Psyllid ID: psy14425

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
Protein Sequence
MAGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHELK
Secondary Structure (PSIPRED)
ccccEEEEEEEEccccccHHHHHHHHccccccccEEEEEEcccEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEEccHHHHHHHHHHHcccccccEEEEEEEEccccEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccEEEHccccEEEEEccccccEcEccc
Coil and Loop (DISEMBL)
MAGIVVVLEIMSREASGNLLsahyrldshphinsLHEVLLGDklaylvfppcsgdlhSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCnaqrsvghelk
Flexible Loop (DISEMBL)
MAGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQgivlrdlklrKFVFCnaqrsvghelk
Low Complexity Region (SEG)
MAGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHELK
Disordered region (IsUnstruct)
***IVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA*********
Disordered Region (DISOPRED)
*AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ********
Disordered Region (DISEMBL)
MAGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ********
Disordered Region (DISPRO)
*AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHELK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	114	2.2.26 [Sep-21-2011]
Q8K4K2	354	Tribbles homolog 3 OS=Mus	yes	N/A	0.938	0.302	0.439	2e-19
Q9WTQ6	349	Tribbles homolog 3 OS=Rat	yes	N/A	0.938	0.306	0.429	7e-19
Q8K4K4	372	Tribbles homolog 1 OS=Mus	no	N/A	0.780	0.239	0.516	1e-18
Q8K4K3	343	Tribbles homolog 2 OS=Mus	no	N/A	0.894	0.297	0.457	2e-18
Q96RU8	372	Tribbles homolog 1 OS=Hom	yes	N/A	0.780	0.239	0.505	3e-18
Q92519	343	Tribbles homolog 2 OS=Hom	no	N/A	0.780	0.259	0.483	5e-18
Q5GLH2	343	Tribbles homolog 2 OS=Bos	yes	N/A	0.780	0.259	0.483	5e-18
Q5R669	343	Tribbles homolog 2 OS=Pon	no	N/A	0.780	0.259	0.483	5e-18
Q28283	343	Tribbles homolog 2 OS=Can	no	N/A	0.780	0.259	0.483	5e-18
Q96RU7	358	Tribbles homolog 3 OS=Hom	no	N/A	0.780	0.248	0.471	2e-15

>sp|Q8K4K2|TRIB3_MOUSE Tribbles homolog 3 OS=Mus musculus GN=Trib3 PE=1 SV=2

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 65/107 (60%)

Query: 2   AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR 61
            G     ++     +  +L+ + RL +H H+    EVLLG +L Y+ F    GDLHS VR
Sbjct: 90  TGTEYTCKVYPASEAQAVLAPYARLPTHQHVARPTEVLLGSRLLYIFFTKTHGDLHSLVR 149

Query: 62  QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
            R+ + E+EA  LFRQ+A  V  CH  G+VLRDLKLR+FVF N +R+
Sbjct: 150 SRRGIPESEAAGLFRQMASAVAHCHKHGLVLRDLKLRRFVFSNCERT 196

Disrupts insulin signaling by binding directly to Akt kinases and blocking their activation. May bind directly to and mask the 'Thr-308' phosphorylation site in AKT1. Binds to ATF4 and inhibits its transcriptional activation activity. Interacts with the NF-kappa-B transactivator p65 RELA and inhibits its phosphorylation and thus its transcriptional activation activity. Interacts with MAPK kinases and regulates activation of MAP kinases. May play a role in programmed neuronal cell death but does not appear to affect non-neuronal cells. Does not display kinase activity.
Mus musculus (taxid: 10090)

>sp|Q9WTQ6|TRIB3_RAT Tribbles homolog 3 OS=Rattus norvegicus GN=Trib3 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 63/107 (58%)

Query: 2   AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR 61
            G     ++     +  +L+ + RL +H H+    EVLLG +L Y  F    GDLHS VR
Sbjct: 85  TGTEYTCKVYPASEAQAVLAPYARLPTHQHVARPTEVLLGSQLLYTFFTKTHGDLHSLVR 144

Query: 62  QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
            R+ + E EA  LFRQ+A  V  CH  G++LRDLKLR+FVF N +R+
Sbjct: 145 SRRGIPEPEAAALFRQMASAVAHCHKHGLILRDLKLRRFVFSNCERT 191

Disrupts insulin signaling by binding directly to Akt kinases and blocking their activation. May bind directly to and mask the 'Thr-308' phosphorylation site in AKT1. Binds to ATF4 and inhibits its transcriptional activation activity. Interacts with the NF-kappa-B transactivator p65 RELA and inhibits its phosphorylation and thus its transcriptional activation activity. Interacts with MAPK kinases and regulates activation of MAP kinases. May play a role in programmed neuronal cell death but does not appear to affect non-neuronal cells. Does not display kinase activity.

Rattus norvegicus (taxid: 10116)

>sp|Q8K4K4|TRIB1_MOUSE Tribbles homolog 1 OS=Mus musculus GN=Trib1 PE=2 SV=2

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 59/89 (66%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           +  + +L SH +I  + EVLLG+  AY+ F    GD+HSYVR RKRL+E EA +LF+QI 
Sbjct: 131 IRPYIQLPSHSNITGIVEVLLGESKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQIV 190

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V  CH   IVL DLKLRKFVF   +R+
Sbjct: 191 SAVAHCHQSAIVLGDLKLRKFVFSTEERT 219

Interacts with MAPK kinases and regulates activation of MAP kinases. May not display kinase activity.

Mus musculus (taxid: 10090)

>sp|Q8K4K3|TRIB2_MOUSE Tribbles homolog 2 OS=Mus musculus GN=Trib2 PE=2 SV=2

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 3/105 (2%)

Query: 4   IVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR 63
           +  V EI   + S   L+  + L +H +IN + E+LLG+  AY+ F    GD+HS+VR  
Sbjct: 88  VCKVFEISCYQES---LAPCFCLSAHSNINQITEILLGETKAYVFFERSYGDMHSFVRTC 144

Query: 64  KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
           K+L+E EA +LF QIA  V  CH  G+VLRDLKLRKF+F + +R+
Sbjct: 145 KKLREEEAARLFYQIASAVAHCHDGGLVLRDLKLRKFIFKDEERT 189

Interacts with MAPK kinases and regulates activation of MAP kinases. Does not display kinase activity.

Mus musculus (taxid: 10090)

>sp|Q96RU8|TRIB1_HUMAN Tribbles homolog 1 OS=Homo sapiens GN=TRIB1 PE=1 SV=2

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 59/89 (66%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           +  + +L SH +I  + EV+LG+  AY+ F    GD+HSYVR RKRL+E EA +LF+QI 
Sbjct: 131 IRPYIQLPSHSNITGIVEVILGETKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQIV 190

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V  CH   IVL DLKLRKFVF   +R+
Sbjct: 191 SAVAHCHQSAIVLGDLKLRKFVFSTEERT 219

Interacts with MAPK kinases and regulates activation of MAP kinases. May not display kinase activity.

Homo sapiens (taxid: 9606)

>sp|Q92519|TRIB2_HUMAN Tribbles homolog 2 OS=Homo sapiens GN=TRIB2 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 62/89 (69%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           L+  + L +H +IN + E++LG+  AY+ F    GD+HS+VR  K+L+E EA +LF QIA
Sbjct: 101 LAPCFCLSAHSNINQITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIA 160

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V  CH  G+VLRDLKLRKF+F + +R+
Sbjct: 161 SAVAHCHDGGLVLRDLKLRKFIFKDEERT 189

Interacts with MAPK kinases and regulates activation of MAP kinases. Does not display kinase activity.

Homo sapiens (taxid: 9606)

>sp|Q5GLH2|TRIB2_BOVIN Tribbles homolog 2 OS=Bos taurus GN=TRIB2 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 62/89 (69%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           L+  + L +H +IN + E++LG+  AY+ F    GD+HS+VR  K+L+E EA +LF QIA
Sbjct: 101 LAPCFCLSAHSNINQITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIA 160

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V  CH  G+VLRDLKLRKF+F + +R+
Sbjct: 161 SAVAHCHDGGLVLRDLKLRKFIFKDEERT 189

Interacts with MAPK kinases and regulates activation of MAP kinases. Does not display kinase activity.

Bos taurus (taxid: 9913)

>sp|Q5R669|TRIB2_PONAB Tribbles homolog 2 OS=Pongo abelii GN=TRIB2 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 62/89 (69%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           L+  + L +H +IN + E++LG+  AY+ F    GD+HS+VR  K+L+E EA +LF QIA
Sbjct: 101 LAPCFCLSAHSNINQITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIA 160

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V  CH  G+VLRDLKLRKF+F + +R+
Sbjct: 161 SAVAHCHDGGLVLRDLKLRKFIFKDEERT 189

Interacts with MAPK kinases and regulates activation of MAP kinases. Does not display kinase activity.

Pongo abelii (taxid: 9601)

>sp|Q28283|TRIB2_CANFA Tribbles homolog 2 OS=Canis familiaris GN=TRIB2 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 62/89 (69%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           L+  + L +H +IN + E++LG+  AY+ F    GD+HS+VR  K+L+E EA +LF QIA
Sbjct: 101 LAPCFCLSAHSNINQITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIA 160

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V  CH  G+VLRDLKLRKF+F + +R+
Sbjct: 161 SAVAHCHDGGLVLRDLKLRKFIFKDEERT 189

Interacts with MAPK kinases and regulates activation of MAP kinases. Does not display kinase activity.

Canis familiaris (taxid: 9615)

>sp|Q96RU7|TRIB3_HUMAN Tribbles homolog 3 OS=Homo sapiens GN=TRIB3 PE=1 SV=2

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 54/89 (60%)

Query: 19  LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQI 78
           +L  + RL  H H+    EVL G +L Y  F    GD+HS VR R R+ E EA  LFRQ+
Sbjct: 107 VLEPYARLPPHKHVARPTEVLAGTQLLYAFFTRTHGDMHSLVRSRHRIPEPEAAVLFRQM 166

Query: 79  AETVRACHAQGIVLRDLKLRKFVFCNAQR 107
           A  +  CH  G+VLRDLKL +FVF + +R
Sbjct: 167 ATALAHCHQHGLVLRDLKLCRFVFADRER 195

Disrupts insulin signaling by binding directly to Akt kinases and blocking their activation. May bind directly to and mask the 'Thr-308' phosphorylation site in AKT1. Binds to ATF4 and inhibits its transcriptional activation activity. Interacts with the NF-kappa-B transactivator p65 RELA and inhibits its phosphorylation and thus its transcriptional activation activity. Interacts with MAPK kinases and regulates activation of MAP kinases. May play a role in programmed neuronal cell death but does not appear to affect non-neuronal cells. Does not display kinase activity.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
242019356	108	ser/thr protein kinase-trb3, putative [P	0.850	0.898	0.717	5e-33
357624851	198	putative tribbles-like protein 2 [Danaus	0.877	0.505	0.693	5e-33
91082437	343	PREDICTED: similar to tribbles homolog 2	0.894	0.297	0.631	3e-31
270007157	343	hypothetical protein TcasGA2_TC013693 [T	0.868	0.288	0.65	5e-31
157116640	302	serine/threonine protein kinase, putativ	0.850	0.321	0.608	9e-30
170039881	294	serine/threonine protein kinase [Culex q	0.850	0.329	0.608	2e-29
312371261	1009	hypothetical protein AND_22330 [Anophele	0.798	0.090	0.604	5e-28
318087012	191	putative serine/threonine protein kinase	0.885	0.528	0.524	5e-24
427778579	341	Putative tribbles log 2 [Rhipicephalus p	0.780	0.260	0.584	7e-23
427782983	341	Putative tribbles log 2 [Rhipicephalus p	0.780	0.260	0.584	8e-23

>gi|242019356|ref|XP_002430127.1| ser/thr protein kinase-trb3, putative [Pediculus humanus corporis] gi|212515218|gb|EEB17389.1| ser/thr protein kinase-trb3, putative [Pediculus humanus corporis]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/99 (71%), Positives = 82/99 (82%), Gaps = 2/99 (2%)

Query: 10  IMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE 68
           ++ REA G LLSAHYR+D HPH+NSL EVLLGDKL YLVFPP   GDLHS+VR RKRL+E
Sbjct: 11  VIGREAGG-LLSAHYRMDGHPHVNSLREVLLGDKLLYLVFPPSKGGDLHSHVRLRKRLRE 69

Query: 69  AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR 107
             ARKLFRQ+  TV+ACH +GIVLRDLKLRKFVF + Q+
Sbjct: 70  PVARKLFRQMVNTVKACHDKGIVLRDLKLRKFVFSDTQK 108

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357624851|gb|EHJ75467.1| putative tribbles-like protein 2 [Danaus plexippus]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/101 (69%), Positives = 83/101 (82%), Gaps = 1/101 (0%)

Query: 7   VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRL 66
           V +++SR+ S +LL AHYRLD HPH+N +HEVL+GDK  YL+FP    DLHSYVR RKRL
Sbjct: 99  VCKVVSRDCS-SLLQAHYRLDGHPHVNPIHEVLVGDKRVYLIFPRSHSDLHSYVRARKRL 157

Query: 67  KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR 107
           +E EAR+LFRQ+AETV ACH QGIVLRDLKLRKFVF + QR
Sbjct: 158 REHEARRLFRQMAETVAACHEQGIVLRDLKLRKFVFADPQR 198

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082437|ref|XP_970911.1| PREDICTED: similar to tribbles homolog 2 [Tribolium castaneum]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/103 (63%), Positives = 87/103 (84%), Gaps = 1/103 (0%)

Query: 6   VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR 65
           +V +I+S++   +L+SAHYRLDSHP ++SLHEV++G++  YLV+P   GDLHSYVR RKR
Sbjct: 98  LVCKIVSKDCH-SLVSAHYRLDSHPRVSSLHEVVVGNRYLYLVYPKAHGDLHSYVRSRKR 156

Query: 66  LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
           L+E+EA++LF+QIAETV+ CH  GIVLRDLKLRKFVF + QR+
Sbjct: 157 LRESEAKRLFKQIAETVQVCHRNGIVLRDLKLRKFVFADGQRT 199

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007157|gb|EFA03605.1| hypothetical protein TcasGA2_TC013693 [Tribolium castaneum]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 85/100 (85%), Gaps = 1/100 (1%)

Query: 8   LEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLK 67
           L+I+S++   +L+SAHYRLDSHP ++SLHEV++G++  YLV+P   GDLHSYVR RKRL+
Sbjct: 143 LQIVSKDC-HSLVSAHYRLDSHPRVSSLHEVVVGNRYLYLVYPKAHGDLHSYVRSRKRLR 201

Query: 68  EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR 107
           E+EA++LF+QIAETV+ CH  GIVLRDLKLRKFVF + QR
Sbjct: 202 ESEAKRLFKQIAETVQVCHRNGIVLRDLKLRKFVFADGQR 241

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116640|ref|XP_001658589.1| serine/threonine protein kinase, putative [Aedes aegypti] gi|108876372|gb|EAT40597.1| AAEL007688-PA [Aedes aegypti]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 75/97 (77%)

Query: 11  MSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAE 70
           ++     NLL+AH+RLD HPH+N LH+V+ G+   YL F P  GDLHS+VR RKRL+E E
Sbjct: 206 IANNPCSNLLTAHFRLDGHPHVNCLHKVIPGNNQTYLFFAPSQGDLHSHVRVRKRLREPE 265

Query: 71  ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR 107
           AR+LFRQ+ E V+ CH QGIVLRDLKLRKFVF +++R
Sbjct: 266 ARRLFRQMCEVVKTCHEQGIVLRDLKLRKFVFADSER 302

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170039881|ref|XP_001847748.1| serine/threonine protein kinase [Culex quinquefasciatus] gi|167863469|gb|EDS26852.1| serine/threonine protein kinase [Culex quinquefasciatus]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 75/97 (77%)

Query: 11  MSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAE 70
           ++     NLL+AH+RLD HPH+N LH+V+ G+   YL F P  GDLHS+VR RKRL+E E
Sbjct: 198 IANNPCSNLLTAHFRLDGHPHVNFLHKVIQGNNQTYLFFAPSQGDLHSHVRVRKRLREPE 257

Query: 71  ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR 107
           AR+LFRQ+ E V+ CH QGIVLRDLKLRKFVF +++R
Sbjct: 258 ARRLFRQMCEVVKTCHEQGIVLRDLKLRKFVFADSER 294

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312371261|gb|EFR19494.1| hypothetical protein AND_22330 [Anopheles darlingi]

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/91 (60%), Positives = 72/91 (79%)

Query: 18  NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQ 77
           NLL+AH+RL++HPH+NSL +V+ G    YL + P  GDLHSYVR RKRL+E EAR+L RQ
Sbjct: 826 NLLTAHFRLENHPHVNSLRKVVQGHNQTYLFYSPSKGDLHSYVRTRKRLREPEARRLCRQ 885

Query: 78  IAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
           +   +++CH QGIVLRDLKLRKFVF +++ S
Sbjct: 886 MCAVIKSCHEQGIVLRDLKLRKFVFADSEGS 916

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|318087012|gb|ADV40098.1| putative serine/threonine protein kinase [Latrodectus hesperus]

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 72/101 (71%)

Query: 7   VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRL 66
           V +++  E     L AH+RLDSHP++N++ EVL+G    Y+VF  C GDLHSYVR ++ L
Sbjct: 89  VCKVVPNERYRETLRAHFRLDSHPYVNTVEEVLVGKSCTYVVFHRCYGDLHSYVRTKRNL 148

Query: 67  KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR 107
           +E EA  LF+Q+A  V ACH+ GIVLRDLKLRKF F + ++
Sbjct: 149 REKEALPLFKQVASAVAACHSAGIVLRDLKLRKFAFKDPEK 189

Source: Latrodectus hesperus

Species: Latrodectus hesperus

Genus: Latrodectus

Family: Theridiidae

Order: Araneae

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427778579|gb|JAA54741.1| Putative tribbles log 2 [Rhipicephalus pulchellus]

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 67/89 (75%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           L+AH RLD H H+N + EVLLG+   Y+ F    GDLHSYVR ++RL+E+EA  LFRQ+A
Sbjct: 101 LAAHLRLDGHDHVNQVEEVLLGESKCYVFFKRSYGDLHSYVRSKRRLRESEALSLFRQVA 160

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V+ACH  G+VLRDLKLRKFVF + +R+
Sbjct: 161 SAVQACHNAGVVLRDLKLRKFVFEDPERT 189

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427782983|gb|JAA56943.1| Putative tribbles log 2 [Rhipicephalus pulchellus]

 Score =  110 bits (276), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/89 (58%), Positives = 67/89 (75%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
           L+AH RLD H H+N + EVLLG+   Y+ F    GDLHSYVR ++RL+E+EA  LFRQ+A
Sbjct: 101 LAAHLRLDGHDHVNQVEEVLLGESKCYVFFKRSYGDLHSYVRSKRRLRESEALSLFRQVA 160

Query: 80  ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             V+ACH  G+VLRDLKLRKFVF + +R+
Sbjct: 161 SAVQACHNAGVVLRDLKLRKFVFEDPERT 189

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
ZFIN|ZDB-GENE-091207-3	343	trib2 "tribbles homolog 2 (Dro	0.780	0.259	0.539	1.3e-20
MGI|MGI:1345675	354	Trib3 "tribbles homolog 3 (Dro	0.789	0.254	0.511	1.3e-19
UNIPROTKB|F1NV51	281	TRIB2 "Uncharacterized protein	0.929	0.377	0.452	3.1e-19
UNIPROTKB|Q7ZZY2	343	TRIB2 "Uncharacterized protein	0.938	0.311	0.448	3.1e-19
RGD|708432	349	Trib3 "tribbles homolog 3 (Dro	0.789	0.257	0.5	6e-19
UNIPROTKB|Q9WTQ6	349	Trib3 "Tribbles homolog 3" [Ra	0.789	0.257	0.5	6e-19
MGI|MGI:2443397	372	Trib1 "tribbles homolog 1 (Dro	0.754	0.231	0.534	7.3e-19
UNIPROTKB|Q96RU8	372	TRIB1 "Tribbles homolog 1" [Ho	0.754	0.231	0.523	1.6e-18
UNIPROTKB|I3L6J0	263	TRIB1 "Uncharacterized protein	0.745	0.323	0.529	1.7e-18
UNIPROTKB|I3LNA0	271	TRIB1 "Uncharacterized protein	0.745	0.313	0.529	1.7e-18

ZFIN|ZDB-GENE-091207-3 trib2 "tribbles homolog 2 (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 48/89 (53%), Positives = 63/89 (70%)

Query:    20 LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIA 79
             L+A++ L +H +IN + E+LLGD  AY+ F    GD+HS+VR  K+L+E EA +LF QIA
Sbjct:   101 LAAYFVLGTHENINQIVEILLGDTRAYVFFERSHGDMHSFVRTCKKLREEEAARLFHQIA 160

Query:    80 ETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
               V  CH  G+VLRDLKLRKFVF N  R+
Sbjct:   161 SAVAHCHDNGLVLRDLKLRKFVFKNEDRN 189

GO:0005524 "ATP binding" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

MGI|MGI:1345675 Trib3 "tribbles homolog 3 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 234 (87.4 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 46/90 (51%), Positives = 61/90 (67%)

Query:    19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQI 78
             +L+ + RL +H H+    EVLLG +L Y+ F    GDLHS VR R+ + E+EA  LFRQ+
Sbjct:   107 VLAPYARLPTHQHVARPTEVLLGSRLLYIFFTKTHGDLHSLVRSRRGIPESEAAGLFRQM 166

Query:    79 AETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             A  V  CH  G+VLRDLKLR+FVF N +R+
Sbjct:   167 ASAVAHCHKHGLVLRDLKLRRFVFSNCERT 196

GO:0003714 "transcription corepressor activity" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0010827 "regulation of glucose transport" evidence=IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019899 "enzyme binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=ISO;IPI

GO:0031625 "ubiquitin protein ligase binding" evidence=IDA;IPI

GO:0032092 "positive regulation of protein binding" evidence=IDA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=TAS

GO:0032869 "cellular response to insulin stimulus" evidence=IDA

GO:0034976 "response to endoplasmic reticulum stress" evidence=ISO

GO:0043405 "regulation of MAP kinase activity" evidence=ISO

GO:0045599 "negative regulation of fat cell differentiation" evidence=IMP

GO:0045717 "negative regulation of fatty acid biosynthetic process" evidence=IMP

GO:0045732 "positive regulation of protein catabolic process" evidence=IC

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0051443 "positive regulation of ubiquitin-protein ligase activity" evidence=IDA

GO:0055106 "ubiquitin-protein ligase regulator activity" evidence=IDA

GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISO

UNIPROTKB|F1NV51 TRIB2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:     3 GIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ 62
             G  + L++        LL+  + L +H +IN + E++LG+  AY+ F    GD+HS+VR 
Sbjct:    23 GRSLFLQVFDIGCYQELLAPCFCLPAHKNINQITEIILGETKAYVFFERSYGDMHSFVRT 82

Query:    63 RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
              K+LKE EA KLF QIA  V  CH  G+VLRDLKLRKF+F + +R+
Sbjct:    83 CKKLKEEEAAKLFYQIASAVAHCHDGGLVLRDLKLRKFIFKDEERT 128

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008811 "chloramphenicol O-acetyltransferase activity" evidence=IEA

UNIPROTKB|Q7ZZY2 TRIB2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 48/107 (44%), Positives = 69/107 (64%)

Query:     2 AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR 61
             +G  +V ++        LL+  + L +H +IN + E++LG+  AY+ F    GD+HS+VR
Sbjct:    83 SGEELVCKVFDIGCYQELLAPCFCLPAHKNINQITEIILGETKAYVFFERSYGDMHSFVR 142

Query:    62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
               K+LKE EA KLF QIA  V  CH  G+VLRDLKLRKF+F + +R+
Sbjct:   143 TCKKLKEEEAAKLFYQIASAVAHCHDGGLVLRDLKLRKFIFKDEERT 189

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0045081 "negative regulation of interleukin-10 biosynthetic process" evidence=IEA

GO:0045599 "negative regulation of fat cell differentiation" evidence=IEA

GO:0055106 "ubiquitin-protein ligase regulator activity" evidence=IEA

RGD|708432 Trib3 "tribbles homolog 3 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 228 (85.3 bits), Expect = 6.0e-19, P = 6.0e-19
 Identities = 45/90 (50%), Positives = 59/90 (65%)

Query:    19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQI 78
             +L+ + RL +H H+    EVLLG +L Y  F    GDLHS VR R+ + E EA  LFRQ+
Sbjct:   102 VLAPYARLPTHQHVARPTEVLLGSQLLYTFFTKTHGDLHSLVRSRRGIPEPEAAALFRQM 161

Query:    79 AETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             A  V  CH  G++LRDLKLR+FVF N +R+
Sbjct:   162 ASAVAHCHKHGLILRDLKLRRFVFSNCERT 191

GO:0003714 "transcription corepressor activity" evidence=IEA;ISO;ISS

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO;ISS

GO:0006915 "apoptotic process" evidence=NAS

GO:0010827 "regulation of glucose transport" evidence=IEA;ISO

GO:0012501 "programmed cell death" evidence=NAS

GO:0016301 "kinase activity" evidence=ISO;ISS

GO:0019899 "enzyme binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO

GO:0032092 "positive regulation of protein binding" evidence=IEA;ISO

GO:0032869 "cellular response to insulin stimulus" evidence=IEA;ISO

GO:0034976 "response to endoplasmic reticulum stress" evidence=ISO;ISS

GO:0043405 "regulation of MAP kinase activity" evidence=ISO;ISS

GO:0045599 "negative regulation of fat cell differentiation" evidence=IEA;ISO

GO:0045717 "negative regulation of fatty acid biosynthetic process" evidence=IEA;ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;ISS

GO:0051443 "positive regulation of ubiquitin-protein ligase activity" evidence=IEA;ISO

GO:0055106 "ubiquitin-protein ligase regulator activity" evidence=IEA;ISO

GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISO;ISS

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q9WTQ6 Trib3 "Tribbles homolog 3" [Rattus norvegicus (taxid:10116)]

 Score = 228 (85.3 bits), Expect = 6.0e-19, P = 6.0e-19
 Identities = 45/90 (50%), Positives = 59/90 (65%)

Query:    19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQI 78
             +L+ + RL +H H+    EVLLG +L Y  F    GDLHS VR R+ + E EA  LFRQ+
Sbjct:   102 VLAPYARLPTHQHVARPTEVLLGSQLLYTFFTKTHGDLHSLVRSRRGIPEPEAAALFRQM 161

Query:    79 AETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
             A  V  CH  G++LRDLKLR+FVF N +R+
Sbjct:   162 ASAVAHCHKHGLILRDLKLRRFVFSNCERT 191

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:2443397 Trib1 "tribbles homolog 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 229 (85.7 bits), Expect = 7.3e-19, P = 7.3e-19
 Identities = 46/86 (53%), Positives = 58/86 (67%)

Query:    23 HYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
             + +L SH +I  + EVLLG+  AY+ F    GD+HSYVR RKRL+E EA +LF+QI   V
Sbjct:   134 YIQLPSHSNITGIVEVLLGESKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQIVSAV 193

Query:    83 RACHAQGIVLRDLKLRKFVFCNAQRS 108
               CH   IVL DLKLRKFVF   +R+
Sbjct:   194 AHCHQSAIVLGDLKLRKFVFSTEERT 219

GO:0004672 "protein kinase activity" evidence=TAS

GO:0004860 "protein kinase inhibitor activity" evidence=ISO

GO:0005524 "ATP binding" evidence=TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO

GO:0007254 "JNK cascade" evidence=ISO

GO:0008134 "transcription factor binding" evidence=ISO;IDA;IPI

GO:0008152 "metabolic process" evidence=IEA

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=ISO

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=ISO

GO:0031625 "ubiquitin protein ligase binding" evidence=IDA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IDA

GO:0032496 "response to lipopolysaccharide" evidence=ISO;IMP

GO:0043405 "regulation of MAP kinase activity" evidence=ISO

GO:0043433 "negative regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO;IDA

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=ISO

GO:0051443 "positive regulation of ubiquitin-protein ligase activity" evidence=IC

GO:0055106 "ubiquitin-protein ligase regulator activity" evidence=IDA

UNIPROTKB|Q96RU8 TRIB1 "Tribbles homolog 1" [Homo sapiens (taxid:9606)]

 Score = 226 (84.6 bits), Expect = 1.6e-18, P = 1.6e-18
 Identities = 45/86 (52%), Positives = 58/86 (67%)

Query:    23 HYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
             + +L SH +I  + EV+LG+  AY+ F    GD+HSYVR RKRL+E EA +LF+QI   V
Sbjct:   134 YIQLPSHSNITGIVEVILGETKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQIVSAV 193

Query:    83 RACHAQGIVLRDLKLRKFVFCNAQRS 108
               CH   IVL DLKLRKFVF   +R+
Sbjct:   194 AHCHQSAIVLGDLKLRKFVFSTEERT 219

GO:0043405 "regulation of MAP kinase activity" evidence=IDA

GO:0004860 "protein kinase inhibitor activity" evidence=IMP

GO:0006469 "negative regulation of protein kinase activity" evidence=IMP

GO:0008134 "transcription factor binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IDA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=IMP

GO:0032496 "response to lipopolysaccharide" evidence=ISS;IMP

GO:0043433 "negative regulation of sequence-specific DNA binding transcription factor activity" evidence=ISS;IMP

GO:0007254 "JNK cascade" evidence=IMP

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=IMP

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IMP

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0005524 "ATP binding" evidence=TAS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0031625 "ubiquitin protein ligase binding" evidence=ISS

GO:0055106 "ubiquitin-protein ligase regulator activity" evidence=ISS

UNIPROTKB|I3L6J0 TRIB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 45/85 (52%), Positives = 57/85 (67%)

Query:    23 HYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
             + +L SH +I  + EV+LG+  AY+ F    GD+HSYVR RKRL+E EA +LF+QI   V
Sbjct:    31 YIQLPSHRNITGIVEVILGETKAYVFFERDFGDMHSYVRSRKRLREEEAARLFKQIVSAV 90

Query:    83 RACHAQGIVLRDLKLRKFVFCNAQR 107
               CH   IVL DLKLRKFVF   +R
Sbjct:    91 AHCHQSAIVLGDLKLRKFVFSTEER 115

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|I3LNA0 TRIB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 45/85 (52%), Positives = 57/85 (67%)

Query:    23 HYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
             + +L SH +I  + EV+LG+  AY+ F    GD+HSYVR RKRL+E EA +LF+QI   V
Sbjct:    28 YIQLPSHRNITGIVEVILGETKAYVFFERDFGDMHSYVRSRKRLREEEAARLFKQIVSAV 87

Query:    83 RACHAQGIVLRDLKLRKFVFCNAQR 107
               CH   IVL DLKLRKFVF   +R
Sbjct:    88 AHCHQSAIVLGDLKLRKFVFSTEER 112

GO:0055106 "ubiquitin-protein ligase regulator activity" evidence=IEA

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IEA

GO:0043433 "negative regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0043405 "regulation of MAP kinase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0007254 "JNK cascade" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96RU8	TRIB1_HUMAN	No assigned EC number	0.5056	0.7807	0.2392	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	114
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-15
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-14
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-12
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-09
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-08
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	5e-07
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-06
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-06
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	4e-05
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	6e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	6e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	7e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.001
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.002
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.002
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.002
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.002
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.002
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.002
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.003
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.004
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.004
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  L++V   +   YLV   C  GDL   +++R RL E EAR   RQI   +   H+
Sbjct: 56  HPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHS 115

Query: 88  QGIVLRDLK 96
           +GIV RDLK
Sbjct: 116 KGIVHRDLK 124

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 67.3 bits (165), Expect = 9e-15
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           SHP+I  L +        YLV   C  GDL  Y+ +   L E EA+K+  QI   +   H
Sbjct: 56  SHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLH 115

Query: 87  AQGIVLRDLKL 97
           + GI+ RDLK 
Sbjct: 116 SNGIIHRDLKP 126

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQR-KRLKEAEARKLFRQIAETVRAC 85
           +HP+I  L+ V   +   YLV   C  G L   +++   +L E E  ++  QI E +   
Sbjct: 49  NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYL 108

Query: 86  HAQGIVLRDLKLRKFVFCNAQRSV 109
           H+ GI+ RDLK    +  +    V
Sbjct: 109 HSNGIIHRDLKPENILLDSDNGKV 132

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 60.2 bits (147), Expect = 4e-12
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            HP+I  L +V+  ++  YLVF  C  DL  Y+ +R   L     + +  Q+   +  CH
Sbjct: 56  KHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH 115

Query: 87  AQGIVLRDLK 96
           +  I+ RDLK
Sbjct: 116 SHRILHRDLK 125

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 58.8 bits (143), Expect = 1e-11
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            HP++  L +V        LV      DL   +R  +R L EA+ +   R + + V   H
Sbjct: 57  QHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH 116

Query: 87  AQGIVLRDLK 96
           A GI+ RDLK
Sbjct: 117 ANGIMHRDLK 126

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.2 bits (126), Expect = 2e-09
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 20  LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQR---KRLKEAEARKLF 75
           +     L+  P+I  L++    +   YLV     G  L   +++      L E+EA  + 
Sbjct: 48  IQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFIL 107

Query: 76  RQIAETVRACHAQGIVLRDLK 96
            QI   +   H++GI+ RD+K
Sbjct: 108 AQILSALEYLHSKGIIHRDIK 128

Length = 384

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR--LKEAEARKLFRQIAETV 82
           +L+ HP+I  L EV   +   Y VF    G+L+  ++ RK     E+  R +  QI + +
Sbjct: 53  KLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGL 112

Query: 83  RACHAQGIVLRDLK 96
              H  G   RDLK
Sbjct: 113 AHIHKHGFFHRDLK 126

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 28  SHPHINSLHEV-LLGDKLAYLVFPPCSGDLHSYVRQRKRLK----EAEARKLFRQIAETV 82
           +HP+I S  E  L G+KL  ++     GDL   + +RK+ +    E E  ++F Q+   +
Sbjct: 57  NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGL 116

Query: 83  RACHAQGIVLRDLKLRK-FVFCNAQRSVG 110
           +A H Q I+ RDLK     +  N    +G
Sbjct: 117 QALHEQKILHRDLKSANILLVANDLVKIG 145

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 28  SHPHINSLHEVLLGDKLA--YLVFPPCSGDLHSYVRQRK-RLKEAEARKLFRQIAETVRA 84
            HP+I  L E++        Y+VF     DL   +   + +  E++ +   +Q+ E ++ 
Sbjct: 56  RHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQY 115

Query: 85  CHAQGIVLRDLK 96
            H+ GI+ RD+K
Sbjct: 116 LHSNGILHRDIK 127

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQR--KRLKEAEARKLFRQIAET 81
            LD HP + +L+     +    LV   C G +L   ++++  K L E  AR  F   AE 
Sbjct: 57  TLD-HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVAR--F-YAAEV 112

Query: 82  VRA---CHAQGIVLRDLK 96
           + A    H  GIV RDLK
Sbjct: 113 LLALEYLHLLGIVYRDLK 130

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 25  RLDSHPHINSLHEVLLGDK---LAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAE 80
           RL  HP+I  L EVL   K   LA LVF     +L+  ++ RKR L E   +    Q+ +
Sbjct: 53  RLSPHPNILRLIEVLFDRKTGRLA-LVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLK 111

Query: 81  TVRACHAQGIVLRDLK 96
           ++   H  GI  RD+K
Sbjct: 112 SLDHMHRNGIFHRDIK 127

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 29  HPHINSLHEVLLGDKL--AYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRAC 85
           HP+I  L EV++G  L   +LV   C  DL S +        E++ + L  Q+   ++  
Sbjct: 65  HPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYL 124

Query: 86  HAQGIVLRDLKL 97
           H   I+ RDLK+
Sbjct: 125 HENFIIHRDLKV 136

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 43.3 bits (102), Expect = 4e-06
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARKLFRQIAETVRACH 86
           +HP +  + + L+   +  +V P  S DL++Y+ +R + L   +A  + +QI E +R  H
Sbjct: 115 NHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH 174

Query: 87  AQGIVLRDLKLRKFVFCNAQRSV 109
           AQ I+ RD+K    +F N    V
Sbjct: 175 AQRIIHRDVKTEN-IFINDVDQV 196

Length = 357

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQ-RKRLKEAEARKLFRQIAETVRAC 85
            HP++  L  V   ++  Y+V      GDL SY+R+ R +L  ++      QIA  +   
Sbjct: 59  DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYL 118

Query: 86  HAQGIVLRDLKLR 98
            ++  + RDL  R
Sbjct: 119 ESKNFIHRDLAAR 131

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 42.4 bits (100), Expect = 9e-06
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSY---VRQRKRLKEAEARKLFRQIAETVRAC 85
           HP+I  L +VL+ +   YL+F   S DL  Y   + + + +     +    QI + +  C
Sbjct: 58  HPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC 117

Query: 86  HAQGIVLRDLK 96
           H++ ++ RDLK
Sbjct: 118 HSRRVLHRDLK 128

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 42  DKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
           +KL YLV  + P  G+L S++ +  R  E  AR    +I   +   H+ GI+ RDLK 
Sbjct: 66  EKL-YLVLEYAPG-GELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKP 121

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLFRQIAETVRACHA 87
           H +I  L++VL  DK   LVF  C  DL  Y       +     +    Q+ + +  CH+
Sbjct: 58  HKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS 117

Query: 88  QGIVLRDLK 96
             ++ RDLK
Sbjct: 118 HNVLHRDLK 126

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
           HP+I   +E         +V      GDL   ++++K+      E +    F Q+   ++
Sbjct: 58  HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALK 117

Query: 84  ACHAQGIVLRDLK 96
             H++ I+ RD+K
Sbjct: 118 YLHSRKILHRDIK 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
           +HP+I  L +V       YLVF     DL+  ++ R+R L E+  +    Q+ + +  CH
Sbjct: 56  NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH 115

Query: 87  AQGIVLRDLK 96
           + GI+ RDLK
Sbjct: 116 SHGILHRDLK 125

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR--LKEAEARKLFRQIAETVRA 84
            HP+I  L  V   ++   +V      GDL  Y+R+ +   L  ++      QIA  +  
Sbjct: 59  DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEY 118

Query: 85  CHAQGIVLRDLKLR 98
             ++  + RDL  R
Sbjct: 119 LESKNFIHRDLAAR 132

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYV-RQRKRLKEAEARKLFRQIAETVR 83
           R   H +I +L E        YLVF      L   +      L     R    Q+ + + 
Sbjct: 55  RQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIA 114

Query: 84  ACHAQGIVLRDLK 96
            CH+  I+ RD+K
Sbjct: 115 YCHSHNIIHRDIK 127

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP I  L+      K  Y++   C G +L + +R R    E  AR     +       H
Sbjct: 51  NHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLH 110

Query: 87  AQGIVLRDLK 96
            +GI+ RDLK
Sbjct: 111 NRGIIYRDLK 120

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 40.6 bits (95), Expect = 4e-05
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
           SHP + +L +V +   L  LV P    DL++Y+  R R L  A+   + RQ+   +   H
Sbjct: 218 SHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH 277

Query: 87  AQGIVLRDLK 96
            +GI+ RD+K
Sbjct: 278 GEGIIHRDIK 287

Length = 461

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 40.2 bits (94), Expect = 6e-05
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR---QRKRLKEAEARKLFRQIAETVRAC 85
           H +I  LH+V+  +    LVF     DL  Y+     R  L     +    Q+ + +  C
Sbjct: 57  HENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC 116

Query: 86  HAQGIVLRDLK 96
           H   ++ RDLK
Sbjct: 117 HENRVLHRDLK 127

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGD-LHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP++ +L EV    +  +LVF  C    L+   +  + + E   +K+  Q  + V  CH 
Sbjct: 59  HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHK 118

Query: 88  QGIVLRDLK 96
              + RD+K
Sbjct: 119 HNCIHRDVK 127

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEAEARKLFRQIAETVRACH 86
            HP+I  L +V        LVF     DL   ++ +   L  A+ +         +   H
Sbjct: 60  KHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH 119

Query: 87  AQGIVLRDLK 96
           +  I+ RDLK
Sbjct: 120 SNWILHRDLK 129

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
             P++  L+    G K  YLV      GDL S +     L E  AR    +I   +   H
Sbjct: 51  QSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLH 110

Query: 87  AQGIVLRDLK 96
           + GI+ RDLK
Sbjct: 111 SNGIIHRDLK 120

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR-LKEAEARKLFRQIAETVRAC 85
           SHP+I  L  V    +  Y+V      GDL  ++R+    L   +  ++  QIA+ +   
Sbjct: 59  SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYL 118

Query: 86  HAQGIVLRDLKLR 98
            ++  V RDL  R
Sbjct: 119 ESKNFVHRDLAAR 131

Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 54  GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           G L S +++  +L E   RK  RQI E +   H+ GIV RD+K
Sbjct: 86  GSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIK 128

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  LH     +   + V    +G DL  +++++++L E  AR    +I+  +   H
Sbjct: 54  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 113

Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 114 ERGIIYRDLKL 124

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 54  GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
           GDL   +++  +L EAE +K+ RQ+ E +   H   I+  D+KL
Sbjct: 94  GDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKL 137

Length = 267

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 24  YRLDSHPHINSLHEVL--LGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
             L  HP+I  L  V+    DK  YLVF     DLH+ +R    L++   R +  Q+ + 
Sbjct: 61  QELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIR-ANILEDVHKRYIMYQLLKA 119

Query: 82  VRACHAQGIVLRDLK 96
           ++  H+  ++ RDLK
Sbjct: 120 LKYIHSGNVIHRDLK 134

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL+ HP I  L+     ++  Y V      G+L  Y+R+   L E   R    +I   + 
Sbjct: 57  RLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE 116

Query: 84  ACHAQGIVLRDLK 96
             H++GI+ RDLK
Sbjct: 117 YLHSKGIIHRDLK 129

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR--LKEAEARKLFRQIAETVRACH 86
           HP+I  L +V+  +   YLVF     DL  Y+       L     +    Q+ + +  CH
Sbjct: 57  HPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH 116

Query: 87  AQGIVLRDLK 96
           +  ++ RDLK
Sbjct: 117 SHRVLHRDLK 126

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 28  SHPHINSLHEVLL--GDKLAYLVFPPCSGDL-----HSYVRQRKRLKEAEARKLFRQIAE 80
            H ++ SL EV L   DK  YL+F     DL          +R  +  +  + L  QI  
Sbjct: 60  KHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILN 119

Query: 81  TVRACHAQGIVLRDLK 96
            V   H+  ++ RDLK
Sbjct: 120 GVHYLHSNWVLHRDLK 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYV--RQRKRLKEAEARKLFRQIAETVRACH 86
           HP+I  L +V+  +   YLVF     DL  ++       +     +    Q+ + +  CH
Sbjct: 58  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH 117

Query: 87  AQGIVLRDLK 96
           +  ++ RDLK
Sbjct: 118 SHRVLHRDLK 127

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  LH     +   + V    SG DL  +++++++L E  AR    +I+  +   H
Sbjct: 54  NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLH 113

Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 114 ERGIIYRDLKL 124

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.5 bits (87), Expect = 5e-04
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVR-QRKR-LKEAEARKLFRQIAETVRAC 85
             +I   +E  L      +V      GDLH  ++ QR R L E +  + F QI   +   
Sbjct: 58  SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHL 117

Query: 86  HAQGIVLRDLK 96
           H++ I+ RD+K
Sbjct: 118 HSKKILHRDIK 128

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP + +L+     D   YLV      G+L S++R+  R  E  AR    Q+   +   H
Sbjct: 59  RHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLH 118

Query: 87  AQGIVLRDLK 96
           +  IV RDLK
Sbjct: 119 SLDIVYRDLK 128

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           SHP I  L       +  Y++      G+L SY+R   R   +       +I   +   H
Sbjct: 59  SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLH 118

Query: 87  AQGIVLRDLK 96
           ++ IV RDLK
Sbjct: 119 SKEIVYRDLK 128

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 46  YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           YLV      DL++ V+  ++L +   + L  QI   ++  H+ GI+ RDLK
Sbjct: 96  YLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLK 145

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           S+P +  LH         +LV    +G DL  +++++++L E  AR    +I   +   H
Sbjct: 54  SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLH 113

Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 114 ERGIIYRDLKL 124

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 26  LDSHPH-INSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           L   P  +  LH      D+L +++     GDL  +++Q  + KE  A     +IA  + 
Sbjct: 56  LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF 115

Query: 84  ACHAQGIVLRDLKL 97
             H++GI+ RDLKL
Sbjct: 116 FLHSKGIIYRDLKL 129

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 28  SHPHINSLHEVL-LGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  L+      D+L +++     GDL  ++++ +R  EA AR    +I   +   H
Sbjct: 54  NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLH 113

Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 114 DKGIIYRDLKL 124

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP +  LH         + V    +G DL  ++++  R  E  AR    +I   ++  H 
Sbjct: 55  HPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHE 114

Query: 88  QGIVLRDLKL 97
           +GI+ RDLKL
Sbjct: 115 RGIIYRDLKL 124

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 72  RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
           + + RQI   +   H+ GIV RD+K +  +F     S
Sbjct: 258 QTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGS 294

Length = 566

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 26  LDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRA 84
            D  P +  LH      D+L +++     GDL  +++Q  + KE +A     +I+  +  
Sbjct: 57  QDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFF 116

Query: 85  CHAQGIVLRDLKL 97
            H +GI+ RDLKL
Sbjct: 117 LHRRGIIYRDLKL 129

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 16/50 (32%), Positives = 22/50 (44%)

Query: 52  CSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFV 101
             GD  + +     L E  AR    ++ E V A H  G + RDLK   F+
Sbjct: 84  PGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFL 133

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 10  IMSREASGNLLSAH-YRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKE 68
           I + +  G    AH  R  +HP I  L      +K   L+ P    DL+ Y+  ++ +  
Sbjct: 122 IKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAI 181

Query: 69  AEARKLFRQIAETVRACHAQGIVLRDLK 96
            +   + R +   ++  H   I+ RD+K
Sbjct: 182 CDILAIERSVLRAIQYLHENRIIHRDIK 209

Length = 391

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
            +   P + +LH     D   +L+    +G +L +++ QR+   E+E R    +I   + 
Sbjct: 60  AVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALD 119

Query: 84  ACHAQGIVLRDLKL 97
             H  GI+ RD+KL
Sbjct: 120 HLHQLGIIYRDIKL 133

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 30  PHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
           P + +LH     D   +L+    +G +L +++ QR+R KE E +    +I   +   H  
Sbjct: 65  PFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL 124

Query: 89  GIVLRDLKLRKFVF 102
           GI+ RD+KL   + 
Sbjct: 125 GIIYRDIKLENILL 138

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 30  PHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
           P +  LH      D+L +++     GDL   ++Q  R KE  A     +IA  +   H++
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120

Query: 89  GIVLRDLKL 97
           GI+ RDLKL
Sbjct: 121 GIIYRDLKL 129

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 29  HPHINSLHEVLLG-DKLAYLVFPPCSG-DLHSYVRQRK--RLKEAEARKLFRQIAETVRA 84
           HP+I +  E   G D L Y+V   C G DL+  ++++K   L E +  + F QIA  ++ 
Sbjct: 58  HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQY 117

Query: 85  CHAQGIVLRDLK 96
            H + I+ RDLK
Sbjct: 118 LHEKHILHRDLK 129

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 34.9 bits (81), Expect = 0.004
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)

Query: 25  RLDS--HPHINSLHEVLLGDKLA-----YLVFPPCSGDLHSYVRQ--RKRLKEAEARKLF 75
           +L+S  HP+I  L +V  G +        LVF     DL +Y+ +  +  L     + L 
Sbjct: 54  QLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLM 113

Query: 76  RQIAETVRACHAQGIVLRDLK 96
           RQ+   V   H+  IV RDLK
Sbjct: 114 RQLLRGVDFLHSHRIVHRDLK 134

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLF-RQIAETVRACHA 87
           H +I +LH+++  DK   LVF     DL  Y+     +      K+F  QI   +  CH 
Sbjct: 63  HANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR 122

