Diaphorina citri psyllid: psy14234

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------78
MSAAETETATDPVVNQNGTGDPDPVKAEQDVKVNNNNTSDSTSSSSPPPSSTEVTPVKKSPAPPSSSSSAPAPSHHNESNSGNSTKAASVEPPPRDEPRLEPVDGIVQPPVVPPKHRPGRNTNQLQYIVKNVMKAVWKHPHAWPFHEPVDAINLNLPDYHKVITQPMDLGTIKKRLENNYYWSGKEAIQDFTTMFTNCYVYNKPGEDVVLMAQNLEQLFLTKITGMPSEEVVLDAPQPRSSKKKPPVSASPSLNPVIKTPVIPLNKLPSATSTPKPRPPNPVLGSTATTTTAPKVNHLNSMNAPDTPDMKKAIKRKADGSIDHTPSSLHPTPVKSAKQLNTRRESGSITKKPQRISEEGGGGSGLGGSKTPLWYKYCSEIIAELFHKKHQNYAWPFYTPVDVEKLGLTDYFDIIKKPMDLGTVRKKMRNRTYKTAKEFADDVRLIFSNCYKYNPPDHNVVTMARQLSAVFEDRFAKMPDESNLASRAAASVSSDDDSEDERQNQLKYLQEQLKSLTDQIRLLVEDSTKPKKKKKKNRDQPKSKMPMGQNSAMMNDHVNKMNKAPAPLNNGQKPKSLNNVRKPQASNPQQAKKPKPNNANTVAAKKQVRTFDSEDEDVAKPMSYDEKRQLSLDINKLPGDKLGKVVHIIQSREPSLREPNPDEIEIDFETLKPSTLRELEQYVSSCLRKRTYKKTPKPKDEKFAEKKHELEKRLQDVTSQIDSTNKKLKKPKPTTSAAGPTGASRLSASSSSSSDSDSSGQSTSSSSSESSDSEGEKGPH
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccEEEEcccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
***************************************************************************************************************************QLQYIVKNVMKAVWKHPHAWPFHEPVDAINLNLPDYHKVITQPMDLGTIKKRLENNYYWSGKEAIQDFTTMFTNCYVYNKPGEDVVLMAQNLEQLFLTKITGMPSEEVV*******************SLNPVIKTPVIPLNKLPS***********P***********************DTPDMKKAIKRK*******************************************************LWYKYCSEIIAELFHKKHQNYAWPFYTPVDVEKLGLTDYFDIIKKPMDLGTVRKKMRNRTYKTAKEFADDVRLIFSNCYKYNPPDHNVVTMARQLSAVFEDRFAK**************************************************************************************APA*********************************************************************KLPGDKLGKVVHII***************EIDFETLKPSTLRELEQYV*************************************************************************************************
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MSAAETETATDPVVNQNGTGDPDPVKAEQDVKVNNNNTSDSTSSSSPPPSSTEVTPVKKSPAPPSSSSSAPAPSHHNESNSGNSTKAASVEPPPRDEPRLEPVDGIVQPPVVPPKHRPGRNTNQLQYIVKNVMKAVWKHPHAWPFHEPVDAINLNLPDYHKVITQPMDLGTIKKRLENNYYWSGKEAIQDFTTMFTNCYVYNKPGEDVVLMAQNLEQLFLTKITGMPSEEVVLDAPQPRSSKKKPPVSASPSLNPVIKTPVIPLNKLPSATSTPKPRPPNPVLGSTATTTTAPKVNHLNSMNAPDTPDMKKAIKRKADGSIDHTPSSLHPTPVKSAKQLNTRRESGSITKKPQRISEEGGGGSGLGGSKTPLWYKYCSEIIAELFHKKHQNYAWPFYTPVDVEKLGLTDYFDIIKKPMDLGTVRKKMRNRTYKTAKEFADDVRLIFSNCYKYNPPDHNVVTMARQLSAVFEDRFAKMPDESNLASRAAASVSSDDDSxxxxxxxxxxxxxxxxxxxxxxxxxxxxSTKPKKKKKKNRDQPKSKMPMGQNSAMMNDHVNKMNKAPAPLNNGQKPKSLNNVRKPQASNPQQAKKPKPNNANTVAAKKQVRTFDSEDEDVAKPMSYDEKRQLSLDINKLPGDKLGKVVHIIQSREPSLREPNPDEIEIDFETLKPSTLRELEQYVSSCLRKRTYKKTPKPKDEKFAEKxxxxxxxxxxxxxxxxxxxxxLKKPKPTTSAAGPTGASRLSASSSSSSDSDSSGQSTSSSSSESSDSEGEKGPH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Bromodomain-containing protein 2 May play a role in spermatogenesis or folliculogenesis.confidentQ6MGA9
Bromodomain-containing protein 3 confidentQ15059

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0065007 [BP]biological regulationprobableGO:0008150
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0042393 [MF]histone bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UV5, chain A
Confidence level:very confident
Coverage over the Query: 122-232,309-313,324-325,352-358,372-478
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Template: 2R10, chain A
Confidence level:very confident
Coverage over the Query: 123-228,241-251,263-264,306-332,372-477
View the alignment between query and template
View the model in PyMOL
Template: 4ALG, chain A
Confidence level:very confident
Coverage over the Query: 118-235
View the alignment between query and template
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Template: 2OUO, chain A
Confidence level:very confident
Coverage over the Query: 369-479
View the alignment between query and template
View the model in PyMOL
Template: 2JNS, chain A
Confidence level:very confident
Coverage over the Query: 608-689
View the alignment between query and template
View the model in PyMOL