~d~~i~~wd~~~~~  193 (205)
                      .. ++.|.+.+...+.
T Consensus       131 v~-~~nl~~~~~~~~~  145 (465)
T d1xfda1         131 IF-ENNIYYCAHVGKQ  145 (465)
T ss_dssp             EE-TTEEEEESSSSSC
T ss_pred             Ee-cceEEEEecCCCc
Confidence            75 4556666665543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.57  E-value=0.86  Score=30.95  Aligned_cols=68  Identities=9%  Similarity=0.041  Sum_probs=36.1

Q ss_pred             cccccccccCCCeeeecc----cccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeec
Q psy14043        106 KVNCLAWHQNQGWIAVGG----DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD  179 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~----~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~  179 (205)
                      ......|+|||+++|-..    .+....+|-++..........      .......+.........|+|||+.|+...
T Consensus        42 ~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt------~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          42 VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRIT------YFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECC------CCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             cccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEee------ecCCCccCccccccccccCCCCCEEEEEE
Confidence            456678999999888543    223334555443221110000      00001112234456788999999988754

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=82.35  E-value=2.7  Score=29.61  Aligned_cols=61  Identities=10%  Similarity=0.115  Sum_probs=40.9

Q ss_pred             cccccccccCCCeeeecccccceEEEEecCCCCcchhhhhhcccceeceecccceeeEEEEEEcCCCCEEEeecC
Q psy14043        106 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE  180 (205)
Q Consensus       106 ~~~~~~~~~~~~~lasg~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~s~~~~~las~~~  180 (205)
                      .+..+.|.++++...+....+.|..++.++..              ....+.........+++++||+.+++...
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~--------------~~~~~~~~~~~p~gla~~~dG~l~va~~~  101 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------------IKRPFVSHKANPAAIKIHKDGRLFVCYLG  101 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------------EEEEEECSSSSEEEEEECTTSCEEEEECT
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCe--------------EEEEEeCCCCCeeEEEECCCCCEEEEecC
Confidence            34577889999877777677777777766543              22222333345678999999998776543