Query: 88  QGIVLRDLK 96
           + ++ RDLK
Sbjct: 123 RKVLHRDLK 131

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	114
KOG0595|consensus	429		99.97
KOG0615|consensus	475		99.96
KOG0575|consensus	592		99.95
KOG0611|consensus	668		99.94
KOG0592|consensus	604		99.94
KOG0583|consensus	370		99.94
KOG0598|consensus	357		99.93
KOG0581|consensus	364		99.93
KOG0610|consensus	459		99.93
KOG0661|consensus	538		99.93
KOG0600|consensus	560		99.92
KOG0582|consensus	516		99.92
KOG0588|consensus	786		99.91
KOG0599|consensus	411		99.91
KOG0616|consensus	355		99.91
KOG0659|consensus	318		99.91
KOG0192|consensus	362		99.91
KOG0605|consensus	550		99.91
KOG0593|consensus	396		99.9
KOG0198|consensus	313		99.9
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.9
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.9
KOG0594|consensus	323		99.9
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.9
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.9
PHA03212	391	serine/threonine kinase US3; Provisional	99.9
KOG0586|consensus	596		99.89
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.89
KOG0607|consensus	463		99.89
KOG0585|consensus	576		99.89
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.89
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.89
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.89
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.89
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.89
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.89
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.89
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.89
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.89
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.89
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.89
KOG0663|consensus	419		99.88
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.88
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.88
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.88
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.88
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.88
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.88
KOG0032|consensus	382		99.88
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.88
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.88
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.88
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.88
KOG0597|consensus	808		99.88
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.88
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.88
KOG0660|consensus	359		99.88
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.88
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.88
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.88
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.88
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.88
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.88
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.88
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.88
KOG0580|consensus	281		99.88
KOG0658|consensus	364		99.87
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.87
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.87
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.87
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.87
KOG0197|consensus	468		99.87
KOG0578|consensus	550		99.87
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.87
KOG1187|consensus	361		99.87
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.87
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.87
KOG4721|consensus	904		99.87
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.86
KOG0604|consensus	400		99.86
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.86
KOG0591|consensus	375		99.86
KOG4717|consensus	864		99.86
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.86
PHA03207	392	serine/threonine kinase US3; Provisional	99.86
PTZ00267	478	NIMA-related protein kinase; Provisional	99.86
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.86
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.86
KOG0667|consensus	586		99.86
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.86
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.86
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.86
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.86
PHA03209	357	serine/threonine kinase US3; Provisional	99.85
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.85
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.85
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.85
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.85
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.85
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.85
PHA03211	461	serine/threonine kinase US3; Provisional	99.85
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.85
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.85
PHA02988	283	hypothetical protein; Provisional	99.85
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.85
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.85
KOG0694|consensus	694		99.85
KOG0589|consensus	426		99.85
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.85
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.85
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.85
KOG4250|consensus	732		99.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.85
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.85
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.85
KOG0194|consensus	474		99.85
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.85
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.85
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.85
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.85
PTZ00036	440	glycogen synthase kinase; Provisional	99.84
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.84
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.84
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.84
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.84
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.84
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.84
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.84
KOG0033|consensus	355		99.84
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.84
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.84
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.83
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.83
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.83
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.83
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.83
KOG0608|consensus	1034		99.83
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.83
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.83
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.83
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.83
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.83
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.83
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.83
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.83
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.83
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.83
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.83
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.83
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.83
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.83
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.83
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.83
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.83
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.83
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.83
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.83
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.83
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.83
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.82
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.82
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.82
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.82
KOG4236|consensus	888		99.82
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.82
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.82
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.82
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.82
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.82
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.82
PLN00009	294	cyclin-dependent kinase A; Provisional	99.82
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.82
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.82
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.82
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.82
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.82
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.82
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.82
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.82
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.82
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.82
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.82
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.82
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.82
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.82
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.82
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.82
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.82
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.82
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.82
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.82
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.82
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.81
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.81
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.81
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.81
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.81
KOG0662|consensus	292		99.81
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.81
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.81
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.81
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.81
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.81
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.81
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.81
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.81
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.81
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.81
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.81
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.81
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.81
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.81
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.81
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.81
KOG0666|consensus	438		99.81
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.81
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.81
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.81
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.81
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.81
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.81
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.81
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.81
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.81
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.81
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.81
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.81
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.81
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.81
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.81
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.81
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.8
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.8
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.8
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.8
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.8
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.8
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.8
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.8
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.8
KOG0612|consensus	1317		99.8
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.8
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.8
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.8
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.8
KOG1989|consensus	738		99.8
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.8
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.8
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.8
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.8
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.8
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.8
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.8
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.8
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.8
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.8
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.8
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.8
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.8
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.8
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.8
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.8
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.79
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.79
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.79
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.79
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.79
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.79
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.79
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.79
KOG0574|consensus	502		99.79
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.79
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.79
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.79
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.79
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.79
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.79
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.79
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.79
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.79
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.79
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.79
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.79
PTZ00284	467	protein kinase; Provisional	99.79
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.79
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.79
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.79
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.79
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.79
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.79
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.79
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.78
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.78
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.78
KOG1152|consensus	772		99.78
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.78
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.78
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.78
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.78
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.78
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.78
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.78
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.78
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.78
PTZ00283	496	serine/threonine protein kinase; Provisional	99.78
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.78
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.78
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.78
KOG1094|consensus	807		99.78
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.78
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.78
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.77
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.77
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.77
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.77
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.77
KOG1026|consensus	774		99.77
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.77
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.77
KOG0668|consensus	338		99.77
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.77
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.77
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.77
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.77
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.77
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.77
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.77
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.77
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.77
KOG0690|consensus	516		99.76
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.76
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.76
KOG0584|consensus	632		99.76
KOG0193|consensus	678		99.76
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.76
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.76
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.76
KOG0201|consensus	467		99.76
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.76
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.76
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.76
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.75
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.75
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.75
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.75
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.75
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.75
KOG0603|consensus	612		99.75
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.75
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.74
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.74
KOG4645|consensus	1509		99.74
KOG1290|consensus	590		99.74
KOG0579|consensus	1187		99.74
KOG1095|consensus	1025		99.74
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.74
PRK10345	210	hypothetical protein; Provisional	99.73
KOG0577|consensus	948		99.73
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.73
KOG0986|consensus	591		99.73
KOG0587|consensus	953		99.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.73
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.72
PHA03210	501	serine/threonine kinase US3; Provisional	99.72
KOG1027|consensus	903		99.71
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.71
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.71
KOG0696|consensus	683		99.7
KOG2345|consensus	302		99.7
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.7
KOG0614|consensus	732		99.7
KOG0596|consensus	677		99.69
KOG4279|consensus	1226		99.69
KOG0196|consensus	996		99.69
KOG0695|consensus	593		99.68
KOG3653|consensus	534		99.68
KOG0665|consensus	369		99.68
KOG2052|consensus	513		99.67
KOG0984|consensus	282		99.67
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.67
KOG4257|consensus	974		99.66
KOG1167|consensus	418		99.66
KOG0983|consensus	391		99.66
KOG1151|consensus	775		99.65
PRK09188	365	serine/threonine protein kinase; Provisional	99.65
KOG0671|consensus	415		99.64
KOG1345|consensus	378		99.64
KOG4278|consensus	1157		99.64
KOG1163|consensus	341		99.64
KOG0199|consensus	1039		99.62
PRK14879	211	serine/threonine protein kinase; Provisional	99.61
KOG0576|consensus	829		99.61
smart00090	237	RIO RIO-like kinase.	99.61
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.6
KOG1165|consensus	449		99.6
KOG0669|consensus	376		99.6
KOG0200|consensus	609		99.59
PHA02882	294	putative serine/threonine kinase; Provisional	99.56
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.54
KOG0664|consensus	449		99.54
KOG1164|consensus	322		99.53
KOG1006|consensus	361		99.53
PRK12274	218	serine/threonine protein kinase; Provisional	99.5
KOG0670|consensus	752		99.5
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.5
PLN00181	793	protein SPA1-RELATED; Provisional	99.5
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.48
KOG1025|consensus	1177		99.48
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.47
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.46
KOG1035|consensus	1351		99.44
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.42
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.33
KOG1166|consensus	974		99.32
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.31
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.29
KOG4158|consensus	598		99.21
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.16
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.14
KOG0590|consensus	601		99.13
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.11
KOG1240|consensus	1431		99.09
KOG3087|consensus	229		99.05
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.96
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.91
KOG3741|consensus	655		98.9
KOG0603|consensus	612		98.89
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.83
KOG1243|consensus	690		98.82
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.78
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.78
KOG1024|consensus	563		98.74
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.59
KOG1023|consensus	484		98.46
KOG0195|consensus	448		98.31
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.31
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.26
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.24
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.22
KOG0590|consensus	601		98.19
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.18
KOG0601|consensus	524		98.16
PRK09902	216	hypothetical protein; Provisional	98.14
KOG1266|consensus	458		98.12
KOG0601|consensus	524		98.02
KOG1033|consensus	516		97.87
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.71
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.62
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.58
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.24
KOG2270|consensus	520		97.14
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.94
KOG0606|consensus	1205		96.52
KOG1235|consensus	538		96.28
KOG1035|consensus	1351		95.35
KOG0606|consensus	1205		95.18
PRK10593	297	hypothetical protein; Provisional	94.88
PHA03111	444	Ser/Thr kinase; Provisional	94.58
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.2
PLN02876	822	acyl-CoA dehydrogenase	93.51
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	93.27
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	92.84
PF01636	239	APH: Phosphotransferase enzyme family This family	92.24
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	91.62
KOG0576|consensus	829		91.47
COG4248	637	Uncharacterized protein with protein kinase and he	91.45
PRK05231	319	homoserine kinase; Provisional	89.1
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	88.37
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	87.28
PF01636	239	APH: Phosphotransferase enzyme family This family	87.26
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	86.74
KOG2268|consensus	465		86.55
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	86.43
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	86.13
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	85.94
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	85.84
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	85.22
PRK12396	409	5-methylribose kinase; Reviewed	84.86
PRK10271	188	thiK thiamine kinase; Provisional	84.78
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	84.19
KOG2464|consensus	246		83.01
PTZ00384	383	choline kinase; Provisional	83.0
KOG2137|consensus	700		82.45
KOG1236|consensus	565		82.42
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	81.81
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	81.32
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	80.79

>KOG0595|consensus

Probab=99.97  E-value=2.6e-29  Score=163.48  Aligned_cols=103  Identities=31%  Similarity=0.557  Sum_probs=95.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ++..||||.+.+..        ...|+.++..+ +|||||.+++++++++++|+||||| +|+|.+++...+.+++.+++
T Consensus        34 ~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r  112 (429)
T KOG0595|consen   34 SGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATAR  112 (429)
T ss_pred             CCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHH
Confidence            57899999997663        23588889888 9999999999999999999999999 89999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .++.|++.|+++||+++|+||||||+|||++..
T Consensus       113 ~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~  145 (429)
T KOG0595|consen  113 HFMQQLASALQFLHENNIIHRDLKPQNILLSTT  145 (429)
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence            999999999999999999999999999999765

>KOG0615|consensus

Probab=99.96  E-value=2.3e-29  Score=164.12  Aligned_cols=104  Identities=28%  Similarity=0.462  Sum_probs=95.8

Q ss_pred             CCCcEEEEEEecccc-------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          1 MAGIVVVLEIMSREA-------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         1 ~t~~~~avK~~~~~~-------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      .||+.||||++++..             .++|++++.++ +||||++++++|+..+++|+||||+ ||+|.+.+-.++.+
T Consensus       195 ~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l  273 (475)
T KOG0615|consen  195 KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYL  273 (475)
T ss_pred             ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhcccc
Confidence            489999999995431             23689999999 9999999999999999999999999 99999999998999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .+...+.+++|++.|+.|||++||+||||||+|||+.++
T Consensus       274 ~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~  312 (475)
T KOG0615|consen  274 REDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND  312 (475)
T ss_pred             ccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence            999999999999999999999999999999999999776

>KOG0575|consensus

Probab=99.95  E-value=4.2e-27  Score=159.05  Aligned_cols=109  Identities=31%  Similarity=0.537  Sum_probs=100.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|++.+..         ..+|+++.+.+ +||||++++++|++.+.+|++.|.| .++|..+++.++.++++.+
T Consensus        42 tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEa  120 (592)
T KOG0575|consen   42 TGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEA  120 (592)
T ss_pred             CCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHH
Confidence            79999999997643         33588888888 9999999999999999999999999 8999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-Cccccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA-QRSVGH  111 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~-~~~~~~  111 (114)
                      ..++.|++.|+.|||+.+|+|||||..|++++++ +.++||
T Consensus       121 ry~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgD  161 (592)
T KOG0575|consen  121 RYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGD  161 (592)
T ss_pred             HHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecc
Confidence            9999999999999999999999999999999776 677876

>KOG0611|consensus

Probab=99.94  E-value=2e-27  Score=156.05  Aligned_cols=109  Identities=29%  Similarity=0.489  Sum_probs=98.2

Q ss_pred             CCCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      ++|+.||||.+.++...         +|++++..+ +||||+++|++|++.+...+||||. +|.|++++..++++++..
T Consensus        76 ~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErE  154 (668)
T KOG0611|consen   76 KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSERE  154 (668)
T ss_pred             cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHH
Confidence            47999999999776544         367778888 9999999999999999999999999 999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC-Ccccc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA-QRSVG  110 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~-~~~~~  110 (114)
                      +..++.|+..|+.|+|.++++|||||.+|||++.+ +.++.
T Consensus       155 aRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIA  195 (668)
T KOG0611|consen  155 ARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIA  195 (668)
T ss_pred             HHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeee
Confidence            99999999999999999999999999999999654 44443

>KOG0592|consensus

Probab=99.94  E-value=1.5e-26  Score=155.10  Aligned_cols=108  Identities=21%  Similarity=0.298  Sum_probs=97.6

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      |++.||||+..+...-         .|-..|.++.+||.|+++|--|+++..+|+|+||+ +|+|.+++.+.+.+++..+
T Consensus        97 t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~ca  176 (604)
T KOG0592|consen   97 TGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCA  176 (604)
T ss_pred             CCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHH
Confidence            7899999998655322         35556777779999999999999999999999999 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      +.++.+++.|++|||++||+||||||+|||++.+++..
T Consensus       177 R~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhik  214 (604)
T KOG0592|consen  177 RFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIK  214 (604)
T ss_pred             HHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEE
Confidence            99999999999999999999999999999999988754

>KOG0583|consensus

Probab=99.94  E-value=1.5e-25  Score=148.43  Aligned_cols=108  Identities=39%  Similarity=0.613  Sum_probs=95.4

Q ss_pred             CCcEEEEEEeccc-----c------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSRE-----A------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~-----~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      ||+.||+|+++++     .      ..+|+.++.++..||||+++++++.+...+++||||+ +|+|.+++...+++.+.
T Consensus        41 t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~  120 (370)
T KOG0583|consen   41 TGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKED  120 (370)
T ss_pred             CCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChH
Confidence            6899999987664     1      1147878888844999999999999999999999999 88999999888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC--Cccc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA--QRSV  109 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~--~~~~  109 (114)
                      .+..++.|++.|+.|+|++|++||||||+|+|++..  +.++
T Consensus       121 ~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl  162 (370)
T KOG0583|consen  121 EARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKL  162 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEE
Confidence            999999999999999999999999999999999776  4444

>KOG0598|consensus

Probab=99.93  E-value=7.5e-26  Score=145.73  Aligned_cols=107  Identities=21%  Similarity=0.331  Sum_probs=96.7

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|++++...         ..|..++.+. +||+|+.++-.|++...+|+|+||+ ||.|...++.++.+++..+
T Consensus        49 t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~a  127 (357)
T KOG0598|consen   49 TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRA  127 (357)
T ss_pred             cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHH
Confidence            789999999865531         1366677776 9999999999999999999999999 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      ..++.+++.|+.|||++||+|||+||+|||++..++..
T Consensus       128 rfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~  165 (357)
T KOG0598|consen  128 RFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIK  165 (357)
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEE
Confidence            99999999999999999999999999999999988754

>KOG0581|consensus

Probab=99.93  E-value=2.6e-25  Score=143.40  Aligned_cols=108  Identities=15%  Similarity=0.194  Sum_probs=95.0

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCC-EEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDK-LAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      |++.+|+|.+....       ..+|++++..+ +||+|+.+|+.|...+ ...++|||| +|+|.+++...+++++....
T Consensus       103 t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~  181 (364)
T KOG0581|consen  103 TGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLG  181 (364)
T ss_pred             CCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHH
Confidence            78999999993322       23578888888 9999999999999988 599999999 99999999888999999999


Q ss_pred             HHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC-cccc
Q psy14425         73 KLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      .++.+++.|+.|||. .+|+||||||+|+|++..+ .+++
T Consensus       182 ~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKic  221 (364)
T KOG0581|consen  182 KIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKIC  221 (364)
T ss_pred             HHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEec
Confidence            999999999999996 8999999999999996654 4444

>KOG0610|consensus

Probab=99.93  E-value=3.7e-25  Score=144.64  Aligned_cols=106  Identities=27%  Similarity=0.405  Sum_probs=94.0

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      |+..+|+|+++++...         .|-.+|..+ +||+++.+|..|+++++.|++|||| ||+|..+.+++  +.+++.
T Consensus       101 t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~  179 (459)
T KOG0610|consen  101 TNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSES  179 (459)
T ss_pred             CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchh
Confidence            4578999999776533         255567767 9999999999999999999999999 99999998764  469999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .++.++.+++-|++|||..||++|||||+|||+.++++-
T Consensus       180 ~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI  218 (459)
T KOG0610|consen  180 AARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI  218 (459)
T ss_pred             hHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence            999999999999999999999999999999999888764

>KOG0661|consensus

Probab=99.93  E-value=3.3e-26  Score=151.59  Aligned_cols=110  Identities=24%  Similarity=0.428  Sum_probs=96.2

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCC-EEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDK-LAYLVFPPCSGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +|+.||||.+++....       +|+..++++..||||+++.+++.+.+ .+++|||+|...|+++++.+ ..|++..+.
T Consensus        34 ~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~ir  113 (538)
T KOG0661|consen   34 TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIR  113 (538)
T ss_pred             CCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHH
Confidence            6888999999765322       47888889955999999999998877 99999999999999999765 459999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCCccccc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFC-NAQRSVGH  111 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~-~~~~~~~~  111 (114)
                      .|+.|++.|+.|+|.+|+.|||+||+|||+. ++..++||
T Consensus       114 nim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaD  153 (538)
T KOG0661|consen  114 NIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIAD  153 (538)
T ss_pred             HHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecc
Confidence            9999999999999999999999999999998 66666655

>KOG0600|consensus

Probab=99.92  E-value=1.2e-24  Score=145.07  Aligned_cols=109  Identities=24%  Similarity=0.409  Sum_probs=94.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~~-~~~~~~~   70 (114)
                      ||+.||+|++..+.        ..+||.+|+++ +||||+++.+.....  ..+|+|+|||..+|.-++... -.|++++
T Consensus       141 tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~q  219 (560)
T KOG0600|consen  141 TGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQ  219 (560)
T ss_pred             cCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHH
Confidence            78999999996554        22589999999 999999999998765  789999999999999988653 3699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                      +..+++|++.|++|+|.+|++|||||.+|||+++++ .+++|
T Consensus       220 IKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaD  261 (560)
T KOG0600|consen  220 IKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIAD  261 (560)
T ss_pred             HHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecc
Confidence            999999999999999999999999999999997765 44543

>KOG0582|consensus

Probab=99.92  E-value=6.6e-24  Score=140.00  Aligned_cols=108  Identities=20%  Similarity=0.356  Sum_probs=92.8

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~   71 (114)
                      +++.||||+++.+.-.       +|+..+..+ +||||++++.+|..+..+|+||.+| +|++.++++..  ..+++..+
T Consensus        50 ~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~I  128 (516)
T KOG0582|consen   50 TNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASI  128 (516)
T ss_pred             cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHH
Confidence            5789999999765432       355555544 9999999999999999999999999 99999999764  35999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      ..++++++.|+.|+|++|.+|||+|+.|||++.+|. +++
T Consensus       129 a~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLa  168 (516)
T KOG0582|consen  129 ATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLA  168 (516)
T ss_pred             HHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEc
Confidence            999999999999999999999999999999977654 444

>KOG0588|consensus

Probab=99.91  E-value=2.7e-24  Score=147.23  Aligned_cols=109  Identities=28%  Similarity=0.429  Sum_probs=95.6

Q ss_pred             CCCcEEEEEEeccc---------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSRE---------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~---------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      .||+.+|||++.+.         ..+.|+.++. +++|||++++|+++++...+|++.||+ +|.|.+++-..+++++..
T Consensus        35 ~TGqlaaiKii~k~~~~s~s~~~~IerEIviMk-Li~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~e  113 (786)
T KOG0588|consen   35 ETGQLAAIKIIPKRSELSSSQPAGIEREIVIMK-LIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPERE  113 (786)
T ss_pred             cccceeEEEeeccccccccccccchhhhhHHHH-HhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHH
Confidence            58999999999765         2334665554 559999999999999999999999999 999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      +..++.|++.|+.|+|.-+++|||+||+|+|++..+ .+++
T Consensus       114 aa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIA  154 (786)
T KOG0588|consen  114 AAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIA  154 (786)
T ss_pred             HHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeee
Confidence            999999999999999999999999999999996544 4443

>KOG0599|consensus

Probab=99.91  E-value=1.5e-24  Score=136.52  Aligned_cols=106  Identities=30%  Similarity=0.470  Sum_probs=94.5

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      ||..+|+|++....              ..+|+.++++..+||+|+.+.++|+++.++++|+|.| .|.|.+++.+.-.+
T Consensus        41 t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~Vtl  120 (411)
T KOG0599|consen   41 TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTL  120 (411)
T ss_pred             cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheee
Confidence            78899999984321              1136888999999999999999999999999999999 89999999887789


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.....+++|+.+|++|+|.++++|||+||+|||++++..
T Consensus       121 SEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~  161 (411)
T KOG0599|consen  121 SEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMN  161 (411)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccc
Confidence            99999999999999999999999999999999999965543

>KOG0616|consensus

Probab=99.91  E-value=3.9e-24  Score=135.20  Aligned_cols=105  Identities=23%  Similarity=0.356  Sum_probs=95.5

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||..||+|.++++..-         +|..++... .||+++++++.|.+.+.++++|||+ ||.+..++++.++++++.+
T Consensus        68 ~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~a  146 (355)
T KOG0616|consen   68 SGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHA  146 (355)
T ss_pred             CCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhH
Confidence            6889999999766422         356667777 8999999999999999999999999 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.++.|++.|++|||++++++||+||+|||++..+.
T Consensus       147 rFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~  182 (355)
T KOG0616|consen  147 RFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH  182 (355)
T ss_pred             HHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc
Confidence            999999999999999999999999999999988764

>KOG0659|consensus

Probab=99.91  E-value=5.9e-24  Score=132.68  Aligned_cols=109  Identities=20%  Similarity=0.280  Sum_probs=95.7

Q ss_pred             CCCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy14425          1 MAGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEA   71 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~   71 (114)
                      .||+.||||+++.....        +|+..+..+ +|+||+.+.++|...+.+.+|+||+..+|...++.. ..++...+
T Consensus        25 ~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~i  103 (318)
T KOG0659|consen   25 ETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADI  103 (318)
T ss_pred             CCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHH
Confidence            48999999999755432        488888877 999999999999999999999999999999999764 45899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      ..++.+++.|++|+|.+.++|||+||.|+|++.++ .+++
T Consensus       104 K~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiA  143 (318)
T KOG0659|consen  104 KSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIA  143 (318)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEee
Confidence            99999999999999999999999999999996654 4454

>KOG0192|consensus

Probab=99.91  E-value=1.3e-23  Score=138.59  Aligned_cols=103  Identities=23%  Similarity=0.262  Sum_probs=91.8

Q ss_pred             CcE-EEEEEeccc--------cchhHHHHHhhhCCCCCcceEEEEEEcCC-EEEEEecCC-CCCHHHHHHh--CCCCCHH
Q psy14425          3 GIV-VVLEIMSRE--------ASGNLLSAHYRLDSHPHINSLHEVLLGDK-LAYLVFPPC-SGDLHSYVRQ--RKRLKEA   69 (114)
Q Consensus         3 ~~~-~avK~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~v~e~~-~~~l~~~~~~--~~~~~~~   69 (114)
                      |+. +|+|.+...        ...+|+.++.++ +||||+++++++.... .+++||||+ +|+|.+++..  ...++..
T Consensus        64 g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~  142 (362)
T KOG0192|consen   64 GTDVVAVKIISDPDFDDESRKAFRREASLLSRL-RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLK  142 (362)
T ss_pred             CceeEEEEEecchhcChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHH
Confidence            455 999999754        344678888887 9999999999998877 799999999 9999999976  5679999


Q ss_pred             HHHHHHHHHHHHHHHHHHCC-CccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQG-IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~-i~h~~lk~~nil~~~~~  106 (114)
                      ....++.+++.||.|+|+++ ++||||||+|+|++.+.
T Consensus       143 ~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~  180 (362)
T KOG0192|consen  143 VRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG  180 (362)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC
Confidence            99999999999999999999 99999999999998875

>KOG0605|consensus

Probab=99.91  E-value=2e-23  Score=139.88  Aligned_cols=106  Identities=16%  Similarity=0.233  Sum_probs=95.0

Q ss_pred             CCCcEEEEEEeccccchh---------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREASGN---------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~~---------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      .||..||+|+++++....         |-++|.. .++|+|+++|-.|++...+|++|||+ ||++.+++...+.+++..
T Consensus       164 ~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~  242 (550)
T KOG0605|consen  164 DTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDW  242 (550)
T ss_pred             cCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHH
Confidence            389999999998765332         3334555 49999999999999999999999999 999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.++.+++.|+..+|+.|++||||||+|+|++..|+
T Consensus       243 arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH  279 (550)
T KOG0605|consen  243 ARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH  279 (550)
T ss_pred             HHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC
Confidence            9999999999999999999999999999999988775

>KOG0593|consensus

Probab=99.90  E-value=3e-24  Score=136.37  Aligned_cols=105  Identities=17%  Similarity=0.291  Sum_probs=92.2

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      ||+.||||++-.+..        -+|++++.++ +|||++.+.++|.....+++|+|||..++.+.+... ...+...+.
T Consensus        26 TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk  104 (396)
T KOG0593|consen   26 TGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVK  104 (396)
T ss_pred             cccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHH
Confidence            899999999853322        1478888888 999999999999999999999999988888887664 459999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|+++++||||||+|||++..+.
T Consensus       105 ~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gv  139 (396)
T KOG0593|consen  105 KYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGV  139 (396)
T ss_pred             HHHHHHHHHhhhhhhcCeecccCChhheEEecCCc
Confidence            99999999999999999999999999999977653

>KOG0198|consensus

Probab=99.90  E-value=3.8e-23  Score=133.59  Aligned_cols=103  Identities=21%  Similarity=0.283  Sum_probs=91.4

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCC--EEEEEecCC-CCCHHHHHHhCC-CCCHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDK--LAYLVFPPC-SGDLHSYVRQRK-RLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~   71 (114)
                      +|+..|+|......      .++|+.++.++ +||||+++++......  .+++.|||+ +|+|.+++...+ .++++.+
T Consensus        41 ~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v  119 (313)
T KOG0198|consen   41 TGELMAVKSVELEDSPTSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLV  119 (313)
T ss_pred             CCcceeeeeeecccchhHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHH
Confidence            47899999987653      46789999999 6999999999754444  699999999 999999998766 7999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      +.+..|++.|+.|+|++|++|+||||+|||+++.
T Consensus       120 ~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~  153 (313)
T KOG0198|consen  120 RRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS  153 (313)
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC
Confidence            9999999999999999999999999999999883

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.90  E-value=7.2e-23  Score=135.55  Aligned_cols=105  Identities=14%  Similarity=0.229  Sum_probs=92.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|..++.++ +|+|++++++.+.+.+.++++|||+ +++|.+++...+.+++..+
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~  103 (363)
T cd05628          25 TGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEET  103 (363)
T ss_pred             CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHH
Confidence            68899999996532         12356666666 9999999999999999999999999 8899999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       104 ~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~  139 (363)
T cd05628         104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH  139 (363)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCC
Confidence            999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=7.4e-23  Score=135.36  Aligned_cols=105  Identities=14%  Similarity=0.262  Sum_probs=92.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|+.++..+ +||||++++++|.+++.++++|||+ +++|.+++...+.+++..+
T Consensus        25 ~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~  103 (364)
T cd05599          25 TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEET  103 (364)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHH
Confidence            58899999996532         12366677777 8999999999999999999999999 8999999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       104 ~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~  139 (364)
T cd05599         104 RFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGH  139 (364)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC
Confidence            999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0594|consensus

Probab=99.90  E-value=2e-22  Score=129.46  Aligned_cols=104  Identities=29%  Similarity=0.395  Sum_probs=91.9

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCC-cceEEEEEEcCC------EEEEEecCCCCCHHHHHHhCC--
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPH-INSLHEVLLGDK------LAYLVFPPCSGDLHSYVRQRK--   64 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~-i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~~~~--   64 (114)
                      ||+.||+|++..+..        ..|+..+..+ +|+| ++.+++++.+.+      .+++++|++..+|.+++....  
T Consensus        35 ~g~~VALKkirl~~~~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~  113 (323)
T KOG0594|consen   35 TGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKK  113 (323)
T ss_pred             CCCEEEEEEEeccccccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhcccc
Confidence            689999999965543        2578888888 9998 999999998877      899999999999999997644  


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 --RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 --~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                        .++...++.++.|++.|+.|||+++|+||||||+|+++++.+
T Consensus       114 ~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G  157 (323)
T KOG0594|consen  114 PQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG  157 (323)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC
Confidence              588889999999999999999999999999999999998754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.90  E-value=1.3e-22  Score=132.49  Aligned_cols=104  Identities=19%  Similarity=0.266  Sum_probs=91.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.++...         ...|+..+.++ +|||+++++++|...+.++++|||+ +++|.+.+...+.+++..+
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   97 (323)
T cd05571          19 TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA   97 (323)
T ss_pred             CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            68899999986532         11356666666 9999999999999999999999999 8899999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus        98 ~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~  132 (323)
T cd05571          98 RFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG  132 (323)
T ss_pred             HHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.3e-22  Score=134.94  Aligned_cols=104  Identities=16%  Similarity=0.239  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.+..         ...|+.++.++ +||||++++++|.+.+.++++|||+ +++|.+++...+.+++..+
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  103 (377)
T cd05629          25 TGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVT  103 (377)
T ss_pred             CCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            68899999985432         22366666666 9999999999999999999999999 8999999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       104 ~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~  138 (377)
T cd05629         104 RFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG  138 (377)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC
Confidence            99999999999999999999999999999996654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=1.8e-22  Score=135.01  Aligned_cols=104  Identities=18%  Similarity=0.304  Sum_probs=95.4

Q ss_pred             CCcEEEEEEeccccchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET   81 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (114)
                      |++.||+|........+|+.++.++ +||||++++++|......++++|++.++|..++.....++...+..++.|++.|
T Consensus       116 ~~~~vaiK~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~a  194 (391)
T PHA03212        116 TCEHVVIKAGQRGGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRA  194 (391)
T ss_pred             CCCEEEEechhhhhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            6889999988777777899988888 999999999999999999999999988999988777789999999999999999


Q ss_pred             HHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         82 VRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        82 l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|+|++|++||||||+||+++..+
T Consensus       195 L~ylH~~~IvHrDiKP~NIll~~~~  219 (391)
T PHA03212        195 IQYLHENRIIHRDIKAENIFINHPG  219 (391)
T ss_pred             HHHHHhCCcccCCCChHhEEEcCCC
Confidence            9999999999999999999997654

>KOG0586|consensus

Probab=99.89  E-value=4.9e-23  Score=139.64  Aligned_cols=110  Identities=31%  Similarity=0.518  Sum_probs=98.8

Q ss_pred             CCCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          1 MAGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      .||..||+|.+++....        +|++++..+ +||||++++++.+++..+|+||||+ +|.+.+++...++..+...
T Consensus        79 ~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~a  157 (596)
T KOG0586|consen   79 LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEA  157 (596)
T ss_pred             CCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhh
Confidence            37899999999776532        477778877 9999999999999999999999999 9999999999999888999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                      ..++.|+..+++|+|+++++|||||++|++++.+. .+++|
T Consensus       158 r~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaD  198 (596)
T KOG0586|consen  158 RAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIAD  198 (596)
T ss_pred             hhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeec
Confidence            99999999999999999999999999999997765 66654

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.89  E-value=1.7e-22  Score=132.27  Aligned_cols=104  Identities=19%  Similarity=0.315  Sum_probs=92.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|+.++.++ +||||+++++++...+..+++|||+ +++|.+.+...+.++...+
T Consensus        42 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  120 (329)
T PTZ00263         42 TGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVA  120 (329)
T ss_pred             CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHH
Confidence            57899999986432         22467777777 9999999999999999999999999 8899999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       121 ~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~  155 (329)
T PTZ00263        121 KFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG  155 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

>KOG0607|consensus

Probab=99.89  E-value=6.2e-24  Score=136.02  Aligned_cols=106  Identities=27%  Similarity=0.416  Sum_probs=96.8

Q ss_pred             CCCcEEEEEEeccc------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          1 MAGIVVVLEIMSRE------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         1 ~t~~~~avK~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      .||..||||++.+.      ..-+|++++.++-+|+||+++.++|+++...|+|||-+ ||++...+.++..+++..+..
T Consensus       101 ~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~  180 (463)
T KOG0607|consen  101 QTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASR  180 (463)
T ss_pred             ccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHH
Confidence            47899999999754      23468889999999999999999999999999999999 999999998889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++.++.|+.+||.+||.|||+||+|||....+
T Consensus       181 vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn  213 (463)
T KOG0607|consen  181 VVKDIASALDFLHTKGIAHRDLKPENILCESPN  213 (463)
T ss_pred             HHHHHHHHHHHHhhcCcccccCCccceeecCCC
Confidence            999999999999999999999999999995543

>KOG0585|consensus

Probab=99.89  E-value=5.7e-23  Score=136.60  Aligned_cols=107  Identities=26%  Similarity=0.448  Sum_probs=87.0

Q ss_pred             CCcEEEEEEecccc--------------------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------------------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHS   58 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~   58 (114)
                      +|+.||+|++.+..                    ..+|+.++.++ .||||++++++.-+  .+.+|+|+||| .|.+..
T Consensus       121 ~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w  199 (576)
T KOG0585|consen  121 DGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW  199 (576)
T ss_pred             CCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEEEeecCcccCceEEEEEeccCCcccc
Confidence            57899999995432                    22478899999 99999999999864  46799999999 665543


Q ss_pred             HHHhCCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         59 YVRQRKR-LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        59 ~~~~~~~-~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      . ..... ++..+++.++..++.|++|||.+|++||||||+|+|++.++. +++
T Consensus       200 ~-p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs  252 (576)
T KOG0585|consen  200 C-PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS  252 (576)
T ss_pred             C-CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEee
Confidence            3 23334 899999999999999999999999999999999999976653 343

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.89  E-value=2.3e-22  Score=131.39  Aligned_cols=104  Identities=18%  Similarity=0.274  Sum_probs=91.2

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.....         ..|+..+.++ +|||+++++++|...+..+++|||+ +++|...+...+.+++..+
T Consensus        19 ~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~   97 (323)
T cd05595          19 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA   97 (323)
T ss_pred             CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            578999999865321         1356666666 9999999999999999999999999 8899998877778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++||||||+||++++++
T Consensus        98 ~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  132 (323)
T cd05595          98 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG  132 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.89  E-value=2.4e-22  Score=133.78  Aligned_cols=104  Identities=14%  Similarity=0.176  Sum_probs=91.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+....         ...|+.++..+ +||||+++++.|.+.+.++++|||+ +|+|.+++...+.+++..+
T Consensus        25 ~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~  103 (382)
T cd05625          25 TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLA  103 (382)
T ss_pred             CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            67899999986532         22366666776 9999999999999999999999999 8899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+|||++.++
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g  138 (382)
T cd05625         104 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG  138 (382)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.89  E-value=2.4e-22  Score=133.48  Aligned_cols=104  Identities=13%  Similarity=0.181  Sum_probs=92.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|+.++..+ +|+||+++++.|...+.++++|||+ +++|.+++...+.++...+
T Consensus        25 ~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~  103 (376)
T cd05598          25 TNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLA  103 (376)
T ss_pred             CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            68899999985432         22467777777 9999999999999999999999999 8999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       104 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~  138 (376)
T cd05598         104 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG  138 (376)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.89  E-value=2.5e-22  Score=133.73  Aligned_cols=104  Identities=13%  Similarity=0.175  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|+.++..+ +|||++++++++.+.+.++++|||+ +|+|.+++...+.+++..+
T Consensus        25 ~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~  103 (381)
T cd05626          25 THALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLA  103 (381)
T ss_pred             CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence            67899999996532         12356667766 9999999999999999999999999 8899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|.+|++||||||+||+++..+
T Consensus       104 ~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~  138 (381)
T cd05626         104 RFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG  138 (381)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.89  E-value=3.5e-22  Score=130.83  Aligned_cols=105  Identities=21%  Similarity=0.346  Sum_probs=91.5

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+++...         ..|..++.++.+||||++++++|...+.++++|||+ +++|.+.+...+.+++..+
T Consensus        19 ~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~   98 (329)
T cd05588          19 TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHA   98 (329)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence            578999999975421         134555666668999999999999999999999999 8899998877788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~  133 (329)
T cd05588          99 RFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG  133 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.89  E-value=3e-22  Score=130.48  Aligned_cols=104  Identities=20%  Similarity=0.351  Sum_probs=91.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.+|+|.+....        ...|+..+.++ +||||+++++++...+..+++|||+ +++|.+.+.....+++..+.
T Consensus        23 ~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  101 (318)
T cd05582          23 AGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK  101 (318)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHH
Confidence            57899999986532        12366677777 9999999999999999999999999 89999999777789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++||||||+||+++.++
T Consensus       102 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  135 (318)
T cd05582         102 FYLAELALALDHLHSLGIIYRDLKPENILLDEEG  135 (318)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC
Confidence            9999999999999999999999999999997654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=3.2e-22  Score=130.09  Aligned_cols=104  Identities=16%  Similarity=0.219  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+....         ...|+..+.++ +||||+++++++...+..+++|||+ +++|.+++...+.++....
T Consensus        17 ~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   95 (312)
T cd05585          17 TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRA   95 (312)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHH
Confidence            57889999986432         11356667776 9999999999999999999999999 8999999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus        96 ~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~  130 (312)
T cd05585          96 RFYTAELLCALENLHKFNVIYRDLKPENILLDYQG  130 (312)
T ss_pred             HHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.89  E-value=4.8e-22  Score=130.15  Aligned_cols=104  Identities=20%  Similarity=0.258  Sum_probs=90.8

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.....         ..|+..+..+ +|||++++++++...+..+++|||+ +++|...+...+.+++..+
T Consensus        19 ~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~   97 (328)
T cd05593          19 SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRT   97 (328)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHH
Confidence            588999999965421         1355666666 9999999999999999999999999 8899988877778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+++++||||||+|||++.++
T Consensus        98 ~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~  132 (328)
T cd05593          98 RFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG  132 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=5.5e-22  Score=129.91  Aligned_cols=104  Identities=23%  Similarity=0.283  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.++...         ...|+..+..+ +||||+++++++...+..+++|||+ +++|.+++...+.+++..+
T Consensus        25 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~  103 (333)
T cd05600          25 TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHA  103 (333)
T ss_pred             CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence            58899999986542         12356666667 8999999999999999999999999 8999999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       104 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  138 (333)
T cd05600         104 RFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG  138 (333)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.6e-22  Score=130.32  Aligned_cols=104  Identities=22%  Similarity=0.298  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+....         ..+|+..+.++ +||||+++++++.+.+.++++|||+ +++|.+++...+.+++...
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  103 (291)
T cd05612          25 SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTG  103 (291)
T ss_pred             CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence            68899999986432         22467777777 9999999999999999999999999 8899999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||+|+||+++.++
T Consensus       104 ~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~  138 (291)
T cd05612         104 LFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG  138 (291)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.89  E-value=4.8e-22  Score=129.71  Aligned_cols=105  Identities=21%  Similarity=0.323  Sum_probs=90.9

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.+...         ..|...+....+|||+++++++|...+.++++|||+ +++|.+.+.....+++..+
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~   98 (320)
T cd05590          19 SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA   98 (320)
T ss_pred             CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHH
Confidence            578999999865321         124555555558999999999999999999999999 8899999887788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus        99 ~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~  133 (320)
T cd05590          99 RFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG  133 (320)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0663|consensus

Probab=99.88  E-value=2.4e-22  Score=128.99  Aligned_cols=109  Identities=22%  Similarity=0.340  Sum_probs=94.0

Q ss_pred             CCCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHhC-CCCCHH
Q psy14425          1 MAGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQR-KRLKEA   69 (114)
Q Consensus         1 ~t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~~-~~~~~~   69 (114)
                      .|++.||+|.++.+.        .-+|++++.++ +||||+.+-++.+..  +.+|+||||+..+|..++..- .++...
T Consensus        99 ~t~eIVALKr~kmekek~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~  177 (419)
T KOG0663|consen   99 KTDEIVALKRLKMEKEKEGFPITSLREINILLKA-RHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPG  177 (419)
T ss_pred             CcceeEEeeecccccccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchH
Confidence            378999999997654        22589999999 899999999998744  679999999999999999764 479999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      .++.++.|++.|+.|||.+.++||||||+|+|+++.+ .+++
T Consensus       178 evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKia  219 (419)
T KOG0663|consen  178 EVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIA  219 (419)
T ss_pred             HHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEec
Confidence            9999999999999999999999999999999996655 4444

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.88  E-value=9.3e-22  Score=128.53  Aligned_cols=104  Identities=19%  Similarity=0.264  Sum_probs=89.9

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.....         ..|...+..+ +||||++++++|...+.+++||||+ +++|...+.....+++..+
T Consensus        19 ~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~   97 (325)
T cd05594          19 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA   97 (325)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            688999999865421         1245555555 9999999999999999999999999 8899998877778999999


Q ss_pred             HHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+ +|++||||||+||+++.++
T Consensus        98 ~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~  133 (325)
T cd05594          98 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG  133 (325)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC
Confidence            9999999999999997 7999999999999997665

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.88  E-value=6.4e-22  Score=130.88  Aligned_cols=105  Identities=13%  Similarity=0.237  Sum_probs=91.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|...+..+ +||+++++++.|.+.+.++++|||+ +++|.+++...+.+++..+
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~  103 (360)
T cd05627          25 TGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEAT  103 (360)
T ss_pred             CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHH
Confidence            68899999986432         12355566666 9999999999999999999999999 8999999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++.
T Consensus       104 ~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~  139 (360)
T cd05627         104 QFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH  139 (360)
T ss_pred             HHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC
Confidence            999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.88  E-value=6.7e-22  Score=129.03  Aligned_cols=105  Identities=17%  Similarity=0.305  Sum_probs=90.8

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.....         ..|..++....+||||++++++|...+.++++|||+ +++|...+.....+++...
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~   98 (321)
T cd05591          19 TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRS   98 (321)
T ss_pred             CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            578999999865421         124555555568999999999999999999999999 8899998887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++
T Consensus        99 ~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~  133 (321)
T cd05591          99 RFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG  133 (321)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.88  E-value=7.3e-22  Score=129.33  Aligned_cols=105  Identities=21%  Similarity=0.356  Sum_probs=91.4

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+.+...         ..|...+.+..+|||++++++++...+.++++|||+ +++|...+...+.+++...
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~   98 (329)
T cd05618          19 TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA   98 (329)
T ss_pred             CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence            578999999975421         134555666668999999999999999999999999 8899988877778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus        99 ~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~  133 (329)
T cd05618          99 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG  133 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.88  E-value=8.6e-22  Score=128.70  Aligned_cols=105  Identities=20%  Similarity=0.281  Sum_probs=89.4

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+......         .|...+.+..+||||+++++.+...+.++++|||+ +++|...+...+.+++..+
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   98 (325)
T cd05604          19 DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRA   98 (325)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence            5789999998643211         12333344459999999999999999999999999 8899988887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus        99 ~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~  133 (325)
T cd05604          99 RFYAAEIASALGYLHSINIVYRDLKPENILLDSQG  133 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.88  E-value=6.4e-22  Score=129.24  Aligned_cols=104  Identities=19%  Similarity=0.293  Sum_probs=91.1

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|+.||+|.+....          ...|+.++..+ +||||++++++|..++..+++|||+ +++|.+.+...+.+++..
T Consensus        23 ~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  101 (323)
T cd05584          23 TGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDT  101 (323)
T ss_pred             CCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHH
Confidence            57889999986432          12366667777 9999999999999999999999999 889999998778889999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       102 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  137 (323)
T cd05584         102 ACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG  137 (323)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0032|consensus

Probab=99.88  E-value=8.2e-22  Score=130.99  Aligned_cols=105  Identities=26%  Similarity=0.465  Sum_probs=93.9

Q ss_pred             CCCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      .||+.+|+|.+++..         ..+|+.++.++.+|||++.+++.|++.+.+++|||++ ||.|.+.+... .+++..
T Consensus        58 ~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~d  136 (382)
T KOG0032|consen   58 STGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERD  136 (382)
T ss_pred             CCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHH
Confidence            368999999996443         3358889999966999999999999999999999999 99999999765 599999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.++.|+|+.|++|||+||+|+|+....
T Consensus       137 a~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~  172 (382)
T KOG0032|consen  137 AAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD  172 (382)
T ss_pred             HHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc
Confidence            999999999999999999999999999999996553

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.88  E-value=7.8e-22  Score=128.56  Aligned_cols=105  Identities=17%  Similarity=0.202  Sum_probs=90.7

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.++....         ..|...+....+|||+++++++|...+.++++|||+ +++|...+...+.++....
T Consensus        19 ~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~   98 (316)
T cd05620          19 KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRA   98 (316)
T ss_pred             CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHH
Confidence            678999999965421         124445555568999999999999999999999999 8899999887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~  133 (316)
T cd05620          99 TFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG  133 (316)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.88  E-value=8.1e-22  Score=128.73  Aligned_cols=105  Identities=20%  Similarity=0.288  Sum_probs=89.3

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+......         .|...+.+..+|||++++++.+...+..+++|||+ +++|..++...+.+++...
T Consensus        19 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~   98 (323)
T cd05575          19 DGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRA   98 (323)
T ss_pred             CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHH
Confidence            6889999998653211         12233334459999999999999999999999999 8899999887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++
T Consensus        99 ~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~  133 (323)
T cd05575          99 RFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG  133 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.88  E-value=8.3e-22  Score=128.42  Aligned_cols=105  Identities=20%  Similarity=0.250  Sum_probs=89.9

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.++....         ..|...+....+||||+++++++...+.++++|||+ +++|...+...+.++....
T Consensus        19 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~   98 (316)
T cd05592          19 TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARA   98 (316)
T ss_pred             CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence            578899999865421         113344444558999999999999999999999999 8999999887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+++++||||||+||+++.++
T Consensus        99 ~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~  133 (316)
T cd05592          99 RFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG  133 (316)
T ss_pred             HHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.88  E-value=1.4e-21  Score=127.94  Aligned_cols=106  Identities=22%  Similarity=0.338  Sum_probs=92.0

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+.+...         ..|..++.++.+||+++.+++++...+.++++||++ +++|...+...+.+++..+
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~   98 (327)
T cd05617          19 NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHA   98 (327)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            578899999975421         135556666668999999999999999999999999 8999998877778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++.
T Consensus        99 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~  134 (327)
T cd05617          99 RFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGH  134 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCC
Confidence            999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0597|consensus

Probab=99.88  E-value=2e-22  Score=136.67  Aligned_cols=105  Identities=19%  Similarity=0.286  Sum_probs=94.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      |.+.||+|.+.+..        ..+|++++..+ +||||+..+++|++..++|+|+||+.|+|.+++...+.++++.++.
T Consensus        26 t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~  104 (808)
T KOG0597|consen   26 TIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRA  104 (808)
T ss_pred             ceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEEehhhhhhHHHHHHhccCCCHHHHHH
Confidence            67899999996543        23467778888 9999999999999999999999999779999999889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..+++.|+.|||+++++|||+||+|||+..++.
T Consensus       105 ~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~  138 (808)
T KOG0597|consen  105 IAYDLVSALYYLHSNRILHRDMKPQNILLEKGGT  138 (808)
T ss_pred             HHHHHHHHHHHHHhcCcccccCCcceeeecCCCc
Confidence            9999999999999999999999999999966553

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.88  E-value=1.7e-21  Score=125.37  Aligned_cols=104  Identities=22%  Similarity=0.328  Sum_probs=90.1

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC-CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~-~~~~~~~~~   73 (114)
                      +++.||+|.++...       ..+|+.++.++ +|||++++++++...+..+++||++.++|.+++...+ .++...+..
T Consensus        29 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~  107 (288)
T cd07871          29 TENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKI  107 (288)
T ss_pred             CCCEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHH
Confidence            67899999986432       22577778777 9999999999999999999999999779999886544 478999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       108 ~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~  140 (288)
T cd07871         108 FMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG  140 (288)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.88  E-value=1.9e-21  Score=125.88  Aligned_cols=104  Identities=22%  Similarity=0.315  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+..+ +|||++++++++.+++..+++|||+.+++.+.+... +.++...+..
T Consensus        29 ~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  107 (303)
T cd07869          29 NGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKL  107 (303)
T ss_pred             CCCEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHH
Confidence            57899999986432       22477777777 999999999999999999999999988888887653 5689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++||||||+||+++..+
T Consensus       108 ~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  140 (303)
T cd07869         108 FLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG  140 (303)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0660|consensus

Probab=99.88  E-value=1.2e-22  Score=130.73  Aligned_cols=108  Identities=21%  Similarity=0.300  Sum_probs=92.6

Q ss_pred             CCcEEEEEEeccc--------cchhHHHHHhhhCCCCCcceEEEEEEc-----CCEEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSRE--------ASGNLLSAHYRLDSHPHINSLHEVLLG-----DKLAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|++...        ...+|+..+..+ +|+||+.+.+++..     -+.+|+|+|+|+.+|.+.++.+..++.
T Consensus        46 t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~L~d  124 (359)
T KOG0660|consen   46 TGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQDLTD  124 (359)
T ss_pred             CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCccccH
Confidence            7899999998632        122578877777 89999999999965     357999999999999999988777999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      ..++.++.|++.|+.|+|+.|++|||+||.|++++.+. .+++
T Consensus       125 ~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~  167 (359)
T KOG0660|consen  125 DHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKIC  167 (359)
T ss_pred             HHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEec
Confidence            99999999999999999999999999999999996643 3443

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.3e-21  Score=128.01  Aligned_cols=105  Identities=20%  Similarity=0.236  Sum_probs=89.4

