Diaphorina citri psyllid: psy14410


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MSIAVTASGMSVPMGQEEEDAAEFDYFPTNSEADAEKVEEFKREAEKVRKLKRLFEGLKVFLNREVPREPLTLALRSFGAQVSWDKTLFVGATFPEDDESITHQIVDRPSIGKQYISRVFDSINAKQLAPVEKYFIGVTLPPHLSSYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHMSSYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLSPFIDTTKTEHYVPPEAEDPENERLRDPKNIQTLCKYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLFPTSLNFPC
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHcccCECccccccccccccccccccEEEEEcccccccccccccccccHHcccccccccccccccccccccEEEcccccccccHHHHcccccccccccccccccccCECccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEcccEEEECccccccccccccccccccccccccccccccc
************************************************RKLKRLFEGLKVFLNREVPREPLTLALRSFGAQVSWDKTLFVGATFPEDDESITHQIVDRPSIGKQYISRVFDSINAKQLAPVEKYFIGVTLPPHLSSYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHMSSYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLSPFIDTTK*********************NIQTLCKYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLFPTSLNFPC
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSIAVTASGMSVPMGQEEEDAAEFDYFPTNSEADAEKVEEFKREAEKVRKLKRLFEGLKVFLNREVPREPLTLALRSFGAQVSWDKTLFVGATFPEDDESITHQIVDRPSIGKQYISRVFDSINAKQLAPVEKYFIGVTLPPHLSSYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHMSSYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLSPFIDTTKTEHYVPPEAEDPENERLRDPKNIQTLCKYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLYYVQPQWVFDSINAKQLAPVEKYFIGVTLPPHLFPTSLNFPC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006364 [BP]rRNA processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0006139, GO:0044260, GO:0042254, GO:0071704, GO:0010467, GO:0071840, GO:0022613, GO:0034470, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0016072, GO:0044237, GO:0043170, GO:0044085, GO:0006396
GO:0000793 [CC]condensed chromosomeprobableGO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0005694, GO:0043226
GO:0030687 [CC]preribosome, large subunit precursorprobableGO:0032991, GO:0044464, GO:0030684, GO:0005623, GO:0030529, GO:0005575, GO:0044424, GO:0005622
GO:0005654 [CC]nucleoplasmprobableGO:0005575, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0042273 [BP]ribosomal large subunit biogenesisprobableGO:0022613, GO:0044085, GO:0008150, GO:0042254, GO:0071840
GO:0051726 [BP]regulation of cell cycleprobableGO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0070545 [CC]PeBoW complexprobableGO:0030686, GO:0031974, GO:0030684, GO:0043229, GO:0043228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005730, GO:0005634, GO:0030529, GO:0044452, GO:0043234, GO:0032991, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2EP8, chain A
Confidence level:very confident
Coverage over the Query: 49-115,144-170
View the alignment between query and template
View the model in PyMOL
Template: 2EP8, chain A
Confidence level:very confident
Coverage over the Query: 239-274
View the alignment between query and template
View the model in PyMOL
Template: 3U3Z, chain A
Confidence level:confident
Coverage over the Query: 57-85,96-127,146-276
View the alignment between query and template
View the model in PyMOL