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhC--CCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLD--SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~--~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.||+|.+......         .+..++.+..  +||+++.+++.|...+.++++|||+ +++|...+...+.+++.
T Consensus        17 ~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~   96 (330)
T cd05586          17 TRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSED   96 (330)
T ss_pred             CCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHH
Confidence            5889999998653211         1333444443  7999999999999999999999999 88999998887889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus        97 ~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~  133 (330)
T cd05586          97 RAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG  133 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            9999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.88  E-value=2.5e-21  Score=126.56  Aligned_cols=104  Identities=16%  Similarity=0.247  Sum_probs=89.0

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      ||+.||+|.++....        ..|+..+..+ +||||++++++|..++..++++||+ ++++.+++...  ..+++..
T Consensus        24 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~  102 (327)
T cd08227          24 TGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELA  102 (327)
T ss_pred             cCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHH
Confidence            688999999865421        1355555555 9999999999999999999999999 88999998653  4589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus       103 ~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~  138 (327)
T cd08227         103 IAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG  138 (327)
T ss_pred             HHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC
Confidence            999999999999999999999999999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.88  E-value=1.3e-21  Score=128.80  Aligned_cols=102  Identities=19%  Similarity=0.234  Sum_probs=89.8

Q ss_pred             cEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          4 IVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      ..||+|.+....         ...|+..+..+ +||||+++++++...+.++++|||+ +++|.+++...+.+++..+..
T Consensus        57 ~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~  135 (340)
T PTZ00426         57 PPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCF  135 (340)
T ss_pred             eEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHH
Confidence            579999885432         12366667777 9999999999999999999999999 899999998878899999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++||||||+|||++.++
T Consensus       136 ~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~  168 (340)
T PTZ00426        136 YAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG  168 (340)
T ss_pred             HHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence            999999999999999999999999999997655

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.88  E-value=1.5e-21  Score=127.30  Aligned_cols=105  Identities=18%  Similarity=0.272  Sum_probs=88.7

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.+....         .|...+.+..+|||++++++.|...+..+++|||+ +++|...+.....+++...
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   98 (321)
T cd05603          19 DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRA   98 (321)
T ss_pred             CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence            5788999998643211         12333344459999999999999999999999999 8899988877778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+++++||||||+||+++.++
T Consensus        99 ~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~  133 (321)
T cd05603          99 RFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG  133 (321)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.88  E-value=1.7e-21  Score=127.53  Aligned_cols=105  Identities=20%  Similarity=0.329  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|+.||+|.+.+..          ...|+..+..+.+|++++.++++|...+.++++|||+ +++|.+.+.....+++..
T Consensus        27 ~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~  106 (332)
T cd05614          27 TGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDE  106 (332)
T ss_pred             CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHH
Confidence            57889999986432          1235667777767999999999999999999999999 889999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|++|++||||||+|||++.++
T Consensus       107 ~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~  142 (332)
T cd05614         107 VRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG  142 (332)
T ss_pred             HHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=7.1e-22  Score=129.91  Aligned_cols=105  Identities=18%  Similarity=0.271  Sum_probs=92.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|...+..+ +|||++++++++..++..+++|||+ +++|.+++...+.++....
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  103 (350)
T cd05573          25 TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETA  103 (350)
T ss_pred             CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence            68899999986532         12356666666 8999999999999999999999999 8899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++.
T Consensus       104 ~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~  139 (350)
T cd05573         104 RFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGH  139 (350)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC
Confidence            999999999999999999999999999999977653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.88  E-value=1.8e-21  Score=126.89  Aligned_cols=105  Identities=17%  Similarity=0.201  Sum_probs=90.5

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.++....         ..|...+....+|||++++++++.+.+.++++|||+ +++|.+.+.....++....
T Consensus        19 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~   98 (316)
T cd05619          19 TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRA   98 (316)
T ss_pred             CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            578899999865421         124445555569999999999999999999999999 8999999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus        99 ~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~  133 (316)
T cd05619          99 TFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG  133 (316)
T ss_pred             HHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.88  E-value=1.7e-21  Score=127.03  Aligned_cols=106  Identities=20%  Similarity=0.317  Sum_probs=91.3

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+.+...         ..|..++..+.+|||++++++++...+.++++|||+ +++|...+...+.+++...
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~   98 (318)
T cd05570          19 TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRA   98 (318)
T ss_pred             CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence            578999999875421         124555555558999999999999999999999999 8899998887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||+++++|+||||+||+++.++.
T Consensus        99 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~  134 (318)
T cd05570          99 RFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGH  134 (318)
T ss_pred             HHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCc
Confidence            999999999999999999999999999999976543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0580|consensus

Probab=99.88  E-value=4.6e-23  Score=127.08  Aligned_cols=105  Identities=23%  Similarity=0.390  Sum_probs=91.0

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHH--hCCCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVR--QRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~--~~~~~~~~   69 (114)
                      |+-.+|+|++.++...         +|+++...+ +||||.++|++|.+....|+++||. .|++...+.  ...++++.
T Consensus        46 s~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~  124 (281)
T KOG0580|consen   46 SLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQ  124 (281)
T ss_pred             CCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccccccccc
Confidence            5678999998765433         345556667 9999999999999999999999999 899999997  44679999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..+.++.|++.|+.|+|.++++|||+||+|+|++..+.
T Consensus       125 ~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~  162 (281)
T KOG0580|consen  125 RAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGE  162 (281)
T ss_pred             chhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCC
Confidence            99999999999999999999999999999999966543

>KOG0658|consensus

Probab=99.87  E-value=2.4e-22  Score=129.59  Aligned_cols=105  Identities=19%  Similarity=0.213  Sum_probs=88.9

Q ss_pred             CCcEEEEEEecc--ccchhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHh----CCCCCHHH
Q psy14425          2 AGIVVVLEIMSR--EASGNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQ----RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~--~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~----~~~~~~~~   70 (114)
                      |++.+|||..-.  .....|+.++..+ .||||+++.-+|...     -+..+||||++.+|.+.++.    +..++...
T Consensus        48 ~~~~vAIKKv~~d~r~knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~  126 (364)
T KOG0658|consen   48 TEEEVAIKKVLQDKRYKNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLE  126 (364)
T ss_pred             CCceeEEEEecCCCCcCcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceee
Confidence            468999999843  3455688888866 999999998787632     25678999999999999874    46689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.+..|+.+|+.|||+.||+||||||+|+|++.+..
T Consensus       127 iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg  163 (364)
T KOG0658|consen  127 IKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTG  163 (364)
T ss_pred             eHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCC
Confidence            9999999999999999999999999999999988754

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.87  E-value=2.6e-21  Score=128.63  Aligned_cols=103  Identities=18%  Similarity=0.226  Sum_probs=88.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+.+..         ...|..++..+ +|||++++++++.+++.++++|||+ +++|.+++.. ..++....
T Consensus        67 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~~~  144 (370)
T cd05621          67 SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWA  144 (370)
T ss_pred             CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHH
Confidence            57899999986421         11355555555 9999999999999999999999999 8999998865 46899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+++++||||||+|||++.++
T Consensus       145 ~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~  179 (370)
T cd05621         145 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG  179 (370)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.87  E-value=3e-21  Score=126.18  Aligned_cols=105  Identities=20%  Similarity=0.255  Sum_probs=88.2

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+......         .+...+.+..+||||+++++++...+.++++||++ +++|.+.+...+.++...+
T Consensus        19 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~   98 (325)
T cd05602          19 EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA   98 (325)
T ss_pred             CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            5678999998643211         12223334449999999999999999999999999 8899999987778899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus        99 ~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~  133 (325)
T cd05602          99 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG  133 (325)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.87  E-value=2.9e-21  Score=128.32  Aligned_cols=104  Identities=20%  Similarity=0.245  Sum_probs=89.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+++..         ...|+.++..+ +|||++++++++..++.++++|||+ +|+|.+++.. ..++....
T Consensus        67 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~  144 (370)
T cd05596          67 SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWA  144 (370)
T ss_pred             CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHH
Confidence            67899999986432         12356666666 9999999999999999999999999 8999998855 46889999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       145 ~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~  180 (370)
T cd05596         145 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH  180 (370)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCC
Confidence            999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.87  E-value=3.7e-21  Score=125.83  Aligned_cols=105  Identities=19%  Similarity=0.273  Sum_probs=90.3

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~   70 (114)
                      +|+.||+|.++....         ..|..++... +|||++++++++...+..+++|||+ +++|.+++... ..+++..
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~  103 (330)
T cd05601          25 TGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDM  103 (330)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHH
Confidence            678999999875432         1345555555 9999999999999999999999999 89999999765 6799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|+|+++++||||||+||+++..+.
T Consensus       104 ~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~  140 (330)
T cd05601         104 AQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGH  140 (330)
T ss_pred             HHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCC
Confidence            9999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0197|consensus

Probab=99.87  E-value=1.3e-21  Score=130.73  Aligned_cols=103  Identities=19%  Similarity=0.192  Sum_probs=91.9

Q ss_pred             cEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHHHHHHHH
Q psy14425          4 IVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~~~~~~~   75 (114)
                      ..+|+|.++...     ..+|+.+++++ +|++|+++++++..+..+++||||+ .|+|.++++.  ...+..+....++
T Consensus       231 ~~vavk~ik~~~m~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a  309 (468)
T KOG0197|consen  231 TKVAVKTIKEGSMSPEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFA  309 (468)
T ss_pred             CcccceEEeccccChhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHH
Confidence            378999886533     33588899998 9999999999999988999999999 9999999986  4569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|+++||+||++++++||||.+.|||++++..
T Consensus       310 ~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~  341 (468)
T KOG0197|consen  310 AQIAEGMAYLESKNYIHRDLAARNILVDEDLV  341 (468)
T ss_pred             HHHHHHHHHHHhCCccchhhhhhheeeccCce
Confidence            99999999999999999999999999987764

>KOG0578|consensus

Probab=99.87  E-value=3.5e-22  Score=134.53  Aligned_cols=104  Identities=22%  Similarity=0.331  Sum_probs=91.7

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.||+|.+......      +|+.+++.. +|+||+.+++.|...+.+|.||||+ +|+|.+.+.. ..+++.++..+
T Consensus       297 ~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~I  374 (550)
T KOG0578|consen  297 TKQEVAIKRMDLRKQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAI  374 (550)
T ss_pred             CCceEEEEEEEeccCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc-ccccHHHHHHH
Confidence            5788999999655432      578888877 9999999999999999999999999 8999888854 55999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.+++.|+.|||.+||+|||||.+|||++.++.
T Consensus       375 cre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~  407 (550)
T KOG0578|consen  375 CREILQGLKFLHARGIIHRDIKSDNILLTMDGS  407 (550)
T ss_pred             HHHHHHHHHHHHhcceeeeccccceeEeccCCc
Confidence            999999999999999999999999999976554

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.7e-21  Score=126.06  Aligned_cols=104  Identities=22%  Similarity=0.300  Sum_probs=89.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~   70 (114)
                      +++.||+|.+.+..         ...|...+..+ +|+|+++++++|.+++.++++|||+ +++|.+++.. ...+++..
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  103 (331)
T cd05597          25 TGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDM  103 (331)
T ss_pred             CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHH
Confidence            57899999986421         12345555555 9999999999999999999999999 8999999875 45689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|+++++||||||+|||++.++
T Consensus       104 ~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~  139 (331)
T cd05597         104 ARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG  139 (331)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG1187|consensus

Probab=99.87  E-value=2.6e-21  Score=128.04  Aligned_cols=108  Identities=22%  Similarity=0.257  Sum_probs=91.5

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCC-EEEEEecCC-CCCHHHHHHhCC--CCCHHHHH
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDK-LAYLVFPPC-SGDLHSYVRQRK--RLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~   72 (114)
                      |+.||||.++...      ...|+..+.++ +|||+++++++|...+ ..++|+||+ .|+|.+.+....  .++|....
T Consensus        99 ~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~  177 (361)
T KOG1187|consen   99 GTVVAVKRLSSNSGQGEREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRL  177 (361)
T ss_pred             CCEEEEEEecCCCCcchhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHH
Confidence            4789999886543      33578888988 7999999999999888 599999999 899999986433  78999999


Q ss_pred             HHHHHHHHHHHHHHHC---CCccCCCCCCcEEEecC-Cccccc
Q psy14425         73 KLFRQIAETVRACHAQ---GIVLRDLKLRKFVFCNA-QRSVGH  111 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~---~i~h~~lk~~nil~~~~-~~~~~~  111 (114)
                      .|+.+++.|+.|||..   .++|||+||+|||++.+ ..+++|
T Consensus       178 kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  178 KIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             HHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            9999999999999985   39999999999999854 444543

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.87  E-value=4.1e-21  Score=125.51  Aligned_cols=105  Identities=22%  Similarity=0.281  Sum_probs=89.9

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.++..         ..|...+....+|++++++++++...+.++++|||+ +++|.+++...+.+++..+
T Consensus        24 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~  103 (323)
T cd05615          24 TDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQA  103 (323)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence            688999999865321         124555555646688889999999999999999999 8999999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       104 ~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~  138 (323)
T cd05615         104 VFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.87  E-value=6.1e-21  Score=124.64  Aligned_cols=105  Identities=22%  Similarity=0.261  Sum_probs=88.4

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+.++..         ..|...+..+..|++++.++++|...+.++++|||+ +++|.+.+...+.+++...
T Consensus        24 ~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~  103 (324)
T cd05587          24 TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHA  103 (324)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence            578899999865321         124455555634457888999999999999999999 8999999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+|||++.++
T Consensus       104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  138 (324)
T cd05587         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG  138 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG4721|consensus

Probab=99.87  E-value=7.9e-22  Score=134.15  Aligned_cols=105  Identities=16%  Similarity=0.238  Sum_probs=92.5

Q ss_pred             CcEEEEEEeccccchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHH
Q psy14425          3 GIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAET   81 (114)
Q Consensus         3 ~~~~avK~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (114)
                      ++.||||+++. ..+.+|+.|+++ +||||+.+.++|...-.+|++|||| .|.|...++....+....+..+..+|+.|
T Consensus       147 netVAVKKV~e-lkETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~G  224 (904)
T KOG4721|consen  147 NETVAVKKVRE-LKETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGG  224 (904)
T ss_pred             CceehhHHHhh-hhhhhHHHHHhc-cCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhh
Confidence            57889888752 233468888888 9999999999999999999999999 99999999988889999999999999999


Q ss_pred             HHHHHHCCCccCCCCCCcEEEecCC-ccc
Q psy14425         82 VRACHAQGIVLRDLKLRKFVFCNAQ-RSV  109 (114)
Q Consensus        82 l~~lh~~~i~h~~lk~~nil~~~~~-~~~  109 (114)
                      |.|||...|+|||||..|||++.++ .++
T Consensus       225 M~YLH~hKIIHRDLKSPNiLIs~~d~VKI  253 (904)
T KOG4721|consen  225 MNYLHLHKIIHRDLKSPNILISYDDVVKI  253 (904)
T ss_pred             hHHHHHhhHhhhccCCCceEeeccceEEe
Confidence            9999999999999999999996543 344

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.86  E-value=4.7e-21  Score=125.38  Aligned_cols=105  Identities=20%  Similarity=0.303  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+....        ...|+..+.++ +|||++++++++...     ..++++||+++++|.+.+.....+++
T Consensus        24 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~  102 (338)
T cd07859          24 TGEKVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTP  102 (338)
T ss_pred             CCCEEEEEEechhhccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcccCCH
Confidence            68899999885321        22467777777 999999999988643     35899999998899999887778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .....++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       103 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~  141 (338)
T cd07859         103 EHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK  141 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc
Confidence            999999999999999999999999999999999977653

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0604|consensus

Probab=99.86  E-value=1.6e-22  Score=128.46  Aligned_cols=105  Identities=26%  Similarity=0.402  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecc-ccchhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCCC--CCHHHHHH
Q psy14425          2 AGIVVVLEIMSR-EASGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRKR--LKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~-~~~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~~--~~~~~~~~   73 (114)
                      ||+++|+|++.. ....+|++...+...||||++++++|++    ...+.+|||.+ ||.|...+++++.  +++..+..
T Consensus        86 T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~e  165 (400)
T KOG0604|consen   86 TQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASE  165 (400)
T ss_pred             chhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHH
Confidence            667777777643 3344678877778899999999999874    46799999999 9999999987665  99999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++|+..|+.|||+.+|.|||+||+|+|++...
T Consensus       166 I~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~  198 (400)
T KOG0604|consen  166 IMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS  198 (400)
T ss_pred             HHHHHHHHHHHHHhcchhhccCChhheeeecCC
Confidence            999999999999999999999999999996544

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.86  E-value=6.3e-21  Score=122.29  Aligned_cols=104  Identities=19%  Similarity=0.162  Sum_probs=88.4

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~   67 (114)
                      +|+.+|+|.+.....         ..|+.++.++ +|+|++++.++|...+..+++|||+ +++|...+..    ...++
T Consensus        17 ~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~   95 (280)
T cd05608          17 TGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFP   95 (280)
T ss_pred             CCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCC
Confidence            678999999864321         2366667777 9999999999999999999999999 8899877632    34589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..+..++.|++.|+.|+|+++++|+||+|+||++++++
T Consensus        96 ~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~  134 (280)
T cd05608          96 EPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG  134 (280)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0591|consensus

Probab=99.86  E-value=4.4e-23  Score=130.06  Aligned_cols=109  Identities=22%  Similarity=0.405  Sum_probs=89.2

Q ss_pred             CCcEEEEEEeccc--------cchhHHHHHhhhCCCCCcceEEE-EEEcCCE-EEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSRE--------ASGNLLSAHYRLDSHPHINSLHE-VLLGDKL-AYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~-~~~~~~~-~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      +|..+|.|.+.-+        +.-+|+.+++++ +||||+++++ .|..++. ++++||+| .|+|.+.++.    ...+
T Consensus        43 ~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~i  121 (375)
T KOG0591|consen   43 DGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLI  121 (375)
T ss_pred             CcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccC
Confidence            5778888887422        122488889988 9999999988 5655555 99999999 9999999852    3459


Q ss_pred             CHHHHHHHHHHHHHHHHHHHH--CC--CccCCCCCCcEEEecCC-ccccc
Q psy14425         67 KEAEARKLFRQIAETVRACHA--QG--IVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~--~~--i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                      ++.++|.++.|++.|+.++|.  .+  ++||||||.||+++..+ .++||
T Consensus       122 pE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGD  171 (375)
T KOG0591|consen  122 PEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGD  171 (375)
T ss_pred             chHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeecc
Confidence            999999999999999999999  44  89999999999997655 45666

>KOG4717|consensus

Probab=99.86  E-value=3.4e-21  Score=130.03  Aligned_cols=105  Identities=30%  Similarity=0.480  Sum_probs=91.6

Q ss_pred             CCCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHH
Q psy14425          1 MAGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~   70 (114)
                      +||++||||++++....        +|+. .+++.+||||+++|++.-++..+|+++|.- +|+|.+++-+. ..+++..
T Consensus        41 FTGekVAVKviDKTKlD~~st~hlfqEVR-CMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~L  119 (864)
T KOG4717|consen   41 FTGEKVAVKVIDKTKLDTLSTGHLFQEVR-CMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDL  119 (864)
T ss_pred             cccceeEEEEecccccchhhhhHHHHHHH-HHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHH
Confidence            69999999999765433        2443 455669999999999999999999999998 88999999654 5699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+.++.|++.|+.|+|+..++||||||+|+++.+..
T Consensus       120 a~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl  155 (864)
T KOG4717|consen  120 AKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL  155 (864)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec
Confidence            999999999999999999999999999999997643

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.86  E-value=4.4e-21  Score=120.44  Aligned_cols=105  Identities=17%  Similarity=0.287  Sum_probs=90.2

Q ss_pred             CCcEEEEEEeccccc-hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIA   79 (114)
Q Consensus         2 t~~~~avK~~~~~~~-~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (114)
                      ||+.||+|.+..... ..+...+... .|||++++++++...+..+++||++ +++|.+++.+...+++.....++.|++
T Consensus        17 ~~~~~~~K~i~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~   95 (237)
T cd05576          17 TQQTFILKGLRKSSEYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMV   95 (237)
T ss_pred             CCcEEEEEeecchhhhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            688999999976542 2333333444 7999999999999999999999999 889999987767799999999999999


Q ss_pred             HHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         80 ETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        80 ~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|+.|+|+++++|+|+||+||+++.++.
T Consensus        96 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~  123 (237)
T cd05576          96 VALDALHREGIVCRDLNPNNILLDDRGH  123 (237)
T ss_pred             HHHHHHHhCCeeccCCCHHHEEEcCCCC
Confidence            9999999999999999999999977653

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=8.5e-21  Score=126.90  Aligned_cols=105  Identities=21%  Similarity=0.306  Sum_probs=92.7

Q ss_pred             CCcEEEEEEecccc-chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAE   80 (114)
Q Consensus         2 t~~~~avK~~~~~~-~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (114)
                      +++.+|+|.+.... ..+|+.++.++ +||||+++++.|...+..+++||++.+++.+++.....+++..+..++.|++.
T Consensus       118 ~~~~v~vK~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~  196 (392)
T PHA03207        118 QRKKVIVKAVTGGKTPGREIDILKTI-SHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLE  196 (392)
T ss_pred             cceeEEEEeccccccHHHHHHHHHhc-CCCCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence            35678999886543 35788888888 99999999999999999999999998899998876678999999999999999


Q ss_pred             HHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         81 TVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        81 ~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      |+.|||++|++||||||+|||++..+.
T Consensus       197 aL~~LH~~givHrDlkp~Nill~~~~~  223 (392)
T PHA03207        197 ALAYLHGRGIIHRDVKTENIFLDEPEN  223 (392)
T ss_pred             HHHHHHHCCccccCCCHHHEEEcCCCC
Confidence            999999999999999999999976543

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=1.1e-20  Score=129.10  Aligned_cols=103  Identities=21%  Similarity=0.232  Sum_probs=88.0

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCCHHHH
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLKEAEA   71 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~~~~~   71 (114)
                      ++.+|+|.+....      ...|+..+.++ +||||++++++|..++.++++|||+ +++|.+.+..    ...+++...
T Consensus        93 ~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~  171 (478)
T PTZ00267         93 KEKVVAKFVMLNDERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEV  171 (478)
T ss_pred             CeEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHH
Confidence            6778888774433      22367777777 9999999999999999999999999 8999987743    345889999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+||+++..+
T Consensus       172 ~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~  206 (478)
T PTZ00267        172 GLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG  206 (478)
T ss_pred             HHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC
Confidence            99999999999999999999999999999997655

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.86  E-value=1.1e-20  Score=123.93  Aligned_cols=104  Identities=19%  Similarity=0.244  Sum_probs=88.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~   70 (114)
                      +++.||+|.+.+..         ...|...+... +|++++++++++...+..+++|||+ +|+|.+++.. ...+++..
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~  103 (331)
T cd05624          25 TERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDM  103 (331)
T ss_pred             CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHH
Confidence            57889999986422         11244455555 9999999999999999999999999 8999999976 46789999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus       104 ~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~  139 (331)
T cd05624         104 ARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG  139 (331)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.86  E-value=1.1e-20  Score=123.33  Aligned_cols=105  Identities=23%  Similarity=0.275  Sum_probs=89.7

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+.+...         ..|...+.....|++++.+++++...+.++++|||+ +++|.+.+...+.+++..+
T Consensus        24 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~  103 (323)
T cd05616          24 TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHA  103 (323)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHH
Confidence            578999999865421         123444555557899999999999999999999999 8999999887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+|||++.++
T Consensus       104 ~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~  138 (323)
T cd05616         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             HHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC
Confidence            99999999999999999999999999999997765

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0667|consensus

Probab=99.86  E-value=4.6e-21  Score=130.77  Aligned_cols=108  Identities=21%  Similarity=0.273  Sum_probs=93.3

Q ss_pred             CCCcEEEEEEecccc-----chhHHHHHhhhCCC-----CCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC--CCCCH
Q psy14425          1 MAGIVVVLEIMSREA-----SGNLLSAHYRLDSH-----PHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKE   68 (114)
Q Consensus         1 ~t~~~~avK~~~~~~-----~~~e~~~~~~~~~h-----~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~--~~~~~   68 (114)
                      .|++.||||+++...     ...|+.+|..+.+|     -|+++++++|...+++|+|+|.+..+|+++++.+  .+++.
T Consensus       209 ~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl  288 (586)
T KOG0667|consen  209 KTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSL  288 (586)
T ss_pred             CCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCH
Confidence            489999999997542     23477777766423     3999999999999999999999999999999764  45999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      ..++.+..|++.|+.+||+.+++|.||||+|||+.+.+++
T Consensus       289 ~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~  328 (586)
T KOG0667|consen  289 PLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS  328 (586)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC
Confidence            9999999999999999999999999999999999877665

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.86  E-value=1.4e-20  Score=119.87  Aligned_cols=104  Identities=16%  Similarity=0.199  Sum_probs=89.0

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +..+|+|.++....       .+|+..+.++ +|||++++++++..++..+++|||+ +++|.+++... ..+++..+..
T Consensus        33 ~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~  111 (266)
T cd05064          33 ELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMG  111 (266)
T ss_pred             eeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHH
Confidence            56889998865432       2356666666 9999999999999999999999999 88999988763 4689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|+++++|+|++|+||+++.++.
T Consensus       112 ~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~  145 (266)
T cd05064         112 MLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLV  145 (266)
T ss_pred             HHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCc
Confidence            9999999999999999999999999999977553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.86  E-value=1.2e-20  Score=125.38  Aligned_cols=103  Identities=18%  Similarity=0.230  Sum_probs=87.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      |++.+|+|.+....         ..+|..++..+ +|||++++++.+..++.++++|||+ +++|.+++.. ..++....
T Consensus        67 ~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~  144 (371)
T cd05622          67 TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWA  144 (371)
T ss_pred             CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHH
Confidence            67899999986422         11345555555 9999999999999999999999999 8899998865 45889999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus       145 ~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~  179 (371)
T cd05622         145 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG  179 (371)
T ss_pred             HHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.86  E-value=8.2e-21  Score=124.05  Aligned_cols=104  Identities=17%  Similarity=0.214  Sum_probs=85.9

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHh--hhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHY--RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~--~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.||+|.++.....         .|...+.  +..+|||++++++++..++..+++|||+ +++|...+.. ..+++.
T Consensus        23 ~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~  101 (324)
T cd05589          23 TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEP  101 (324)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHH
Confidence            6889999999654211         1222221  2238999999999999999999999999 8899887754 569999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       102 ~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~  138 (324)
T cd05589         102 RAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG  138 (324)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC
Confidence            9999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.86  E-value=1.4e-20  Score=120.99  Aligned_cols=104  Identities=16%  Similarity=0.154  Sum_probs=88.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~   69 (114)
                      +|+.||+|.+....         ..+|+.++.++ +|++++++++++..++..++++|++ +++|...+..  ...+++.
T Consensus        24 ~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~  102 (285)
T cd05631          24 TGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQ  102 (285)
T ss_pred             CCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHH
Confidence            68899999986432         12366677777 9999999999999999999999999 8899887753  2358999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|+++++||||||+||++++++
T Consensus       103 ~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~  139 (285)
T cd05631         103 RAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG  139 (285)
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC
Confidence            9999999999999999999999999999999997644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=1.1e-20  Score=125.03  Aligned_cols=104  Identities=25%  Similarity=0.342  Sum_probs=92.6

Q ss_pred             CCcEEEEEEeccccchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLFRQIAE   80 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~   80 (114)
                      +++.||+|.........|..++.++ +|||++++++++...+..++++|++.+++.+++.. ...+++..+..++.|++.
T Consensus        90 ~~~~valK~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~  168 (357)
T PHA03209         90 QPDPVVLKIGQKGTTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILE  168 (357)
T ss_pred             CCceEEEEeCCccccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence            4678999987777677788888888 99999999999999999999999998888888864 356899999999999999


Q ss_pred             HHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         81 TVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        81 ~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |+.|+|.++++||||||+||+++..+
T Consensus       169 aL~~LH~~~ivHrDlkp~Nill~~~~  194 (357)
T PHA03209        169 GLRYLHAQRIIHRDVKTENIFINDVD  194 (357)
T ss_pred             HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999997654

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.85  E-value=2.3e-20  Score=119.54  Aligned_cols=104  Identities=17%  Similarity=0.171  Sum_probs=88.7

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      +|+.||+|.+.....         ..|.+++.++ +|||++++++++..+..++++|||+ +++|.+.+...  ..++..
T Consensus        17 ~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~   95 (277)
T cd05607          17 TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEME   95 (277)
T ss_pred             CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHH
Confidence            588999999864321         1266777777 9999999999999999999999999 88998887543  348888


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|++|++|+||+|+||++++++
T Consensus        96 ~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~  132 (277)
T cd05607          96 RVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG  132 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC
Confidence            8899999999999999999999999999999997655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.85  E-value=3e-20  Score=120.29  Aligned_cols=103  Identities=19%  Similarity=0.255  Sum_probs=86.7

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      +..||+|.+....       ..+|+..+.++ +||||+++++++...+..+++|||+ +++|.+++....          
T Consensus        46 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  124 (304)
T cd05096          46 PLLVAVKILRPDANKNARNDFLKEVKILSRL-KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGND  124 (304)
T ss_pred             ceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccc
Confidence            3479999986542       22467777777 9999999999999999999999999 889999885421          


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ---------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ---------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                               .+++.....++.|++.|+.|+|+.|++|+||||+||+++.++
T Consensus       125 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~  175 (304)
T cd05096         125 AVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENL  175 (304)
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCc
Confidence                     256778889999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.85  E-value=1.7e-20  Score=132.48  Aligned_cols=104  Identities=22%  Similarity=0.256  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+....         ...|...+..+ +||||+++++++...+.++++|||+ +++|.+++...+.++...+
T Consensus        28 ~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~  106 (669)
T cd05610          28 NSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMA  106 (669)
T ss_pred             CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHH
Confidence            57899999986532         22345555555 9999999999999999999999999 8999999987777899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.++.|++.|+.|||.++++||||||+|||++.++
T Consensus       107 ~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g  141 (669)
T cd05610         107 VKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG  141 (669)
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2e-20  Score=120.27  Aligned_cols=105  Identities=18%  Similarity=0.167  Sum_probs=89.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      +++.||+|.+....         ..+|+..+.++ +|||++++++.+.+++..+++|||+ +++|.+.+...  ..+++.
T Consensus        24 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  102 (285)
T cd05605          24 TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEE  102 (285)
T ss_pred             CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHH
Confidence            57899999986432         12367777777 9999999999999999999999999 88998887543  458999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|+|+++++|+||+|+||++++++.
T Consensus       103 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  140 (285)
T cd05605         103 RAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH  140 (285)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC
Confidence            99999999999999999999999999999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.85  E-value=3.1e-20  Score=121.84  Aligned_cols=104  Identities=14%  Similarity=0.189  Sum_probs=91.2

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+....       ..+|+..+.++ +||||++++++|..++.++++|||+ +++|.+++...+.++...+..
T Consensus        29 ~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  107 (333)
T cd06650          29 SGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK  107 (333)
T ss_pred             CCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHH
Confidence            57889999886542       22467777777 9999999999999999999999999 889999998777899999999


Q ss_pred             HHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++ +++|+||||+||+++.++
T Consensus       108 ~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~  141 (333)
T cd06650         108 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG  141 (333)
T ss_pred             HHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC
Confidence            999999999999985 799999999999997655

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.85  E-value=2.2e-20  Score=121.22  Aligned_cols=104  Identities=15%  Similarity=0.301  Sum_probs=90.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.||+|.+....        ..+|+..+.++ +|+|+++++++|...+..+++||++ ++++.+++...  ..++...
T Consensus        24 ~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~  102 (314)
T cd08216          24 TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELA  102 (314)
T ss_pred             CCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHH
Confidence            68999999986541        22467777777 9999999999999999999999999 78999988653  4588999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|||+++++|+|++|+||+++.++
T Consensus       103 ~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~  138 (314)
T cd08216         103 IAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG  138 (314)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC
Confidence            999999999999999999999999999999997644

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=2e-20  Score=127.35  Aligned_cols=104  Identities=27%  Similarity=0.343  Sum_probs=92.3

Q ss_pred             CCcEEEEEEeccccchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARKLFRQIAE   80 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~   80 (114)
                      +++.||+|........+|+.++.++ +|+||+++++++..++..++++|++.++|..++... ..+++..+..++.|++.
T Consensus       193 ~~~~vavK~~~~~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~  271 (461)
T PHA03211        193 YPQRVVVKAGWYASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLS  271 (461)
T ss_pred             CCCEEEEecccccCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            4678999977666667889888888 999999999999999999999999988888888653 46999999999999999


Q ss_pred             HHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         81 TVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        81 ~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |+.|+|++|++||||||+|||++..+
T Consensus       272 aL~yLH~~gIvHrDLKP~NILl~~~~  297 (461)
T PHA03211        272 AIDYIHGEGIIHRDIKTENVLVNGPE  297 (461)
T ss_pred             HHHHHHHCCEEECcCCHHHEEECCCC
Confidence            99999999999999999999997654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.85  E-value=1.8e-20  Score=119.05  Aligned_cols=104  Identities=18%  Similarity=0.210  Sum_probs=91.4

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.+|+|.+....            ...|+..+.++ +|+|++++++++...+.+++++|++ +++|.+++...+.+++
T Consensus        24 ~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~  102 (268)
T cd06630          24 TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE  102 (268)
T ss_pred             CCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCH
Confidence            68899999986432            12366677777 9999999999999999999999999 8899999987778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .....++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       103 ~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~  140 (268)
T cd06630         103 AVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG  140 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            99999999999999999999999999999999997654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.85  E-value=5.2e-20  Score=120.61  Aligned_cols=105  Identities=15%  Similarity=0.199  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|..+|+|.+....       ..+|+..+.++ +|||++++++++..++..+++|||+ +++|.+++.....++...+..
T Consensus        29 ~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  107 (331)
T cd06649          29 SGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK  107 (331)
T ss_pred             CCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHH
Confidence            57889999986542       22467777777 9999999999999999999999999 889999998777899999999


Q ss_pred             HHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|++ +++|+||||+||+++.++.
T Consensus       108 ~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~  142 (331)
T cd06649         108 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE  142 (331)
T ss_pred             HHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc
Confidence            999999999999986 5999999999999976653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA02988 hypothetical protein; Provisional

Probab=99.85  E-value=3.1e-20  Score=119.43  Aligned_cols=104  Identities=12%  Similarity=0.130  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.++...         ..+|+..+.++ +||||+++++++.+    ...++++|||+ +|+|.+++...+.++
T Consensus        42 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~  120 (283)
T PHA02988         42 NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLS  120 (283)
T ss_pred             CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCC
Confidence            57899999986432         12577788888 99999999999876    45789999999 899999998777899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      +.....++.+++.|+.|+|.. +++|||++|+|+++++++
T Consensus       121 ~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~  160 (283)
T PHA02988        121 FKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY  160 (283)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC
Confidence            999999999999999999984 899999999999997654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.85  E-value=1.7e-20  Score=123.01  Aligned_cols=104  Identities=15%  Similarity=0.210  Sum_probs=84.6

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcC-CEEEEEecCC-CCCHHHHHHhC----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGD-KLAYLVFPPC-SGDLHSYVRQR----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~v~e~~-~~~l~~~~~~~----------   63 (114)
                      ++.||+|.+....       ..+|+..+..+.+||||+++++++... +.++++|||+ +|+|.+++...          
T Consensus        37 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~  116 (338)
T cd05102          37 CNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREK  116 (338)
T ss_pred             chhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhccccccc
Confidence            4679999986432       224677777777899999999988754 4689999999 89999888642          


Q ss_pred             ----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy14425         64 ----------------------------------------------------KRLKEAEARKLFRQIAETVRACHAQGIV   91 (114)
Q Consensus        64 ----------------------------------------------------~~~~~~~~~~~~~~~~~~l~~lh~~~i~   91 (114)
                                                                          ..++......++.|++.|+.|+|+++++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv  196 (338)
T cd05102         117 SPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCI  196 (338)
T ss_pred             chhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence                                                                1266777888999999999999999999


Q ss_pred             cCCCCCCcEEEecCC
Q psy14425         92 LRDLKLRKFVFCNAQ  106 (114)
Q Consensus        92 h~~lk~~nil~~~~~  106 (114)
                      ||||||+||+++.++
T Consensus       197 HrDiKp~Nil~~~~~  211 (338)
T cd05102         197 HRDLAARNILLSENN  211 (338)
T ss_pred             CCCCccceEEEcCCC
Confidence            999999999997654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.85  E-value=3.2e-20  Score=121.43  Aligned_cols=104  Identities=17%  Similarity=0.261  Sum_probs=87.6

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.||+|.......        ..|+.++..+ +||||++++++|..++..++++|++ ++++.+++...  ..+++..
T Consensus        24 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~  102 (328)
T cd08226          24 TGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEAL  102 (328)
T ss_pred             CCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHH
Confidence            689999999864321        1234444444 9999999999999999999999999 88999988653  3489999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|+++++|||+||+||+++.++
T Consensus       103 ~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~  138 (328)
T cd08226         103 IGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG  138 (328)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC
Confidence            999999999999999999999999999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0694|consensus

Probab=99.85  E-value=3e-21  Score=132.51  Aligned_cols=106  Identities=17%  Similarity=0.256  Sum_probs=90.0

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      |++.||||.++++..-         .|-.++.-..+||+++.++.+|++.+++++||||+ ||++..++ ..+.+++..+
T Consensus       392 ~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~-~~~~F~e~ra  470 (694)
T KOG0694|consen  392 TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHI-HTDVFSEPRA  470 (694)
T ss_pred             CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEE-ecccccHHHH
Confidence            6889999999876422         13444444558999999999999999999999999 88844443 4477999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      ..|+..++.|+.|||++||++||||.+|||++..|..
T Consensus       471 rfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~  507 (694)
T KOG0694|consen  471 RFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHV  507 (694)
T ss_pred             HHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcE
Confidence            9999999999999999999999999999999988865

>KOG0589|consensus

Probab=99.85  E-value=4.6e-21  Score=127.43  Aligned_cols=109  Identities=24%  Similarity=0.339  Sum_probs=92.8

Q ss_pred             CcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCE-EEEEecCC-CCCHHHHHHhCC--CCCHHH
Q psy14425          3 GIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKL-AYLVFPPC-SGDLHSYVRQRK--RLKEAE   70 (114)
Q Consensus         3 ~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~-~~~v~e~~-~~~l~~~~~~~~--~~~~~~   70 (114)
                      +..|++|.+..+.        ..+|...+.++ .||||+.+.+.|+.++. ++++|+|+ ||++.+.+.+..  .+++..
T Consensus        29 ~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~  107 (426)
T KOG0589|consen   29 DKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEER  107 (426)
T ss_pred             CceEEEEEEeccccCchhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHH
Confidence            5679999986443        23577778886 99999999999998877 99999999 999999997543  599999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccccc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGHE  112 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~~  112 (114)
                      +..++-|++.|+.|||+++|+|||+|+.||+++.++ ..+||.
T Consensus       108 i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDf  150 (426)
T KOG0589|consen  108 ILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDF  150 (426)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecch
Confidence            999999999999999999999999999999995544 456653

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.85  E-value=5.2e-20  Score=116.15  Aligned_cols=104  Identities=20%  Similarity=0.248  Sum_probs=89.5

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +|+.+|+|.+....       ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++... ..+++..+.
T Consensus        19 ~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~   97 (252)
T cd05084          19 DNTPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELI   97 (252)
T ss_pred             CCceEEEEecCccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHH
Confidence            57889999875432       22466667777 9999999999999999999999999 88999998654 358999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        98 ~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~  131 (252)
T cd05084          98 QMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN  131 (252)
T ss_pred             HHHHHHHHHHHHHHhCCccccccchheEEEcCCC
Confidence            9999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.85  E-value=2.9e-20  Score=121.85  Aligned_cols=104  Identities=21%  Similarity=0.261  Sum_probs=88.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~   70 (114)
                      +++.+|+|.+.+..         ...|...+... +|++++++++++.+.+.++++|||+ +|+|.+++.. ...+++..
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~  103 (332)
T cd05623          25 ADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDM  103 (332)
T ss_pred             CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHH
Confidence            56789999985422         12244455555 9999999999999999999999999 8999999976 45689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus       104 ~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~  139 (332)
T cd05623         104 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG  139 (332)
T ss_pred             HHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=3.8e-20  Score=118.44  Aligned_cols=102  Identities=18%  Similarity=0.230  Sum_probs=85.1

Q ss_pred             cEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          4 IVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      ..+|+|.+......      ++...+..+ +|||++++++++...+..++||||+ +++|..++.. .+.++......++
T Consensus        45 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~  123 (274)
T cd05076          45 LRVVLKVLDPSHRDIALAFFETASLMSQV-SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVA  123 (274)
T ss_pred             eeEEEEecChHHHHHHHHHHHHHHHHhcC-CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            45888888643221      234445555 9999999999999999999999999 8899888865 4568999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++||||||+||+++..+
T Consensus       124 ~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~  154 (274)
T cd05076         124 QQLASALSYLEDKNLVHGNVCAKNILLARLG  154 (274)
T ss_pred             HHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence            9999999999999999999999999997543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG4250|consensus

Probab=99.85  E-value=2.1e-21  Score=133.74  Aligned_cols=105  Identities=26%  Similarity=0.371  Sum_probs=90.4

Q ss_pred             CCCcEEEEEEeccc-------cchhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCC-CCCHHHHHHh---C
Q psy14425          1 MAGIVVVLEIMSRE-------ASGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPC-SGDLHSYVRQ---R   63 (114)
Q Consensus         1 ~t~~~~avK~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~-~~~l~~~~~~---~   63 (114)
                      .||+.+|||.++..       .+-.|+++++++ +||||++++++-++..      ...++|||| +|+|...+.+   .
T Consensus        36 etG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~  114 (732)
T KOG4250|consen   36 ETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENA  114 (732)
T ss_pred             ccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccc
Confidence            48999999998653       233589999999 7999999999976443      578999999 9999999964   2


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++++..+..++..+..|+.|||.+||+||||||.||++..+.
T Consensus       115 ~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge  157 (732)
T KOG4250|consen  115 YGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE  157 (732)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence            4699999999999999999999999999999999999995544

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=1.5e-20  Score=120.58  Aligned_cols=104  Identities=19%  Similarity=0.268  Sum_probs=86.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.+|+|.+....        ..+|+..+.++ +|||++++++++...+..+++|||+ ++.+..+......++...+.
T Consensus        25 ~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  103 (287)
T cd07848          25 TKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVR  103 (287)
T ss_pred             CCcEEEEEEEecccccccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHH
Confidence            57889999986432        22467777777 9999999999999999999999999 54444443334568999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+.+++|+||||+||+++.++
T Consensus       104 ~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~  137 (287)
T cd07848         104 SYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND  137 (287)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.85  E-value=4.5e-20  Score=119.76  Aligned_cols=104  Identities=24%  Similarity=0.334  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +++.+|+|.++...       ..+|+..+.++ +|||++++++++..++..+++|||+.+++.+.+... ..++...+..
T Consensus        30 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  108 (309)
T cd07872          30 TENLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKI  108 (309)
T ss_pred             CCCeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHH
Confidence            57889999986432       22467777777 999999999999999999999999977898888654 3488999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++||||+|+||+++..+
T Consensus       109 ~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~  141 (309)
T cd07872         109 FLYQILRGLAYCHRRKVLHRDLKPQNLLINERG  141 (309)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.85  E-value=2.7e-20  Score=123.87  Aligned_cols=105  Identities=19%  Similarity=0.288  Sum_probs=87.7

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      ++..||+|.++...       ..+|+.++..+.+||||+++++++...+..+++|||+ +|+|.+++....         
T Consensus        64 ~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~  143 (375)
T cd05104          64 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHE  143 (375)
T ss_pred             cceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhccccccccccc
Confidence            35689999986432       2246777777768999999999999999999999999 899998885421         


Q ss_pred             ------------------------------------------------------------------CCCHHHHHHHHHHH
Q psy14425         65 ------------------------------------------------------------------RLKEAEARKLFRQI   78 (114)
Q Consensus        65 ------------------------------------------------------------------~~~~~~~~~~~~~~   78 (114)
                                                                                        .+++.....++.|+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  223 (375)
T cd05104         144 DHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQV  223 (375)
T ss_pred             chhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHH
Confidence                                                                              35677788999999


Q ss_pred             HHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         79 AETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        79 ~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|+.|+|+++++||||||+||+++.++
T Consensus       224 ~~~l~~lH~~~ivH~Dlkp~Nill~~~~  251 (375)
T cd05104         224 AKGMSFLASKNCIHRDLAARNILLTHGR  251 (375)
T ss_pred             HHHHHHHHHCCeeccCCchhhEEEECCC
Confidence            9999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.85  E-value=3.5e-20  Score=119.25  Aligned_cols=104  Identities=27%  Similarity=0.331  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+....         ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+++...+.++....
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~  103 (290)
T cd05580          25 SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVA  103 (290)
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHH
Confidence            57899999986432         22366777777 8999999999999999999999999 8999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       104 ~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~  138 (290)
T cd05580         104 RFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG  138 (290)
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997665

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0194|consensus

Probab=99.85  E-value=1.3e-20  Score=127.13  Aligned_cols=105  Identities=18%  Similarity=0.326  Sum_probs=90.8

Q ss_pred             EEEEEecccc-c-h-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHH
Q psy14425          6 VVLEIMSREA-S-G-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKL   74 (114)
Q Consensus         6 ~avK~~~~~~-~-~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~   74 (114)
                      ||+|....+. . .       .|.+.++++ +||||+++|++......++++||+| +|+|.+++++.+ .++...-..+
T Consensus       189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~  267 (474)
T KOG0194|consen  189 VAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRF  267 (474)
T ss_pred             eEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHH
Confidence            8999887522 1 1       255566665 9999999999999999999999999 999999998876 4999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-cccc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVGH  111 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~~  111 (114)
                      +.+.+.|++|||+++++||||..+|+|++.++. +++|
T Consensus       268 ~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISD  305 (474)
T KOG0194|consen  268 CYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISD  305 (474)
T ss_pred             HHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCc
Confidence            999999999999999999999999999988665 5543

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.85  E-value=6.9e-20  Score=116.44  Aligned_cols=104  Identities=15%  Similarity=0.257  Sum_probs=91.3

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.||+|.++....      .+|+..+..+ +|||++++++.+...+..++++|++ +++|.+++...+.++......+
T Consensus        33 ~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  111 (267)
T cd06645          33 TGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYV  111 (267)
T ss_pred             CCcEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHH
Confidence            578999999865432      2356666666 9999999999999999999999999 7899999987788999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|.+|++|+|++|+||+++..+
T Consensus       112 ~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~  143 (267)
T cd06645         112 SRETLQGLYYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.85  E-value=1.9e-20  Score=124.35  Aligned_cols=104  Identities=21%  Similarity=0.246  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC-----EEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK-----LAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-----~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+....        ..+|+.++..+ +|+|++++++++...+     ..++++|++.+++.+.+.....++.
T Consensus        24 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~  102 (372)
T cd07853          24 DGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSS  102 (372)
T ss_pred             CCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceEEEEeeccccCHHHHHhcCCCCCH
Confidence            68899999885431        22466677777 9999999999998776     7999999998889988877778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       103 ~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~  140 (372)
T cd07853         103 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC  140 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC
Confidence            99999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.85  E-value=2.9e-20  Score=123.72  Aligned_cols=104  Identities=17%  Similarity=0.257  Sum_probs=87.1

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      ++.||+|.+....       ...|+..+..+.+|+||+++++.+...+.++++|||+ +|+|.+++...           
T Consensus        68 ~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~  147 (374)
T cd05106          68 VLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMAL  147 (374)
T ss_pred             cceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccc
Confidence            3579999986542       2246677776668999999999999999999999999 89999887432           


Q ss_pred             -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Q psy14425         64 -----------------------------------------------------------KRLKEAEARKLFRQIAETVRA   84 (114)
Q Consensus        64 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~l~~   84 (114)
                                                                                 ..++...+..++.|++.|+.|
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~y  227 (374)
T cd05106         148 PEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDF  227 (374)
T ss_pred             cccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHH
Confidence                                                                       136777889999999999999


Q ss_pred             HHHCCCccCCCCCCcEEEecCC
Q psy14425         85 CHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        85 lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ||++|++||||||+||++++++
T Consensus       228 LH~~giiHrDLkp~Nil~~~~~  249 (374)
T cd05106         228 LASKNCIHRDVAARNVLLTDGR  249 (374)
T ss_pred             HHHCCEEeccCchheEEEeCCC
Confidence            9999999999999999997654

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.85  E-value=3.8e-20  Score=119.29  Aligned_cols=104  Identities=20%  Similarity=0.274  Sum_probs=90.8

Q ss_pred             CCcEEEEEEeccccch-----------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC-CCCHH
Q psy14425          2 AGIVVVLEIMSREASG-----------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-----------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~-~~~~~   69 (114)
                      +|+.||+|.+......           .|+..+.++ +|+|++++++++.+.+..+++||+++++|.+++.... .+++.
T Consensus        24 ~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~  102 (298)
T cd07841          24 TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPA  102 (298)
T ss_pred             CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHH
Confidence            5789999998654322           356666767 8999999999999999999999999889999987655 69999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       103 ~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~  139 (298)
T cd07841         103 DIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG  139 (298)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC
Confidence            9999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.84  E-value=4.7e-20  Score=125.00  Aligned_cols=104  Identities=16%  Similarity=0.182  Sum_probs=86.1

Q ss_pred             CCcEEEEEEecccc--chhHHHHHhhhCCCCCcceEEEEEEcC--------CEEEEEecCCCCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSREA--SGNLLSAHYRLDSHPHINSLHEVLLGD--------KLAYLVFPPCSGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--~~~e~~~~~~~~~h~~i~~~~~~~~~~--------~~~~~v~e~~~~~l~~~~~~----~~~~~   67 (114)
                      +++.||+|.+..+.  ...|+.++..+ +|||+++++++|...        ..++++|||+++++.+++..    ...++
T Consensus        90 ~~~~vAiK~i~~~~~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~  168 (440)
T PTZ00036         90 TSEKVAIKKVLQDPQYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALP  168 (440)
T ss_pred             CCCEEEEEEEecCcchHHHHHHHHHhc-CCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCC
Confidence            67899999885443  33578888877 999999998887532        35789999998888777642    35689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||+++++||||||+||+++..+
T Consensus       169 ~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~  207 (440)
T PTZ00036        169 LFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT  207 (440)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC
Confidence            999999999999999999999999999999999997654

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=5.9e-20  Score=116.37  Aligned_cols=104  Identities=22%  Similarity=0.212  Sum_probs=90.7

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.+|+|.+....           ...|+..+.++ +|||++++++++..++..++++|++ +++|.+.+...+.++..
T Consensus        26 ~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~  104 (263)
T cd06625          26 TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTET  104 (263)
T ss_pred             CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHH
Confidence            57899999875332           22356667777 9999999999999999999999999 88999998877778999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       105 ~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~  141 (263)
T cd06625         105 VTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG  141 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999999997654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.84  E-value=9.1e-20  Score=116.31  Aligned_cols=105  Identities=23%  Similarity=0.335  Sum_probs=89.6

Q ss_pred             CCcEEEEEEeccccch-hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG-NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIA   79 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (114)
                      +|+.+|+|.+...... .+........+|||+++++++|...+.++++|||+ +++|.+++.....+++..+..++.|++
T Consensus        40 ~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~  119 (267)
T PHA03390         40 TQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLV  119 (267)
T ss_pred             CCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence            5788999998754322 23333322337999999999999999999999999 899999998777899999999999999


Q ss_pred             HHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         80 ETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        80 ~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|+.|+|+.+++|+|++|+||+++.++
T Consensus       120 ~~l~~lH~~~i~H~dl~p~nil~~~~~  146 (267)
T PHA03390        120 EALNDLHKHNIIHNDIKLENVLYDRAK  146 (267)
T ss_pred             HHHHHHHhCCeeeCCCCHHHEEEeCCC
Confidence            999999999999999999999998766

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.84  E-value=1.2e-19  Score=115.35  Aligned_cols=104  Identities=16%  Similarity=0.247  Sum_probs=90.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.+|+|.+....      ..+|+..+.++ +|||++++++++...+.++++||++ +++|.+++...+.++......+
T Consensus        33 ~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~  111 (267)
T cd06646          33 TGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYV  111 (267)
T ss_pred             CCeEEEEEEEecCccchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHH
Confidence            57889999986432      22467777776 9999999999999999999999999 7899998877777999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|+.+++|+|++|+||+++..+
T Consensus       112 ~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~  143 (267)
T cd06646         112 CRETLQGLAYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.84  E-value=8.1e-20  Score=118.11  Aligned_cols=104  Identities=22%  Similarity=0.338  Sum_probs=90.1

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      |++.||+|.+....       ..+|+..+.++ +||||+++++++..++..++++|++.+++.+++... ..++...+..
T Consensus        30 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~  108 (301)
T cd07873          30 TDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKL  108 (301)
T ss_pred             CCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHH
Confidence            57889999986432       22467777777 999999999999999999999999988998888653 4588999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+||+|+||++++++
T Consensus       109 ~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~  141 (301)
T cd07873         109 FLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG  141 (301)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.84  E-value=6.2e-20  Score=117.98  Aligned_cols=106  Identities=21%  Similarity=0.358  Sum_probs=92.2

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|+.||+|.+....          ...|+..+.++.+|+|++.++++|..++..++++|++ +++|.+++.....++...
T Consensus        27 ~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  106 (290)
T cd05613          27 SGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQE  106 (290)
T ss_pred             CCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHH
Confidence            57889999986422          2236777777767999999999999999999999999 889999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|+|+++++|+||+|+||+++.++.
T Consensus       107 ~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~  143 (290)
T cd05613         107 VQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGH  143 (290)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCC
Confidence            9999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.84  E-value=1.5e-19  Score=117.36  Aligned_cols=104  Identities=14%  Similarity=0.187  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      ||..+|+|.+....       ...|++.+.++ +|||+++++++|..++.+++++||+ +++|.+++...+.++......
T Consensus        25 ~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~  103 (308)
T cd06615          25 SGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGK  103 (308)
T ss_pred             CCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHH
Confidence            57888999886442       22467777777 9999999999999999999999999 889999998778899999999


Q ss_pred             HHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+ .+++|+|++|+||++++++
T Consensus       104 ~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~  137 (308)
T cd06615         104 ISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG  137 (308)
T ss_pred             HHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC
Confidence            99999999999998 5899999999999997654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.84  E-value=1.1e-19  Score=116.78  Aligned_cols=104  Identities=25%  Similarity=0.351  Sum_probs=90.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+.++ +|+|++++++++...+..+++|||++++|.+++... ..++...+..
T Consensus        29 ~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~  107 (291)
T cd07844          29 TGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRL  107 (291)
T ss_pred             CCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHH
Confidence            57899999985432       22477778877 999999999999999999999999977999988654 4589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+||+|+||+++..+
T Consensus       108 ~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~  140 (291)
T cd07844         108 FLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG  140 (291)
T ss_pred             HHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC
Confidence            999999999999999999999999999997655

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0033|consensus

Probab=99.84  E-value=9.6e-22  Score=122.27  Aligned_cols=103  Identities=29%  Similarity=0.499  Sum_probs=87.2

Q ss_pred             CCcEEEEEEeccc-----c---chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSRE-----A---SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~-----~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+.+|+|+++..     +   .++|+.+...+ +||||+++.+.+......++|+|++ |++|..-+-.+.-+++..+.
T Consensus        35 tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aS  113 (355)
T KOG0033|consen   35 TGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS  113 (355)
T ss_pred             chHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-CCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHH
Confidence            6788888877432     1   33467777777 9999999999999999999999999 88887666554568888899


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .++.|+++++.|+|.++|+|||+||+|+++...
T Consensus       114 H~~rQiLeal~yCH~n~IvHRDvkP~nllLASK  146 (355)
T KOG0033|consen  114 HCIQQILEALAYCHSNGIVHRDLKPENLLLASK  146 (355)
T ss_pred             HHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence            999999999999999999999999999999554

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.84  E-value=1.4e-19  Score=117.19  Aligned_cols=104  Identities=16%  Similarity=0.162  Sum_probs=90.4

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+.....         .+|+..+..+ +|||++++++.+..++..+++||++ +++|.+++...+.+++...
T Consensus        25 ~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  103 (305)
T cd05609          25 TRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA  103 (305)
T ss_pred             CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHH
Confidence            578899998865421         1355566666 9999999999999999999999999 8899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||++++.+
T Consensus       104 ~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~  138 (305)
T cd05609         104 RMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG  138 (305)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.3e-19  Score=114.73  Aligned_cols=105  Identities=18%  Similarity=0.250  Sum_probs=89.1

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+......         .+...+....+|+|++++++++..++..++++||+ +++|.+++...+.++....
T Consensus        20 ~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   99 (260)
T cd05611          20 TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWA   99 (260)
T ss_pred             CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHH
Confidence            5789999998654311         12223334458999999999999999999999999 8899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+.+++|+|++|+||++++++
T Consensus       100 ~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~  134 (260)
T cd05611         100 KQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG  134 (260)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.83  E-value=1.9e-19  Score=114.35  Aligned_cols=104  Identities=18%  Similarity=0.197  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.+|+|.+....            ..+|+..+.++ +|+|++++++++...+..++++|++ +++|.+++.+...+++
T Consensus        23 ~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  101 (265)
T cd06631          23 QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPE  101 (265)
T ss_pred             CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            57789999875332            22366667777 9999999999999999999999999 8899999987778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus       102 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  139 (265)
T cd06631         102 PVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG  139 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC
Confidence            99999999999999999999999999999999997544

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=2.4e-19  Score=114.70  Aligned_cols=104  Identities=22%  Similarity=0.354  Sum_probs=90.3

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +++.+|+|.+.....      ..|+..+.++ +|||++++++.+..++..+++||++ +++|.+++... ..+++..+..
T Consensus        29 ~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~  107 (280)
T cd06611          29 TGLFAAAKIIQIESEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRY  107 (280)
T ss_pred             CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHH
Confidence            578899999864432      2367777777 8999999999999999999999999 88999988653 4699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.++.|+|+++++|+|++|+||+++.++
T Consensus       108 ~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~  140 (280)
T cd06611         108 VCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG  140 (280)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCChhhEEECCCC
Confidence            999999999999999999999999999997654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=2.8e-19  Score=113.11  Aligned_cols=104  Identities=19%  Similarity=0.305  Sum_probs=90.8

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +++.+|+|.+....      ..+|+..+.++ +|||++++++.+...+.++++||++ +++|.+++... ..++...+..
T Consensus        27 ~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~  105 (262)
T cd06613          27 TGELVAIKVIKLEPGDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAY  105 (262)
T ss_pred             CCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHH
Confidence            56789999986542      22466677777 9999999999999999999999999 78999988765 6799999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       106 ~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~  138 (262)
T cd06613         106 VCRETLKGLAYLHETGKIHRDIKGANILLTEDG  138 (262)
T ss_pred             HHHHHHHHHHHHHhCCceecCCChhhEEECCCC
Confidence            999999999999999999999999999997655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.83  E-value=1.2e-19  Score=115.32  Aligned_cols=104  Identities=17%  Similarity=0.243  Sum_probs=90.2

Q ss_pred             CCcEEEEEEecccc---------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC
Q psy14425          2 AGIVVVLEIMSREA---------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~---------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~   65 (114)
                      +++.+|+|.+....               ...|+..+.++ +|||++++++++...+..++++|++ +++|.+++...+.
T Consensus        24 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  102 (267)
T cd06628          24 SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA  102 (267)
T ss_pred             CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccC
Confidence            46889999885332               12356667777 9999999999999999999999999 8899999987777


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++...+..++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       103 l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~  143 (267)
T cd06628         103 FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG  143 (267)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC
Confidence            99999999999999999999999999999999999997655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.83  E-value=1.6e-19  Score=115.64  Aligned_cols=104  Identities=26%  Similarity=0.426  Sum_probs=89.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC---CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR---KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~---~~~~~~~   70 (114)
                      +|+.||+|.+....        ..+|+..+.++ +|||++++++++..++..+++||++.+++.+++...   ..++...
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~  102 (285)
T cd07861          24 TGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAEL  102 (285)
T ss_pred             CCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHH
Confidence            57899999885432        23467777777 899999999999999999999999977888887542   4589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       103 ~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~  138 (285)
T cd07861         103 VKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG  138 (285)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0608|consensus

Probab=99.83  E-value=1.2e-20  Score=129.82  Aligned_cols=88  Identities=16%  Similarity=0.190  Sum_probs=81.2

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL   97 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~   97 (114)
                      |-++|... +.+.|+++|-.|++.+.+|+||||+ ||++..++.+-+.|++..+..++.++..|++++|..|++||||||
T Consensus       679 ERDILAEA-Dn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKP  757 (1034)
T KOG0608|consen  679 ERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKP  757 (1034)
T ss_pred             hhhhHhhc-CCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCc
Confidence            44455555 8899999999999999999999999 999999999889999999999999999999999999999999999


Q ss_pred             CcEEEecCCc
Q psy14425         98 RKFVFCNAQR  107 (114)
Q Consensus        98 ~nil~~~~~~  107 (114)
                      +|||++.+++
T Consensus       758 DNILIDrdGH  767 (1034)
T KOG0608|consen  758 DNILIDRDGH  767 (1034)
T ss_pred             cceEEccCCc
Confidence            9999988775

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.83  E-value=1.6e-19  Score=117.45  Aligned_cols=102  Identities=23%  Similarity=0.336  Sum_probs=85.7

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCCCCCHHHHHHhC---------CCC
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPCSGDLHSYVRQR---------KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~~~~l~~~~~~~---------~~~   66 (114)
                      +++.+|+|.+....    ..+|+..+.++ +||||++++++|..  +..+++++|++++++.+++...         ..+
T Consensus        27 ~~~~~aiK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l  105 (317)
T cd07868          27 DDRDYALKQIEGTGISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL  105 (317)
T ss_pred             CCceEEEEEECCCCCcHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccC
Confidence            46789999986543    33578888887 99999999999864  5678999999988898887431         248


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +...++.++.|++.|+.|||++|++||||||+|||++.
T Consensus       106 ~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~  143 (317)
T cd07868         106 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG  143 (317)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEec
Confidence            89999999999999999999999999999999999953

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.83  E-value=9.4e-20  Score=120.31  Aligned_cols=101  Identities=18%  Similarity=0.240  Sum_probs=84.7

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+.++ +|+||+++++++...+.++++|||+ +++|...    ...++..+..
T Consensus        98 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~  172 (353)
T PLN00034         98 TGRLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLAD  172 (353)
T ss_pred             CCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHH
Confidence            57899999985432       22467777777 9999999999999999999999999 7777532    3456777888


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||+++++||||||+||++++++.
T Consensus       173 i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  206 (353)
T PLN00034        173 VARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN  206 (353)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC
Confidence            9999999999999999999999999999977653

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.83  E-value=2.4e-19  Score=115.01  Aligned_cols=105  Identities=18%  Similarity=0.201  Sum_probs=87.1

Q ss_pred             CCcEEEEEEeccccch---------hHHHH--HhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSA--HYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~--~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.+|+|.+......         .+...  +....+||+++.+++.+...+..+++|||+ +++|.+++...+.+++.
T Consensus        18 ~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~   97 (279)
T cd05633          18 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEK   97 (279)
T ss_pred             CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHH
Confidence            5789999988543211         11111  122237899999999999999999999999 88999998877889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus        98 ~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~  134 (279)
T cd05633          98 EMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG  134 (279)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC
Confidence            9999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.83  E-value=6.7e-20  Score=115.78  Aligned_cols=105  Identities=30%  Similarity=0.494  Sum_probs=92.2

Q ss_pred             CCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||+|.+......        .|+..+.++ +|||++++++++...+..+++||++ +++|.+++.....++...+.
T Consensus        23 ~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~  101 (260)
T PF00069_consen   23 NGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEIL  101 (260)
T ss_dssp             TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHH
T ss_pred             CCeEEEEEEeccccccccccchhhhhhhccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4678999999765422        256677778 9999999999999999999999999 66999999866889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.+||+++++|+||+|+||++++++.
T Consensus       102 ~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~  136 (260)
T PF00069_consen  102 KIAYQILEALAYLHSKGIVHRDIKPENILLDENGE  136 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSE
T ss_pred             ccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999986543

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.9e-19  Score=114.16  Aligned_cols=104  Identities=20%  Similarity=0.209  Sum_probs=90.1

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      +++.||+|.++...     ...|+..+.++ +|||++++++++...+..++++|++ +++|.+++....  .++......
T Consensus        29 ~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  107 (261)
T cd05068          29 NTTPVAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLID  107 (261)
T ss_pred             CCeEEEEEeeCCCcccHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHH
Confidence            35679999986543     22467777777 8999999999999999999999999 899999986543  589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.++|+++++|+|++|+||+++.++
T Consensus       108 ~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  140 (261)
T cd05068         108 MAAQVASGMAYLEAQNYIHRDLAARNVLVGENN  140 (261)
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC
Confidence            999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.83  E-value=1.8e-19  Score=114.60  Aligned_cols=102  Identities=19%  Similarity=0.221  Sum_probs=84.4

Q ss_pred             cEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          4 IVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      ..+|+|.+......      .++..+..+ +|||++++++++......+++||++ ++++..++.. ...++......++
T Consensus        33 ~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~  111 (262)
T cd05077          33 IKVILKVLDPSHRDISLAFFETASMMRQV-SHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA  111 (262)
T ss_pred             eeEEEeecChhhhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            35788887543221      234555555 9999999999999988999999999 7888888764 3458999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|||++|+||+++..+
T Consensus       112 ~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~  142 (262)
T cd05077         112 KQLASALSYLEDKDLVHGNVCTKNILLAREG  142 (262)
T ss_pred             HHHHHHHHHhhhCCeECCCCCcccEEEecCC
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.83  E-value=2.4e-19  Score=114.75  Aligned_cols=104  Identities=21%  Similarity=0.348  Sum_probs=88.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+..+.++ +|||++++++++..++..++++||+ ++.+..+......+++..+.
T Consensus        25 ~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~  103 (286)
T cd07847          25 TGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIK  103 (286)
T ss_pred             CCcEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHH
Confidence            57899999885321        12467777777 9999999999999999999999999 66666665555679999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.|+|+.+++|+|++|+||+++.++
T Consensus       104 ~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~  137 (286)
T cd07847         104 KIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG  137 (286)
T ss_pred             HHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC
Confidence            9999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.83  E-value=2e-19  Score=114.76  Aligned_cols=104  Identities=21%  Similarity=0.307  Sum_probs=89.5

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------C
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------R   65 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------~   65 (114)
                      .+.+|+|.+.....       ..|+..+.++ +|+|++++++++...+..+++||++ +++|.+++....         .
T Consensus        35 ~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~  113 (275)
T cd05046          35 ETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPP  113 (275)
T ss_pred             cceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccC
Confidence            46788898854332       2467777777 9999999999999989999999999 789999987644         5


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++......++.|++.++.|+|+++++|+|++|+||+++.++.
T Consensus       114 l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~  155 (275)
T cd05046         114 LSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQRE  155 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCc
Confidence            899999999999999999999999999999999999977553

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=2.1e-19  Score=116.84  Aligned_cols=104  Identities=23%  Similarity=0.359  Sum_probs=89.8

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      +|+.+|+|.+......         .|+..+.++ +|+|++++++.+..++..+++||++ +++|.+++...  ..+++.
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~  103 (316)
T cd05574          25 TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEE  103 (316)
T ss_pred             CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHH
Confidence            5789999998654322         356666666 8999999999999999999999999 88999998653  468999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|+.|++|+||||+||+++.++
T Consensus       104 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~  140 (316)
T cd05574         104 VARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG  140 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC
Confidence            9999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.83  E-value=2.3e-19  Score=114.79  Aligned_cols=104  Identities=22%  Similarity=0.173  Sum_probs=89.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~   69 (114)
                      +|+.+|+|.+....         ...|+..+.++ +|||++++++.|...+..++++||+ +++|.+++....  .++..
T Consensus        17 ~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   95 (277)
T cd05577          17 TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEA   95 (277)
T ss_pred             CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHH
Confidence            57899999885422         12366677777 8999999999999999999999999 889999887654  68999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|+++++|+||+|+||++++++
T Consensus        96 ~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~  132 (277)
T cd05577          96 RAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG  132 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            9999999999999999999999999999999997754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.83  E-value=3.1e-19  Score=112.60  Aligned_cols=104  Identities=19%  Similarity=0.234  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.|++|.+....        ...|+..+.++ +|||++++++++...+..++++|++ +++|.+++...  ..++...
T Consensus        24 ~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  102 (256)
T cd08529          24 DKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQ  102 (256)
T ss_pred             CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHH
Confidence            57889999886432        11356666676 9999999999999999999999999 88999998763  4689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       103 ~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~  138 (256)
T cd08529         103 VWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD  138 (256)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC
Confidence            999999999999999999999999999999997754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.83  E-value=4.2e-19  Score=112.18  Aligned_cols=104  Identities=20%  Similarity=0.231  Sum_probs=90.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.+++|.+....        ..+|+..+.++ +|+|++++++++...+..++++|++ +++|.+++...  ..++...
T Consensus        24 ~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~  102 (256)
T cd08221          24 DDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEM  102 (256)
T ss_pred             CCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHH
Confidence            57889999876432        22467777777 9999999999999999999999999 88999999764  4589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.++.|+|+.+++|+|++|+||+++.++
T Consensus       103 ~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~  138 (256)
T cd08221         103 VLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG  138 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.83  E-value=2.4e-19  Score=116.14  Aligned_cols=105  Identities=18%  Similarity=0.237  Sum_probs=89.2

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHH
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~   72 (114)
                      +..+|+|.++...       ...|+..+.++.+|||++++++++...+..+++|||+ +++|.+++....  .++.....
T Consensus        65 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~  144 (302)
T cd05055          65 VMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLL  144 (302)
T ss_pred             eeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHH
Confidence            4578999886432       2246777777768999999999999999999999999 899999986533  38999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|+++++|+|++|+||+++.++.
T Consensus       145 ~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  179 (302)
T cd05055         145 SFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI  179 (302)
T ss_pred             HHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCe
Confidence            99999999999999999999999999999976553

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.83  E-value=4.4e-19  Score=113.69  Aligned_cols=103  Identities=23%  Similarity=0.297  Sum_probs=87.4

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+.....       .+|+..+.++ +|||++++++++..  ...++++||++ +++|.+++.. ..+++...
T Consensus        32 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~  109 (283)
T cd05080          32 TGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQL  109 (283)
T ss_pred             CCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH-cCCCHHHH
Confidence            467899999865422       2467777777 99999999998764  34689999999 8899998865 45999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+|+||+||++++++
T Consensus       110 ~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~  144 (283)
T cd05080         110 LLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR  144 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC
Confidence            99999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.83  E-value=3.2e-19  Score=114.48  Aligned_cols=105  Identities=19%  Similarity=0.229  Sum_probs=88.8

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~   70 (114)
                      ++..||+|.++...       ..+|+..+.++ +|||++++++++...  ...+++|||+ +++|.+++.+. ..+++..
T Consensus        32 ~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  110 (284)
T cd05079          32 TGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQ  110 (284)
T ss_pred             ccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHH
Confidence            57889999986442       22467777777 999999999998764  6789999999 89999998654 3589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ...++.|++.|+.|+|++|++|+|++|+||++++++.
T Consensus       111 ~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~  147 (284)
T cd05079         111 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ  147 (284)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCC
Confidence            9999999999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.83  E-value=7.9e-20  Score=117.05  Aligned_cols=104  Identities=23%  Similarity=0.361  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +|+.+|+|.+....        ..+|+..+.++ +|||++++++++.+.+..++++||+++++.+.+.. .+.+++..+.
T Consensus        24 ~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~  102 (284)
T cd07839          24 THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVK  102 (284)
T ss_pred             CCcEEEEEEeecccccccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHH
Confidence            58899999985431        23477777777 99999999999999999999999998788888754 4569999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       103 ~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~  136 (284)
T cd07839         103 SFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG  136 (284)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.83  E-value=4.2e-19  Score=112.29  Aligned_cols=103  Identities=22%  Similarity=0.297  Sum_probs=88.7

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      +..+|+|.+....     ..+|+..+.++ +|||++++++++...+..+++|||+ +++|.+++.. .+.+++.....++
T Consensus        28 ~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  106 (256)
T cd05114          28 QIKVAIKAINEGAMSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMC  106 (256)
T ss_pred             CceEEEEecccCCccHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence            4578999876432     23477777777 9999999999999999999999999 8999998864 3458999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+|++|+|++++.++
T Consensus       107 ~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~  137 (256)
T cd05114         107 QDVCEGMEYLERNSFIHRDLAARNCLVSSTG  137 (256)
T ss_pred             HHHHHHHHHHHHCCccccccCcceEEEcCCC
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.83  E-value=2.2e-19  Score=113.83  Aligned_cols=104  Identities=21%  Similarity=0.310  Sum_probs=90.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+....         ..+|+..+.++ +|||++++++.+..++..++++|++ +++|.+++.....++....
T Consensus        17 ~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~   95 (262)
T cd05572          17 KNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTA   95 (262)
T ss_pred             CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHH
Confidence            57899999986532         12356666666 9999999999999999999999999 8999999987777899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus        96 ~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~  130 (262)
T cd05572          96 RFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG  130 (262)
T ss_pred             HHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.83  E-value=2.7e-19  Score=113.26  Aligned_cols=103  Identities=21%  Similarity=0.310  Sum_probs=88.7

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      +..+|+|.+....     ...|+..+.++ +|||++++++++...+..++++|++ +++|.+++... ..+++.....++
T Consensus        28 ~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  106 (256)
T cd05059          28 KIDVAIKMIREGAMSEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMC  106 (256)
T ss_pred             CccEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHH
Confidence            4578999886532     22467777777 9999999999999999999999999 88999998653 468999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+|++|+||++++++
T Consensus       107 ~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~  137 (256)
T cd05059         107 SDVCEAMEYLESNGFIHRDLAARNCLVGEDN  137 (256)
T ss_pred             HHHHHHHHHHHHCCcccccccHhhEEECCCC
Confidence            9999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.83  E-value=6.6e-19  Score=111.27  Aligned_cols=104  Identities=20%  Similarity=0.324  Sum_probs=88.4

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~   71 (114)
                      +++.+|+|.+....       ...|...+.++ +|||++++++.+.+++.+++++|++ ++++.+++...  ..++....
T Consensus        24 ~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~  102 (255)
T cd08219          24 SDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTI  102 (255)
T ss_pred             CCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHH
Confidence            57889999885432       22356666666 9999999999999999999999999 88999888642  35889999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.++|++|++|+|++|+||+++.++
T Consensus       103 ~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~  137 (255)
T cd08219         103 LQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG  137 (255)
T ss_pred             HHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=3.8e-19  Score=112.43  Aligned_cols=104  Identities=22%  Similarity=0.296  Sum_probs=91.0

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      .|+.+|+|.+.....     .+|+..+.++ +|+|++++++++.+.+..+++||++ +++|.+++....  .+++.....
T Consensus        28 ~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~  106 (256)
T cd05039          28 RGQKVAVKCLKDDSTAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLG  106 (256)
T ss_pred             cCcEEEEEEeccchhHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHH
Confidence            468899999976543     2466677777 9999999999999999999999999 789999987654  689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+||+|+||+++.++
T Consensus       107 ~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~  139 (256)
T cd05039         107 FALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL  139 (256)
T ss_pred             HHHHHHHHHHHHHhCCccchhcccceEEEeCCC
Confidence            999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.83  E-value=3.9e-19  Score=114.87  Aligned_cols=103  Identities=17%  Similarity=0.241  Sum_probs=88.7

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.+|+|.+......      .|+..+..+ +|+|++++++.|..+...++++||+ +++|.+++.. ..++......+
T Consensus        44 ~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i  121 (296)
T cd06654          44 TGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  121 (296)
T ss_pred             CCcEEEEEEEecCCcchHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHH
Confidence            5788999988654322      356666665 9999999999999999999999999 8899998854 46889999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       122 ~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~  153 (296)
T cd06654         122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDG  153 (296)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            99999999999999999999999999997655

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.82  E-value=9.1e-20  Score=115.28  Aligned_cols=105  Identities=23%  Similarity=0.292  Sum_probs=91.4

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+.....         ..|+..+.++ +|||++++++.+..++..++++|++ +++|.+++.+.+.+++...
T Consensus        17 ~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   95 (265)
T cd05579          17 TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVA   95 (265)
T ss_pred             CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHH
Confidence            588999999865432         1345566666 8999999999999999999999999 8899999987678999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||++++++.
T Consensus        96 ~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~  131 (265)
T cd05579          96 RIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGH  131 (265)
T ss_pred             HHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCC
Confidence            999999999999999999999999999999977653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.82  E-value=3.4e-19  Score=112.40  Aligned_cols=104  Identities=24%  Similarity=0.307  Sum_probs=91.1

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC---------C
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR---------K   64 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~---------~   64 (114)
                      ++..+|+|.+......       .|+..+..+ +|+|++++++++.....++++||++ +++|.+++...         .
T Consensus        22 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  100 (262)
T cd00192          22 KTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKS  100 (262)
T ss_pred             CCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccc
Confidence            3778999998655332       356667777 7999999999999999999999999 99999999764         6


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+++.....++.|++.|+.++|+++++|+|++|+||+++.++
T Consensus       101 ~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~  142 (262)
T cd00192         101 TLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL  142 (262)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC
Confidence            689999999999999999999999999999999999997754

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.82  E-value=2.2e-19  Score=114.36  Aligned_cols=104  Identities=19%  Similarity=0.237  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc----------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC
Q psy14425          2 AGIVVVLEIMSREA----------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK   64 (114)
Q Consensus         2 t~~~~avK~~~~~~----------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~   64 (114)
                      +|+.+|+|.+....                ...|+..+.++ +|||++++++++..++..++++|++ +++|.+.+...+
T Consensus        25 ~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  103 (272)
T cd06629          25 TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG  103 (272)
T ss_pred             CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhcc
Confidence            57889999875311                12356666666 9999999999999999999999999 899999998777


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++......++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       104 ~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~  145 (272)
T cd06629         104 RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG  145 (272)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC
Confidence            899999999999999999999999999999999999997544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.82  E-value=3.9e-19  Score=114.29  Aligned_cols=104  Identities=22%  Similarity=0.270  Sum_probs=88.4

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-----------
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-----------   64 (114)
                      +..+|+|.+....      ..+|+..+.++ +|||++++++++...+..++++|++ +++|.+++...+           
T Consensus        35 ~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~  113 (288)
T cd05093          35 KILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNR  113 (288)
T ss_pred             ceEEEEEecCCcCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCC
Confidence            4568889886432      22467777777 9999999999999999999999999 889999886432           


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 --RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 --~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                        .+++.....++.|++.++.|+|++|++|||+||+||++++++.
T Consensus       114 ~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~  158 (288)
T cd05093         114 PAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  158 (288)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence              3899999999999999999999999999999999999976553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG4236|consensus

Probab=99.82  E-value=1.8e-19  Score=122.15  Aligned_cols=104  Identities=24%  Similarity=0.327  Sum_probs=91.3

Q ss_pred             CCCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHH-H-hCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYV-R-QRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~-~-~~~~~~~~~   70 (114)
                      .||+.||||.+++-.        ..+|+.++.++ .||.|+.+.-.|++.+.++.|||-+.|+..+.+ . +.+++++..
T Consensus       587 ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~  665 (888)
T KOG4236|consen  587 KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERI  665 (888)
T ss_pred             ccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHH
Confidence            489999999996532        33578888888 999999999999999999999999977766665 3 457899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .+.++.|++.|+.|||.+||+|.|+||+|+|+...
T Consensus       666 TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~  700 (888)
T KOG4236|consen  666 TKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA  700 (888)
T ss_pred             HHHHHHHHHHHHHHhhhcceeeccCCchheeeccC
Confidence            99999999999999999999999999999999664

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.82  E-value=3.2e-19  Score=114.68  Aligned_cols=104  Identities=16%  Similarity=0.148  Sum_probs=89.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      +|+.+|+|.+....         ...|+..+.++ +|+|++.+.+.+..++..++++|++ +++|...+...  ..+++.
T Consensus        24 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  102 (285)
T cd05632          24 TGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEE  102 (285)
T ss_pred             CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHH
Confidence            57889999985432         22467777777 9999999999999999999999999 88998877543  359999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       103 ~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~  139 (285)
T cd05632         103 RALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG  139 (285)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC
Confidence            9999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.82  E-value=2.5e-19  Score=117.37  Aligned_cols=104  Identities=20%  Similarity=0.263  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc--------------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR   61 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~   61 (114)
                      +|+.||+|.+....                    ..+|+..+.++ +|+|++++++++...+..+++||++.+++.+++.
T Consensus        33 ~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~  111 (335)
T PTZ00024         33 TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMGLVDVYVEGDFINLVMDIMASDLKKVVD  111 (335)
T ss_pred             CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceeeeeEEEecCCcEEEEEeccccCHHHHHH
Confidence            57889999885432                    22467777777 9999999999999999999999999889999987


Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++......++.|++.|+.|+|+.|++|+||+|+||+++..+
T Consensus       112 ~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~  156 (335)
T PTZ00024        112 RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG  156 (335)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC
Confidence            777799999999999999999999999999999999999997654

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.82  E-value=4.6e-19  Score=112.59  Aligned_cols=104  Identities=18%  Similarity=0.287  Sum_probs=88.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~   67 (114)
                      +|+.+|+|.+....         ..+|+..+.++ +|||++++++++...+..++++|++ +++|.+++..    ...++
T Consensus        26 ~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~  104 (267)
T cd08228          26 DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIP  104 (267)
T ss_pred             CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCC
Confidence            67899999875321         12366677777 9999999999999999999999999 7899888753    23488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       105 ~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~  143 (267)
T cd08228         105 ERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG  143 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.82  E-value=3.6e-19  Score=114.08  Aligned_cols=106  Identities=19%  Similarity=0.210  Sum_probs=87.7

Q ss_pred             CCcEEEEEEeccccch---------hHHH--HHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLS--AHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~--~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.||+|.+......         .+..  .+.+...||+++.+.+.|...+..++++||+ +++|.+++...+.+++.
T Consensus        18 ~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~   97 (278)
T cd05606          18 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA   97 (278)
T ss_pred             CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHH
Confidence            5789999998653211         1111  1222248999999999999999999999999 89999988777789999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|+|+++++|+|++|+||+++.++.
T Consensus        98 ~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~  135 (278)
T cd05606          98 EMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH  135 (278)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC
Confidence            99999999999999999999999999999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.82  E-value=7.3e-20  Score=115.81  Aligned_cols=105  Identities=20%  Similarity=0.303  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+....         ..+|+..+.++ +|||++++++++..++..++++|++ +++|.+.+.....++...+
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  102 (258)
T cd05578          24 TKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQV  102 (258)
T ss_pred             CCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHH
Confidence            68899999986432         12356667777 9999999999999999999999999 8899999977678999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|.++++|+|++|+||++++++.
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~  138 (258)
T cd05578         103 KFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH  138 (258)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCC
Confidence            999999999999999999999999999999976543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.82  E-value=3.8e-19  Score=112.95  Aligned_cols=104  Identities=15%  Similarity=0.245  Sum_probs=89.6

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      +++.+|+|.+..+..     ..|+..+.++ +|||++++++++...+.++++||++ +++|.+++...  ..++......
T Consensus        30 ~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~  108 (263)
T cd05052          30 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY  108 (263)
T ss_pred             CCceEEEEEecCCchHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHH
Confidence            477899999865432     2467777776 9999999999999999999999999 88999998653  3588999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       109 ~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~  141 (263)
T cd05052         109 MATQISSAMEYLEKKNFIHRDLAARNCLVGENH  141 (263)
T ss_pred             HHHHHHHHHHHHHhCCEeecccCcceEEEcCCC
Confidence            999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.82  E-value=2.6e-19  Score=113.08  Aligned_cols=100  Identities=17%  Similarity=0.183  Sum_probs=84.6

Q ss_pred             EEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHHHHH
Q psy14425          5 VVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKLFRQ   77 (114)
Q Consensus         5 ~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~   77 (114)
                      .+++|.+.....     .+|+..+.++ +|||++++++++.. +..++++|++ +++|.+++.... .++......++.|
T Consensus        32 ~v~~k~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  109 (259)
T cd05037          32 SVVLKVLGSDHRDSLAFFETASLMSQL-SHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQ  109 (259)
T ss_pred             eeeeeccccchhhHHHHHHHHHHHHcC-CCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHH
Confidence            477777654332     2356666666 99999999999887 7789999999 889999987655 6899999999999


Q ss_pred             HHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         78 IAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        78 ~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|+.|+|+++++|+||||+||+++..+
T Consensus       110 i~~~l~~LH~~~i~H~dlkp~Nill~~~~  138 (259)
T cd05037         110 LASALHYLEDKKLVHGNVCGKNILVARYG  138 (259)
T ss_pred             HHHHHHHHhhCCeecccCccceEEEecCc
Confidence            99999999999999999999999998766

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.82  E-value=5.6e-19  Score=113.77  Aligned_cols=104  Identities=21%  Similarity=0.288  Sum_probs=88.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCC--CCHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR--LKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~--~~~~~~   71 (114)
                      +|+.||+|.+....        ...|+..+.++ +|||++++++++..++..+++|||+++++.+.+.....  ++...+
T Consensus        26 ~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~  104 (294)
T PLN00009         26 TNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLI  104 (294)
T ss_pred             CCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHH
Confidence            57899999885432        22467777777 99999999999999999999999997788888765433  578888


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||+++..+
T Consensus       105 ~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~  139 (294)
T PLN00009        105 KTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT  139 (294)
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC
Confidence            89999999999999999999999999999998544

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.82  E-value=3.4e-19  Score=119.58  Aligned_cols=104  Identities=20%  Similarity=0.279  Sum_probs=86.2

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      +..||+|.+....       ...|+..+.++..||||+++++++...+..+++|||+ +|+|.+++..+           
T Consensus        67 ~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~  146 (400)
T cd05105          67 VMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEK  146 (400)
T ss_pred             ceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhcccccc
Confidence            3469999986432       2246777777745999999999999999999999999 89998887432           


Q ss_pred             --------------------------------------------------------------------------------
Q psy14425         64 --------------------------------------------------------------------------------   63 (114)
Q Consensus        64 --------------------------------------------------------------------------------   63 (114)
                                                                                                      
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  226 (400)
T cd05105         147 PKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLL  226 (400)
T ss_pred             ccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHH
Confidence                                                                                            


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                           ..++......++.|++.|+.|+|.++++|+|+||+||+++.++
T Consensus       227 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~  274 (400)
T cd05105         227 SDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK  274 (400)
T ss_pred             HhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence                 1366777788999999999999999999999999999997754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.82  E-value=3.5e-19  Score=113.40  Aligned_cols=103  Identities=19%  Similarity=0.264  Sum_probs=84.1

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-----CCCHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-----RLKEA   69 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-----~~~~~   69 (114)
                      ...+|+|.+.....       .+|+..+..+ +||||+++++.+...+.++++||++ +++|.+++....     ..+..
T Consensus        22 ~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  100 (269)
T cd05042          22 KARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKD  100 (269)
T ss_pred             CeEEEEeecCccCChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHH
Confidence            34678887654321       1355555555 9999999999999999999999999 889999986532     24677


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|+++++|||+||+||+++.++
T Consensus       101 ~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~  137 (269)
T cd05042         101 VLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL  137 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC
Confidence            7889999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.82  E-value=4.2e-19  Score=113.62  Aligned_cols=104  Identities=24%  Similarity=0.376  Sum_probs=89.6

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC---CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR---KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~---~~~~~~~~   71 (114)
                      +|+.||+|.+..+.       ...|+..+.++ +|||++++++++...+..++++|++.+++.+++...   ..+++..+
T Consensus        24 ~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  102 (284)
T cd07836          24 TGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTV  102 (284)
T ss_pred             CCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHH
Confidence            58899999886442       12467777777 999999999999999999999999977898887643   35899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       103 ~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~  137 (284)
T cd07836         103 KSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG  137 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.82  E-value=6.4e-19  Score=113.90  Aligned_cols=103  Identities=17%  Similarity=0.241  Sum_probs=88.6

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.||+|.+......      .|+..+..+ +|||+++++++|..++..+++|||+ ++++.+++.. ..++......+
T Consensus        43 ~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~  120 (297)
T cd06656          43 TGQEVAIKQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  120 (297)
T ss_pred             CCCEEEEEEEecCccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHH
Confidence            5789999998654322      355566666 9999999999999999999999999 8899998854 55888999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.++.|+|+.+++|+||+|+||+++.++
T Consensus       121 ~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~  152 (297)
T cd06656         121 CRECLQALDFLHSNQVIHRDIKSDNILLGMDG  152 (297)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.82  E-value=8.3e-19  Score=112.20  Aligned_cols=103  Identities=14%  Similarity=0.246  Sum_probs=89.2

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +++.+|+|.++....       .+|+..+.++ +|||++++++++.+++..+++||++ +++|.+++.. +.++......
T Consensus        28 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~  105 (277)
T cd06640          28 TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIAT  105 (277)
T ss_pred             CCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHH
Confidence            578899999865432       2356666666 9999999999999999999999999 8899998865 5688999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       106 ~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~  138 (277)
T cd06640         106 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG  138 (277)
T ss_pred             HHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC
Confidence            999999999999999999999999999997655

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=5.2e-19  Score=112.08  Aligned_cols=102  Identities=19%  Similarity=0.290  Sum_probs=88.0

Q ss_pred             cEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHHH
Q psy14425          4 IVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLFR   76 (114)
Q Consensus         4 ~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~   76 (114)
                      ..+|+|.+.....     .+|+..+.++ +|||++++++++...+..+++||++ +++|.+++... ..+++..+..++.
T Consensus        29 ~~~aik~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~  107 (256)
T cd05113          29 YDVAIKMIKEGSMSEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCK  107 (256)
T ss_pred             CcEEEEEcCCCcccHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence            4589998865432     3467777777 9999999999999888999999999 88999998653 3689999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |++.|+.|+|+.+++|+|++|+||++++++
T Consensus       108 ~i~~~l~~lH~~~i~H~dl~p~nili~~~~  137 (256)
T cd05113         108 DVCEGMAYLESKQFIHRDLAARNCLVDDQG  137 (256)
T ss_pred             HHHHHHHHHHhCCeeccccCcceEEEcCCC
Confidence            999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.82  E-value=4.1e-19  Score=113.85  Aligned_cols=104  Identities=21%  Similarity=0.270  Sum_probs=87.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----------   63 (114)
                      ++..+|+|.+....       ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+++...          
T Consensus        33 ~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  111 (283)
T cd05090          33 HAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSS  111 (283)
T ss_pred             CcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCcccccc
Confidence            35688999986422       23467777777 9999999999999999999999999 88999988432          


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                             ..+++.....++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       112 ~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~  161 (283)
T cd05090         112 DEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence                   1367888889999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.82  E-value=4.8e-19  Score=127.22  Aligned_cols=104  Identities=18%  Similarity=0.233  Sum_probs=87.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--------
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--------   63 (114)
                      +|+.||+|.+..+.         ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+++...        
T Consensus        26 tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e  104 (932)
T PRK13184         26 CSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSK  104 (932)
T ss_pred             CCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccch
Confidence            58899999986432         22366677777 9999999999999999999999999 88999988531        


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ---KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ---~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         ...+...+..++.|++.|+.|+|++|++|||+||+||+++.++
T Consensus       105 ~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg  150 (932)
T PRK13184        105 ELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFG  150 (932)
T ss_pred             hhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCC
Confidence               1245667788999999999999999999999999999997654

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.82  E-value=3.8e-19  Score=113.00  Aligned_cols=103  Identities=23%  Similarity=0.378  Sum_probs=86.2

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~   72 (114)
                      +..|+||.++....       .+|++.+.++ +||||+++++++...+..++++|++ .|+|.+++...  ..++.....
T Consensus        28 ~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~  106 (259)
T PF07714_consen   28 NQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRL  106 (259)
T ss_dssp             EEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHH
T ss_pred             CEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57899999954322       2367777788 9999999999999888899999999 78999999875  569999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||+++++|++++++||+++.++
T Consensus       107 ~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~  140 (259)
T PF07714_consen  107 SIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG  140 (259)
T ss_dssp             HHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT
T ss_pred             cccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999998654

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.82  E-value=5.2e-19  Score=113.05  Aligned_cols=108  Identities=24%  Similarity=0.337  Sum_probs=89.7

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHhC-CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQR-KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~   71 (114)
                      +++.+|+|.++....       ..|+..+.++.+|+|++++++++.++  +..++++|++.+++.+.+... ..+++..+
T Consensus        23 ~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~  102 (282)
T cd07831          23 TGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRV  102 (282)
T ss_pred             CCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHH
Confidence            578899998865321       13566677776799999999999987  889999999977888888653 46899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||+++.+..++
T Consensus       103 ~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl  140 (282)
T cd07831         103 KSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKL  140 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEE
Confidence            99999999999999999999999999999998733333

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.82  E-value=8.6e-19  Score=112.75  Aligned_cols=104  Identities=25%  Similarity=0.304  Sum_probs=87.6

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+..+ +|+|++++++++..++..++++|++.+++.+.+.. ...++......
T Consensus        29 ~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  107 (291)
T cd07870          29 NGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRL  107 (291)
T ss_pred             CCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHH
Confidence            57899999985432       22467777777 99999999999999999999999997777776654 34578888899


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+||+|+||+++.++
T Consensus       108 ~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~  140 (291)
T cd07870         108 FMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG  140 (291)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC
Confidence            999999999999999999999999999996654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.82  E-value=6.5e-19  Score=113.43  Aligned_cols=103  Identities=21%  Similarity=0.228  Sum_probs=87.6

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC------------
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR------------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~------------   63 (114)
                      +..+|+|.+....      ...|+..+.++ +|||++++++++...+..+++|||+ +++|.+++...            
T Consensus        35 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~  113 (291)
T cd05094          35 KMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP  113 (291)
T ss_pred             ceeeEEEecCCccHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCccccccccccc
Confidence            4458888876443      23467777777 9999999999999999999999999 89999998643            


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          +.+++.....++.|++.|+.|+|+++++|+||+|+||++++++
T Consensus       114 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~  160 (291)
T cd05094         114 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL  160 (291)
T ss_pred             ccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence                2378899999999999999999999999999999999997665

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.82  E-value=6.8e-19  Score=111.08  Aligned_cols=104  Identities=18%  Similarity=0.202  Sum_probs=90.3

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      +++.||+|.+....           ...|+..+.++ +|+|++++++++...+.+++++||+ +++|.+++.....++..
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  102 (258)
T cd06632          24 DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEP  102 (258)
T ss_pred             CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHH
Confidence            57899999885432           12356666776 9999999999999999999999999 78999999877778999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|+|+.+++|+|++|+||+++.++
T Consensus       103 ~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~  139 (258)
T cd06632         103 VIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG  139 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            9999999999999999999999999999999997654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.82  E-value=6.3e-19  Score=114.29  Aligned_cols=103  Identities=18%  Similarity=0.282  Sum_probs=87.1

Q ss_pred             cEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-----------
Q psy14425          4 IVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-----------   64 (114)
Q Consensus         4 ~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-----------   64 (114)
                      ..+|+|.+......       .|+..+.++.+|||++++++++...+..++++|++ +++|.+++....           
T Consensus        51 ~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~  130 (307)
T cd05098          51 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT  130 (307)
T ss_pred             ceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccc
Confidence            46999998754221       35666666768999999999999999999999999 889999986532           


Q ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 -----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 -----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                           .++......++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       131 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~  177 (307)
T cd05098         131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  177 (307)
T ss_pred             cCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCC
Confidence                 378888999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.82  E-value=6.9e-19  Score=112.78  Aligned_cols=104  Identities=20%  Similarity=0.245  Sum_probs=87.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhC-CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~   71 (114)
                      +++.||+|.+....      ...|+..+.++ +|||++++++++..  ...+++++||+ +++|.+++... ..+++...
T Consensus        32 ~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~  110 (284)
T cd05081          32 TGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKL  110 (284)
T ss_pred             CCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHH
Confidence            47789999986543      23477777777 99999999998753  45789999999 89999998653 45899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+|+||+||++++++
T Consensus       111 ~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~  145 (284)
T cd05081         111 LLYASQICKGMEYLGSKRYVHRDLATRNILVESEN  145 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC
Confidence            99999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.82  E-value=3.9e-19  Score=117.56  Aligned_cols=102  Identities=26%  Similarity=0.300  Sum_probs=83.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+..+ +|||+++++++|...+      .++++||++.+++.+.+.  ..++
T Consensus        45 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~  121 (359)
T cd07876          45 LGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH--MELD  121 (359)
T ss_pred             CCceeEEEEecccccchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh--ccCC
Confidence            58899999986432        12356666666 9999999999986443      579999999777777663  3488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       122 ~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~  160 (359)
T cd07876         122 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  160 (359)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            889999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.82  E-value=5.3e-19  Score=113.83  Aligned_cols=104  Identities=27%  Similarity=0.395  Sum_probs=89.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~~-~~~~~~~   70 (114)
                      +++.+|+|.++...        ..+|+..+.++ +|||++++++++...  +..++++|++.++|.+++... ..++...
T Consensus        29 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~  107 (293)
T cd07843          29 TGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSE  107 (293)
T ss_pred             CCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHH
Confidence            57889999986432        12467777777 899999999999877  899999999977999888654 3589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|||+++++|+||+|+||++++++
T Consensus       108 ~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~  143 (293)
T cd07843         108 VKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG  143 (293)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.82  E-value=4.6e-19  Score=114.00  Aligned_cols=105  Identities=18%  Similarity=0.178  Sum_probs=89.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      +++.||+|.+....         ...|+.++.++ +|++++.+++.+.+.+..+++||++ +++|.+.+...  ..++..
T Consensus        24 ~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~  102 (285)
T cd05630          24 TGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEG  102 (285)
T ss_pred             CCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHH
Confidence            57899999885432         12366677777 9999999999999999999999999 88999888543  358999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ....++.|++.|+.|+|+.+++|+|++|+||+++..+.
T Consensus       103 ~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~  140 (285)
T cd05630         103 RAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH  140 (285)
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC
Confidence            99999999999999999999999999999999976543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.82  E-value=8.4e-19  Score=112.90  Aligned_cols=103  Identities=23%  Similarity=0.290  Sum_probs=88.9

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      +..+|+|.+.....       ..|+..+.++ +|||++++++++..++..++++|++ +++|.+++....          
T Consensus        46 ~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  124 (296)
T cd05051          46 PVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNS  124 (296)
T ss_pred             ceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccC
Confidence            45689999865432       2367777777 9999999999999999999999999 889999986644          


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 -RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                       .++...+..++.|++.|+.|+|+++++|+|+||+||++++++
T Consensus       125 ~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~  167 (296)
T cd05051         125 KSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNY  167 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCC
Confidence             588999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.82  E-value=6.5e-19  Score=112.09  Aligned_cols=101  Identities=21%  Similarity=0.264  Sum_probs=87.0

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .+|+|.++...       ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+++... +.++......++
T Consensus        34 ~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~  112 (267)
T cd05066          34 PVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGML  112 (267)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            68999886432       22356667776 9999999999999999999999999 88999998754 458999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.++|+++++|+|++|+|++++.++
T Consensus       113 ~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  143 (267)
T cd05066         113 RGIASGMKYLSDMGYVHRDLAARNILVNSNL  143 (267)
T ss_pred             HHHHHHHHHHHHCCEeehhhchhcEEECCCC
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.82  E-value=6.4e-19  Score=111.60  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=86.9

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ++..+|+|.++....        ..|+..+.++ +|||++++++++. .+..+++||++ +++|.+++.....+++....
T Consensus        21 ~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~   98 (257)
T cd05116          21 SEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNIT   98 (257)
T ss_pred             CceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHH
Confidence            468899998864431        2356666666 9999999999875 45678999999 78999999776779999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++|+|++|.||++++++
T Consensus        99 ~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~  132 (257)
T cd05116          99 ELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH  132 (257)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC
Confidence            9999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.82  E-value=1.2e-18  Score=111.63  Aligned_cols=104  Identities=18%  Similarity=0.355  Sum_probs=88.2

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      ++..+|+|.+......      .|+..+..+ +|||++++++++..++..++++||+ ++++...+.. ...+++.....
T Consensus        29 ~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~  107 (282)
T cd06643          29 TGVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRV  107 (282)
T ss_pred             CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHH
Confidence            4678899988654322      356666667 9999999999999999999999999 7888887654 45689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+.|++|+|++|+||+++.++
T Consensus       108 ~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~  140 (282)
T cd06643         108 VCKQTLEALNYLHENKIIHRDLKAGNILFTLDG  140 (282)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCcccEEEccCC
Confidence            999999999999999999999999999997654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.82  E-value=5.1e-19  Score=114.72  Aligned_cols=102  Identities=23%  Similarity=0.311  Sum_probs=87.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHhC-----CC
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQR-----KR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~~-----~~   65 (114)
                      +|+.||+|.+....         ...|+..+.++ +|||++++++++...  +.+++++|++++++.+.+...     ..
T Consensus        26 ~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~  104 (316)
T cd07842          26 DGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVS  104 (316)
T ss_pred             CCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcC
Confidence            57899999997622         22467777777 999999999999988  889999999977887776421     25


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++...++.++.|++.|+.|+|+++++|+||+|+||+++.
T Consensus       105 ~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~  143 (316)
T cd07842         105 IPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMG  143 (316)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcC
Confidence            889999999999999999999999999999999999977

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.81  E-value=9e-19  Score=111.97  Aligned_cols=103  Identities=21%  Similarity=0.241  Sum_probs=85.3

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      ++.+|+|.+.....       .+|+..+..+ +|||++++++++...+..+++||++ +++|.+++....          
T Consensus        36 ~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  114 (277)
T cd05062          36 ETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQA  114 (277)
T ss_pred             eeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCcccccccccc
Confidence            46799998854322       2356666666 9999999999999999999999999 889999886422          


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++...+..++.|++.|+.|+|+++++|+|+||+||++++++
T Consensus       115 ~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~  156 (277)
T cd05062         115 PPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF  156 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC
Confidence            246777888999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.81  E-value=7.1e-19  Score=111.57  Aligned_cols=104  Identities=19%  Similarity=0.308  Sum_probs=88.9

Q ss_pred             CCcEEEEEEeccc---------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSRE---------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~---------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~   67 (114)
                      +|+.+|+|.++..         ...+|+..+.++ +|+|++++++.+...+..+++|||+ +++|..++..    ...++
T Consensus        26 ~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  104 (267)
T cd08224          26 DGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIP  104 (267)
T ss_pred             CCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcC
Confidence            6889999987532         122467777777 9999999999999999999999999 8899988853    23488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.+++.|+.|+|+.|++|+|++|+||+++.++
T Consensus       105 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~  143 (267)
T cd08224         105 ERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG  143 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC
Confidence            999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.81  E-value=8e-19  Score=112.14  Aligned_cols=103  Identities=21%  Similarity=0.225  Sum_probs=88.2

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      ++.+|+|.++....       .+|+.++.++ +|+|++++++++......+++||++ +++|.+++...+          
T Consensus        35 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~  113 (280)
T cd05049          35 KELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPD  113 (280)
T ss_pred             cceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccc
Confidence            57899999865432       2467777777 9999999999999999999999999 899999986532          


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          .+++.....++.|++.|+.++|++|++|+|++|+||+++.++
T Consensus       114 ~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049         114 SPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence                367888999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.81  E-value=8e-19  Score=113.45  Aligned_cols=103  Identities=18%  Similarity=0.282  Sum_probs=89.1

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.+|+|.+......      +|+..+..+ +|||++++++.+...+.+++++|++ +++|..++.. ..+++..+..+
T Consensus        43 ~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i  120 (296)
T cd06655          43 TGQEVAIKQINLQKQPKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAV  120 (296)
T ss_pred             CCcEEEEEEEecccCchHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHH
Confidence            5789999988644322      356666666 9999999999999999999999999 8899998855 46899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       121 ~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~  152 (296)
T cd06655         121 CRECLQALEFLHANQVIHRDIKSDNVLLGMDG  152 (296)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.81  E-value=1e-18  Score=111.90  Aligned_cols=103  Identities=21%  Similarity=0.283  Sum_probs=87.4

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      +..+|+|.+.....       .+|+..+.++ +|||++++++++...+..++++|++ +++|.+++...           
T Consensus        35 ~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~  113 (283)
T cd05048          35 ATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESG  113 (283)
T ss_pred             eeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccc
Confidence            36789998864332       2466667776 9999999999999999999999999 88999988653           


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                           ..++......++.|++.|+.|||+++++|+|+||+||++++++
T Consensus       114 ~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048         114 DETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             cccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence                 3477888999999999999999999999999999999997765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0662|consensus

Probab=99.81  E-value=9.6e-20  Score=109.22  Aligned_cols=105  Identities=26%  Similarity=0.402  Sum_probs=92.9

Q ss_pred             CCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      |++.||+|.+..++..        +|+..+..+ +|.||++++++..+++.+.+|+|+|..+|..+..+ ++.++...+.
T Consensus        26 t~eivalkrvrlddddegvpssalreicllkel-khknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~r  104 (292)
T KOG0662|consen   26 THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVR  104 (292)
T ss_pred             ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHH
Confidence            6789999998655422        478778877 99999999999999999999999998899998865 5679999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +++.|++.|+.++|+.++.|||+||+|.+++.++.
T Consensus       105 sfmlqllrgl~fchshnvlhrdlkpqnllin~nge  139 (292)
T KOG0662|consen  105 SFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE  139 (292)
T ss_pred             HHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc
Confidence            99999999999999999999999999999976553

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.81  E-value=9.6e-19  Score=112.42  Aligned_cols=104  Identities=20%  Similarity=0.299  Sum_probs=83.5

Q ss_pred             CcEEEEEEecccc--------chhHHHHHhhh--CCCCCcceEEEEEE-----cCCEEEEEecCCCCCHHHHHHhC--CC
Q psy14425          3 GIVVVLEIMSREA--------SGNLLSAHYRL--DSHPHINSLHEVLL-----GDKLAYLVFPPCSGDLHSYVRQR--KR   65 (114)
Q Consensus         3 ~~~~avK~~~~~~--------~~~e~~~~~~~--~~h~~i~~~~~~~~-----~~~~~~~v~e~~~~~l~~~~~~~--~~   65 (114)
                      |+.+|+|.+....        ...|+..+..+  .+|||++++++++.     ....+++++|++.+++.+++...  ..
T Consensus        27 ~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~  106 (290)
T cd07862          27 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG  106 (290)
T ss_pred             CeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCC
Confidence            6789999885432        11244444443  37999999999985     24568999999988999988653  35


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++..+..++.|++.|+.|+|++|++||||||+||++++++
T Consensus       107 ~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~  147 (290)
T cd07862         107 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG  147 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence            89999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.81  E-value=1.9e-19  Score=114.16  Aligned_cols=102  Identities=16%  Similarity=0.205  Sum_probs=84.4

Q ss_pred             cEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHHH
Q psy14425          4 IVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~~   75 (114)
                      ..+|+|.+.....      ..+...+..+ .|||++++++++..++..+++|||+ +++|.+++...+ .+++.....++
T Consensus        28 ~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  106 (258)
T cd05078          28 TEVLLKVLDKSHRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVA  106 (258)
T ss_pred             chhhHHhhcchhHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHH
Confidence            3477777654321      2244455555 9999999999999989999999999 889999987644 58999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|||+||+||+++.++
T Consensus       107 ~qi~~~l~~lH~~~iiH~dlkp~nili~~~~  137 (258)
T cd05078         107 KQLAWALHFLEDKGLTHGNVCAKNVLLIREE  137 (258)
T ss_pred             HHHHHHHHHHHHCCeecCCCccceEEEeccc
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.81  E-value=1.5e-18  Score=110.28  Aligned_cols=103  Identities=19%  Similarity=0.289  Sum_probs=88.2

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      ...+|+|.++.....       .|+..+.++ +|||++++++.+...+..+++||++ +++|.+++... +.++......
T Consensus        32 ~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~  110 (266)
T cd05033          32 EIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVG  110 (266)
T ss_pred             cceEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHH
Confidence            357899988644322       356667667 9999999999999999999999999 88999998653 4689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       111 ~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~  143 (266)
T cd05033         111 MLRGIASGMKYLSEMNYVHRDLAARNILVNSNL  143 (266)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC
Confidence            999999999999999999999999999997765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.5e-18  Score=109.20  Aligned_cols=104  Identities=18%  Similarity=0.263  Sum_probs=91.7

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.+|+|.+.....        .+|++.+.++ +|||++++++++.+++..++++|++ +++|.+++.....+++....
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~  102 (254)
T cd06627          24 TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVA  102 (254)
T ss_pred             CCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHH
Confidence            567899999865543        2466667777 9999999999999999999999999 78999999877789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.++|++|++|+|++|+||++++++
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~  136 (254)
T cd06627         103 VYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG  136 (254)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC
Confidence            9999999999999999999999999999997754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.81  E-value=3.6e-19  Score=113.77  Aligned_cols=103  Identities=16%  Similarity=0.240  Sum_probs=89.2

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.+|+|.++...       ...|+..+.++ +|||++++++++..++..++++|++ +++|.+++.. +.++...+..
T Consensus        28 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~  105 (277)
T cd06642          28 TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIAT  105 (277)
T ss_pred             CCeEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHH
Confidence            47789999986443       23467777777 9999999999999999999999999 7899888754 5688999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       106 ~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~  138 (277)
T cd06642         106 ILREILKGLDYLHSERKIHRDIKAANVLLSEQG  138 (277)
T ss_pred             HHHHHHHHHHHHhcCCeeccCCChheEEEeCCC
Confidence            999999999999999999999999999997655

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.81  E-value=9.3e-19  Score=113.33  Aligned_cols=104  Identities=18%  Similarity=0.274  Sum_probs=86.3

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      +..+|+|.+....       ...|+..+..+.+|||++++++++...+..+++|||+ +++|.+++...           
T Consensus        47 ~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  126 (304)
T cd05101          47 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI  126 (304)
T ss_pred             ceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCccccccccc
Confidence            3468999886432       2235666666668999999999999999999999999 88999998653           


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                           ..++......++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       127 ~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~  174 (304)
T cd05101         127 ARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENN  174 (304)
T ss_pred             ccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCC
Confidence                 2367778889999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.81  E-value=1.1e-18  Score=111.09  Aligned_cols=102  Identities=19%  Similarity=0.232  Sum_probs=87.4

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCC--CHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRL--KEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~--~~~~~   71 (114)
                      +++.+|+|.+.....      .+|+..+.++ +|+|++++++++..++..++++|++ +++|.+.+... ..+  +....
T Consensus        32 ~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  110 (268)
T cd06624          32 TQVRIAIKEIPERDSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTI  110 (268)
T ss_pred             CCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHH
Confidence            467899998865432      2466667776 9999999999999999999999999 88999998653 345  78888


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||+++.
T Consensus       111 ~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~  143 (268)
T cd06624         111 IFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT  143 (268)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC
Confidence            899999999999999999999999999999965

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.81  E-value=1.1e-18  Score=111.62  Aligned_cols=104  Identities=17%  Similarity=0.232  Sum_probs=89.2

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCC-CCCHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRK-RLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~   70 (114)
                      +++.+|+|.+.....       .+|+..+.++ .|||++++++++..  ....++++|++ +++|.+++.... .++...
T Consensus        32 ~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~  110 (284)
T cd05038          32 TGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKR  110 (284)
T ss_pred             CceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHH
Confidence            467899999865433       2467777777 99999999999876  56899999999 889999997644 589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       111 ~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~  146 (284)
T cd05038         111 LLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED  146 (284)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC
Confidence            999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.81  E-value=6.5e-19  Score=111.88  Aligned_cols=104  Identities=18%  Similarity=0.317  Sum_probs=88.5

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~   67 (114)
                      +|+.+|+|.+....         ..+|+..+.++ +|||++++++++..++..++++|++ +++|.+++..    ...++
T Consensus        26 ~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~  104 (267)
T cd08229          26 DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP  104 (267)
T ss_pred             CCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCC
Confidence            67899999875421         12356667776 9999999999999999999999999 7899988753    34589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.....++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       105 ~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~  143 (267)
T cd08229         105 EKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG  143 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.81  E-value=1.1e-18  Score=111.06  Aligned_cols=102  Identities=21%  Similarity=0.287  Sum_probs=87.1

Q ss_pred             cEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          4 IVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         4 ~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      ..||+|.+......       .|+..+.++ +|||++++++++..++..+++||++ +++|.+++... +.++......+
T Consensus        33 ~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  111 (269)
T cd05065          33 IFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGM  111 (269)
T ss_pred             eeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHH
Confidence            36999998654222       356666666 9999999999999999999999999 78999988653 45899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       112 ~~~l~~al~~lH~~g~~H~dl~p~nili~~~~  143 (269)
T cd05065         112 LRGIAAGMKYLSEMNYVHRDLAARNILVNSNL  143 (269)
T ss_pred             HHHHHHHHHHHHHCCEeecccChheEEEcCCC
Confidence            99999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.81  E-value=9.6e-19  Score=113.37  Aligned_cols=102  Identities=19%  Similarity=0.258  Sum_probs=85.2

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC------------
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK------------   64 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~------------   64 (114)
                      .+|+|.+....       ..+|+..+.++.+|||++++++++...+.+++++||+ +++|.+++...+            
T Consensus        36 ~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  115 (303)
T cd05088          36 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  115 (303)
T ss_pred             eEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccc
Confidence            35777665322       1236777777778999999999999999999999999 889999886432            


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          .++...+..++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       116 ~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~  161 (303)
T cd05088         116 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  161 (303)
T ss_pred             cccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence                478889999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.81  E-value=8.3e-19  Score=110.65  Aligned_cols=104  Identities=27%  Similarity=0.367  Sum_probs=89.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +++.+|+|.+....        ...|+..+.++ +|||++++++.+...+..++++|++ +++|.+++...  ..+++..
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (256)
T cd08220          24 DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDT  102 (256)
T ss_pred             CCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHH
Confidence            57889999986542        22356667776 9999999999999999999999999 88999998653  3489999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.+++.++.|+|++|++|+|++|+||++++++
T Consensus       103 ~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~  138 (256)
T cd08220         103 ILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK  138 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.81  E-value=1.5e-18  Score=109.32  Aligned_cols=104  Identities=19%  Similarity=0.251  Sum_probs=88.8

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +++.+|+|.+.....       .+|+..+.++ +|||++++++++...+..+++||++ +++|.+++... ..+++....
T Consensus        18 ~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~   96 (250)
T cd05085          18 DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLV   96 (250)
T ss_pred             CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHH
Confidence            357799998865432       2366667776 9999999999999999999999999 89999988653 457899999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.|+|++|++|+|++|+||+++.++
T Consensus        97 ~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~  130 (250)
T cd05085          97 KFALDAAAGMAYLESKNCIHRDLAARNCLVGENN  130 (250)
T ss_pred             HHHHHHHHHHHHHHhCCeeecccChheEEEcCCC
Confidence            9999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.81  E-value=1.3e-18  Score=113.16  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=86.5

Q ss_pred             cEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC------------
Q psy14425          4 IVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR------------   63 (114)
Q Consensus         4 ~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~------------   63 (114)
                      ..+|+|.+.....       ..|+..+.++.+|||++++++++...+.+++++|++ +++|.+++...            
T Consensus        45 ~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~  124 (314)
T cd05099          45 VTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDIT  124 (314)
T ss_pred             eEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCccccccccc
Confidence            4688998864322       236666666657999999999999999999999999 88999998643            


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          ..++......++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       125 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~  171 (314)
T cd05099         125 KVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             CCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCC
Confidence                2378888899999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.81  E-value=8.2e-19  Score=112.25  Aligned_cols=105  Identities=12%  Similarity=0.207  Sum_probs=87.5

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh----CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ----RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~----~~~~~~~~   70 (114)
                      +|+.||+|.++.....       .|+....+..+|||++++++++..++..++++|++.++|.+++..    ...+++..
T Consensus        25 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~  104 (283)
T cd06617          25 TGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDI  104 (283)
T ss_pred             CCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHH
Confidence            6899999998654321       234444555699999999999999999999999998888877753    23589999


Q ss_pred             HHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      ++.++.|++.|+.|+|++ +++|+|++|+||+++.++
T Consensus       105 ~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~  141 (283)
T cd06617         105 LGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG  141 (283)
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC
Confidence            999999999999999997 999999999999997654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.81  E-value=1.2e-18  Score=111.51  Aligned_cols=104  Identities=15%  Similarity=0.219  Sum_probs=87.2

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-------CC
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-------RL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-------~~   66 (114)
                      ++..+|+|.+....       ...|+..+.++ +|+|++++++++...+..+++||++ +++|.+++...+       .+
T Consensus        35 ~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~  113 (277)
T cd05036          35 VELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSL  113 (277)
T ss_pred             CceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCC
Confidence            45778999875332       12355666666 9999999999999888999999999 899999986532       47


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.....++.|++.|+.|+|+++++|+|++|+||+++..+
T Consensus       114 ~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~  153 (277)
T cd05036         114 TMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG  153 (277)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC
Confidence            8899999999999999999999999999999999997643

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.81  E-value=1.1e-18  Score=112.00  Aligned_cols=104  Identities=19%  Similarity=0.275  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~   74 (114)
                      +++.+|+|.+....     ...|+..+.++ +|+|++++++++...+..++++|++ +++|.+++.... .++......+
T Consensus        43 ~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i  121 (286)
T cd06614          43 TGKEVAIKKMRLRKQNKELIINEILIMKDC-KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYV  121 (286)
T ss_pred             CCcEEEEEEEecCchhHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHH
Confidence            47889999987543     23467777777 9999999999999999999999999 799999998765 7999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.++|+.|++|+|++|+||+++.++
T Consensus       122 ~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~  153 (286)
T cd06614         122 CREVLQGLEYLHSQNVIHRDIKSDNILLSKDG  153 (286)
T ss_pred             HHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0666|consensus

Probab=99.81  E-value=1.7e-20  Score=119.95  Aligned_cols=104  Identities=23%  Similarity=0.328  Sum_probs=88.7

Q ss_pred             cEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCCCCCHHHHHHh-----CCCCCHH
Q psy14425          4 IVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQ-----RKRLKEA   69 (114)
Q Consensus         4 ~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~~~~l~~~~~~-----~~~~~~~   69 (114)
                      +.+|+|.++.+.        ..+|+..++.+ +|||++.+..+|.. +..+|+++||...+|++++..     ...++..
T Consensus        54 k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~  132 (438)
T KOG0666|consen   54 KEYAIKKFKGEKDGTGISMSACREIALLREL-KHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRS  132 (438)
T ss_pred             hhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHH
Confidence            367888886552        22577777777 99999999999987 889999999999999999953     2358999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .+.+++.|++.|+.|||++=++|||+||.|||+..++..
T Consensus       133 mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgpe  171 (438)
T KOG0666|consen  133 MVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPE  171 (438)
T ss_pred             HHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCc
Confidence            999999999999999999999999999999999877544

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.81  E-value=9e-19  Score=113.77  Aligned_cols=102  Identities=22%  Similarity=0.337  Sum_probs=84.7

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEE--cCCEEEEEecCCCCCHHHHHHhC---------CCC
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLL--GDKLAYLVFPPCSGDLHSYVRQR---------KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~--~~~~~~~v~e~~~~~l~~~~~~~---------~~~   66 (114)
                      ++..+|+|.+....    ..+|+..+..+ +|||++++++++.  .+...++++|++++++.+++...         ..+
T Consensus        27 ~~~~~a~k~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l  105 (317)
T cd07867          27 DEKEYALKQIEGTGISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQL  105 (317)
T ss_pred             ccceEEEEEecCCCCcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccC
Confidence            45789999986543    33577778777 9999999999985  45678999999988888877421         247


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++..+..++.|++.|+.|+|+++++||||||+||++..
T Consensus       106 ~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~  143 (317)
T cd07867         106 PRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG  143 (317)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEcc
Confidence            88899999999999999999999999999999999943

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.81  E-value=3e-19  Score=117.36  Aligned_cols=103  Identities=22%  Similarity=0.282  Sum_probs=86.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +++.||+|.+....        ..+|+..+.++ +||||++++++|...      ...++++++++++|.+++.. ..++
T Consensus        39 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~l~  116 (343)
T cd07878          39 LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC-QKLS  116 (343)
T ss_pred             CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhc-CCCC
Confidence            57899999986532        22467777777 999999999988543      45799999999999888743 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|+|++|++||||||+||++++++
T Consensus       117 ~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~  155 (343)
T cd07878         117 DEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC  155 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC
Confidence            999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.81  E-value=1.7e-18  Score=111.49  Aligned_cols=104  Identities=18%  Similarity=0.313  Sum_probs=88.5

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +++.+|+|.+......      .|+..+..+ +|||++++++++..++..+++||++ ++++...+.. ...+++..+..
T Consensus        36 ~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~  114 (292)
T cd06644          36 TGALAAAKVIETKSEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV  114 (292)
T ss_pred             CCceEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHH
Confidence            5788999998655322      356666666 9999999999999999999999999 7888877654 45689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.++.|+|+.+++|+|++|+||+++.++
T Consensus       115 ~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~  147 (292)
T cd06644         115 ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG  147 (292)
T ss_pred             HHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC
Confidence            999999999999999999999999999997544

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.81  E-value=1.2e-18  Score=110.53  Aligned_cols=102  Identities=19%  Similarity=0.290  Sum_probs=85.4

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +..+|+|.+....       ..+|+..+.++ +|||+++++++++. ...+++|||+ +++|.+++.. ...++...+..
T Consensus        22 ~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~   99 (257)
T cd05115          22 QIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKKDEITVSNVVE   99 (257)
T ss_pred             ceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHH
Confidence            4568999886442       22466777777 99999999998864 5789999999 8899998864 45689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||++++++
T Consensus       100 ~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~  132 (257)
T cd05115         100 LMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH  132 (257)
T ss_pred             HHHHHHHHHHHHHhcCeeecccchheEEEcCCC
Confidence            999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.81  E-value=1.2e-18  Score=110.40  Aligned_cols=104  Identities=20%  Similarity=0.317  Sum_probs=91.1

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.+|+|.+.....        ..|+..+.++ +|+|++++++.+...+.+++++|++ +++|.+++.....++.....
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (264)
T cd06626          24 TGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIR  102 (264)
T ss_pred             CCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHH
Confidence            578899999865433        2366677777 9999999999999999999999999 89999999776678999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+.+++|+|++|+||++++.+
T Consensus       103 ~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~  136 (264)
T cd06626         103 VYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG  136 (264)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            9999999999999999999999999999997754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.81  E-value=1.1e-18  Score=112.52  Aligned_cols=101  Identities=23%  Similarity=0.289  Sum_probs=86.0

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC------------
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK------------   64 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~------------   64 (114)
                      .||+|.+....       ..+|+..+.++ +|+|++++++++...+..+++|||+ +++|.+++....            
T Consensus        46 ~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  124 (295)
T cd05097          46 LVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIP  124 (295)
T ss_pred             EEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCC
Confidence            58999986542       22477778877 9999999999999999999999999 889999885421            


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++......++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       125 ~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~  166 (295)
T cd05097         125 SVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHY  166 (295)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCC
Confidence            367888899999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.81  E-value=8.5e-19  Score=111.04  Aligned_cols=103  Identities=23%  Similarity=0.291  Sum_probs=89.1

Q ss_pred             CcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      ++.+|+|.+.....      ..|+..+..+ +|||++++++++...+..+++||++ +++|.+++.+.  ..++......
T Consensus        30 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  108 (261)
T cd05148          30 RVRVAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLID  108 (261)
T ss_pred             CCcEEEEeccccchhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHH
Confidence            57789999865543      2466677777 9999999999999999999999999 88999998653  4589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       109 ~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~  141 (261)
T cd05148         109 MACQVAEGMAYLEEQNSIHRDLAARNILVGEDL  141 (261)
T ss_pred             HHHHHHHHHHHHHHCCeeccccCcceEEEcCCc
Confidence            999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=1.6e-18  Score=109.74  Aligned_cols=102  Identities=24%  Similarity=0.316  Sum_probs=87.4

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +..+|+|.+.....       ..|+..+.++ .|||++++++++. .+..+++||++ +++|.+++.....+++.....+
T Consensus        23 ~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  100 (257)
T cd05060          23 EVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKEL  100 (257)
T ss_pred             cceEEEEecccccchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHH
Confidence            46899999865443       2356667776 9999999999876 45689999999 8899999987777999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.++.|+|.++++|+||+|+||+++.++
T Consensus       101 ~~qi~~~l~~lh~~~i~H~di~p~nili~~~~  132 (257)
T cd05060         101 AHQVAMGMAYLESKHFVHRDLAARNVLLVNRH  132 (257)
T ss_pred             HHHHHHHHHHHhhcCeeccCcccceEEEcCCC
Confidence            99999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.81  E-value=1e-18  Score=112.07  Aligned_cols=105  Identities=27%  Similarity=0.348  Sum_probs=84.8

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhh--CCCCCcceEEEEEEc-----CCEEEEEecCCCCCHHHHHHhC--C
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRL--DSHPHINSLHEVLLG-----DKLAYLVFPPCSGDLHSYVRQR--K   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~--~~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~l~~~~~~~--~   64 (114)
                      ||+.||+|.++...        ...|+..+.++  .+|||++++++++..     ....++++|++.+++.+++...  .
T Consensus        24 ~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~  103 (288)
T cd07863          24 SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPP  103 (288)
T ss_pred             CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCC
Confidence            68899999886432        11355544443  379999999999864     3468999999977898888653  3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++...+..++.|++.|+.|+|++|++|+|+||+||++++++
T Consensus       104 ~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~  145 (288)
T cd07863         104 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  145 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            489999999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.81  E-value=3.6e-19  Score=114.90  Aligned_cols=103  Identities=17%  Similarity=0.244  Sum_probs=88.3

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.+|+|.+....      ..+|+..+.++ +|||++++++.+..++..++++|++ +++|.+++.. +.++......+
T Consensus        46 ~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~  123 (292)
T cd06658          46 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATV  123 (292)
T ss_pred             CCCEEEEEEEecchHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHH
Confidence            57889999886432      22466666666 9999999999999999999999999 7889888744 56899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       124 ~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~  155 (292)
T cd06658         124 CLSVLRALSYLHNQGVIHRDIKSDSILLTSDG  155 (292)
T ss_pred             HHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.81  E-value=1.1e-18  Score=110.84  Aligned_cols=104  Identities=20%  Similarity=0.191  Sum_probs=87.8

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....           ...|+..+.++ +|||++++++++..+  ..+++++|++ +++|.+++.....++
T Consensus        26 ~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~  104 (265)
T cd06652          26 TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALT  104 (265)
T ss_pred             CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCC
Confidence            57899999874321           12366777777 999999999998763  5788999999 889999987767788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.++.|+|+++++|+|++|+||+++.++
T Consensus       105 ~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~  143 (265)
T cd06652         105 ENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG  143 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC
Confidence            999999999999999999999999999999999997655

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.81  E-value=1.3e-18  Score=111.41  Aligned_cols=104  Identities=25%  Similarity=0.313  Sum_probs=90.2

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +|+.+|+|.+....        ...|+..+.++ +|||++++++++..++..++++|+++++|.+++.. ...++...+.
T Consensus        24 ~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~  102 (286)
T cd07832          24 TGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVK  102 (286)
T ss_pred             CCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHH
Confidence            57899999986543        22466677777 89999999999999999999999998899998864 3568999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.|+|+.+++|+|++|+||+++..+
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~  136 (286)
T cd07832         103 SYMRMLLKGVAYMHANGIMHRDLKPANLLISADG  136 (286)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC
Confidence            9999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.81  E-value=1.1e-18  Score=117.15  Aligned_cols=104  Identities=22%  Similarity=0.316  Sum_probs=86.0

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      ++.||+|.+....       ..+|+.++.++..||||+++++++...+..++++||+ +|+|.+++...+          
T Consensus        67 ~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~  146 (401)
T cd05107          67 TMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDK  146 (401)
T ss_pred             ceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccc
Confidence            4679999996542       2246777777744999999999999999999999999 899999885421          


Q ss_pred             --------------------------------------------------------------------------------
Q psy14425         65 --------------------------------------------------------------------------------   64 (114)
Q Consensus        65 --------------------------------------------------------------------------------   64 (114)
                                                                                                      
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (401)
T cd05107         147 NRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRR  226 (401)
T ss_pred             ccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcch
Confidence                                                                                            


Q ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 --------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 --------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                              .++......++.|++.|+.|+|+++++|+|+||+||+++..+
T Consensus       227 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         227 DTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCC
Confidence                    245666788999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.81  E-value=1.8e-18  Score=109.10  Aligned_cols=104  Identities=18%  Similarity=0.278  Sum_probs=91.1

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      +++.+|+|.+....    ..+|+..+.++ +|||++++++++..+...++++|++ +++|.+++.. ...+++.....++
T Consensus        27 ~~~~~~~k~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~  105 (256)
T cd06612          27 TGQVVAIKVVPVEEDLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL  105 (256)
T ss_pred             CCcEEEEEEeecHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence            46889999987543    33567777777 9999999999999999999999999 7899999865 3468999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+|++|+||++++++
T Consensus       106 ~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~  136 (256)
T cd06612         106 YQTLKGLEYLHSNKKIHRDIKAGNILLNEEG  136 (256)
T ss_pred             HHHHHHHHHHHHCCcccCCCCcceEEECCCC
Confidence            9999999999999999999999999997765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.81  E-value=1.2e-18  Score=110.96  Aligned_cols=104  Identities=20%  Similarity=0.214  Sum_probs=85.5

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-----CCCH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-----RLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-----~~~~   68 (114)
                      ++..+|+|.+.....       .+|+..+.++ +|||++++++++......+++|||+ +++|.+++....     .++.
T Consensus        21 ~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~   99 (269)
T cd05087          21 TPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDP   99 (269)
T ss_pred             CceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccH
Confidence            345789998864421       1356666666 9999999999999999999999999 899999986421     3566


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .....++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       100 ~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~  137 (269)
T cd05087         100 TTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL  137 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC
Confidence            77788999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.81  E-value=1.5e-18  Score=111.67  Aligned_cols=103  Identities=18%  Similarity=0.301  Sum_probs=86.8

Q ss_pred             cEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC------------
Q psy14425          4 IVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR------------   63 (114)
Q Consensus         4 ~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~------------   63 (114)
                      ..+|+|.+......       .|+..+.++.+|+|++++++++..++.++++|||+ +++|..++...            
T Consensus        43 ~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~  122 (293)
T cd05053          43 STVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDP  122 (293)
T ss_pred             eeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccc
Confidence            57899988654222       35666666658999999999999999999999999 88999988532            


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          ..+++.....++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       123 ~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~  169 (293)
T cd05053         123 RPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH  169 (293)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC
Confidence                3478889999999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.5e-18  Score=110.70  Aligned_cols=103  Identities=16%  Similarity=0.288  Sum_probs=90.1

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+..+.       ...|+..+..+ +|+|++++++++..+...++++|++ +++|.+++... .++......
T Consensus        25 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~  102 (274)
T cd06609          25 TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAF  102 (274)
T ss_pred             CCeEEEEEEeeccccchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHH
Confidence            57899999986543       22466666777 8999999999999999999999999 88999998664 789999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.++.|+|+++++|+|++|+|+++++++
T Consensus       103 ~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~  135 (274)
T cd06609         103 ILREVLLGLEYLHEEGKIHRDIKAANILLSEEG  135 (274)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.80  E-value=2e-18  Score=111.38  Aligned_cols=103  Identities=18%  Similarity=0.258  Sum_probs=86.6

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      +..+|+|.+....       ...|+..+.++ +|+|++++++++..++..+++||++ +++|.+++....          
T Consensus        46 ~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  124 (296)
T cd05095          46 PVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV  124 (296)
T ss_pred             eeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccc
Confidence            3468999986542       22467777777 9999999999999999999999999 889999886532          


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 -RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                       .++......++.|++.|+.|+|++|++|+|+||+||+++.++
T Consensus       125 ~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~  167 (296)
T cd05095         125 VTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNY  167 (296)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCC
Confidence             266778999999999999999999999999999999997644

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.80  E-value=1.5e-18  Score=109.59  Aligned_cols=104  Identities=21%  Similarity=0.337  Sum_probs=88.8

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.+|+|.+....        ..+|+..+.++ +|||++++.+++...+..++++|++ +++|.+.+...  ..+++..
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  102 (256)
T cd08218          24 DGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQ  102 (256)
T ss_pred             CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHH
Confidence            57889999885431        22466677777 9999999999999999999999999 88999988653  2578999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       103 ~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~  138 (256)
T cd08218         103 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG  138 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.80  E-value=6.3e-19  Score=112.89  Aligned_cols=104  Identities=23%  Similarity=0.361  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh--CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ--RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~--~~~~~~~~~   71 (114)
                      +|+.+|+|.+..+.        ..+|+..+.++ +|||++++++++...+..+++|||+.+++..++..  ...++...+
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~  102 (284)
T cd07860          24 TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLI  102 (284)
T ss_pred             CCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHH
Confidence            67899999886432        23477788888 99999999999999999999999997788888754  345899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|..+++|+|++|+||+++.++
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~  137 (284)
T cd07860         103 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG  137 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.80  E-value=1.7e-18  Score=110.91  Aligned_cols=100  Identities=12%  Similarity=0.204  Sum_probs=84.9

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +++.+|+|.+..+..       .+|+..+.++ +|||++++++.+...+..++++|++ ++++..+    ..+++.....
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~   99 (279)
T cd06619          25 TRRILAVKVIPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGR   99 (279)
T ss_pred             CCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHH
Confidence            678999999865421       1366667777 9999999999999999999999999 7777543    3478888999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       100 ~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~  132 (279)
T cd06619         100 IAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG  132 (279)
T ss_pred             HHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.80  E-value=1.7e-18  Score=109.63  Aligned_cols=104  Identities=15%  Similarity=0.204  Sum_probs=91.9

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+.....       ..|+..+.++ +|+|++++++++..++..++++|++ +++|.+++.....++......
T Consensus        25 ~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~  103 (264)
T cd06623          25 TGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAY  103 (264)
T ss_pred             CCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHH
Confidence            588999999865532       2356667777 8999999999999999999999999 799999998777899999999


Q ss_pred             HHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.++.|+|+ ++++|+|++|+||+++.++
T Consensus       104 ~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~  137 (264)
T cd06623         104 IARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG  137 (264)
T ss_pred             HHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC
Confidence            99999999999999 9999999999999997655

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.80  E-value=1.9e-18  Score=108.93  Aligned_cols=103  Identities=21%  Similarity=0.307  Sum_probs=90.0

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC--CCHHHHH
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR--LKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~--~~~~~~~   72 (114)
                      +..+|+|.+......       .|+..+..+ +|+|++++++++...+..+++||++ +++|.+++.....  +++....
T Consensus        28 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~  106 (258)
T smart00219       28 EVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLL  106 (258)
T ss_pred             CceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHH
Confidence            478999998655432       356667777 9999999999999999999999999 8899999876443  8999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.++|+++++|+|++|+||++++++
T Consensus       107 ~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~  140 (258)
T smart00219      107 SFALQIARGMEYLESKNFIHRDLAARNCLVGENL  140 (258)
T ss_pred             HHHHHHHHHHHHHhcCCeeecccccceEEEccCC
Confidence            9999999999999999999999999999998765

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=2.1e-18  Score=110.11  Aligned_cols=104  Identities=23%  Similarity=0.249  Sum_probs=86.9

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----------C
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----------K   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----------~   64 (114)
                      +..+|+|.+.....       ..|+..+..+ +|||++++++++...+..+++||++ +++|.+++...          .
T Consensus        36 ~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  114 (277)
T cd05032          36 ETRVAIKTVNENASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLG  114 (277)
T ss_pred             ceeEEEEecCCccCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCC
Confidence            47899999864432       1356666666 9999999999999999999999999 88999988542          1


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++.
T Consensus       115 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~  157 (277)
T cd05032         115 PPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT  157 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC
Confidence            3677888999999999999999999999999999999976553

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.80  E-value=2e-18  Score=109.44  Aligned_cols=104  Identities=14%  Similarity=0.186  Sum_probs=88.7

Q ss_pred             CcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~~~~~~   74 (114)
                      ++.+|+|.+.....     ..|+..+.++ +|+|++++++.+..++..++++|++ +++|.+++..  ...++......+
T Consensus        30 ~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  108 (261)
T cd05072          30 STKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF  108 (261)
T ss_pred             CceEEEEEccCCchhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHH
Confidence            56789998764332     2467777777 9999999999999999999999999 8899998864  345888889999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|+|+++++|+|++|+||++++++.
T Consensus       109 ~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~  141 (261)
T cd05072         109 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLM  141 (261)
T ss_pred             HHHHHHHHHHHHHCCeeccccchhhEEecCCCc
Confidence            999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0612|consensus

Probab=99.80  E-value=2.2e-20  Score=133.96  Aligned_cols=106  Identities=22%  Similarity=0.227  Sum_probs=92.0

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      |++.||+|++++...-         .|-.++... +.+.|+.++-.|++.+++|+||||+ ||+|..++.+..++|+.++
T Consensus        99 t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~A  177 (1317)
T KOG0612|consen   99 TEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWA  177 (1317)
T ss_pred             cccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHH
Confidence            6888999988764321         233344444 7899999999999999999999999 9999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      ..|...++.|+.-+|+.|.+|||+||+|+|++..|+-
T Consensus       178 rFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHi  214 (1317)
T KOG0612|consen  178 RFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHI  214 (1317)
T ss_pred             HHHHHHHHHHHHHHHhccceeccCCcceeEecccCcE
Confidence            9999999999999999999999999999999887763

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.80  E-value=2.3e-18  Score=109.53  Aligned_cols=104  Identities=21%  Similarity=0.196  Sum_probs=88.3

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....           ..+|+..+.++ +|||++++++++..  .+..++++|++ +++|.+.+...+.++
T Consensus        26 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~  104 (266)
T cd06651          26 TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALT  104 (266)
T ss_pred             CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCC
Confidence            57899999875321           22366677777 99999999999875  46789999999 789999997777789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       105 ~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~  143 (266)
T cd06651         105 ESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG  143 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            999999999999999999999999999999999997654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=2e-18  Score=109.66  Aligned_cols=104  Identities=20%  Similarity=0.183  Sum_probs=88.0

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~~~~~~   67 (114)
                      +|+.+|+|.+....           ...|+..+.++ +|+|++++++++.+.  +.+++++|++ +++|.+.+...+.++
T Consensus        26 ~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~  104 (264)
T cd06653          26 TGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALT  104 (264)
T ss_pred             CCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCC
Confidence            68899999874321           12356677777 999999999998753  5688999999 889999988777789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       105 ~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~  143 (264)
T cd06653         105 ENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG  143 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999999997655

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.80  E-value=2.4e-18  Score=108.75  Aligned_cols=100  Identities=18%  Similarity=0.197  Sum_probs=87.6

Q ss_pred             EEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHHH
Q psy14425          5 VVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARKL   74 (114)
Q Consensus         5 ~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~~   74 (114)
                      .+|+|.+.....       ..|+..+.++ +|||++++++.+.. +..++++|++ +++|.+.+....  .+++...+.+
T Consensus        25 ~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  102 (257)
T cd05040          25 PVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY  102 (257)
T ss_pred             EEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHH
Confidence            689999876544       2367777777 99999999999988 8999999999 899999987643  5899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       103 ~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~  134 (257)
T cd05040         103 AVQIANGMRYLESKRFIHRDLAARNILLASDD  134 (257)
T ss_pred             HHHHHHHHHHHHhCCccccccCcccEEEecCC
Confidence            99999999999999999999999999997664

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.80  E-value=2.5e-18  Score=110.18  Aligned_cols=103  Identities=20%  Similarity=0.237  Sum_probs=87.3

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-----------
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-----------   64 (114)
                      +..+|+|.+....      ...|+..+.++ +|+|++++++++...+..++++|++ +++|.+++...+           
T Consensus        35 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~  113 (280)
T cd05092          35 KMLVAVKALKEASESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGED  113 (280)
T ss_pred             ceEEEEEecCcCCHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhccccc
Confidence            5578888875432      33467777777 9999999999999999999999999 889999886532           


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          .++......++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       114 ~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092         114 VAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence                378899999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG1989|consensus

Probab=99.80  E-value=3.6e-19  Score=124.60  Aligned_cols=108  Identities=24%  Similarity=0.322  Sum_probs=89.0

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEE-E---c---CCEEEEEecCC-CCCHHHHHHh--CCCC
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVL-L---G---DKLAYLVFPPC-SGDLHSYVRQ--RKRL   66 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~-~---~---~~~~~~v~e~~-~~~l~~~~~~--~~~~   66 (114)
                      |.+||+|.+-..+      ..+|+.++..+.+|+|||.+++.. .   .   .-.+++.|||| +|+|.+++..  ..+|
T Consensus        62 ~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~l  141 (738)
T KOG1989|consen   62 GKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRL  141 (738)
T ss_pred             CceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccC
Confidence            4789999874332      335899999998999999999943 2   1   23589999999 7899999974  3569


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCC-cccc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      ++.+++.|+.++++|+.+||...  ++|||||.+|+|++.++ -+++
T Consensus       142 te~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLC  188 (738)
T KOG1989|consen  142 TEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLC  188 (738)
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeC
Confidence            99999999999999999999987  99999999999997766 3443

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.80  E-value=1.6e-18  Score=111.09  Aligned_cols=106  Identities=15%  Similarity=0.269  Sum_probs=87.0

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEE-----cCCEEEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLL-----GDKLAYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~-----~~~~~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      +|+.+|+|.++...     ...|...+.++.+|||++++++++.     .++..+++|||+ +++|.+++..    ...+
T Consensus        42 ~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  121 (286)
T cd06638          42 NGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERM  121 (286)
T ss_pred             CCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccc
Confidence            57889999886432     2246667777767999999999874     456799999999 8899887642    3458


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++..+..++.|++.|+.|+|+.+++|+|++|+||+++.++.
T Consensus       122 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~  162 (286)
T cd06638         122 EEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG  162 (286)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCC
Confidence            88999999999999999999999999999999999977653

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.80  E-value=1.1e-18  Score=111.69  Aligned_cols=104  Identities=25%  Similarity=0.387  Sum_probs=90.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC--CCCHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK--RLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~--~~~~~~~   71 (114)
                      +|+.||+|.+....        ..+|+..+..+ +|||++++++++.+++..++++|++++++.+++....  .+++...
T Consensus        23 ~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~  101 (283)
T cd07835          23 TGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLI  101 (283)
T ss_pred             CCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHH
Confidence            58899999886432        22467777777 9999999999999999999999999889999887654  6899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       102 ~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~  136 (283)
T cd07835         102 KSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG  136 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC
Confidence            99999999999999999999999999999997644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.80  E-value=2.2e-18  Score=109.91  Aligned_cols=103  Identities=18%  Similarity=0.249  Sum_probs=86.1

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC------------
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK------------   64 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~------------   64 (114)
                      .+|+|.+....       ...|+..+.++.+|||++++++++...+..+++||++ +++|.+++....            
T Consensus        24 ~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~  103 (270)
T cd05047          24 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  103 (270)
T ss_pred             EEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhcccccccccccccc
Confidence            46788776322       2236777777778999999999999999999999999 889999986432            


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 ----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                          .++......++.|++.|+.|+|+++++|+|++|+||+++.++.
T Consensus       104 ~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~  150 (270)
T cd05047         104 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV  150 (270)
T ss_pred             CCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCe
Confidence                3788899999999999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.80  E-value=2.9e-18  Score=108.45  Aligned_cols=104  Identities=23%  Similarity=0.261  Sum_probs=87.0

Q ss_pred             CCcEEEEEEeccccc----hhHHHHHhhhCCCCCcceEEEEE-EcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS----GNLLSAHYRLDSHPHINSLHEVL-LGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~-~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      .|+.+|+|.+..+..    ..|+..+.++ +|+|++++++++ ...+..++++|++ +++|.+++....  .+++.....
T Consensus        28 ~~~~~~~k~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  106 (256)
T cd05082          28 RGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK  106 (256)
T ss_pred             cCCcEEEEEeCCCchHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHH
Confidence            367789998865532    2467777777 999999999875 4556799999999 789999986543  378899999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||++++++
T Consensus       107 ~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~  139 (256)
T cd05082         107 FSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN  139 (256)
T ss_pred             HHHHHHHHHHHHHhCCEeccccchheEEEcCCC
Confidence            999999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.80  E-value=3.5e-18  Score=109.88  Aligned_cols=103  Identities=20%  Similarity=0.280  Sum_probs=88.7

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.+|+|.+....      ..+|+..+.++ +|||++++++++..++..++++|++ +++|.+++.. ..++......+
T Consensus        43 ~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~  120 (285)
T cd06648          43 TGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATV  120 (285)
T ss_pred             CCCEEEEEEEeccchhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHH
Confidence            46789999885432      12356666666 9999999999999999999999999 8899998866 67899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.++|+++++|+|++|+||+++.++
T Consensus       121 ~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (285)
T cd06648         121 CLAVLKALSFLHAQGVIHRDIKSDSILLTSDG  152 (285)
T ss_pred             HHHHHHHHHHHHhCCeecCCCChhhEEEcCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.80  E-value=2.4e-18  Score=110.10  Aligned_cols=104  Identities=15%  Similarity=0.256  Sum_probs=89.2

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +++.+|+|.+....       ..+|+..+.++ +|||++++++++..++..++++||+ ++++.+++.. ..++......
T Consensus        28 ~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~  105 (277)
T cd06641          28 TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIAT  105 (277)
T ss_pred             CCcEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHH
Confidence            57889999886433       22356666666 9999999999999999999999999 7899988754 5689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.++.++|+++++|+|++|+||++++++.
T Consensus       106 ~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~  139 (277)
T cd06641         106 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE  139 (277)
T ss_pred             HHHHHHHHHHHHccCCeecCCCCHHhEEECCCCC
Confidence            9999999999999999999999999999977653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=3.4e-18  Score=108.29  Aligned_cols=104  Identities=18%  Similarity=0.218  Sum_probs=89.1

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~~   74 (114)
                      ++.+|+|.+....     ...|+..+.++ +|+|++++++++...+..+++||++ +++|.+++...  ..++...+..+
T Consensus        30 ~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~  108 (261)
T cd05034          30 TTKVAVKTLKPGTMSPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM  108 (261)
T ss_pred             CceEEEEEecCCccCHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHH
Confidence            4678999886542     22467777777 8999999999999989999999999 88999998654  35899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|+|+++++|+|++|+||++++++.
T Consensus       109 ~~~i~~al~~lh~~~i~h~di~p~nili~~~~~  141 (261)
T cd05034         109 AAQIAEGMAYLESRNYIHRDLAARNILVGENLV  141 (261)
T ss_pred             HHHHHHHHHHHHhCCcccCCcchheEEEcCCCC
Confidence            999999999999999999999999999976553

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.80  E-value=2.7e-18  Score=111.36  Aligned_cols=104  Identities=26%  Similarity=0.427  Sum_probs=88.2

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHh-CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQ-RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~-~~~~~~~~   70 (114)
                      +|+.||+|.+....        ...|+..+.++ +|+|++++++++...  +..+++||++.+++.+++.. ...+++..
T Consensus        31 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~  109 (309)
T cd07845          31 SGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQ  109 (309)
T ss_pred             CCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHH
Confidence            68899999985432        12477777777 999999999999754  56899999997788888865 35689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|++|++|+||+|+||++++.+
T Consensus       110 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~  145 (309)
T cd07845         110 VKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG  145 (309)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.80  E-value=3.4e-18  Score=108.00  Aligned_cols=104  Identities=28%  Similarity=0.413  Sum_probs=86.4

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~   69 (114)
                      +++.+|+|.+..+..        ..|+..+.++ +|+|++++++.+.. .+.+++++|++ ++++.+.+...  ..+++.
T Consensus        24 ~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~  102 (257)
T cd08223          24 DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPEN  102 (257)
T ss_pred             CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHH
Confidence            578899999864321        2356666666 99999999998864 45689999999 78999988653  458999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +...++.+++.|+.++|++|++|+|++|+||++++++
T Consensus       103 ~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~  139 (257)
T cd08223         103 QVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN  139 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC
Confidence            9999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.80  E-value=3.8e-18  Score=107.33  Aligned_cols=104  Identities=22%  Similarity=0.269  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +++.+++|.+....        ...|+..+.++ +|||++++++.+...  +.+++++|++ +++|.+++.....+++..
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  102 (260)
T cd06606          24 TGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV  102 (260)
T ss_pred             CCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHH
Confidence            57889999986554        22466677777 899999999999988  8999999999 899999998767899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.++.|+|+++++|+|++|+||++++++
T Consensus       103 ~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~  138 (260)
T cd06606         103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG  138 (260)
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC
Confidence            999999999999999999999999999999997744

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.80  E-value=1.3e-18  Score=114.89  Aligned_cols=102  Identities=24%  Similarity=0.262  Sum_probs=83.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +++.+|+|.+....        ..+|+..+..+ +|||+++++++|...      ...+++||++.+++.+.+..  .++
T Consensus        41 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~l~  117 (355)
T cd07874          41 LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--ELD  117 (355)
T ss_pred             CCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-CCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--cCC
Confidence            57889999986432        11356666666 999999999998643      35799999997778777643  488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       118 ~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~  156 (355)
T cd07874         118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  156 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence            888999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.80  E-value=2.6e-18  Score=110.61  Aligned_cols=103  Identities=24%  Similarity=0.335  Sum_probs=86.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCE-----EEEEecCCCCCHHHHHHhC-----
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKL-----AYLVFPPCSGDLHSYVRQR-----   63 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~-----~~~v~e~~~~~l~~~~~~~-----   63 (114)
                      +|+.||+|.+....        ...|+..+.++.+|||++++++++...+.     .+++|||+.+++.+++...     
T Consensus        25 ~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~  104 (295)
T cd07837          25 TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPG  104 (295)
T ss_pred             CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCC
Confidence            57899999875432        22477778888677999999999986655     8999999977888887542     


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         64 KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ..+++..+..++.|++.|+.|+|.++++|+|++|+||+++.
T Consensus       105 ~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~  145 (295)
T cd07837         105 RPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK  145 (295)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec
Confidence            34799999999999999999999999999999999999987

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.2e-18  Score=109.55  Aligned_cols=104  Identities=24%  Similarity=0.369  Sum_probs=91.2

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+.....         ..|+..+.++ +|||++++++.+..++..+++||++ +++|.+++.....+++...
T Consensus        17 ~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~   95 (250)
T cd05123          17 TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERA   95 (250)
T ss_pred             CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence            478999999865432         2356666666 8999999999999999999999999 8999999987777999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.++|+++++|+|++|+||+++..+
T Consensus        96 ~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~  130 (250)
T cd05123          96 RFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG  130 (250)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC
Confidence            99999999999999999999999999999997654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.80  E-value=1.2e-18  Score=112.70  Aligned_cols=103  Identities=18%  Similarity=0.265  Sum_probs=87.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.||+|.+....      ..+|+..+..+ +|||++++++++..++..++++|++ +++|...+.. ..+++.....+
T Consensus        45 ~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~  122 (297)
T cd06659          45 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATV  122 (297)
T ss_pred             CCCEEEEEEEEecccchHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHH
Confidence            57889999985432      22356666666 9999999999999999999999999 7899887644 56899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       123 ~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~  154 (297)
T cd06659         123 CESVLQALCYLHSQGVIHRDIKSDSILLTLDG  154 (297)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHeEEccCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=3.1e-18  Score=109.89  Aligned_cols=104  Identities=15%  Similarity=0.144  Sum_probs=90.2

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+....       ..+|+..+..+ +|||++++++.+...+.+++++||+ +++|.+++...+.++......
T Consensus        29 ~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  107 (284)
T cd06620          29 TGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGK  107 (284)
T ss_pred             CCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHH
Confidence            57889999875432       22466677777 9999999999999999999999999 889999887777899999999


Q ss_pred             HHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.+++.++.|+|+ .+++|+|++|+||++++++
T Consensus       108 ~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~  141 (284)
T cd06620         108 IAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG  141 (284)
T ss_pred             HHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC
Confidence            99999999999997 5899999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.80  E-value=3.5e-18  Score=107.99  Aligned_cols=103  Identities=19%  Similarity=0.274  Sum_probs=86.5

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~~   74 (114)
                      +++.+|+|.+....    ...|+..+.++ +|||++++++++... ..+++||++ +++|.+++....  .++......+
T Consensus        28 ~~~~~~iK~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  105 (254)
T cd05083          28 TGQKVAVKNIKCDVTAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQF  105 (254)
T ss_pred             CCCceEEEeecCcchHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHH
Confidence            56789999986543    23467777776 999999999998654 579999999 889999986543  4789999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       106 ~~qi~~al~~lH~~~~~H~dl~p~nili~~~~  137 (254)
T cd05083         106 SLDVAEGMEYLESKKLVHRDLAARNILVSEDG  137 (254)
T ss_pred             HHHHHHHHHHHHhCCeeccccCcceEEEcCCC
Confidence            99999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.79  E-value=5.7e-19  Score=113.14  Aligned_cols=104  Identities=24%  Similarity=0.356  Sum_probs=88.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.+|+|.+....        ..+|+..+.++ +|||++++++++..++..++++||+ ++++..+......+++....
T Consensus        25 ~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  103 (286)
T cd07846          25 TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVR  103 (286)
T ss_pred             CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHH
Confidence            57899999875332        12467777777 9999999999999999999999999 66777766555568999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.|+|+.+++|+|++|+||++++++
T Consensus       104 ~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~  137 (286)
T cd07846         104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG  137 (286)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence            9999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.79  E-value=4.4e-18  Score=109.44  Aligned_cols=103  Identities=23%  Similarity=0.250  Sum_probs=83.9

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      +..||+|.++.....       +|...+.++ +|||++++++++...+..+++|||+ +++|.+++....          
T Consensus        36 ~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  114 (288)
T cd05061          36 ETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP  114 (288)
T ss_pred             ceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCC
Confidence            347899987644321       244555566 9999999999999999999999999 899999986421          


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+......++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       115 ~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~  156 (288)
T cd05061         115 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF  156 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCC
Confidence            245667788999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.79  E-value=3.6e-18  Score=112.35  Aligned_cols=105  Identities=16%  Similarity=0.241  Sum_probs=85.7

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC---------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR---------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~---------   63 (114)
                      |++.||+|.+.....       ..|+..+.++.+|+|++++++++.. +..+++++||+ +++|.+++...         
T Consensus        36 ~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~  115 (337)
T cd05054          36 SCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRN  115 (337)
T ss_pred             ccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccc
Confidence            467899999864321       1366667777689999999998764 46788999999 88999887532         


Q ss_pred             ----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q psy14425         64 ----------------------------------------------------KRLKEAEARKLFRQIAETVRACHAQGIV   91 (114)
Q Consensus        64 ----------------------------------------------------~~~~~~~~~~~~~~~~~~l~~lh~~~i~   91 (114)
                                                                          ..+++..+..++.|++.|+.|+|+++++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~iv  195 (337)
T cd05054         116 KSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCI  195 (337)
T ss_pred             ccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence                                                                2478888999999999999999999999


Q ss_pred             cCCCCCCcEEEecCC
Q psy14425         92 LRDLKLRKFVFCNAQ  106 (114)
Q Consensus        92 h~~lk~~nil~~~~~  106 (114)
                      |||+||+||+++.++
T Consensus       196 HrDikp~Nill~~~~  210 (337)
T cd05054         196 HRDLAARNILLSENN  210 (337)
T ss_pred             cCCCCcceEEEeCCC
Confidence            999999999998654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.79  E-value=4.8e-18  Score=108.16  Aligned_cols=105  Identities=17%  Similarity=0.340  Sum_probs=87.6

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCC-CCCHHHHHHhC--CCCC
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPC-SGDLHSYVRQR--KRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~-~~~l~~~~~~~--~~~~   67 (114)
                      +++.+|+|.+....     ...|+..+.++.+|||++++++.|..      ....++++|++ +++|.+++...  ..++
T Consensus        30 ~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~  109 (272)
T cd06637          30 TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK  109 (272)
T ss_pred             CCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCC
Confidence            57889999986442     22466667777689999999999874      34689999999 78999988753  3589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.....++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       110 ~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~  148 (272)
T cd06637         110 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA  148 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC
Confidence            999999999999999999999999999999999997654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=5e-18  Score=108.42  Aligned_cols=105  Identities=17%  Similarity=0.320  Sum_probs=89.0

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhC--CCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLD--SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~--~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+....       ...|+..+.++.  .|||++++++++......+++||++ +++|.+++.. +.+++...
T Consensus        25 ~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~  103 (277)
T cd06917          25 TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYI  103 (277)
T ss_pred             CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHHHH
Confidence            57889999886432       223566666662  4999999999999999999999999 8899998865 47899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.++.|+|+.|++|+|++|+||+++..+.
T Consensus       104 ~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~  139 (277)
T cd06917         104 SVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN  139 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC
Confidence            999999999999999999999999999999986553

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.79  E-value=1.4e-18  Score=111.59  Aligned_cols=105  Identities=21%  Similarity=0.356  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +++.+|+|.+....          ...|+..+.++.+|||++++++.+..++..+++|||+ +++|.+.+.....++...
T Consensus        27 ~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  106 (288)
T cd05583          27 AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESE  106 (288)
T ss_pred             CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHH
Confidence            46789999885421          1236667777767999999999999999999999999 889999987767799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.++.|+|+.+++|+|++|+||+++.++
T Consensus       107 ~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~  142 (288)
T cd05583         107 VRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG  142 (288)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence            999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.79  E-value=4.1e-18  Score=111.72  Aligned_cols=103  Identities=19%  Similarity=0.280  Sum_probs=85.8

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-----------
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-----------   64 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-----------   64 (114)
                      ..+|+|.+....       ...|+..+.++.+|||++++++++...+..++++||+ +++|.+++....           
T Consensus        45 ~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  124 (334)
T cd05100          45 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTC  124 (334)
T ss_pred             eeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccc
Confidence            368999876432       2246667777768999999999999999999999999 889999986422           


Q ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 -----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 -----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                           .++......++.|++.|+.|+|.+|++|+|++|+||+++.++
T Consensus       125 ~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~  171 (334)
T cd05100         125 KLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             cCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence                 367788888999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.79  E-value=6.3e-18  Score=110.17  Aligned_cols=104  Identities=20%  Similarity=0.304  Sum_probs=87.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~   71 (114)
                      +|+.+|+|.+....         ..+|+..+.++ +|||++++++++..++..+++|||+.+++.+.+.. ...+++...
T Consensus        49 ~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~  127 (317)
T cd06635          49 TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI  127 (317)
T ss_pred             CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHH
Confidence            57889999986432         11356666666 99999999999999999999999997788877754 456899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|.++++|+|++|+||+++.++
T Consensus       128 ~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~  162 (317)
T cd06635         128 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG  162 (317)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC
Confidence            99999999999999999999999999999997654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0574|consensus

Probab=99.79  E-value=3.8e-19  Score=113.83  Aligned_cols=105  Identities=16%  Similarity=0.249  Sum_probs=93.8

Q ss_pred             CCcEEEEEEeccccch----hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG----NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~~~----~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      ||..+|+|.+..+...    +|+.++.++ +.|+++++|+.|.....+|+||||| .|++.++++. +..+++..+..++
T Consensus        57 sG~v~AIK~VPV~sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL  135 (502)
T KOG0574|consen   57 SGHVLAIKKVPVDTDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVL  135 (502)
T ss_pred             cCcEEEEEecCccchHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHH
Confidence            7899999999776533    467788888 9999999999999888999999999 8999999974 5679999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ...+.|++|||...-+|||+|..|||++.++.
T Consensus       136 ~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~  167 (502)
T KOG0574|consen  136 RDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI  167 (502)
T ss_pred             HHHHhHHHHHHHHHHHHhhcccccEEEcccch
Confidence            99999999999999999999999999977664

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.79  E-value=5.1e-18  Score=110.08  Aligned_cols=104  Identities=20%  Similarity=0.282  Sum_probs=88.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ..+|+..+..+ +|||++++++++..++..++++|++.+++.+.+.. ...+++..+
T Consensus        39 ~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~  117 (307)
T cd06607          39 TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEI  117 (307)
T ss_pred             CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHH
Confidence            57899999885322         12356666777 99999999999999999999999998888777753 456899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~  152 (307)
T cd06607         118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG  152 (307)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC
Confidence            99999999999999999999999999999997654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.79  E-value=3.1e-18  Score=110.04  Aligned_cols=104  Identities=25%  Similarity=0.298  Sum_probs=87.2

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      ++..+|+|.+.....       ..|+..+.++ +|||++++++++...+..++++|++ +++|.+++....         
T Consensus        34 ~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  112 (288)
T cd05050          34 PFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSH  112 (288)
T ss_pred             cceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccc
Confidence            467899998865432       2356667777 9999999999999999999999999 789999986421         


Q ss_pred             -------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 -------------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 -------------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                                   .++......++.|++.|+.|+|.++++|+|++|+||+++.++
T Consensus       113 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~  167 (288)
T cd05050         113 STSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENM  167 (288)
T ss_pred             cccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCC
Confidence                         367788899999999999999999999999999999996654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=4.2e-18  Score=108.28  Aligned_cols=105  Identities=21%  Similarity=0.368  Sum_probs=88.1

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCC-CCCHHHHHHh----CCC
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPC-SGDLHSYVRQ----RKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~-~~~l~~~~~~----~~~   65 (114)
                      +++.+|+|.+....     ...|+..+.++.+|+|++++++++....      .++++||++ +++|.+++..    ...
T Consensus        30 ~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  109 (275)
T cd06608          30 TGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKR  109 (275)
T ss_pred             CCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCC
Confidence            56889999986543     2346777777768999999999997544      589999999 7899888754    346


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++...+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       110 ~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~  150 (275)
T cd06608         110 LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA  150 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC
Confidence            89999999999999999999999999999999999997654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.79  E-value=3e-18  Score=110.83  Aligned_cols=104  Identities=20%  Similarity=0.296  Sum_probs=86.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC--------EEEEEecCCCCCHHHHHHhC-C
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK--------LAYLVFPPCSGDLHSYVRQR-K   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~--------~~~~v~e~~~~~l~~~~~~~-~   64 (114)
                      +|+.||+|.+....        ..+|+..+.++ +|||++++++++....        ..++++|++++++.+.+... .
T Consensus        36 ~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~  114 (310)
T cd07865          36 TKQIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNV  114 (310)
T ss_pred             CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhccc
Confidence            58899999885432        12467777777 9999999999986543        46999999988888887653 3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++...+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       115 ~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~  156 (310)
T cd07865         115 KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG  156 (310)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC
Confidence            689999999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.79  E-value=2.9e-18  Score=111.66  Aligned_cols=100  Identities=21%  Similarity=0.228  Sum_probs=82.5

Q ss_pred             EEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .||+|.+.....       ..|+..+..+ +|||++++++++... ..++++|++ +|++.+++... ..++......++
T Consensus        38 ~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~  115 (316)
T cd05108          38 PVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  115 (316)
T ss_pred             eEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHH
Confidence            489999864322       1355566666 999999999998765 467899999 89999998764 458889999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|||+++++||||||+||+++.++
T Consensus       116 ~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~  146 (316)
T cd05108         116 VQIAKGMNYLEERRLVHRDLAARNVLVKTPQ  146 (316)
T ss_pred             HHHHHHHHHHHhcCeeccccchhheEecCCC
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.79  E-value=3.4e-18  Score=110.38  Aligned_cols=103  Identities=18%  Similarity=0.271  Sum_probs=87.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.+|+|.+....      ..+|+..+..+ +|+|++++++.|..++..+++||++ +++|.+++. .+.+++.....+
T Consensus        44 ~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~  121 (292)
T cd06657          44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAV  121 (292)
T ss_pred             CCeEEEEEEecccchhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHH
Confidence            57889999875432      22356666666 9999999999999999999999999 788888764 356899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.++.|+|++|++|+|++|+||+++.++
T Consensus       122 ~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~  153 (292)
T cd06657         122 CLAVLKALSVLHAQGVIHRDIKSDSILLTHDG  153 (292)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.79  E-value=3e-18  Score=112.87  Aligned_cols=105  Identities=17%  Similarity=0.223  Sum_probs=84.7

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC---------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR---------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~---------   63 (114)
                      +++.||+|.+....       ..+|+..+.++.+|||++++++++.. +...+++|||+ +|+|.+++...         
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~  115 (343)
T cd05103          36 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKT  115 (343)
T ss_pred             cceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccc
Confidence            46789999986532       22467777777678999999998764 45689999999 89999887532         


Q ss_pred             ----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHH
Q psy14425         64 ----------------------------------------------------------KRLKEAEARKLFRQIAETVRAC   85 (114)
Q Consensus        64 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~l~~l   85 (114)
                                                                                ..++......++.|++.|+.|+
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l  195 (343)
T cd05103         116 KDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFL  195 (343)
T ss_pred             cccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence                                                                      1256677788999999999999


Q ss_pred             HHCCCccCCCCCCcEEEecCC
Q psy14425         86 HAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        86 h~~~i~h~~lk~~nil~~~~~  106 (114)
                      |+++++||||||+||+++.++
T Consensus       196 H~~~i~H~dikp~Nil~~~~~  216 (343)
T cd05103         196 ASRKCIHRDLAARNILLSENN  216 (343)
T ss_pred             HhCCeecCCCccCeEEEcCCC
Confidence            999999999999999997544

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=3.6e-18  Score=123.46  Aligned_cols=104  Identities=18%  Similarity=0.316  Sum_probs=86.2

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      +++.+|+|.+....        ...|+.++.++ +||||++++++|..  ...+|++|||+ +++|.+++..    .+.+
T Consensus        37 tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L  115 (1021)
T PTZ00266         37 TQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKI  115 (1021)
T ss_pred             CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCC
Confidence            56788999886432        22367777777 99999999999854  46799999999 8899998864    2469


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC-------CCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQ-------GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~-------~i~h~~lk~~nil~~~~~  106 (114)
                      ++..++.++.|++.||.|||..       +++|+||||+|||++.+.
T Consensus       116 ~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~  162 (1021)
T PTZ00266        116 EEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI  162 (1021)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence            9999999999999999999984       499999999999997643

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.79  E-value=6.8e-19  Score=115.39  Aligned_cols=104  Identities=20%  Similarity=0.306  Sum_probs=88.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEE----cCCEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLL----GDKLAYLVFPPCSGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~----~~~~~~~v~e~~~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.||+|.+....        ...|+..+.++ +|||+++++++|.    ....+++++||+++++.+++.....++..
T Consensus        29 ~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~  107 (334)
T cd07855          29 SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEE  107 (334)
T ss_pred             CCCEEEEEEeccccccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCCCCCHH
Confidence            68899999986532        12367777777 8999999999886    34578999999977899988776779999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       108 ~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~  144 (334)
T cd07855         108 HIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC  144 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999999997755

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.79  E-value=6.7e-19  Score=112.28  Aligned_cols=106  Identities=23%  Similarity=0.322  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+....         ...|..++.++.+|||++++++++..++..+++||++ +++|.+++...+.++....
T Consensus        25 ~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~  104 (280)
T cd05581          25 TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCT  104 (280)
T ss_pred             CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence            68899999986532         1234566667734999999999999999999999999 9999999988778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.++|+.+++|+|++|+||+++.++.
T Consensus       105 ~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~  140 (280)
T cd05581         105 RFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH  140 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC
Confidence            999999999999999999999999999999976553

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.79  E-value=4.7e-18  Score=107.09  Aligned_cols=103  Identities=17%  Similarity=0.246  Sum_probs=88.3

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      ++.+|+|.+.....       .+|+..+.++ +|+|++++++++...+..++++|++ +++|.+++.. ...++......
T Consensus        19 ~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~   97 (251)
T cd05041          19 NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQ   97 (251)
T ss_pred             CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHH
Confidence            67899998865432       2366666766 9999999999999999999999999 8899999865 34588899999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.+++.++.|+|+++++|+|++|+||+++.++
T Consensus        98 ~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~  130 (251)
T cd05041          98 MSLDAAAGMEYLESKNCIHRDLAARNCLVGENN  130 (251)
T ss_pred             HHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC
Confidence            999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.79  E-value=4.8e-18  Score=108.30  Aligned_cols=101  Identities=26%  Similarity=0.302  Sum_probs=81.2

Q ss_pred             EEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----CCCCHHHHH
Q psy14425          5 VVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----KRLKEAEAR   72 (114)
Q Consensus         5 ~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----~~~~~~~~~   72 (114)
                      .+++|.+......       +|...+..+ +|||++++++.+......+++|||+ +++|.+++...    ...+...+.
T Consensus        24 ~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  102 (268)
T cd05086          24 RVVVKELKANASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ  102 (268)
T ss_pred             eEEEEEecCCCChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHH
Confidence            4556665543221       234445555 9999999999999999999999999 88999988643    236677788


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       103 ~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~  136 (268)
T cd05086         103 RMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL  136 (268)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc
Confidence            8999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PTZ00284 protein kinase; Provisional

Probab=99.79  E-value=3.9e-18  Score=116.34  Aligned_cols=105  Identities=9%  Similarity=0.121  Sum_probs=84.6

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhh-----CCCCCcceEEEEEEcC-CEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRL-----DSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~-----~~h~~i~~~~~~~~~~-~~~~~v~e~~~~~l~~~~~~~~~~~~~~   70 (114)
                      +++.||||+++...     ...|+..+..+     .+|.+++.++++|... +.++++|++++++|.+++...+.+++..
T Consensus       153 ~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~  232 (467)
T PTZ00284        153 RKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHRH  232 (467)
T ss_pred             CCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcCCCCHHH
Confidence            57889999985421     12344444433     2455688999988754 5799999999999999988778899999


Q ss_pred             HHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|||. .|++||||||+|||++.++
T Consensus       233 ~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~  269 (467)
T PTZ00284        233 LAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD  269 (467)
T ss_pred             HHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCC
Confidence            99999999999999998 5999999999999997654

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.79  E-value=2.2e-18  Score=108.80  Aligned_cols=104  Identities=18%  Similarity=0.321  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~   70 (114)
                      +|..+|+|.+....        ..+|+..+.++ +|+|++++++.+...+..++++|++ +++|.+++....  .+++..
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  102 (257)
T cd08225          24 DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQ  102 (257)
T ss_pred             CCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHH
Confidence            47789999985431        22466777777 9999999999999999999999999 889999886533  478999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       103 ~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~  138 (257)
T cd08225         103 ILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG  138 (257)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC
Confidence            999999999999999999999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.79  E-value=3.2e-18  Score=110.55  Aligned_cols=102  Identities=17%  Similarity=0.270  Sum_probs=85.1

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC------------
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK------------   64 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~------------   64 (114)
                      .+|+|.++...       ...|+..+.++.+|||++++++++...+.+++++|++ +++|.+++....            
T Consensus        31 ~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  110 (297)
T cd05089          31 NAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEH  110 (297)
T ss_pred             eeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhcccccccccccccc
Confidence            46777775321       2246777777768999999999999999999999999 889999986432            


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                          .++......++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       111 ~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  156 (297)
T cd05089         111 GTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL  156 (297)
T ss_pred             CccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence                378889999999999999999999999999999999996654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.79  E-value=1.8e-18  Score=111.01  Aligned_cols=104  Identities=13%  Similarity=0.194  Sum_probs=88.6

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC---CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR---KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~---~~~~~~~   70 (114)
                      +|+.+|+|.+....       ..+|+..+.++ +|||++++++.+...+..++++||+ +++|..++...   ..+++..
T Consensus        25 ~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~  103 (286)
T cd06622          25 TGVTMAMKEIRLELDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDV  103 (286)
T ss_pred             CCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHH
Confidence            57899999886432       22366677776 9999999999999999999999999 88998888653   3689999


Q ss_pred             HHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|||. .+++|+||+|+||+++.++
T Consensus       104 ~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~  140 (286)
T cd06622         104 LRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG  140 (286)
T ss_pred             HHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC
Confidence            99999999999999997 5999999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.79  E-value=2.8e-18  Score=113.71  Aligned_cols=102  Identities=22%  Similarity=0.249  Sum_probs=83.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +++.+|+|.+....        ..+|+..+..+ +|||++++++++...      ..++++||++.+++.+.+..  .++
T Consensus        48 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~  124 (364)
T cd07875          48 LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELD  124 (364)
T ss_pred             CCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-CCCCccccceeecccccccccCeEEEEEeCCCCCHHHHHHh--cCC
Confidence            57889999986432        11355566666 999999999988643      35899999997788877743  478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       125 ~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  163 (364)
T cd07875         125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  163 (364)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence            888999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.79  E-value=2.6e-18  Score=108.93  Aligned_cols=104  Identities=14%  Similarity=0.192  Sum_probs=90.4

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +++.+|+|.+.....       ..|+..+.++ +|||++++++.+...+..++++|++ +++|.+++... ..++.....
T Consensus        25 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  103 (265)
T cd06605          25 TGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILG  103 (265)
T ss_pred             CCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHH
Confidence            578899998865532       2356666776 7999999999999999999999999 68999999765 678999999


Q ss_pred             HHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.|+|+ .+++|+|++|+||++++++
T Consensus       104 ~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~  138 (265)
T cd06605         104 KIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG  138 (265)
T ss_pred             HHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC
Confidence            999999999999999 9999999999999997754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.79  E-value=7.1e-18  Score=108.51  Aligned_cols=105  Identities=18%  Similarity=0.293  Sum_probs=87.3

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      +|+.+|+|.+....     ...|+..+.++.+|||++++++++...     +..++++||+ +++|.+++..    ...+
T Consensus        46 ~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~  125 (291)
T cd06639          46 DGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRL  125 (291)
T ss_pred             CCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCC
Confidence            57889999986432     224666777776899999999998743     4689999999 8899988752    3468


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++..++.++.|++.|+.|+|..+++|+|++|+||+++.++
T Consensus       126 ~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~  165 (291)
T cd06639         126 DEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG  165 (291)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence            9999999999999999999999999999999999997655

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.79  E-value=4.2e-18  Score=109.57  Aligned_cols=102  Identities=20%  Similarity=0.286  Sum_probs=85.6

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC------------
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR------------   63 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~------------   63 (114)
                      ..+|+|.+....       ...|+..+.++ +||||+++++.+...+..++++||+ +++|.+++...            
T Consensus        31 ~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  109 (290)
T cd05045          31 TTVAVKMLKENASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDG  109 (290)
T ss_pred             eeEEEEecCCCCCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCcccccccccc
Confidence            468888876443       22467777777 9999999999999999999999999 89999987532            


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ------------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ------------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                                  ..++...+..++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       110 ~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~  164 (290)
T cd05045         110 NRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR  164 (290)
T ss_pred             ccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCC
Confidence                        2367888899999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.78  E-value=2.2e-18  Score=110.46  Aligned_cols=104  Identities=20%  Similarity=0.301  Sum_probs=86.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||+|.+....        ...|+..+.++ +|+|++++++++..++..++++|++ ++.+..+......++.....
T Consensus        25 ~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~  103 (288)
T cd07833          25 TGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVR  103 (288)
T ss_pred             CCcEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHH
Confidence            57889999885421        22467777777 8999999999999999999999999 44444444455668999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       104 ~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~  137 (288)
T cd07833         104 SYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG  137 (288)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            9999999999999999999999999999997644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.78  E-value=6.7e-18  Score=107.38  Aligned_cols=101  Identities=21%  Similarity=0.229  Sum_probs=86.7

Q ss_pred             EEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .+|+|.+.....       ..|+..+.++ +|||++++.+++...+..+++||++ +++|.+++... +.+++.....++
T Consensus        35 ~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  113 (268)
T cd05063          35 AVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML  113 (268)
T ss_pred             EEEEEeccccCCHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            689998865422       2356666666 9999999999999999999999999 88999998653 568999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+.+++|+|++|+||++++++
T Consensus       114 ~~l~~al~~lH~~~i~H~dlkp~Nili~~~~  144 (268)
T cd05063         114 RGIAAGMKYLSDMNYVHRDLAARNILVNSNL  144 (268)
T ss_pred             HHHHHHHHHHHHCCeeccccchhhEEEcCCC
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.78  E-value=5.6e-18  Score=108.53  Aligned_cols=103  Identities=24%  Similarity=0.394  Sum_probs=84.9

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      ++.+|+|.++.....       .|...+.++ +||||+++++++...+..++++|++ +++|.+++...           
T Consensus        35 ~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~  113 (283)
T cd05091          35 TQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDD  113 (283)
T ss_pred             eeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCcccccccc
Confidence            467999998644322       245455555 9999999999999999999999999 88999887421           


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                           ..++...+..++.|++.|+.|+|++|++|||+||+||++++++
T Consensus       114 ~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~  161 (283)
T cd05091         114 DKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL  161 (283)
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence                 2377888899999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1152|consensus

Probab=99.78  E-value=6.1e-19  Score=120.08  Aligned_cols=103  Identities=25%  Similarity=0.375  Sum_probs=91.1

Q ss_pred             CcEEEEEEeccccch--------------hHHHHHhhhCC---CCCcceEEEEEEcCCEEEEEecCC--CCCHHHHHHhC
Q psy14425          3 GIVVVLEIMSREASG--------------NLLSAHYRLDS---HPHINSLHEVLLGDKLAYLVFPPC--SGDLHSYVRQR   63 (114)
Q Consensus         3 ~~~~avK~~~~~~~~--------------~e~~~~~~~~~---h~~i~~~~~~~~~~~~~~~v~e~~--~~~l~~~~~~~   63 (114)
                      ...|++|.+.++...              .|+.++.++ +   |+||+++.++|++++++|+.||..  +-+|.+++...
T Consensus       586 ~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k  664 (772)
T KOG1152|consen  586 NYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK  664 (772)
T ss_pred             ceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc
Confidence            356889988765421              278888887 5   899999999999999999999998  56999999888


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+++++.++.+++|++.|+.+||+.|++|||||-+|+.++.++
T Consensus       665 p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g  707 (772)
T KOG1152|consen  665 PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG  707 (772)
T ss_pred             CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence            8999999999999999999999999999999999999997654

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.78  E-value=1e-17  Score=106.22  Aligned_cols=104  Identities=17%  Similarity=0.272  Sum_probs=88.9

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC---CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR---KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~---~~~~~~~   70 (114)
                      ++..+|+|.+....       ...|+..+..+ +|+|++++++.+...+..++++|++ ++++.+++...   ..+++..
T Consensus        25 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~  103 (267)
T cd06610          25 NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAI  103 (267)
T ss_pred             CCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHH
Confidence            46789999986432       22356666666 9999999999999999999999999 88999998653   3589999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.++|++|++|+|++|+||++++++
T Consensus       104 ~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~  139 (267)
T cd06610         104 IATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG  139 (267)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC
Confidence            999999999999999999999999999999997654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.78  E-value=3.7e-18  Score=112.74  Aligned_cols=102  Identities=24%  Similarity=0.282  Sum_probs=85.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.+|+|.+.+..        ...|+..+.++ +|||+++++++|...      ...+++||++.+++.+.+...  ++
T Consensus        40 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--l~  116 (353)
T cd07850          40 TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--LD  116 (353)
T ss_pred             CCCEEEEEecCccccChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--CC
Confidence            68899999986421        11366667766 999999999998643      357999999988888887543  88


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       117 ~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~  155 (353)
T cd07850         117 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  155 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            899999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.78  E-value=2.4e-18  Score=105.20  Aligned_cols=88  Identities=19%  Similarity=0.229  Sum_probs=63.8

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHCCCccCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRAC-HAQGIVLRDLK   96 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-h~~~i~h~~lk   96 (114)
                      |...+.++ .++++..........  .+++||++ ++++.......+.++...+..++.|++.++.++ |+.|++|||+|
T Consensus        69 E~~~l~~l-~~~~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlk  145 (190)
T cd05147          69 EMRNLKRL-VTAGIPCPEPILLKS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLS  145 (190)
T ss_pred             HHHHHHHH-HHCCCCCCcEEEecC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            56666666 556554333222222  37999999 555544433446789999999999999999999 69999999999


Q ss_pred             CCcEEEecCCccc
Q psy14425         97 LRKFVFCNAQRSV  109 (114)
Q Consensus        97 ~~nil~~~~~~~~  109 (114)
                      |+||+++++...+
T Consensus       146 P~NIli~~~~v~L  158 (190)
T cd05147         146 EYNLLYHDGKLYI  158 (190)
T ss_pred             HHHEEEECCcEEE
Confidence            9999998644333

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.78  E-value=5e-18  Score=107.62  Aligned_cols=103  Identities=17%  Similarity=0.236  Sum_probs=86.5

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      +++.+|+|.+....     ...|+..+.++ +|+|++++++++. .+..++++|++ +++|.+.+...  ..++......
T Consensus        29 ~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~  106 (260)
T cd05067          29 GHTKVAIKSLKQGSMSPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLID  106 (260)
T ss_pred             CCceEEEEEecCCCCcHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHH
Confidence            46789999886543     23467777777 9999999998874 56789999999 88999988643  3588999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+.|++|+|++|+|++++.++
T Consensus       107 i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~  139 (260)
T cd05067         107 MAAQIAEGMAFIERKNYIHRDLRAANILVSETL  139 (260)
T ss_pred             HHHHHHHHHHHHhcCCeecccccHHhEEEcCCC
Confidence            999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.78  E-value=2.7e-18  Score=109.16  Aligned_cols=102  Identities=23%  Similarity=0.273  Sum_probs=85.7

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-------CCCCH
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-------KRLKE   68 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-------~~~~~   68 (114)
                      +.+|+|.+....       ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++...       ..++.
T Consensus        27 ~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~  105 (269)
T cd05044          27 IRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTL  105 (269)
T ss_pred             eeehhhhhhcccchhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccH
Confidence            578888875432       12356666666 9999999999999999999999999 88999988532       23778


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       106 ~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~  143 (269)
T cd05044         106 KELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKG  143 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCC
Confidence            88999999999999999999999999999999998755

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.78  E-value=1.1e-17  Score=105.62  Aligned_cols=103  Identities=20%  Similarity=0.256  Sum_probs=88.9

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      ++.+|+|.+....     ...|+..+.++ +|||++++++++......++++|++ +++|.+++... +.+++..+..++
T Consensus        28 ~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  106 (256)
T cd05112          28 KRKVAIKTIREGAMSEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMC  106 (256)
T ss_pred             CCeEEEEECCCCCCCHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence            5678999886543     23477777777 9999999999999999999999999 88999988653 458899999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.++.++|+++++|+|++|+||+++.++
T Consensus       107 ~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~  137 (256)
T cd05112         107 LDVCEGMAYLESSNVIHRDLAARNCLVGENQ  137 (256)
T ss_pred             HHHHHHHHHHHHCCccccccccceEEEcCCC
Confidence            9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.78  E-value=8.7e-18  Score=105.78  Aligned_cols=104  Identities=21%  Similarity=0.301  Sum_probs=90.0

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----CCCCH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----KRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----~~~~~   68 (114)
                      ++..+|+|.+.....        ..|+..+..+ +|||++++.+.+..++..++++|++ +++|.+.+...    ..++.
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  102 (258)
T cd08215          24 DGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPE  102 (258)
T ss_pred             CCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCH
Confidence            578999999865432        2356666777 8999999999999999999999999 78999988653    56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .....++.+++.|+.++|++|++|+|++|+||++++++
T Consensus       103 ~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~  140 (258)
T cd08215         103 EQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG  140 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC
Confidence            99999999999999999999999999999999997643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.78  E-value=5.6e-18  Score=107.75  Aligned_cols=104  Identities=19%  Similarity=0.277  Sum_probs=84.3

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCC-CCCHHHHHHhC---
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPC-SGDLHSYVRQR---   63 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~-~~~l~~~~~~~---   63 (114)
                      ++..+|+|.+..+..        ..|+..+..+ +|||++++++++....      ..++++||+ +++|..++...   
T Consensus        26 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~  104 (273)
T cd05035          26 SQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLG  104 (273)
T ss_pred             CcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhcc
Confidence            357799999865421        1356666666 9999999999876544      389999999 88999887432   


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ---KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ---~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         ..++......++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       105 ~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~  150 (273)
T cd05035         105 GLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDM  150 (273)
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCC
Confidence               2488999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.78  E-value=9.8e-18  Score=105.08  Aligned_cols=104  Identities=19%  Similarity=0.366  Sum_probs=90.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +|+.+++|.+....      ..+|+..+.++ +|++++++.+++...+..++++|++ +++|.+++... ..++......
T Consensus        24 ~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~  102 (253)
T cd05122          24 TGKEVAIKVIKLESKEKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAY  102 (253)
T ss_pred             CCcEEEEEEecccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHH
Confidence            57889999986654      22466667777 8999999999999999999999999 78999998765 5789999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.++.++|.+|++|+|++|+||++++++
T Consensus       103 i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~  135 (253)
T cd05122         103 VCKELLKGLEYLHSNGIIHRDIKAANILLTSDG  135 (253)
T ss_pred             HHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC
Confidence            999999999999999999999999999997654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=4.7e-18  Score=116.79  Aligned_cols=104  Identities=22%  Similarity=0.351  Sum_probs=84.9

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCC--------EEEEEecCC-CCCHHHHHHhC-
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDK--------LAYLVFPPC-SGDLHSYVRQR-   63 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~--------~~~~v~e~~-~~~l~~~~~~~-   63 (114)
                      +|+.||+|.+.....        ..|+..+..+ +|+|++++++.+...+        .++++|||+ +|+|.+.+... 
T Consensus        56 ~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~  134 (496)
T PTZ00283         56 DGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRA  134 (496)
T ss_pred             CCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhh
Confidence            688999999865421        1355556666 9999999988875332        478999999 89999988542 


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ---KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ---~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         ..+++..+..++.|++.|+.|+|+++++||||||+||+++.++
T Consensus       135 ~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~  180 (496)
T PTZ00283        135 KTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG  180 (496)
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC
Confidence               3589999999999999999999999999999999999997654

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.78  E-value=4.8e-18  Score=108.66  Aligned_cols=104  Identities=24%  Similarity=0.384  Sum_probs=89.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCCCCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~~~~l~~~~~~~-~~~~~~~   70 (114)
                      +|+.+|+|.+....        ...|+..+.++ +|||++++++++...  +..++++|++.+++.+++... ..+++..
T Consensus        23 ~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~  101 (287)
T cd07840          23 TGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQ  101 (287)
T ss_pred             CCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHH
Confidence            47889999997552        22366667777 899999999999887  899999999977999888654 5699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.++|.++++|+|++|+||++++++
T Consensus       102 ~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~  137 (287)
T cd07840         102 IKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG  137 (287)
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.78  E-value=4.1e-18  Score=109.98  Aligned_cols=103  Identities=17%  Similarity=0.249  Sum_probs=87.8

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +++.+|+|.+.....      ..|+..+.++ +|||++++++.+...+..++++|++ +++|.+++.+ ..++...+..+
T Consensus        43 ~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i  120 (293)
T cd06647          43 TGQEVAIKQMNLQQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  120 (293)
T ss_pred             CCCEEEEEEeccccchHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHH
Confidence            567899999854321      2356666666 8999999999999999999999999 8899998865 45788899999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       121 ~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~  152 (293)
T cd06647         121 CRECLQALEFLHSNQVIHRDIKSDNILLGMDG  152 (293)
T ss_pred             HHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC
Confidence            99999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.78  E-value=1.3e-17  Score=108.57  Aligned_cols=104  Identities=20%  Similarity=0.298  Sum_probs=88.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~   71 (114)
                      +|+.+|+|.+....         ..+|+..+.++ +|||++++++++..++..+++||++.+++.+.+.. ...+++...
T Consensus        45 ~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~  123 (313)
T cd06633          45 TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEI  123 (313)
T ss_pred             CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHH
Confidence            57889999986432         12356666666 99999999999999999999999997788887754 356899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.++.|+|++|++|+|++|+||+++.++
T Consensus       124 ~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~  158 (313)
T cd06633         124 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG  158 (313)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC
Confidence            99999999999999999999999999999997654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1094|consensus

Probab=99.78  E-value=7.2e-19  Score=119.95  Aligned_cols=106  Identities=22%  Similarity=0.271  Sum_probs=90.5

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHH
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~   72 (114)
                      +.+||+|.+..+.       ..+|++.+.++ +||||+.++++|..++.+++++||+ .|+|.+++.+..  .+......
T Consensus       562 ~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~v  640 (807)
T KOG1094|consen  562 PLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGV  640 (807)
T ss_pred             ceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhH
Confidence            4789999996554       33589999999 9999999999999999999999999 999999997652  23455566


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSV  109 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~  109 (114)
                      .++.|++.||.||.+.+++|||+.+.|+|++.+. .++
T Consensus       641 si~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKi  678 (807)
T KOG1094|consen  641 SICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKI  678 (807)
T ss_pred             HHHHHHHHHHHHHHhhchhhccccccceeecCcccEEe
Confidence            7999999999999999999999999999996644 344

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.78  E-value=9.8e-18  Score=106.28  Aligned_cols=103  Identities=16%  Similarity=0.198  Sum_probs=86.4

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~~   74 (114)
                      +..+|+|.+....     ..+|+..+.++ +|+|++++++++. .+..+++||++ +++|.+++...  ..++......+
T Consensus        30 ~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  107 (260)
T cd05070          30 NTKVAVKTLKPGTMSPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDM  107 (260)
T ss_pred             CceeEEEEecCCCCCHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHH
Confidence            5678999886532     23577777777 9999999999875 45688999999 88999998653  34899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|+|+++++|+|++|+||++++++.
T Consensus       108 ~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~  140 (260)
T cd05070         108 AAQVAAGMAYIERMNYIHRDLRSANILVGDGLV  140 (260)
T ss_pred             HHHHHHHHHHHHHCCcccCCCccceEEEeCCce
Confidence            999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.78  E-value=6.3e-18  Score=111.31  Aligned_cols=103  Identities=25%  Similarity=0.331  Sum_probs=86.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||++++++|....      .+++++|++++++.+++.. ..++
T Consensus        39 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~  116 (343)
T cd07880          39 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH-EKLS  116 (343)
T ss_pred             CCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCccccccceEEEEEecCCCCHHHHHhc-CCCC
Confidence            57899999985432        22467777777 9999999999987543      4689999998899888754 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..+..++.|++.|+.|+|+.|++|+|++|+||++++++
T Consensus       117 ~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~  155 (343)
T cd07880         117 EDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC  155 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.77  E-value=3.1e-18  Score=112.47  Aligned_cols=104  Identities=15%  Similarity=0.296  Sum_probs=88.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|.+....        ...|+..+..+ +|+|++++++++...     ...++++|+++++|.+++...+.++.
T Consensus        29 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~  107 (337)
T cd07858          29 TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSD  107 (337)
T ss_pred             CCCeEEEEEecccccccchhHHHHHHHHHHHhc-CCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCCCCCH
Confidence            57899999885421        12366667776 999999999988644     35899999998899999887778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .....++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       108 ~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~  145 (337)
T cd07858         108 DHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC  145 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            99999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.77  E-value=1e-17  Score=107.26  Aligned_cols=105  Identities=19%  Similarity=0.332  Sum_probs=87.0

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEE------cCCEEEEEecCC-CCCHHHHHHhC--CCCC
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLL------GDKLAYLVFPPC-SGDLHSYVRQR--KRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~------~~~~~~~v~e~~-~~~l~~~~~~~--~~~~   67 (114)
                      +++.+|+|.+....     ...|+..+.++.+|+|++++++++.      ..+..+++|||+ +++|.+++...  ..++
T Consensus        40 ~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~  119 (282)
T cd06636          40 TGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALK  119 (282)
T ss_pred             CCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCC
Confidence            57889999886542     2235666777768999999999985      246799999999 78999988653  3488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..+..++.|++.|+.|+|+.+++|+|++|+||++++++
T Consensus       120 ~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~  158 (282)
T cd06636         120 EDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA  158 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            888999999999999999999999999999999997655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=1.8e-17  Score=106.10  Aligned_cols=100  Identities=23%  Similarity=0.274  Sum_probs=85.2

Q ss_pred             EEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .+|+|.......       .+|+..+.++ +|||++++++++.+ ...++++|++ +++|.+.+... ..+++.....++
T Consensus        38 ~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  115 (279)
T cd05057          38 PVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC  115 (279)
T ss_pred             EEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHH
Confidence            588998765432       2366677777 99999999999887 7889999999 89999998763 458999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       116 ~qi~~~l~~LH~~~i~H~di~p~nil~~~~~  146 (279)
T cd05057         116 VQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ  146 (279)
T ss_pred             HHHHHHHHHHHhCCEEecccCcceEEEcCCC
Confidence            9999999999999999999999999996654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.77  E-value=7.2e-18  Score=108.84  Aligned_cols=104  Identities=22%  Similarity=0.380  Sum_probs=87.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC----------EEEEEecCCCCCHHHHHHhC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK----------LAYLVFPPCSGDLHSYVRQR   63 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~----------~~~~v~e~~~~~l~~~~~~~   63 (114)
                      +|+.||+|.+....        ...|+..+.++ +|||++++++++.+..          .+++++|++++++...+...
T Consensus        31 ~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~  109 (302)
T cd07864          31 TGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESG  109 (302)
T ss_pred             CCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcC
Confidence            57889999986432        12466777777 9999999999987654          79999999977888777653


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                       ..++...+..++.|++.|+.|||+++++|+|++|+||++++.+
T Consensus       110 ~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~  153 (302)
T cd07864         110 LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG  153 (302)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence             4689999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.77  E-value=4.5e-18  Score=124.15  Aligned_cols=102  Identities=23%  Similarity=0.325  Sum_probs=88.2

Q ss_pred             CCcEEEEEEecccc--chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA--SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQI   78 (114)
Q Consensus         2 t~~~~avK~~~~~~--~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (114)
                      +|..||+|.+....  ...++..+.++ +||||+++++++.+.+..++||||+ +++|.+++..   +++.....++.|+
T Consensus       714 ~~~~vavK~~~~~~~~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~i  789 (968)
T PLN00113        714 NGMQFVVKEINDVNSIPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGI  789 (968)
T ss_pred             CCcEEEEEEccCCccccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHH
Confidence            57889999986433  33467777777 9999999999999999999999999 8999999853   8888999999999


Q ss_pred             HHHHHHHH---HCCCccCCCCCCcEEEecCCc
Q psy14425         79 AETVRACH---AQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        79 ~~~l~~lh---~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|+.|+|   +.+++|||+||+||+++.+..
T Consensus       790 a~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~  821 (968)
T PLN00113        790 AKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE  821 (968)
T ss_pred             HHHHHHhccCCCCCeecCCCCHHhEEECCCCc
Confidence            99999999   669999999999999976543

>KOG1026|consensus

Probab=99.77  E-value=1.7e-18  Score=121.21  Aligned_cols=108  Identities=23%  Similarity=0.284  Sum_probs=90.8

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      ...||||.++...       .++|++.+..+ +|||||++++++..++.+++|+||| .|||.++++...          
T Consensus       516 ~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~  594 (774)
T KOG1026|consen  516 EQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQ  594 (774)
T ss_pred             ceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCC
Confidence            3578999986543       23477777777 9999999999999999999999999 999999996422          


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         65 ----RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        65 ----~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                          .++..+...++.||+.||.||-++.++||||..+|+|+.++. .+++|
T Consensus       595 ~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsD  646 (774)
T KOG1026|consen  595 DTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISD  646 (774)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecc
Confidence                167888999999999999999999999999999999996654 34544

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.77  E-value=3.8e-18  Score=109.15  Aligned_cols=105  Identities=26%  Similarity=0.423  Sum_probs=89.6

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC--CCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK--RLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~--~~~~~~~~   72 (114)
                      +++.+|+|.+.....       .+|+..+.++.+|+|++++++++..++..+++||++++++.+.+....  .+++..+.
T Consensus        23 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  102 (283)
T cd07830          23 TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIR  102 (283)
T ss_pred             CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHH
Confidence            578899998865421       236666777744999999999999999999999999889998887654  68999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.++.|+|+++++|+|++|+||+++..+
T Consensus       103 ~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~  136 (283)
T cd07830         103 SIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE  136 (283)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence            9999999999999999999999999999997644

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.77  E-value=1.9e-17  Score=105.25  Aligned_cols=102  Identities=18%  Similarity=0.205  Sum_probs=84.9

Q ss_pred             cEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHHHH
Q psy14425          4 IVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~~~   75 (114)
                      ..+|+|.++...     ...|+..+.++ +|||++++++.+. .+..+++||++ +++|.+++.+.  ..++......++
T Consensus        31 ~~valK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~  108 (262)
T cd05071          31 TRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA  108 (262)
T ss_pred             ceEEEEecccCccCHHHHHHHHHHHHhC-CCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHH
Confidence            468999987532     23467777777 9999999998875 45679999999 78999998653  347889999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|++.|+.|+|+++++|+|++|+||++++++.
T Consensus       109 ~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~  140 (262)
T cd05071         109 AQIASGMAYVERMNYVHRDLRAANILVGENLV  140 (262)
T ss_pred             HHHHHHHHHHHHCCccccccCcccEEEcCCCc
Confidence            99999999999999999999999999977553

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0668|consensus

Probab=99.77  E-value=8e-19  Score=108.53  Aligned_cols=105  Identities=19%  Similarity=0.327  Sum_probs=88.3

Q ss_pred             CCcEEEEEEec---cccchhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMS---REASGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~---~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~   75 (114)
                      ++++++||+++   +....+|+.++..+.++|||++++++..++  ....+++|++ ..+..++-   ..++...+..++
T Consensus        62 ~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~  138 (338)
T KOG0668|consen   62 NNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYI  138 (338)
T ss_pred             CCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHH
Confidence            46788999885   344667999999998999999999998754  4578999999 55666554   337888899999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      .+++.|+.|+|++|++|||+||.|+|++...+++
T Consensus       139 ~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkL  172 (338)
T KOG0668|consen  139 YELLKALDYCHSMGIMHRDVKPHNVMIDHELRKL  172 (338)
T ss_pred             HHHHHHHhHHHhcCcccccCCcceeeechhhcee
Confidence            9999999999999999999999999998877654

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.77  E-value=1.2e-17  Score=109.48  Aligned_cols=104  Identities=19%  Similarity=0.210  Sum_probs=86.8

Q ss_pred             CcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCCCCCHHHHHHhCCCCCHHH
Q psy14425          3 GIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPCSGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         3 ~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~~~~l~~~~~~~~~~~~~~   70 (114)
                      +..||+|.+....        ...|+..+.++.+|||++++++.+..    ...+++++++++++|.+.+.....++...
T Consensus        27 ~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~  106 (332)
T cd07857          27 EETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAH  106 (332)
T ss_pred             CceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcCCCCCHHH
Confidence            7789999886421        12367777777679999999987542    25688999999889999987777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|+|.+|++|+|++|+||+++.++
T Consensus       107 ~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~  142 (332)
T cd07857         107 FQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC  142 (332)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC
Confidence            999999999999999999999999999999997655

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.77  E-value=5.2e-18  Score=108.34  Aligned_cols=104  Identities=27%  Similarity=0.450  Sum_probs=90.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +++.+|+|.+....        ...|+..+.++ +|+|++++++++...+..++++|+++++|.+++... ..++.....
T Consensus        23 ~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~  101 (282)
T cd07829          23 TGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIK  101 (282)
T ss_pred             CCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHH
Confidence            58899999987542        11356666766 899999999999999999999999977999999765 579999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.++|+++++|+|++|+||++++++
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~  135 (282)
T cd07829         102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG  135 (282)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC
Confidence            9999999999999999999999999999997744

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.77  E-value=2.2e-17  Score=105.70  Aligned_cols=100  Identities=21%  Similarity=0.243  Sum_probs=82.3

Q ss_pred             EEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .||+|.+......       +|...+..+ +|||++++++++... ..++++|++ +|++.+.+... +.++......++
T Consensus        38 ~va~K~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~  115 (279)
T cd05109          38 PVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWC  115 (279)
T ss_pred             EEEEEEecCCCCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHH
Confidence            5899988643322       345555555 999999999998754 467899999 88999998763 468999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+||||+||++++++
T Consensus       116 ~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~  146 (279)
T cd05109         116 VQIAKGMSYLEEVRLVHRDLAARNVLVKSPN  146 (279)
T ss_pred             HHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence            9999999999999999999999999996654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.77  E-value=1.1e-17  Score=105.53  Aligned_cols=104  Identities=25%  Similarity=0.332  Sum_probs=88.6

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCCH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~~   68 (114)
                      +|+.+|+|.+.....        ..|+..+.++ +|+|++++++++...+..++++|++ +++|.+++..    ...+++
T Consensus        24 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~  102 (256)
T cd08530          24 DNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPE  102 (256)
T ss_pred             CCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCH
Confidence            578899999865321        1355666667 8999999999999999999999999 8899998855    345889


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.++.|++.|+.++|++|++|+|++|+||++++++
T Consensus       103 ~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~  140 (256)
T cd08530         103 QEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC
Confidence            99999999999999999999999999999999997754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.77  E-value=1.2e-17  Score=109.58  Aligned_cols=104  Identities=26%  Similarity=0.354  Sum_probs=86.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPCSGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+....        ...|+..+.++.+|||+++++++|..  ....++++|++.++|..++... .+++...
T Consensus        31 ~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~  109 (337)
T cd07852          31 TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN-ILEDVHK  109 (337)
T ss_pred             CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccccCHHHHHhcC-CCCHHHH
Confidence            57889999874321        22366666666699999999999864  3468999999977999888664 7888899


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       110 ~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~  144 (337)
T cd07852         110 RYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC  144 (337)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            99999999999999999999999999999997765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.77  E-value=1.4e-17  Score=109.12  Aligned_cols=103  Identities=22%  Similarity=0.307  Sum_probs=86.0

Q ss_pred             CCcEEEEEEeccc--------cchhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSRE--------ASGNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.+|+|.+...        ....|+..+..+ +|||++++.++|.. ....++++|++++++.+++.. ..++.....
T Consensus        34 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~  111 (328)
T cd07856          34 TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTS-RPLEKQFIQ  111 (328)
T ss_pred             CCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhc-CCCCHHHHH
Confidence            6788999987532        122467777777 99999999999875 567899999998889888754 568888889


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|++|+|++++..+
T Consensus       112 ~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~  145 (328)
T cd07856         112 YFLYQILRGLKYVHSAGVVHRDLKPSNILINENC  145 (328)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC
Confidence            9999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.77  E-value=1.7e-17  Score=105.23  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=84.8

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~~   74 (114)
                      +..+|+|.+....     ...|+..+.++ +|+|++++++++. .+..+++||++ +++|.+++...  ..++......+
T Consensus        30 ~~~~~lK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  107 (260)
T cd05069          30 TTKVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDM  107 (260)
T ss_pred             CceEEEEEcccCCccHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHH
Confidence            3468999876432     23467777777 9999999998875 45688999999 78999998653  24788999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|+|++|++|+|++|+||++++++.
T Consensus       108 ~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~  140 (260)
T cd05069         108 AAQIADGMAYIERMNYIHRDLRAANILVGDNLV  140 (260)
T ss_pred             HHHHHHHHHHHHhCCEeecccCcceEEEcCCCe
Confidence            999999999999999999999999999976553

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.77  E-value=5.3e-18  Score=108.36  Aligned_cols=104  Identities=24%  Similarity=0.377  Sum_probs=89.7

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +|+.+|+|.+.....        ..|+..+.++ +|+|++++++++..++..++++|++.+++.+.+.. ...++...+.
T Consensus        23 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~  101 (283)
T cd05118          23 TGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIK  101 (283)
T ss_pred             CCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHH
Confidence            578899999865432        2466677777 89999999999999999999999997788888865 3578999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~  135 (283)
T cd05118         102 SYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG  135 (283)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC
Confidence            9999999999999999999999999999997644

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.77  E-value=2.8e-17  Score=105.67  Aligned_cols=104  Identities=17%  Similarity=0.279  Sum_probs=86.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~----~~~~~   67 (114)
                      +++.+|+|.+....       ..+|++.+.++ +||||++++++|..  .+.++++||++ +++|.+++..    ...++
T Consensus        25 ~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~  103 (287)
T cd06621          25 TGMIFALKTITTDPNPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIG  103 (287)
T ss_pred             CCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCC
Confidence            57889999986532       22467777777 99999999999864  45789999999 8899887642    34588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ......++.|++.|+.|+|+.+++|+|++|+||++++.+
T Consensus       104 ~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~  142 (287)
T cd06621         104 EKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG  142 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC
Confidence            899999999999999999999999999999999997654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0690|consensus

Probab=99.76  E-value=1.3e-19  Score=116.86  Aligned_cols=106  Identities=20%  Similarity=0.273  Sum_probs=93.2

Q ss_pred             CCcEEEEEEeccccch--h-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG--N-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~--~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|+++++..-  +       |-..+..+ +||++..+--.|++.+.+|+||||. ||.|.-.+.....+++.-.
T Consensus       192 t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~Rt  270 (516)
T KOG0690|consen  192 TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRT  270 (516)
T ss_pred             cCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhh
Confidence            7899999999876422  2       34455666 9999999999999999999999999 9999988877788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      ..+...++.|+.|||++++++||+|.+|+|++.+++-
T Consensus       271 RFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHI  307 (516)
T KOG0690|consen  271 RFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHI  307 (516)
T ss_pred             hhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCce
Confidence            9999999999999999999999999999999888753

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.76  E-value=7.2e-18  Score=110.66  Aligned_cols=103  Identities=17%  Similarity=0.274  Sum_probs=85.4

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~~   69 (114)
                      ||+.||+|.++...       ...|+..+.++ +|||++++++++...     ...++++|++++++.+.+.. ..+++.
T Consensus        29 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~  106 (336)
T cd07849          29 TGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKT-QHLSND  106 (336)
T ss_pred             CCCeEEEEEecccccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccccceEEEEehhcccCHHHHHhc-CCCCHH
Confidence            68899999986321       12366777777 899999999887543     35899999998888887744 569999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.++|+++++|+||+|+||+++..+
T Consensus       107 ~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~  143 (336)
T cd07849         107 HIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC  143 (336)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC
Confidence            9999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.76  E-value=4.1e-18  Score=111.33  Aligned_cols=104  Identities=20%  Similarity=0.260  Sum_probs=89.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC-----EEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK-----LAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-----~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      +|+.+|+|.+....        ...|+..+..+ +|+|++++.+++...+     ..+++||++++++.+++.....+++
T Consensus        24 ~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~  102 (330)
T cd07834          24 TGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTD  102 (330)
T ss_pred             CCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCCCCCH
Confidence            57899999886532        22467777777 8999999999987765     7899999998789998877678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.++|++|++|+|++|+||+++.++
T Consensus       103 ~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~  140 (330)
T cd07834         103 DHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC  140 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            99999999999999999999999999999999997764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0584|consensus

Probab=99.76  E-value=2.9e-18  Score=117.11  Aligned_cols=93  Identities=22%  Similarity=0.304  Sum_probs=81.8

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCC--EEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDK--LAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQG--IVLR   93 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~--i~h~   93 (114)
                      |+.+|..+ +||||+++|+++.+.+  ...+++|.+ .|+|.++..+.+......++.|++||+.|+.|||++.  |+||
T Consensus        91 Ev~lLKsL-~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHR  169 (632)
T KOG0584|consen   91 EVHLLKSL-KHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHR  169 (632)
T ss_pred             HHHHHccC-CCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCcccc
Confidence            56666666 9999999999998654  489999999 9999999999999999999999999999999999985  9999


Q ss_pred             CCCCCcEEEecCC--cccccc
Q psy14425         94 DLKLRKFVFCNAQ--RSVGHE  112 (114)
Q Consensus        94 ~lk~~nil~~~~~--~~~~~~  112 (114)
                      |||-+||+++...  .++||.
T Consensus       170 DLKCDNIFinG~~G~VKIGDL  190 (632)
T KOG0584|consen  170 DLKCDNIFVNGNLGEVKIGDL  190 (632)
T ss_pred             ccccceEEEcCCcCceeecch
Confidence            9999999996644  456764

>KOG0193|consensus

Probab=99.76  E-value=1.7e-18  Score=118.10  Aligned_cols=105  Identities=17%  Similarity=0.257  Sum_probs=89.1

Q ss_pred             EEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHH
Q psy14425          5 VVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKL   74 (114)
Q Consensus         5 ~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~   74 (114)
                      .||||.++.+.        ..+|+..+++. +|.||+-+++++-.+.. .+++.+| |.+|+..+.- ...|...+...|
T Consensus       416 dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idI  493 (678)
T KOG0193|consen  416 DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDI  493 (678)
T ss_pred             ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHH
Confidence            58999997654        22477788888 99999999999987766 9999999 7899999853 345899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                      +.|++.||.|||.++|+|||||..||++.+++ .++||
T Consensus       494 AqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgD  531 (678)
T KOG0193|consen  494 AQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGD  531 (678)
T ss_pred             HHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEec
Confidence            99999999999999999999999999998754 44554

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.76  E-value=1.7e-17  Score=101.50  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=63.5

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA-QGIVLRDLK   96 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk   96 (114)
                      |...+.++ .++++.....+....  .+++||++ ++++.........++......++.|++.++.++|. +|++|||+|
T Consensus        69 E~~~l~~l-~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlk  145 (190)
T cd05145          69 EFRNLKRL-YEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLS  145 (190)
T ss_pred             HHHHHHHH-HhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            44556666 677765444333332  47999999 55443332234567888899999999999999999 999999999


Q ss_pred             CCcEEEecCCccc
Q psy14425         97 LRKFVFCNAQRSV  109 (114)
Q Consensus        97 ~~nil~~~~~~~~  109 (114)
                      |+||+++++...+
T Consensus       146 P~NIll~~~~~~l  158 (190)
T cd05145         146 EYNILYHDGKPYI  158 (190)
T ss_pred             hhhEEEECCCEEE
Confidence            9999998444333

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.76  E-value=3e-17  Score=104.12  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=85.9

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~~   74 (114)
                      +..+|+|.+....     ..+|+..+.++ +|+|++++++++.. ...+++||++ +++|.+++.+.  ..++...+..+
T Consensus        30 ~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  107 (260)
T cd05073          30 HTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF  107 (260)
T ss_pred             CccEEEEecCCChhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHH
Confidence            4568999876432     22467777776 99999999999887 7789999999 78999998653  34788889999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|+|+.|++|+||+|+|++++.++.
T Consensus       108 ~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~  140 (260)
T cd05073         108 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLV  140 (260)
T ss_pred             HHHHHHHHHHHHhCCccccccCcceEEEcCCCc
Confidence            999999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.76  E-value=4e-17  Score=103.46  Aligned_cols=103  Identities=20%  Similarity=0.249  Sum_probs=82.2

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEE-cCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLL-GDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +..+|+|.+.....       ..|...+..+ +|||++++++++. .++..++++|++ +++|.+++... ...+.....
T Consensus        23 ~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  101 (262)
T cd05058          23 KIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLI  101 (262)
T ss_pred             eEEEEEEecCccCCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHH
Confidence            35689998753221       1255555665 9999999999765 455688999999 89999998653 346777788


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       102 ~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~  135 (262)
T cd05058         102 GFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF  135 (262)
T ss_pred             HHHHHHHHHHHHHHhCCccccccCcceEEEcCCC
Confidence            8999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0201|consensus

Probab=99.76  E-value=1.5e-19  Score=119.19  Aligned_cols=104  Identities=17%  Similarity=0.321  Sum_probs=93.2

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      |++.||+|+++.+..+       +|+..+..+ +++|+.++|+.|..+..+|++|||| +|++.+.++..+.+.+.....
T Consensus        37 t~k~vAiKii~Le~~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~  115 (467)
T KOG0201|consen   37 TKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAV  115 (467)
T ss_pred             ccceEEEEEechhhcchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeee
Confidence            7899999999766544       367777777 9999999999999999999999999 999999998877678888999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++++++.|+.|+|.++.+|||||+.||++...+
T Consensus       116 ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g  148 (467)
T KOG0201|consen  116 ILREVLKGLDYLHSEKKIHRDIKAANILLSESG  148 (467)
T ss_pred             ehHHHHHHhhhhhhcceecccccccceeEeccC
Confidence            999999999999999999999999999997763

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.76  E-value=2.3e-17  Score=108.76  Aligned_cols=104  Identities=23%  Similarity=0.309  Sum_probs=86.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++...      +..+++++++++++.+++.. ..++
T Consensus        41 ~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~-~~l~  118 (345)
T cd07877          41 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLT  118 (345)
T ss_pred             CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeecccccccccEEEEehhcccCHHHHHhc-CCCC
Confidence            67899999986432        12366677777 999999999988643      34788999888899888754 4689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.....++.|++.|+.|+|+++++|+|++|+||++++++.
T Consensus       119 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~  158 (345)
T cd07877         119 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE  158 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCC
Confidence            9999999999999999999999999999999999977653

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.76  E-value=4.4e-17  Score=105.82  Aligned_cols=104  Identities=20%  Similarity=0.296  Sum_probs=87.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~   71 (114)
                      +++.+|+|.+....         ...|+..+.++ +|+|++++.+++..++..++++|++.+++.+.+.. ...++...+
T Consensus        39 ~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~  117 (308)
T cd06634          39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI  117 (308)
T ss_pred             CCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHH
Confidence            46789999885321         11356666776 99999999999999999999999997788877653 345899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|+++++|+||+|+||+++.++
T Consensus       118 ~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~  152 (308)
T cd06634         118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG  152 (308)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC
Confidence            99999999999999999999999999999997655

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.76  E-value=3.6e-17  Score=103.40  Aligned_cols=104  Identities=21%  Similarity=0.401  Sum_probs=86.1

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      +|+.+|+|.+.....        ..|+..+.++ +|||++++++++..  ....++++|++ +++|.+++..    ...+
T Consensus        24 ~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l  102 (265)
T cd08217          24 DGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYI  102 (265)
T ss_pred             CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCC
Confidence            578899998864321        1256666666 99999999998763  46789999999 8899998864    3568


Q ss_pred             CHHHHHHHHHHHHHHHHHHH-----HCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACH-----AQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh-----~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.....++.|++.|+.|+|     +.+++|+|++|+||++++++
T Consensus       103 ~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~  147 (265)
T cd08217         103 EEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN  147 (265)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC
Confidence            99999999999999999999     88999999999999997754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.75  E-value=3.8e-17  Score=104.95  Aligned_cols=105  Identities=12%  Similarity=0.159  Sum_probs=86.1

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHH-----hCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR-----QRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~-----~~~~~~~~   69 (114)
                      +|+.+|+|.+....       ...|+..+.++.+|||++++++++...+..+++||++++++.++..     ....+++.
T Consensus        28 ~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~  107 (288)
T cd06616          28 SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEE  107 (288)
T ss_pred             CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHH
Confidence            57899999986542       1236667777756999999999999999999999999766655432     23569999


Q ss_pred             HHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|+|+. +++|+|++|+||+++..+
T Consensus       108 ~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~  145 (288)
T cd06616         108 ILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG  145 (288)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC
Confidence            9999999999999999985 999999999999997654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.75  E-value=3.5e-17  Score=104.26  Aligned_cols=101  Identities=21%  Similarity=0.265  Sum_probs=84.3

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHH
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKL   74 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~   74 (114)
                      ..+|+|......       ..+|+..+.++ +|||++++++++.. +..+++||++ +++|.+++.... .++......+
T Consensus        35 ~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  112 (270)
T cd05056          35 IAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILY  112 (270)
T ss_pred             cceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHH
Confidence            468889876443       22366667777 99999999998875 4577999999 889999997643 5899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|+++++|+|++|+||+++..+
T Consensus       113 ~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~  144 (270)
T cd05056         113 SYQLSTALAYLESKRFVHRDIAARNVLVSSPD  144 (270)
T ss_pred             HHHHHHHHHHHHhCCeeccccChheEEEecCC
Confidence            99999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.75  E-value=1.1e-17  Score=110.07  Aligned_cols=103  Identities=22%  Similarity=0.246  Sum_probs=85.8

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcC--------------CEEEEEecCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGD--------------KLAYLVFPPCSGDLHSYVR   61 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~--------------~~~~~v~e~~~~~l~~~~~   61 (114)
                      ||+.||+|.+....      ..+|+..+.++ +|||++++++++...              ...++++|++++++.+.+.
T Consensus        29 ~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~  107 (342)
T cd07854          29 CDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE  107 (342)
T ss_pred             CCcEEEEEEEecCCCchHHHHHHHHHHHHhc-CCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHH
Confidence            68899999985543      22467777777 999999999876543              3589999999778888775


Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      . ..+++.....++.|++.|+.|+|+.|++|+|++|+||+++..+
T Consensus       108 ~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~  151 (342)
T cd07854         108 Q-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED  151 (342)
T ss_pred             c-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC
Confidence            4 5689999999999999999999999999999999999997543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.75  E-value=5.4e-17  Score=103.88  Aligned_cols=105  Identities=27%  Similarity=0.343  Sum_probs=86.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhh--CCCCCcceEEEEEEcCCE-----EEEEecCCCCCHHHHHHhCC--
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRL--DSHPHINSLHEVLLGDKL-----AYLVFPPCSGDLHSYVRQRK--   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~--~~h~~i~~~~~~~~~~~~-----~~~v~e~~~~~l~~~~~~~~--   64 (114)
                      +|+.+|+|.+....        ..+|+..+.++  .+|||++++++++...+.     .++++|++.+++.+++....  
T Consensus        23 ~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~  102 (287)
T cd07838          23 TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKP  102 (287)
T ss_pred             CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCC
Confidence            57899999986432        11345444443  269999999999987766     99999999778988886533  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+++..+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       103 ~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~  144 (287)
T cd07838         103 GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG  144 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC
Confidence            489999999999999999999999999999999999997765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.75  E-value=3.8e-17  Score=104.74  Aligned_cols=100  Identities=22%  Similarity=0.214  Sum_probs=80.4

Q ss_pred             EEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .+++|.+......       .++..+.++ +|||++++++++.. ...++++|++ +++|.+++... +.+++.....++
T Consensus        38 ~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~  115 (279)
T cd05111          38 PVAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWC  115 (279)
T ss_pred             EEEEeecccccchHHHHHHHHHHHHHhcC-CCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHH
Confidence            4777877533221       233344555 99999999998754 4577889999 89999999653 568999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+|+||+||++++++
T Consensus       116 ~qi~~~l~~lH~~~iiH~dlkp~nili~~~~  146 (279)
T cd05111         116 VQIAKGMYYLEEHRMVHRNLAARNILLKSDS  146 (279)
T ss_pred             HHHHHHHHHHHHCCEeccccCcceEEEcCCC
Confidence            9999999999999999999999999997655

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.75  E-value=2.7e-17  Score=106.12  Aligned_cols=105  Identities=16%  Similarity=0.225  Sum_probs=86.7

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +|+.||+|.+......       .++..+.+..+|||++++++++.++...+++||++++++..+... ...+++.....
T Consensus        39 ~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~  118 (296)
T cd06618          39 TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGK  118 (296)
T ss_pred             CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHH
Confidence            4889999998654321       244445556579999999999999999999999997788777754 35688999999


Q ss_pred             HHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|+ .+++|+|++|+||++++++
T Consensus       119 i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~  152 (296)
T cd06618         119 MTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG  152 (296)
T ss_pred             HHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC
Confidence            99999999999997 5999999999999997654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0603|consensus

Probab=99.75  E-value=4.9e-18  Score=116.12  Aligned_cols=101  Identities=25%  Similarity=0.371  Sum_probs=86.5

Q ss_pred             CCcEEEEEEeccc--cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSRE--ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQI   78 (114)
Q Consensus         2 t~~~~avK~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (114)
                      |++..++|++++.  ..++|+..+....+|||++++.+.+.++...|+|||.+ ++-+.+.+.....++ .....|+.++
T Consensus       346 t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~l  424 (612)
T KOG0603|consen  346 TDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAEL  424 (612)
T ss_pred             cccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHH
Confidence            5678899998765  34567777777789999999999999999999999999 777777665555555 7777899999


Q ss_pred             HHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         79 AETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        79 ~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      +.++.|||.+|++|||+||+|||++
T Consensus       425 v~Av~~LH~~gvvhRDLkp~NIL~~  449 (612)
T KOG0603|consen  425 VSAVDYLHEQGVVHRDLKPGNILLD  449 (612)
T ss_pred             HHHHHHHHhcCeeecCCChhheeec
Confidence            9999999999999999999999995

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.75  E-value=4.7e-17  Score=103.54  Aligned_cols=105  Identities=18%  Similarity=0.250  Sum_probs=85.7

Q ss_pred             CCcEEEEEEecccc----------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--
Q psy14425          2 AGIVVVLEIMSREA----------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--   62 (114)
Q Consensus         2 t~~~~avK~~~~~~----------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--   62 (114)
                      +++.+|+|.+....                ...|+..+.+..+|||++++++++...+..++++||+ +++|.+++..  
T Consensus        25 ~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~  104 (269)
T cd08528          25 GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLK  104 (269)
T ss_pred             CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHH
Confidence            46789999874221                1124445555569999999999999999999999999 7899887742  


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         63 --RKRLKEAEARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        63 --~~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                        ...++....+.++.|++.++.|+|+ .+++|+|++|+||+++.++
T Consensus       105 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~  151 (269)
T cd08528         105 EKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD  151 (269)
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC
Confidence              3458999999999999999999996 6899999999999997665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.74  E-value=5.5e-17  Score=103.35  Aligned_cols=104  Identities=17%  Similarity=0.269  Sum_probs=82.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCC-CCCHHHHHHhC---
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPC-SGDLHSYVRQR---   63 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~-~~~l~~~~~~~---   63 (114)
                      +|+.+|+|.+..+.        ...|+..+.++ +|||++++++++....      ..+++++++ ++++.+++...   
T Consensus        26 ~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  104 (273)
T cd05074          26 SFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIG  104 (273)
T ss_pred             CceEEEEEEeccccCChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhccc
Confidence            46889999986542        12356666777 9999999999886432      246788998 88988776321   


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ---KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ---~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         ..++......++.|++.|+.|+|+++++|+|++|+||++++++
T Consensus       105 ~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~  150 (273)
T cd05074         105 EEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM  150 (273)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC
Confidence               2478889999999999999999999999999999999997554

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.74  E-value=4.7e-17  Score=103.63  Aligned_cols=101  Identities=21%  Similarity=0.253  Sum_probs=80.0

Q ss_pred             EEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCC-CCCHHHHHHh------C
Q psy14425          5 VVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPC-SGDLHSYVRQ------R   63 (114)
Q Consensus         5 ~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~-~~~l~~~~~~------~   63 (114)
                      .+|+|.++...        ...|...+.++ +|||++++++.+..      ....++++||+ +++|.+++..      .
T Consensus        28 ~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~  106 (272)
T cd05075          28 KVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCP  106 (272)
T ss_pred             eEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCc
Confidence            58999876432        11355666666 99999999987642      23578999999 8899887732      1


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++......++.|++.|+.|+|+++++|+|+||+||+++.++
T Consensus       107 ~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  149 (272)
T cd05075         107 QYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM  149 (272)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC
Confidence            2378999999999999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.74  E-value=7.5e-17  Score=103.19  Aligned_cols=103  Identities=21%  Similarity=0.299  Sum_probs=85.0

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC--------CC
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR--------KR   65 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~--------~~   65 (114)
                      +..+|+|.+.....       ..|...+.++ +|||++++++++.. +...+++++++ +++|.+++...        ..
T Consensus        35 ~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~  113 (280)
T cd05043          35 EEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQA  113 (280)
T ss_pred             eeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccC
Confidence            57889998764322       2356666777 99999999998665 57789999999 78999988643        34


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++......++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       114 l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~  154 (280)
T cd05043         114 LSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEEL  154 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCC
Confidence            88999999999999999999999999999999999996654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG4645|consensus

Probab=99.74  E-value=8.8e-19  Score=127.22  Aligned_cols=104  Identities=20%  Similarity=0.303  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+..|+|-+..+.        ..+|..++..+ +|||++++|++-...+.+++.|||| +|+|.++++-.+..++.-.+
T Consensus      1259 tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~ 1337 (1509)
T KOG4645|consen 1259 TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTR 1337 (1509)
T ss_pred             ccchhhhhhhhcCccccccCcchHHHHHHHHhc-cCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHH
Confidence            67888888775433        22466666666 9999999999999999999999999 99999999776778888889


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..|++.|+.|||..||+|||+||.||+++.++
T Consensus      1338 vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g 1371 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG 1371 (1509)
T ss_pred             HHHHHHHHHHHHHHhcCceecCCCccceeeecCC
Confidence            9999999999999999999999999999997665

>KOG1290|consensus

Probab=99.74  E-value=3.5e-17  Score=109.65  Aligned_cols=104  Identities=15%  Similarity=0.259  Sum_probs=86.6

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCC----C---CCcceEEEEEE----cCCEEEEEecCCCCCHHHHHHhC--
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDS----H---PHINSLHEVLL----GDKLAYLVFPPCSGDLHSYVRQR--   63 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~----h---~~i~~~~~~~~----~~~~~~~v~e~~~~~l~~~~~~~--   63 (114)
                      +.+.||+|+.+.+.     ..+||+++.+...    +   ..|+++++.|.    .+.++|+|+|++|..|..++...  
T Consensus       102 ~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~Y  181 (590)
T KOG1290|consen  102 NKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNY  181 (590)
T ss_pred             CCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCC
Confidence            35789999987543     3357888876522    2   37999999996    45689999999999999999753  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecC
Q psy14425         64 KRLKEAEARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~  105 (114)
                      +.+|...++.|+.|++.|+.|||. .|++|.||||+|||+...
T Consensus       182 rGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  182 RGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            469999999999999999999997 599999999999999665

>KOG0579|consensus

Probab=99.74  E-value=1.9e-18  Score=119.36  Aligned_cols=88  Identities=18%  Similarity=0.286  Sum_probs=78.7

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      |+.++..+ +||+++++++.|...+.+|+..||| ||-+..++-. ...+.+.+++.++.|++.|+.|||+++|+|||||
T Consensus        79 EIeILa~C-dHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLK  157 (1187)
T KOG0579|consen   79 EIEILAEC-DHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLK  157 (1187)
T ss_pred             hhhhhhcC-CChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhcc
Confidence            68888888 8999999999999999999999999 6666666544 4569999999999999999999999999999999


Q ss_pred             CCcEEEecCCc
Q psy14425         97 LRKFVFCNAQR  107 (114)
Q Consensus        97 ~~nil~~~~~~  107 (114)
                      ..|||++-+|.
T Consensus       158 AGNiL~TldGd  168 (1187)
T KOG0579|consen  158 AGNILLTLDGD  168 (1187)
T ss_pred             ccceEEEecCc
Confidence            99999977664

>KOG1095|consensus

Probab=99.74  E-value=2.9e-17  Score=118.34  Aligned_cols=101  Identities=23%  Similarity=0.295  Sum_probs=87.0

Q ss_pred             cEEEEEEeccccchh-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-------CCCCH
Q psy14425          4 IVVVLEIMSREASGN-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-------KRLKE   68 (114)
Q Consensus         4 ~~~avK~~~~~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-------~~~~~   68 (114)
                      ..||+|.+++.....       |...+.+. +||||+++.+++.+....++++||| +|+|..++++.       ..++.
T Consensus       723 ~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~  801 (1025)
T KOG1095|consen  723 IQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSM  801 (1025)
T ss_pred             eEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCH
Confidence            468999998765443       33344444 9999999999999999999999999 99999999764       23889


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .....++.+++.|+.||++++++||||..+|+|++..
T Consensus       802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~  838 (1025)
T KOG1095|consen  802 RDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER  838 (1025)
T ss_pred             HHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc
Confidence            9999999999999999999999999999999999775

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.74  E-value=5.6e-17  Score=105.09  Aligned_cols=100  Identities=23%  Similarity=0.256  Sum_probs=81.7

Q ss_pred             EEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHHH
Q psy14425          5 VVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~~   75 (114)
                      .+|+|.+.....       .+|...+.++ +|||++++++++... ..++++|++ +|++.+.+.... .++...+..++
T Consensus        38 ~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~  115 (303)
T cd05110          38 PVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWC  115 (303)
T ss_pred             eEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHH
Confidence            578888764432       2355566666 999999999998754 467889999 889999986643 58899999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|+++++|+|++|+||++++++
T Consensus       116 ~qi~~~L~~LH~~~ivH~dikp~Nill~~~~  146 (303)
T cd05110         116 VQIAKGMMYLEERRLVHRDLAARNVLVKSPN  146 (303)
T ss_pred             HHHHHHHHHHhhcCeeccccccceeeecCCC
Confidence            9999999999999999999999999996644

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PRK10345 hypothetical protein; Provisional

Probab=99.73  E-value=1.1e-16  Score=99.12  Aligned_cols=95  Identities=18%  Similarity=0.119  Sum_probs=73.6

Q ss_pred             EEEEeccc------cchhHHHHHhhhC----CCCCcceEEEEEEcCC---E-EEEEecCC---CCCHHHHHHhCCCCCHH
Q psy14425          7 VLEIMSRE------ASGNLLSAHYRLD----SHPHINSLHEVLLGDK---L-AYLVFPPC---SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         7 avK~~~~~------~~~~e~~~~~~~~----~h~~i~~~~~~~~~~~---~-~~~v~e~~---~~~l~~~~~~~~~~~~~   69 (114)
                      +||++...      ...+|+..+..+.    .||||++++++++++.   . +.+++|+.   +++|.+++.. +.+++.
T Consensus        28 ~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~  106 (210)
T PRK10345         28 CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED  106 (210)
T ss_pred             EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh
Confidence            68877543      2335777777762    5899999999999863   4 44789994   5899999965 456655


Q ss_pred             HHHHHHHHHHHHH-HHHHHCCCccCCCCCCcEEEec
Q psy14425         70 EARKLFRQIAETV-RACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        70 ~~~~~~~~~~~~l-~~lh~~~i~h~~lk~~nil~~~  104 (114)
                        ..++.|++.++ .|+|+++|+|||+||+|||++.
T Consensus       107 --~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345        107 --VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             --HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence              35677888777 9999999999999999999974

>KOG0577|consensus

Probab=99.73  E-value=3.7e-18  Score=117.02  Aligned_cols=105  Identities=20%  Similarity=0.290  Sum_probs=89.0

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~   71 (114)
                      |.+.||||+++-+..+         +|+.-+.++ +|||.+.+-+||......|+|||||-|+-.+++.- .+++-+-.+
T Consensus        50 n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEI  128 (948)
T KOG0577|consen   50 NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI  128 (948)
T ss_pred             ccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHH
Confidence            5688999998644322         255556667 99999999999999999999999998888888864 356888889


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .-++.+.+.|+.|||+.+.+|||||..|||+++.+.
T Consensus       129 AAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~  164 (948)
T KOG0577|consen  129 AAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL  164 (948)
T ss_pred             HHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe
Confidence            999999999999999999999999999999976553

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.73  E-value=4.2e-17  Score=105.53  Aligned_cols=104  Identities=22%  Similarity=0.324  Sum_probs=85.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC--------CEEEEEecCCCCCHHHHHHh-CC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD--------KLAYLVFPPCSGDLHSYVRQ-RK   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~--------~~~~~v~e~~~~~l~~~~~~-~~   64 (114)
                      +|+.+|+|.+....        ..+|+..+.++ +|||++++++++...        ..+++++||+.+++...+.. ..
T Consensus        32 ~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~  110 (311)
T cd07866          32 TGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSV  110 (311)
T ss_pred             CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhcccc
Confidence            57889999884321        23477777777 999999999987543        35799999997788777754 34


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+++..+..++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       111 ~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~  152 (311)
T cd07866         111 KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG  152 (311)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            699999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0986|consensus

Probab=99.73  E-value=2.4e-18  Score=114.54  Aligned_cols=106  Identities=22%  Similarity=0.228  Sum_probs=89.3

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~   69 (114)
                      ||+-||+|.+.+....         +|-.++.+. ..++|+.+--.|++.+.+|+|+..| ||+|.-.+-..+  .+++.
T Consensus       209 TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~  287 (591)
T KOG0986|consen  209 TGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQ  287 (591)
T ss_pred             chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchH
Confidence            6777777777544322         245566666 8899999988999999999999999 999987664433  69999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .+..++.+++.|+++||..+|++||+||+|||+++.++.
T Consensus       288 ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Ghv  326 (591)
T KOG0986|consen  288 RARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHV  326 (591)
T ss_pred             HHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCe
Confidence            999999999999999999999999999999999998875

>KOG0587|consensus

Probab=99.73  E-value=1.2e-16  Score=112.81  Aligned_cols=106  Identities=19%  Similarity=0.369  Sum_probs=89.7

Q ss_pred             CCcEEEEEEeccccch-----hHHHHHhhhCCCCCcceEEEEEE-----cCCEEEEEecCC-CCCHHHHHHh--CCCCCH
Q psy14425          2 AGIVVVLEIMSREASG-----NLLSAHYRLDSHPHINSLHEVLL-----GDKLAYLVFPPC-SGDLHSYVRQ--RKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-----~e~~~~~~~~~h~~i~~~~~~~~-----~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~   68 (114)
                      +|+..|+|+.......     .|.++++....|||++.++++|.     .++.+|+||||| +|++.++++.  ..++.+
T Consensus        43 ~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E  122 (953)
T KOG0587|consen   43 TGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKE  122 (953)
T ss_pred             cCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhh
Confidence            5778889988655322     24567777789999999999985     467899999999 8999999964  356999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..+..|+...+.|+.+||.+.++|||+|-.|||++..+.
T Consensus       123 ~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~  161 (953)
T KOG0587|consen  123 EWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE  161 (953)
T ss_pred             HHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc
Confidence            999999999999999999999999999999999966554

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.73  E-value=2.2e-17  Score=108.72  Aligned_cols=103  Identities=24%  Similarity=0.315  Sum_probs=86.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCE------EEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKL------AYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~------~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +++.||+|.+....        ...|+..+.++ +|||++++.+++...+.      .++++|+++++|.+++.. ..++
T Consensus        39 ~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~  116 (343)
T cd07851          39 TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC-QKLS  116 (343)
T ss_pred             CCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhc-CCCC
Confidence            57889999886421        11367777777 99999999988865544      899999998899998865 5699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..+..++.|++.|+.|+|++|++|+|++|+||++++++
T Consensus       117 ~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~  155 (343)
T cd07851         117 DDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC  155 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence            999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.72  E-value=4.2e-16  Score=94.87  Aligned_cols=102  Identities=29%  Similarity=0.485  Sum_probs=90.4

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +|+.+++|.+.....       .+|+..+..+ .|++++++++++......++++|++ +++|.+++... ..++.....
T Consensus        17 ~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~   95 (215)
T cd00180          17 TGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEIL   95 (215)
T ss_pred             CCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHH
Confidence            478999999976643       3567777777 8899999999999989999999999 69999998764 468999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      .++.+++.++.++|.++++|+|++|.||++++
T Consensus        96 ~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~  127 (215)
T cd00180          96 RILLQILEGLEYLHSNGIIHRDLKPENILLDS  127 (215)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC
Confidence            99999999999999999999999999999987

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=8.1e-17  Score=110.84  Aligned_cols=88  Identities=24%  Similarity=0.345  Sum_probs=74.7

Q ss_pred             hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q psy14425         18 NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-----KRLKEAEARKLFRQIAETVRACHAQGIVL   92 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h   92 (114)
                      +|+.++.++ +||||+++++++...+..+++++++.+++..++...     ..........++.|++.|+.|||++|++|
T Consensus       212 ~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiH  290 (501)
T PHA03210        212 NEILALGRL-NHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIH  290 (501)
T ss_pred             HHHHHHHhC-CCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            467777777 999999999999999999999999988888776432     12345667789999999999999999999


Q ss_pred             CCCCCCcEEEecCC
Q psy14425         93 RDLKLRKFVFCNAQ  106 (114)
Q Consensus        93 ~~lk~~nil~~~~~  106 (114)
                      |||||+|||++.++
T Consensus       291 rDLKP~NILl~~~~  304 (501)
T PHA03210        291 RDIKLENIFLNCDG  304 (501)
T ss_pred             CCCCHHHEEECCCC
Confidence            99999999997654

>KOG1027|consensus

Probab=99.71  E-value=1.4e-17  Score=116.77  Aligned_cols=103  Identities=18%  Similarity=0.270  Sum_probs=86.8

Q ss_pred             CCcEEEEEEeccc---cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC-C---CCHHHHHHH
Q psy14425          2 AGIVVVLEIMSRE---ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-R---LKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~-~---~~~~~~~~~   74 (114)
                      -|+.||||.+-.+   ..++|+..+...-+||||+++|+.-.++.+.|+..|.|..+|.+++...+ .   .........
T Consensus       532 e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~  611 (903)
T KOG1027|consen  532 EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISV  611 (903)
T ss_pred             CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHH
Confidence            3788999988554   35578998888889999999999999999999999999999999996531 1   122445778


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ..|++.|+.+||+.+++|||+||+|||++.
T Consensus       612 l~q~~~GlaHLHsl~iVHRDLkPQNILI~~  641 (903)
T KOG1027|consen  612 LSQIASGLAHLHSLKIVHRDLKPQNILISV  641 (903)
T ss_pred             HHHHHHHHHHHHhcccccccCCCceEEEEc
Confidence            899999999999999999999999999966

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.71  E-value=1.1e-16  Score=99.72  Aligned_cols=104  Identities=33%  Similarity=0.517  Sum_probs=90.6

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+....       ..+|+..+.++ +|+|++++++++......++++|++ +++|..++.....++......
T Consensus        13 ~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~   91 (244)
T smart00220       13 TGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARF   91 (244)
T ss_pred             CCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHH
Confidence            57899999986443       23467777777 9999999999999999999999999 669999987765689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.+++.++.++|+.+++|+|++|.||++++++
T Consensus        92 ~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~  124 (244)
T smart00220       92 YARQILSALEYLHSNGIIHRDLKPENILLDEDG  124 (244)
T ss_pred             HHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC
Confidence            999999999999999999999999999997754

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.71  E-value=1.9e-16  Score=104.21  Aligned_cols=102  Identities=25%  Similarity=0.319  Sum_probs=83.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+.+..        ..+|+..+..+ +|||+++++++|...      ..+++++|++..++....  ...++
T Consensus        39 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~--~~~~~  115 (342)
T cd07879          39 TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIM--GHPLS  115 (342)
T ss_pred             CCcEEEEEEecCccccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCCCceEEEEecccccCHHHHH--cCCCC
Confidence            57899999986431        22467777777 999999999998754      357999999977777664  23589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|+|+++++|+|++|+||+++.++
T Consensus       116 ~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~  154 (342)
T cd07879         116 EDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC  154 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0696|consensus

Probab=99.70  E-value=2.8e-18  Score=113.65  Aligned_cols=106  Identities=22%  Similarity=0.245  Sum_probs=91.5

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      |.+.||||+++++..-         .|-+.+.-..+-|++++++.+|++-+.+|+||||+ ||+|.-.++.-+.+.++.+
T Consensus       373 tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~A  452 (683)
T KOG0696|consen  373 TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVA  452 (683)
T ss_pred             cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchh
Confidence            5678999999876421         13444444446789999999999999999999999 9999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.+++.|+-+||++||++||||.+|+|++.+++
T Consensus       453 vFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH  488 (683)
T KOG0696|consen  453 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH  488 (683)
T ss_pred             hhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc
Confidence            999999999999999999999999999999987765

>KOG2345|consensus

Probab=99.70  E-value=2.1e-17  Score=102.87  Aligned_cols=107  Identities=20%  Similarity=0.311  Sum_probs=86.7

Q ss_pred             CCCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEc-----CCEEEEEecCC-CCCHHHHHHh---CC-
Q psy14425          1 MAGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLG-----DKLAYLVFPPC-SGDLHSYVRQ---RK-   64 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~-----~~~~~~v~e~~-~~~l~~~~~~---~~-   64 (114)
                      .|++.||+|.+.-...+      +|++..++. +|||+++++++...     ....|+++.|. .|+|.+.+..   .+ 
T Consensus        44 s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~  122 (302)
T KOG2345|consen   44 STGHLYALKKILCHSQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGN  122 (302)
T ss_pred             CcccchhhheeeccchHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCC
Confidence            36889999998544422      356666666 99999999887643     34599999998 8999998853   22 


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCcc
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~~~~~  108 (114)
                      .+++.....++.+++.|+.++|+..  ..|||+||.||++++.+..
T Consensus       123 ~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~  168 (302)
T KOG2345|consen  123 FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP  168 (302)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence            5899999999999999999999998  9999999999999875543

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.70  E-value=8.7e-17  Score=101.87  Aligned_cols=91  Identities=25%  Similarity=0.360  Sum_probs=78.4

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLKEAEARKLFRQIAETVRACHAQGIVLR   93 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~   93 (114)
                      |...+.++ +|||++++++++.+....++++||+ +++|.+.+..    ...+++.....++.|++.|+.|+|++|++|+
T Consensus        52 e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~  130 (260)
T cd08222          52 EAQLLSKL-DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHR  130 (260)
T ss_pred             HHHHHHhC-CCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence            45556666 9999999999999889999999999 8899888753    3458999999999999999999999999999


Q ss_pred             CCCCCcEEEecCCcccc
Q psy14425         94 DLKLRKFVFCNAQRSVG  110 (114)
Q Consensus        94 ~lk~~nil~~~~~~~~~  110 (114)
                      |++|+|++++++...++
T Consensus       131 ~l~~~nili~~~~~~l~  147 (260)
T cd08222         131 DLKAKNIFLKNNLLKIG  147 (260)
T ss_pred             CCChhheEeecCCEeec
Confidence            99999999986554443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0614|consensus

Probab=99.70  E-value=3.2e-18  Score=115.39  Aligned_cols=88  Identities=23%  Similarity=0.359  Sum_probs=82.0

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL   97 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~   97 (114)
                      |-+++..+ +.|+|+++|.-|.++.++|++||.| ||.+++.++++++|+..+++.++..+++|.+|||.+|+++|||||
T Consensus       470 Er~Im~~~-~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKP  548 (732)
T KOG0614|consen  470 ERNIMMEC-RSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKP  548 (732)
T ss_pred             HHHHHHhc-CchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCCh
Confidence            45566667 7999999999999999999999999 999999999999999999999999999999999999999999999


Q ss_pred             CcEEEecCCc
Q psy14425         98 RKFVFCNAQR  107 (114)
Q Consensus        98 ~nil~~~~~~  107 (114)
                      +|++++..+-
T Consensus       549 ENllLd~~Gy  558 (732)
T KOG0614|consen  549 ENLLLDNRGY  558 (732)
T ss_pred             hheeeccCCc
Confidence            9999987763

>KOG0596|consensus

Probab=99.69  E-value=1.8e-16  Score=107.60  Aligned_cols=93  Identities=23%  Similarity=0.310  Sum_probs=83.6

Q ss_pred             hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         18 NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      +|+..|.++-+|.+|++++|+-..++.+|+|||+-..+|.+++.+... .+.-.+..++.|++.++.++|+.||+|.|||
T Consensus       408 nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLK  487 (677)
T KOG0596|consen  408 NEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLK  487 (677)
T ss_pred             HHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCC
Confidence            589999999999999999999999999999999888999999987554 4434788899999999999999999999999


Q ss_pred             CCcEEEecCCcccc
Q psy14425         97 LRKFVFCNAQRSVG  110 (114)
Q Consensus        97 ~~nil~~~~~~~~~  110 (114)
                      |.|+|+..+..++.
T Consensus       488 PANFLlVkG~LKLI  501 (677)
T KOG0596|consen  488 PANFLLVKGRLKLI  501 (677)
T ss_pred             cccEEEEeeeEEee
Confidence            99999998877763

>KOG4279|consensus

Probab=99.69  E-value=1.3e-16  Score=111.27  Aligned_cols=104  Identities=19%  Similarity=0.265  Sum_probs=88.5

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCC--CHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRL--KEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~--~~~~~   71 (114)
                      |....|||-+.....+      .|+....++ +|.||+++.+++..++++-+.||-. ||+|..++++. +++  .+.+.
T Consensus       599 tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm  677 (1226)
T KOG4279|consen  599 TQVRIAIKEIPEKDSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTM  677 (1226)
T ss_pred             ceeEEEeeecccccchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHH
Confidence            4566788877543322      467777777 9999999999999999999999999 99999999764 556  78888


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+.+|+++|+.|||.+.|+|||||-+|+|++...
T Consensus       678 ~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS  712 (1226)
T KOG4279|consen  678 NFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS  712 (1226)
T ss_pred             HHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc
Confidence            99999999999999999999999999999997644

>KOG0196|consensus

Probab=99.69  E-value=1e-16  Score=112.37  Aligned_cols=104  Identities=21%  Similarity=0.279  Sum_probs=92.2

Q ss_pred             cEEEEEEeccccchh-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          4 IVVVLEIMSREASGN-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         4 ~~~avK~~~~~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      ..||||.++....++       |..++.+. .||||+++-++......+.+++||| .|+|+.+++.+ +.|...++..+
T Consensus       658 ~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgM  736 (996)
T KOG0196|consen  658 ITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGM  736 (996)
T ss_pred             eeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHH
Confidence            579999998765443       55566666 9999999999999999999999999 99999999864 66999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      ++.++.||.||-+.+.+||||...|||++.+-.|
T Consensus       737 LrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvC  770 (996)
T KOG0196|consen  737 LRGIASGMKYLSDMNYVHRDLAARNILVNSNLVC  770 (996)
T ss_pred             HHHHHHHhHHHhhcCchhhhhhhhheeeccceEE
Confidence            9999999999999999999999999999887655

>KOG0695|consensus

Probab=99.68  E-value=4.3e-17  Score=105.89  Aligned_cols=107  Identities=20%  Similarity=0.335  Sum_probs=92.3

Q ss_pred             CCCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|.+.||+|+++++...         .|-...-...+||+++.++.+|++...+++|.||. +|+|.-.+..+..+|++.
T Consensus       273 ~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeh  352 (593)
T KOG0695|consen  273 KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH  352 (593)
T ss_pred             ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHH
Confidence            47788999998765322         23334445569999999999999999999999999 999988887778899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..+...++.|+.|||++|+++||+|.+|+|++..++
T Consensus       353 arfys~ei~lal~flh~rgiiyrdlkldnvlldaegh  389 (593)
T KOG0695|consen  353 ARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH  389 (593)
T ss_pred             hhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc
Confidence            9999999999999999999999999999999987664

>KOG3653|consensus

Probab=99.68  E-value=2.1e-16  Score=105.54  Aligned_cols=107  Identities=17%  Similarity=0.155  Sum_probs=87.1

Q ss_pred             CCcEEEEEEeccc---cchhHHHHHhh-hCCCCCcceEEEEEEcCC----EEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSRE---ASGNLLSAHYR-LDSHPHINSLHEVLLGDK----LAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~---~~~~e~~~~~~-~~~h~~i~~~~~~~~~~~----~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||||++..+   +..+|-++..- .++|+||+++++.-+...    .+|+|++|. .|+|.+++.. ..+++....
T Consensus       232 ~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~-ntisw~~~c  310 (534)
T KOG3653|consen  232 DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA-NTISWNSLC  310 (534)
T ss_pred             cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHh-ccccHHHHH
Confidence            3689999999644   34445443321 349999999998876554    799999999 9999999965 568999999


Q ss_pred             HHHHHHHHHHHHHHHC---------CCccCCCCCCcEEEecCCccc
Q psy14425         73 KLFRQIAETVRACHAQ---------GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~---------~i~h~~lk~~nil~~~~~~~~  109 (114)
                      .++..+++|+.|||..         .|.|||+|.+|||+.++..+.
T Consensus       311 ria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc  356 (534)
T KOG3653|consen  311 RIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC  356 (534)
T ss_pred             HHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence            9999999999999963         499999999999998877664

>KOG0665|consensus

Probab=99.68  E-value=4.1e-17  Score=104.49  Aligned_cols=101  Identities=25%  Similarity=0.297  Sum_probs=82.5

Q ss_pred             CCcEEEEEEeccc--------cchhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSRE--------ASGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      ++++||+|.....        +...|...+..+ +|+|+++++.+|....      ..|+|||++..+|.+.+.  -.++
T Consensus        40 ~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~--~elD  116 (369)
T KOG0665|consen   40 LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL--MELD  116 (369)
T ss_pred             ccCceehhhhcCccccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH--Hhcc
Confidence            5778888887432        122466655555 9999999999996543      589999999888888775  4488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .....+++.|++.|+.|+|+.|++||||||+||++..+
T Consensus       117 H~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~  154 (369)
T KOG0665|consen  117 HETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD  154 (369)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch
Confidence            89999999999999999999999999999999999654

>KOG2052|consensus

Probab=99.67  E-value=4.1e-16  Score=103.57  Aligned_cols=106  Identities=21%  Similarity=0.180  Sum_probs=86.8

Q ss_pred             CcEEEEEEecccc---chhHHHHHhh-hCCCCCcceEEEEEEcC----CEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREA---SGNLLSAHYR-LDSHPHINSLHEVLLGD----KLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~---~~~e~~~~~~-~~~h~~i~~~~~~~~~~----~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      |+.||||++...+   +.+|.++..+ +++|+||..+.+.=-.+    ..+|++++|. .|+|.+++.. ..++......
T Consensus       234 Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~  312 (513)
T KOG2052|consen  234 GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLK  312 (513)
T ss_pred             CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHH
Confidence            7899999996443   3456665554 46999999887764322    3599999999 9999999976 6799999999


Q ss_pred             HHHHHHHHHHHHHHC--------CCccCCCCCCcEEEecCCccc
Q psy14425         74 LFRQIAETVRACHAQ--------GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~--------~i~h~~lk~~nil~~~~~~~~  109 (114)
                      ++..++.|+.+||..        .+.|||||..|||+..++.|.
T Consensus       313 LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~  356 (513)
T KOG2052|consen  313 LALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  356 (513)
T ss_pred             HHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence            999999999999964        389999999999998887764

>KOG0984|consensus

Probab=99.67  E-value=5.6e-16  Score=94.65  Aligned_cols=106  Identities=12%  Similarity=0.220  Sum_probs=88.9

Q ss_pred             CCcEEEEEEeccccchh-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHH----hCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREASGN-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR----QRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~----~~~~~~~~~   70 (114)
                      ||+..|+|.+......+       ++++.++...+|+.+.+|+.+.....+|+.||.|..++..+-+    ..+.+++..
T Consensus        70 sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~v  149 (282)
T KOG0984|consen   70 SGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDV  149 (282)
T ss_pred             CCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHH
Confidence            68899999986553332       4555666778999999999999999999999999888887654    356799999


Q ss_pred             HHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~~  107 (114)
                      +-.++..+..|+.|||++ .++|||+||+|||++..+.
T Consensus       150 lGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~Gq  187 (282)
T KOG0984|consen  150 LGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQ  187 (282)
T ss_pred             hhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCc
Confidence            999999999999999986 7999999999999987664

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.67  E-value=2.8e-15  Score=92.68  Aligned_cols=104  Identities=34%  Similarity=0.516  Sum_probs=89.8

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC-CCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR-LKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~-~~~~~~~   72 (114)
                      +++.+|+|.+.....       ..|+..+.++ +|+|++++++.+......++++|++ +++|.+++..... ++.....
T Consensus        23 ~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~  101 (225)
T smart00221       23 TGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEAR  101 (225)
T ss_pred             CCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHH
Confidence            468899999975432       2356666677 9999999999999989999999999 6699999977665 8999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.+++.++.++|++++.|+|++|.|++++..+
T Consensus       102 ~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~  135 (225)
T smart00221      102 FYLRQILEALEYLHSLGIVHRDLKPENILLGMDG  135 (225)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999997653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4257|consensus

Probab=99.66  E-value=5.6e-16  Score=106.98  Aligned_cols=105  Identities=19%  Similarity=0.272  Sum_probs=85.1

Q ss_pred             EEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      -||||.-+.+...       .|..++++. +||||+++.+++.. ...|++||.+ -|.|..+++.+ .+++..+...++
T Consensus       420 aVAvKtCK~d~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~  497 (974)
T KOG4257|consen  420 AVAVKTCKTDCTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYC  497 (974)
T ss_pred             eeeeehhccCCChhhHHHHHHHHHHHHhC-CCcchhheeeeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHH
Confidence            4788877664322       234444445 99999999999864 5799999999 89999999765 469999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEE-ecCCccccc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVF-CNAQRSVGH  111 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~-~~~~~~~~~  111 (114)
                      .|++.++.|||+++++||||...|||+ ++.-.++||
T Consensus       498 ~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaD  534 (974)
T KOG4257|consen  498 YQICTALAYLESKRFVHRDIAARNILVSSPQCVKLAD  534 (974)
T ss_pred             HHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecc
Confidence            999999999999999999999999999 445455554

>KOG1167|consensus

Probab=99.66  E-value=7.7e-16  Score=101.27  Aligned_cols=102  Identities=25%  Similarity=0.347  Sum_probs=88.8

Q ss_pred             CCcEEEEEEeccc----cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSRE----ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      +.+.||+|.+...    ...+|++.+..+.++.|++.+.+++...+.+.+++||. ..+..++...   ++...+..+++
T Consensus        63 ~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~  139 (418)
T KOG1167|consen   63 KRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLR  139 (418)
T ss_pred             ccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHH
Confidence            3678999998543    45578999999999999999999999999999999999 5677776643   77889999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|+.++|.+||+|||+||+|++++...
T Consensus       140 ~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t  169 (418)
T KOG1167|consen  140 NLLKALAHLHKNGIVHRDIKPSNFLYNRRT  169 (418)
T ss_pred             HHHHHhhhhhccCccccCCCcccccccccc
Confidence            999999999999999999999999997643

>KOG0983|consensus

Probab=99.66  E-value=1.7e-16  Score=100.38  Aligned_cols=107  Identities=12%  Similarity=0.189  Sum_probs=87.6

Q ss_pred             CCCcEEEEEEeccccchhHHH-------HHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          1 MAGIVVVLEIMSREASGNLLS-------AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~~~e~~-------~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +||...|||.+.+.....|..       ++.+..+.|.|++++++|.....+++.||.|+..+..+++. .+++|+..+-
T Consensus       115 s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilG  194 (391)
T KOG0983|consen  115 STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILG  194 (391)
T ss_pred             ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhh
Confidence            378899999998776555433       33344468999999999999999999999887777777754 4678998888


Q ss_pred             HHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~~  107 (114)
                      .+...++.|+.||-.+ +++|||+||+|||++..+.
T Consensus       195 k~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~Gn  230 (391)
T KOG0983|consen  195 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGN  230 (391)
T ss_pred             hhHHHHHHHHHHHHHhcceeecccCccceEEccCCC
Confidence            8999999999999975 7999999999999977553

>KOG1151|consensus

Probab=99.65  E-value=1.7e-15  Score=101.50  Aligned_cols=105  Identities=25%  Similarity=0.336  Sum_probs=86.6

Q ss_pred             CcEEEEEEeccccch-h------------HHHHHhhhCCCCCcceEEEEEE-cCCEEEEEecCC-CCCHHHHHHhCCCCC
Q psy14425          3 GIVVVLEIMSREASG-N------------LLSAHYRLDSHPHINSLHEVLL-GDKLAYLVFPPC-SGDLHSYVRQRKRLK   67 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-~------------e~~~~~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~-~~~l~~~~~~~~~~~   67 (114)
                      .+.||+|+-.....+ +            |-.+...+ +||.|+++|++|. +.+.+|.|+||| |.+|.-+++....++
T Consensus       488 qRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmS  566 (775)
T KOG1151|consen  488 QRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMS  566 (775)
T ss_pred             hheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-CcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhh
Confidence            467899986433222 1            33334445 9999999999996 567899999999 889999998888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHC--CCccCCCCCCcEEEecCCcc
Q psy14425         68 EAEARKLFRQIAETVRACHAQ--GIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~--~i~h~~lk~~nil~~~~~~~  108 (114)
                      +..+.+|+.|++.|+.||...  .|+|-||||.|||+.+++.|
T Consensus       567 EKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac  609 (775)
T KOG1151|consen  567 EKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC  609 (775)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence            999999999999999999975  59999999999999877644

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.65  E-value=1.6e-15  Score=100.51  Aligned_cols=93  Identities=19%  Similarity=0.142  Sum_probs=69.2

Q ss_pred             CCcEEEEEEeccc-----------cchhHHHHHhhhCCCCCcce-EEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSRE-----------ASGNLLSAHYRLDSHPHINS-LHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~-----------~~~~e~~~~~~~~~h~~i~~-~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.+|||.....           ....|+..+.++ +|+|++. +++.    +..+++|||+ +++|... ..   .. 
T Consensus        43 ~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~----~~~~LVmE~~~G~~L~~~-~~---~~-  112 (365)
T PRK09188         43 PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT----GKDGLVRGWTEGVPLHLA-RP---HG-  112 (365)
T ss_pred             CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc----CCcEEEEEccCCCCHHHh-Cc---cc-
Confidence            4677899986422           123578888888 8999885 4432    4579999999 7788632 11   11 


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCC-CCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDL-KLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~l-k~~nil~~~~~  106 (114)
                        ...++.|++.++.|+|++|++|||| ||+|||++.++
T Consensus       113 --~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~  149 (365)
T PRK09188        113 --DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG  149 (365)
T ss_pred             --hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC
Confidence              1457889999999999999999999 99999996554

>KOG0671|consensus

Probab=99.64  E-value=5.4e-16  Score=101.20  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=84.9

Q ss_pred             CCcEEEEEEecc-----ccchhHHHHHhhhCCC-C----CcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy14425          2 AGIVVVLEIMSR-----EASGNLLSAHYRLDSH-P----HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK--RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~-----~~~~~e~~~~~~~~~h-~----~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~--~~~~~   69 (114)
                      ++..+|+|+++.     +...-|++.+.++.++ |    -.+++.++|.-.++.|+|+|.+|-++.++++.++  ++|..
T Consensus       113 ~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~  192 (415)
T KOG0671|consen  113 TKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPID  192 (415)
T ss_pred             CCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchH
Confidence            467788888753     2233467777777333 2    2455677788899999999999999999998754  58999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.+..|++.++.+||+.+++|.||||+||++.+..
T Consensus       193 ~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~  229 (415)
T KOG0671|consen  193 HIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSE  229 (415)
T ss_pred             HHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccc
Confidence            9999999999999999999999999999999996543

>KOG1345|consensus

Probab=99.64  E-value=3e-16  Score=99.17  Aligned_cols=102  Identities=25%  Similarity=0.362  Sum_probs=83.6

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEE-EEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEV-LLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~-~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      |++.+++|.+.+...     .+|...-..+.-|.||+..|++ |++.+.+.+++|++ .|+|...+.. .++.+.....+
T Consensus        48 s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v  126 (378)
T KOG1345|consen   48 SKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKV  126 (378)
T ss_pred             CceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc-ccccHHHHHHH
Confidence            567889998876532     2344333445678899988776 78889999999999 8999988765 45888889999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +.|++.|+.|||+++++|||||.+|||+-.
T Consensus       127 ~~ql~SAi~fMHsknlVHRdlK~eNiLif~  156 (378)
T KOG1345|consen  127 FAQLLSAIEFMHSKNLVHRDLKAENILIFD  156 (378)
T ss_pred             HHHHHHHHHHhhccchhhcccccceEEEec
Confidence            999999999999999999999999999943

>KOG4278|consensus

Probab=99.64  E-value=3e-16  Score=108.54  Aligned_cols=102  Identities=17%  Similarity=0.273  Sum_probs=86.5

Q ss_pred             cEEEEEEeccccch-----hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC--CCHHHHHHHH
Q psy14425          4 IVVVLEIMSREASG-----NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR--LKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~~~-----~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~--~~~~~~~~~~   75 (114)
                      ..||||.++.+..+     +|..++.-+ +|||++++.++|...-.+|+++||| .|.|.++++++.+  ++.-.+..++
T Consensus       293 lTvAVKtLKEDtMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMA  371 (1157)
T KOG4278|consen  293 LTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMA  371 (1157)
T ss_pred             eeeehhhhhhcchhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHH
Confidence            46788888766544     345555555 9999999999999888999999999 9999999987543  6777778899


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      -||..||+||..++++||||...|+|+.++.
T Consensus       372 tQIsSaMeYLEkknFIHRDLAARNCLVgEnh  402 (1157)
T KOG4278|consen  372 TQISSAMEYLEKKNFIHRDLAARNCLVGENH  402 (1157)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhccccccc
Confidence            9999999999999999999999999997765

>KOG1163|consensus

Probab=99.64  E-value=4e-15  Score=92.88  Aligned_cols=107  Identities=16%  Similarity=0.134  Sum_probs=86.8

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~~~~   76 (114)
                      +|+.||||.-+...    ...|..+..-+..-..++.+..++...++-.+|||.+|.+|.++...+ .+++..++.-++-
T Consensus        39 ~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaD  118 (341)
T KOG1163|consen   39 SGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLAD  118 (341)
T ss_pred             CCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHH
Confidence            58999999875443    223555444453445777788888888899999999999999998754 5699999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      |++..++|+|.++++||||||+|+|+.-+..+
T Consensus       119 Qml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~  150 (341)
T KOG1163|consen  119 QMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHC  150 (341)
T ss_pred             HHHHHHHHHHhhccccccCCccceeecccccc
Confidence            99999999999999999999999999765543

>KOG0199|consensus

Probab=99.62  E-value=7.8e-16  Score=107.28  Aligned_cols=106  Identities=23%  Similarity=0.306  Sum_probs=89.6

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHHHHHH
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~~~~~   73 (114)
                      -.||||++..+.       ...|...+.++ +|+|++++|++..+ ...-+|+|.+ .|+|.+.+.+  ...|.......
T Consensus       139 V~VAVKclr~d~l~~~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcd  216 (1039)
T KOG0199|consen  139 VNVAVKCLRDDSLNAIMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCD  216 (1039)
T ss_pred             EeEEEEeccCCccchhHHHHHHHHHHHHhc-cCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHH
Confidence            468999986543       33577788888 99999999999887 6788999999 9999999876  35688999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEE-ecCCccccc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVF-CNAQRSVGH  111 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~-~~~~~~~~~  111 (114)
                      |+.|++.||.||.+++++|||+...|+++ .....+++|
T Consensus       217 ya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~D  255 (1039)
T KOG0199|consen  217 YAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICD  255 (1039)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeec
Confidence            99999999999999999999999999999 445555654

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=1.6e-14  Score=89.34  Aligned_cols=100  Identities=17%  Similarity=0.204  Sum_probs=77.5

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      .|..+++|......              ...|...+..+ .++++..+..++...+..+++||++ +++|.+.+..... 
T Consensus        18 ~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~-   95 (211)
T PRK14879         18 LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM-   95 (211)
T ss_pred             CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH-
Confidence            46778899764321              12355566666 7888877777777777889999999 8899988754322 


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         ....++.+++.++.++|+.+++|+|++|.||+++++.
T Consensus        96 ---~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~~~~  132 (211)
T PRK14879         96 ---EELELSREIGRLVGKLHSAGIIHGDLTTSNMILSGGK  132 (211)
T ss_pred             ---HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEECCC
Confidence               6778899999999999999999999999999998443

>KOG0576|consensus

Probab=99.61  E-value=1.1e-16  Score=110.49  Aligned_cols=105  Identities=17%  Similarity=0.295  Sum_probs=91.7

Q ss_pred             CCcEEEEEEeccc------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSRE------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      |++..|+|.++..      ..++|+-++.-+ +||||+.+++.+...+.+|+.|||| +|+|.+.-.-.+.+++.++...
T Consensus        39 s~elaavkvVkLep~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tgplselqiayv  117 (829)
T KOG0576|consen   39 SGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYV  117 (829)
T ss_pred             cCchhhheeeeccCCccccccccceeeeecC-CCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHH
Confidence            5788899988654      244677777777 9999999999999999999999999 8899887766688999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++..+.|+.|+|++|-+|||+|-.||++++.+.
T Consensus       118 cRetl~gl~ylhs~gk~hRdiKGanilltd~gD  150 (829)
T KOG0576|consen  118 CRETLQGLKYLHSQGKIHRDIKGANILLTDEGD  150 (829)
T ss_pred             HhhhhccchhhhcCCcccccccccceeecccCc
Confidence            999999999999999999999999999966554

>smart00090 RIO RIO-like kinase

Probab=99.61  E-value=5.9e-15  Score=93.09  Aligned_cols=99  Identities=17%  Similarity=0.158  Sum_probs=70.6

Q ss_pred             CCcEEEEEEecccc------------------------------chhHHHHHhhhCCC--CCcceEEEEEEcCCEEEEEe
Q psy14425          2 AGIVVVLEIMSREA------------------------------SGNLLSAHYRLDSH--PHINSLHEVLLGDKLAYLVF   49 (114)
Q Consensus         2 t~~~~avK~~~~~~------------------------------~~~e~~~~~~~~~h--~~i~~~~~~~~~~~~~~~v~   49 (114)
                      +|+.||+|.+....                              ...|+..+.++ .+  ..++++++.    ...+++|
T Consensus        53 ~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L-~~~~i~~p~~~~~----~~~~lV~  127 (237)
T smart00090       53 SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL-YEAGVPVPKPIAW----RRNVLVM  127 (237)
T ss_pred             CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-HhcCCCCCeeeEe----cCceEEE
Confidence            68999999986431                              12356666666 33  233444432    2347999


Q ss_pred             cCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCCCcEEEecC
Q psy14425         50 PPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQG-IVLRDLKLRKFVFCNA  105 (114)
Q Consensus        50 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~-i~h~~lk~~nil~~~~  105 (114)
                      |++ +.++.........+.......++.|++.++.++|..| ++|+|++|+||+++++
T Consensus       128 E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~~~  185 (237)
T smart00090      128 EFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVHDG  185 (237)
T ss_pred             EEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEECC
Confidence            999 5566554433345666667889999999999999999 9999999999999843

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.60  E-value=8.6e-15  Score=91.55  Aligned_cols=98  Identities=15%  Similarity=0.228  Sum_probs=74.7

Q ss_pred             CcEEEEEEecccc---------------chhHHHHHhhhCCCCCcceEEEEEEcC--------CEEEEEecCC-CCCHHH
Q psy14425          3 GIVVVLEIMSREA---------------SGNLLSAHYRLDSHPHINSLHEVLLGD--------KLAYLVFPPC-SGDLHS   58 (114)
Q Consensus         3 ~~~~avK~~~~~~---------------~~~e~~~~~~~~~h~~i~~~~~~~~~~--------~~~~~v~e~~-~~~l~~   58 (114)
                      +..+|+|.+....               .++|+..+.++ +||++..+.+++...        +..+++|||+ |.+|.+
T Consensus        54 ~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~  132 (232)
T PRK10359         54 YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELND  132 (232)
T ss_pred             CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHH
Confidence            5679999985321               23456667788 999999999887633        3589999999 678877


Q ss_pred             HHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         59 YVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      ..    .++.    ....+++.++..+|..|++|+|++|+|+++++++..+
T Consensus       133 ~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~gi~l  175 (232)
T PRK10359        133 MP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNGLRI  175 (232)
T ss_pred             hh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCCEEE
Confidence            63    1232    3456899999999999999999999999998876443

>KOG1165|consensus

Probab=99.60  E-value=1.5e-14  Score=93.72  Aligned_cols=105  Identities=14%  Similarity=0.149  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~   76 (114)
                      +++.||||.=.+.+    ..+|......+...++|...|-+...+.+-.+|+|.+|.+|.++..-++ .|+..++.-++.
T Consensus        52 nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~  131 (449)
T KOG1165|consen   52 NNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAK  131 (449)
T ss_pred             cCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHH
Confidence            68999999875443    3346666666667889999988888888889999999999999997655 599999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |++..++++|++++++||+||+|+|+...+
T Consensus       132 Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~  161 (449)
T KOG1165|consen  132 QMITRIEYVHEKDLIYRDIKPDNFLIGRPG  161 (449)
T ss_pred             HHHHHHHHHHhcceeecccCccceeecCCC
Confidence            999999999999999999999999996544

>KOG0669|consensus

Probab=99.60  E-value=1.1e-16  Score=100.34  Aligned_cols=104  Identities=23%  Similarity=0.318  Sum_probs=84.9

Q ss_pred             CCcEEEEEEecc----cc----chhHHHHHhhhCCCCCcceEEEEEEc--------CCEEEEEecCCCCCHHHHHHhC-C
Q psy14425          2 AGIVVVLEIMSR----EA----SGNLLSAHYRLDSHPHINSLHEVLLG--------DKLAYLVFPPCSGDLHSYVRQR-K   64 (114)
Q Consensus         2 t~~~~avK~~~~----~~----~~~e~~~~~~~~~h~~i~~~~~~~~~--------~~~~~~v~e~~~~~l~~~~~~~-~   64 (114)
                      ||+.||+|+.-.    ..    .-+|+.++..+ +|+|++.+.+++.+        ...+++|+++|..+|.-++... .
T Consensus        41 ~~kkvalkkvlmeneKeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~v  119 (376)
T KOG0669|consen   41 TGKKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKV  119 (376)
T ss_pred             ccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccc
Confidence            677888887632    21    22467777777 99999888777642        2459999999999999998654 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++...++.++.+++.|+.|+|.+.++|||.||.|+|++.++
T Consensus       120 r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg  161 (376)
T KOG0669|consen  120 RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG  161 (376)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc
Confidence            699999999999999999999999999999999999998855

>KOG0200|consensus

Probab=99.59  E-value=1.9e-14  Score=101.15  Aligned_cols=105  Identities=23%  Similarity=0.315  Sum_probs=91.3

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      ...||||..+....       ..|++.+..+..|+|++.+.+++..++.+++++||+ .|+|..+++..+          
T Consensus       328 ~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~  407 (609)
T KOG0200|consen  328 YVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGV  407 (609)
T ss_pred             eEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCC
Confidence            45789999864432       247778888889999999999999999999999999 999999997654          


Q ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 ------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                            .++......+..|++.||+||.++.++|||+..+|||+..+..
T Consensus       408 ~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~  456 (609)
T KOG0200|consen  408 FPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKV  456 (609)
T ss_pred             CccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCE
Confidence                  3888899999999999999999999999999999999987743

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.56  E-value=5.4e-14  Score=90.92  Aligned_cols=80  Identities=11%  Similarity=0.148  Sum_probs=66.4

Q ss_pred             CCCCCcceEEEEEEcCC----EEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE
Q psy14425         27 DSHPHINSLHEVLLGDK----LAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVF  102 (114)
Q Consensus        27 ~~h~~i~~~~~~~~~~~----~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~  102 (114)
                      ..|++++.++++.....    ..+++++.+..++.+.+......++..+..++.|++.|+.|+|+++++||||||+|||+
T Consensus        80 ~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill  159 (294)
T PHA02882         80 IDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV  159 (294)
T ss_pred             CCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            48999999998765433    45778888877777777655557888899999999999999999999999999999999


Q ss_pred             ecCC
Q psy14425        103 CNAQ  106 (114)
Q Consensus       103 ~~~~  106 (114)
                      +.++
T Consensus       160 ~~~~  163 (294)
T PHA02882        160 DGNN  163 (294)
T ss_pred             cCCC
Confidence            7644

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.54  E-value=5.2e-14  Score=86.34  Aligned_cols=97  Identities=18%  Similarity=0.206  Sum_probs=70.6

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      +|..+++|......              ...|...+..+ .++++..+.-++...+..+++||++ ++++.+.+..... 
T Consensus        16 ~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-   93 (199)
T TIGR03724        16 LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-   93 (199)
T ss_pred             CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-
Confidence            46788999854321              11356666666 6665554444445566678999999 8899887644211 


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                            .++.+++.++.++|+.|++|+|++|.|++++++.
T Consensus        94 ------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~~~~  127 (199)
T TIGR03724        94 ------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDDK  127 (199)
T ss_pred             ------HHHHHHHHHHHHHHHCCeecCCCCcceEEEECCc
Confidence                  6789999999999999999999999999998433

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0664|consensus

Probab=99.54  E-value=3e-16  Score=99.59  Aligned_cols=104  Identities=19%  Similarity=0.239  Sum_probs=83.9

Q ss_pred             CCcEEEEEEeccc--------cchhHHHHHhhhCCCCCcceEEEEEEcCC-----EEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSRE--------ASGNLLSAHYRLDSHPHINSLHEVLLGDK-----LAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~--------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-----~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      +|+.+|+|++..-        ..-.|+.++... +|.|+....++.+..+     .+|.++|.+..+|.+++-+-..++.
T Consensus        77 dgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~  155 (449)
T KOG0664|consen   77 SGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQALTP  155 (449)
T ss_pred             CccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheeccCCCCCc
Confidence            4778888877321        122466666555 9999999999887553     3678888888888888877677999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.++.|++.|+.|+|+.+|.||||||.|+|++.+-
T Consensus       156 DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC  193 (449)
T KOG0664|consen  156 DHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC  193 (449)
T ss_pred             chhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc
Confidence            99999999999999999999999999999999997653

>KOG1164|consensus

Probab=99.53  E-value=3.2e-13  Score=88.64  Aligned_cols=103  Identities=15%  Similarity=0.230  Sum_probs=84.6

Q ss_pred             cEEEEEEeccc------cchhHHHHHhhhC---CCCCcceEEEEE-EcCCEEEEEecCCCCCHHHHHHhC--CCCCHHHH
Q psy14425          4 IVVVLEIMSRE------ASGNLLSAHYRLD---SHPHINSLHEVL-LGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEA   71 (114)
Q Consensus         4 ~~~avK~~~~~------~~~~e~~~~~~~~---~h~~i~~~~~~~-~~~~~~~~v~e~~~~~l~~~~~~~--~~~~~~~~   71 (114)
                      +.+|+|.-...      ....|...+..+.   ..+++..+++.+ ....+.++||+.+|.+|.++....  +.++..++
T Consensus        45 ~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~  124 (322)
T KOG1164|consen   45 KEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTV  124 (322)
T ss_pred             eeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHH
Confidence            46788876543      2345666666663   346899999999 588899999999999999988543  56999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.++.++|+.|++|||+||+|+++....
T Consensus       125 l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~  159 (322)
T KOG1164|consen  125 LRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS  159 (322)
T ss_pred             HHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC
Confidence            99999999999999999999999999999997653

>KOG1006|consensus

Probab=99.53  E-value=7.7e-15  Score=92.60  Aligned_cols=106  Identities=11%  Similarity=0.180  Sum_probs=84.7

Q ss_pred             CCcEEEEEEeccccchh-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHH-----hCCCCCHH
Q psy14425          2 AGIVVVLEIMSREASGN-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR-----QRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~-----~~~~~~~~   69 (114)
                      ||+..|||.+.....++       |++...+-.+.|||+++|+.....+.-|+.||.|..++..+-.     ...++++.
T Consensus        88 sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~  167 (361)
T KOG1006|consen   88 SGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPEN  167 (361)
T ss_pred             cCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHh
Confidence            68999999997655443       3444455568899999999998999999999999777766542     23568888


Q ss_pred             HHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~~  107 (114)
                      .+-.+.-..+.|+.||-.+ .++|||+||+|||++..+.
T Consensus       168 Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~  206 (361)
T KOG1006|consen  168 ILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGD  206 (361)
T ss_pred             hhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCC
Confidence            8888877888999999874 7999999999999977553

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.50  E-value=5.2e-13  Score=82.49  Aligned_cols=79  Identities=16%  Similarity=0.098  Sum_probs=62.5

Q ss_pred             hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy14425         17 GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDL   95 (114)
Q Consensus        17 ~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~l   95 (114)
                      ..|++++.++.++++++.++++    +..+++|||+ |.+|.+....       ....++.|++.++.++|.+|++|||+
T Consensus        49 ~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~GIvHrDL  117 (218)
T PRK12274         49 RREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCGVAHNDL  117 (218)
T ss_pred             HHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCcCccCCC
Confidence            4588888888666889999886    4478999999 7777654321       11346789999999999999999999


Q ss_pred             -CCCcEEEecCC
Q psy14425         96 -KLRKFVFCNAQ  106 (114)
Q Consensus        96 -k~~nil~~~~~  106 (114)
                       ||+|||++.++
T Consensus       118 ~kp~NILv~~~g  129 (218)
T PRK12274        118 AKEANWLVQEDG  129 (218)
T ss_pred             CCcceEEEcCCC
Confidence             79999997655

>KOG0670|consensus

Probab=99.50  E-value=6.6e-14  Score=95.21  Aligned_cols=106  Identities=18%  Similarity=0.215  Sum_probs=88.4

Q ss_pred             CcEEEEEEeccccc-----hhHHHHHhhhCCC-----CCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC---CCCHH
Q psy14425          3 GIVVVLEIMSREAS-----GNLLSAHYRLDSH-----PHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK---RLKEA   69 (114)
Q Consensus         3 ~~~~avK~~~~~~~-----~~e~~~~~~~~~h-----~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~---~~~~~   69 (114)
                      |..||||++.....     ..|+.+|.++...     -+.++++..|.-.+++|+|+|.+.-.|.+++.+.+   .+...
T Consensus       457 ~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ik  536 (752)
T KOG0670|consen  457 GQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIK  536 (752)
T ss_pred             CCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeeh
Confidence            67899999965431     2477788776221     27788888899999999999999888999997654   48889


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .+..|..|+..|+..|-..|++|.||||+|||+++....
T Consensus       537 aVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~i  575 (752)
T KOG0670|consen  537 AVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNI  575 (752)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcce
Confidence            999999999999999999999999999999999887654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.50  E-value=3.6e-13  Score=92.76  Aligned_cols=65  Identities=20%  Similarity=0.261  Sum_probs=53.7

Q ss_pred             CCEEEEEecCC-CCCHHHHHHhCC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         42 DKLAYLVFPPC-SGDLHSYVRQRK------------------------RLKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        42 ~~~~~~v~e~~-~~~l~~~~~~~~------------------------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      .+..|+|+||+ +++|.+++....                        .+++..+..++.|++.++.|+|.++++|||+|
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLK  336 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIK  336 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            35689999999 889988875311                        13456778899999999999999999999999


Q ss_pred             CCcEEEecCC
Q psy14425         97 LRKFVFCNAQ  106 (114)
Q Consensus        97 ~~nil~~~~~  106 (114)
                      |+||+++.++
T Consensus       337 p~NILl~~~~  346 (507)
T PLN03224        337 PENLLVTVDG  346 (507)
T ss_pred             hHhEEECCCC
Confidence            9999997654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.50  E-value=1.8e-14  Score=103.87  Aligned_cols=77  Identities=29%  Similarity=0.395  Sum_probs=65.4

Q ss_pred             CC-CCcceEEEEE-------EcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCC
Q psy14425         28 SH-PHINSLHEVL-------LGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLR   98 (114)
Q Consensus        28 ~h-~~i~~~~~~~-------~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~   98 (114)
                      .| +||..+++.|       .....++.++|+++++|.+++.. ...++...+..++.|++.|+.|+|++||+||||||+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~  109 (793)
T PLN00181         30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPS  109 (793)
T ss_pred             hHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCch
Confidence            55 5777788877       23346788899888899999965 345999999999999999999999999999999999


Q ss_pred             cEEEec
Q psy14425         99 KFVFCN  104 (114)
Q Consensus        99 nil~~~  104 (114)
                      |||++.
T Consensus       110 NiLl~~  115 (793)
T PLN00181        110 CFVMSS  115 (793)
T ss_pred             hEEEcc
Confidence            999964

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.48  E-value=1.1e-12  Score=82.92  Aligned_cols=98  Identities=15%  Similarity=0.176  Sum_probs=69.4

Q ss_pred             CcEEEEEEecccc-------------------chhHHHHHhhhCCCCCc--ceEEEEEEcC-C---EEEEEecCC-C-CC
Q psy14425          3 GIVVVLEIMSREA-------------------SGNLLSAHYRLDSHPHI--NSLHEVLLGD-K---LAYLVFPPC-S-GD   55 (114)
Q Consensus         3 ~~~~avK~~~~~~-------------------~~~e~~~~~~~~~h~~i--~~~~~~~~~~-~---~~~~v~e~~-~-~~   55 (114)
                      +..+++|.+.+..                   ...|...+..+ +++++  +.+++..... .   ..++++|++ + .+
T Consensus        55 ~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~  133 (239)
T PRK01723         55 GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVVRHGLFYRADILIERIEGARD  133 (239)
T ss_pred             CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCC
Confidence            5678888874321                   12366667777 66654  6666654332 2   235999999 4 58


Q ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         56 LHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        56 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |.+++.. ..++...    +.+++.++.++|++|++|+|++|.|||++.++
T Consensus       134 L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~  179 (239)
T PRK01723        134 LVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDG  179 (239)
T ss_pred             HHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC
Confidence            8888754 4455443    56889999999999999999999999997654

>KOG1025|consensus

Probab=99.48  E-value=3.2e-14  Score=100.75  Aligned_cols=102  Identities=24%  Similarity=0.257  Sum_probs=84.6

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +-+||+|.+......       +|.-++.++ +|||++++.+++..+. +-++++++ .|.|.++++.+ ..+.......
T Consensus       725 KipVaiKvl~~~t~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLn  802 (1177)
T KOG1025|consen  725 KIPVAIKVLIEFTSPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLN  802 (1177)
T ss_pred             cceeEEEEeeccCCchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHH
Confidence            357899988543211       345566777 9999999999987655 78899999 89999999764 4588899999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |..|++.||.|||.++++||||..+|+|+...+
T Consensus       803 w~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~  835 (1177)
T KOG1025|consen  803 WCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN  835 (1177)
T ss_pred             HHHHHHHHHHHHHhcchhhhhhhhhheeecCCC
Confidence            999999999999999999999999999996644

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.47  E-value=4.2e-13  Score=93.30  Aligned_cols=83  Identities=17%  Similarity=0.170  Sum_probs=68.4

Q ss_pred             hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         18 NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      .|...+..+ +|++++.+..++......+++|||+ +++|.+.+.        ....++.+++.++.++|+.+++|||+|
T Consensus       385 ~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlk  455 (535)
T PRK09605        385 AEARLLSEA-RRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLT  455 (535)
T ss_pred             HHHHHHHhh-cccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCC
Confidence            356666666 8999888777777777788999999 889988774        345688999999999999999999999


Q ss_pred             CCcEEEecCCccc
Q psy14425         97 LRKFVFCNAQRSV  109 (114)
Q Consensus        97 ~~nil~~~~~~~~  109 (114)
                      |+||+++++...+
T Consensus       456 p~NILl~~~~~~l  468 (535)
T PRK09605        456 TSNFIVRDDRLYL  468 (535)
T ss_pred             hHHEEEECCcEEE
Confidence            9999996555444

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.46  E-value=2.9e-13  Score=94.55  Aligned_cols=102  Identities=17%  Similarity=0.169  Sum_probs=67.4

Q ss_pred             CcEEEEEEeccccchhH--HHHHhhhCCCCCcceEEEE------EEcCCEEEEEecCC-CCCHHHHHHhCCC--------
Q psy14425          3 GIVVVLEIMSREASGNL--LSAHYRLDSHPHINSLHEV------LLGDKLAYLVFPPC-SGDLHSYVRQRKR--------   65 (114)
Q Consensus         3 ~~~~avK~~~~~~~~~e--~~~~~~~~~h~~i~~~~~~------~~~~~~~~~v~e~~-~~~l~~~~~~~~~--------   65 (114)
                      +..||+|.+........  ...+... .+.++..+...      ......+++++||+ +++|.+++.....        
T Consensus       161 ~~~vAvK~~~~~~~~e~~~~e~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l  239 (566)
T PLN03225        161 EGKYVLKKATEYGAVEIWMNERVRRA-CPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYL  239 (566)
T ss_pred             CcEEEEEEecccchhHHHHHHHHHhh-chhhHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHh
Confidence            78899998764332211  1111111 12222222111      13456799999999 8899988854321        


Q ss_pred             ------------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         66 ------------LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        66 ------------~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                                  .....+..++.|++.|+.|+|+++++||||||+|||++.+
T Consensus       240 ~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~  291 (566)
T PLN03225        240 LGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEG  291 (566)
T ss_pred             ccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCC
Confidence                        1123456789999999999999999999999999999853

>KOG1035|consensus

Probab=99.44  E-value=2.7e-13  Score=98.88  Aligned_cols=68  Identities=31%  Similarity=0.525  Sum_probs=54.3

Q ss_pred             EEEEEecCCCCCHHHHHHhCCCC--CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec-CCccccc
Q psy14425         44 LAYLVFPPCSGDLHSYVRQRKRL--KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN-AQRSVGH  111 (114)
Q Consensus        44 ~~~~v~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~-~~~~~~~  111 (114)
                      .+|+-||||..++.+.+.....+  .....|.++.++++|+.|+|++|++|||+||.||++++ ++.++||
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGD  740 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGD  740 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecc
Confidence            48999999955555444443444  47778999999999999999999999999999999965 4456765

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.42  E-value=2e-12  Score=79.45  Aligned_cols=77  Identities=13%  Similarity=0.090  Sum_probs=55.0

Q ss_pred             HHHHHhhhCCCC--CcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Q psy14425         19 LLSAHYRLDSHP--HINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDL   95 (114)
Q Consensus        19 e~~~~~~~~~h~--~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~l   95 (114)
                      |...+..+ .++  .++..++    .+..+++||++ ++++......      .....++.+++.++.++|+.|++|+|+
T Consensus        83 E~~~l~~l-~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl  151 (198)
T cd05144          83 EFAALKAL-YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDL  151 (198)
T ss_pred             HHHHHHHH-HHcCCCCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence            44445555 454  3444443    23458999999 7677654321      334567889999999999999999999


Q ss_pred             CCCcEEEecCC
Q psy14425         96 KLRKFVFCNAQ  106 (114)
Q Consensus        96 k~~nil~~~~~  106 (114)
                      +|+||+++.++
T Consensus       152 ~p~Nill~~~~  162 (198)
T cd05144         152 SEFNILVDDDE  162 (198)
T ss_pred             CcccEEEcCCC
Confidence            99999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.33  E-value=1.5e-11  Score=71.58  Aligned_cols=96  Identities=17%  Similarity=0.128  Sum_probs=74.4

Q ss_pred             CcEEEEEEecccc----chhHHHHHhhhCCC-CCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          3 GIVVVLEIMSREA----SGNLLSAHYRLDSH-PHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         3 ~~~~avK~~~~~~----~~~e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      +..+++|......    ...|...+..+.++ +++++++..+..++..++++|++ ++++...       +......+..
T Consensus        21 ~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~   93 (155)
T cd05120          21 DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIAE   93 (155)
T ss_pred             CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHHHHH
Confidence            3578899886553    44677777777333 68889888888888899999999 5555432       4556677888


Q ss_pred             HHHHHHHHHHHC---CCccCCCCCCcEEEecC
Q psy14425         77 QIAETVRACHAQ---GIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        77 ~~~~~l~~lh~~---~i~h~~lk~~nil~~~~  105 (114)
                      +++.++..+|..   +++|+|++|.|+++++.
T Consensus        94 ~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~  125 (155)
T cd05120          94 QLAELLAKLHQLPLLVLCHGDLHPGNILVDDG  125 (155)
T ss_pred             HHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence            999999999984   69999999999999873

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1166|consensus

Probab=99.32  E-value=3.7e-12  Score=92.37  Aligned_cols=103  Identities=22%  Similarity=0.237  Sum_probs=80.6

Q ss_pred             CcEEEEEEeccccchh---HHHHHhhh--CCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          3 GIVVVLEIMSREASGN---LLSAHYRL--DSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         3 ~~~~avK~~~~~~~~~---e~~~~~~~--~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      |+.+|+|.=+....+.   -.+++.++  .--+.+..+...+...+..++++||. .|+|.+++...+..++..+..+..
T Consensus       722 ~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~  801 (974)
T KOG1166|consen  722 GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSC  801 (974)
T ss_pred             CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHH
Confidence            6889999876554332   12222333  12234555566666778899999999 999999998777899999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      |++..++.+|..+|+|+||||+|+|+...
T Consensus       802 qml~ive~lH~~~IIHgDiKPDNfll~~~  830 (974)
T KOG1166|consen  802 QMLRIVEHLHAMGIIHGDIKPDNFLLRRE  830 (974)
T ss_pred             HHHHHHHHHHhcceecccCCcceeEeecc
Confidence            99999999999999999999999999653

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.31  E-value=1.1e-10  Score=74.76  Aligned_cols=101  Identities=24%  Similarity=0.378  Sum_probs=82.4

Q ss_pred             EEEEEEecccc---------chhHHHHHhhhCCCC-CcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---CCCHHH
Q psy14425          5 VVVLEIMSREA---------SGNLLSAHYRLDSHP-HINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---RLKEAE   70 (114)
Q Consensus         5 ~~avK~~~~~~---------~~~e~~~~~~~~~h~-~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---~~~~~~   70 (114)
                      .+|+|.+....         ..+|...+..+ .|+ +++++.+.+......+++++++ ++++.+.+....   .++...
T Consensus        24 ~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  102 (384)
T COG0515          24 LVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESE  102 (384)
T ss_pred             EEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHH
Confidence            46777774332         12345556666 665 7999999998888889999999 888887776554   689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..|++.++.++|..+++|||+||+|++++..+
T Consensus       103 ~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~  138 (384)
T COG0515         103 ALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG  138 (384)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC
Confidence            999999999999999999999999999999998765

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.29  E-value=4e-11  Score=72.83  Aligned_cols=61  Identities=20%  Similarity=0.274  Sum_probs=44.6

Q ss_pred             EEEEEecCC-CCCHH-HHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         44 LAYLVFPPC-SGDLH-SYVRQRKRLKEAEARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        44 ~~~~v~e~~-~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+++||++ ++++. ..+.... .. .....++.+++.++.++|. .+++|+|++|+||+++++.
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~~~~  152 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVDDGK  152 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEECCc
Confidence            358999999 53322 1111111 11 5677889999999999999 9999999999999998433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG4158|consensus

Probab=99.21  E-value=6.3e-11  Score=78.98  Aligned_cols=79  Identities=25%  Similarity=0.417  Sum_probs=66.3

Q ss_pred             hCCCCCcceEEEEEEc---------------------------CCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHH
Q psy14425         26 LDSHPHINSLHEVLLG---------------------------DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQI   78 (114)
Q Consensus        26 ~~~h~~i~~~~~~~~~---------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (114)
                      +..||||++++..|.+                           +..+|++|.....+|.+++.. ...+......++.|+
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~-~~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT-RHRSYRTGRVILAQL  350 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc-CCCchHHHHHHHHHH
Confidence            4689999999988832                           236899999888899999866 345666677889999


Q ss_pred             HHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         79 AETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        79 ~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      ++|+.|||..|+.|||+|.+|||+.-+
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~Eld  377 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELD  377 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEec
Confidence            999999999999999999999998443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.16  E-value=2.2e-10  Score=70.39  Aligned_cols=86  Identities=13%  Similarity=0.183  Sum_probs=60.0

Q ss_pred             HHHHHhhhCCC-CCcceEEEEEEcCCEEEEEecCCCCC-HH-HHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHCCCccCC
Q psy14425         19 LLSAHYRLDSH-PHINSLHEVLLGDKLAYLVFPPCSGD-LH-SYVRQRKRLKEAEARKLFRQIAETVRAC-HAQGIVLRD   94 (114)
Q Consensus        19 e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~v~e~~~~~-l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l-h~~~i~h~~   94 (114)
                      |...+.++... -+++.++++    ..-+++||+++++ +. ..+. ...++......+..+++.++..+ |..|++|+|
T Consensus        76 E~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGD  150 (197)
T cd05146          76 EMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHAD  150 (197)
T ss_pred             HHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            55566666333 467777765    4567899999542 22 1222 23455566677889999999988 899999999


Q ss_pred             CCCCcEEEecCCccc
Q psy14425         95 LKLRKFVFCNAQRSV  109 (114)
Q Consensus        95 lk~~nil~~~~~~~~  109 (114)
                      ++|.||++.++...+
T Consensus       151 Ls~~NIL~~~~~v~i  165 (197)
T cd05146         151 LSEYNMLWHDGKVWF  165 (197)
T ss_pred             CCHHHEEEECCcEEE
Confidence            999999998665443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.14  E-value=4e-10  Score=67.36  Aligned_cols=94  Identities=13%  Similarity=0.055  Sum_probs=62.8

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      |+.|++|......     .+.|...+..+.+...+++++....+  ..+++||++ +.++...     ..   .......
T Consensus        21 ~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~G~~l~~~-----~~---~~~~~~~   90 (170)
T cd05151          21 NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIEGSELLTE-----DF---SDPENLE   90 (170)
T ss_pred             CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecCCCccccc-----cc---cCHHHHH
Confidence            5789999975543     34566666665333334455655432  347899999 6555432     01   1123567


Q ss_pred             HHHHHHHHHHHCCC-----ccCCCCCCcEEEecCC
Q psy14425         77 QIAETVRACHAQGI-----VLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        77 ~~~~~l~~lh~~~i-----~h~~lk~~nil~~~~~  106 (114)
                      +++.++..+|..++     +|+|++|.|++++++.
T Consensus        91 ~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~~~  125 (170)
T cd05151          91 KIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDDGR  125 (170)
T ss_pred             HHHHHHHHHhCCCCCCceeecCCCCcCcEEEECCe
Confidence            88999999999885     9999999999998543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0590|consensus

Probab=99.13  E-value=3.1e-11  Score=84.87  Aligned_cols=80  Identities=28%  Similarity=0.365  Sum_probs=68.6

Q ss_pred             CCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         27 DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        27 ~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|+|++.....+.......-.||||..+|..++...+.+....+..+++|++.|+.|+|..|+.|||+||+|+++..++
T Consensus       378 l~h~~~~e~l~~~~~~~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g  457 (601)
T KOG0590|consen  378 LSHPNIIETLDIVQEIDGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG  457 (601)
T ss_pred             ccCCchhhhHHHHhhcccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC
Confidence            48999887766666555555559999449999997767899999999999999999999999999999999999998774

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.11  E-value=4.9e-09  Score=67.41  Aligned_cols=103  Identities=19%  Similarity=0.195  Sum_probs=70.3

Q ss_pred             CCcEEEEEEecccc-----------------chhHHHHHhhhCCC-CCcceEEEEEEc-----CCEEEEEecCCCC--CH
Q psy14425          2 AGIVVVLEIMSREA-----------------SGNLLSAHYRLDSH-PHINSLHEVLLG-----DKLAYLVFPPCSG--DL   56 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------------~~~e~~~~~~~~~h-~~i~~~~~~~~~-----~~~~~~v~e~~~~--~l   56 (114)
                      .|+.|.||......                 ...|...+.++... -..+.+..+++.     ....++++|++++  ++
T Consensus        44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL  123 (268)
T PRK15123         44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISL  123 (268)
T ss_pred             CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccH
Confidence            36788899663322                 23455555554111 123334444442     2357899999944  78


Q ss_pred             HHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         57 HSYVRQ--RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        57 ~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      .+++..  ....+......++.+++..+.-||.+|++|+|+++.|||++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        124 EDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHL  173 (268)
T ss_pred             HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEec
Confidence            888753  234556667789999999999999999999999999999975

>KOG1240|consensus

Probab=99.09  E-value=3e-11  Score=88.22  Aligned_cols=105  Identities=21%  Similarity=0.297  Sum_probs=84.7

Q ss_pred             EEEEEEeccccch-------hH-HHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          5 VVVLEIMSREASG-------NL-LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         5 ~~avK~~~~~~~~-------~e-~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      .+++|++-+....       ++ ..+...+.++||...+....++...-|++-+|...+|++.+..+.-+...+-+.++.
T Consensus        48 ~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaF  127 (1431)
T KOG1240|consen   48 LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAF  127 (1431)
T ss_pred             eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHH
Confidence            4889988544311       11 222355679999999887877888888899999889999997766577777788999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      |++.|+.-+|..|++|+|||.+|||++..+...
T Consensus       128 QLL~al~qcH~~gVcHGDIKsENILiTSWNW~~  160 (1431)
T KOG1240|consen  128 QLLKALSQCHKLGVCHGDIKSENILITSWNWLY  160 (1431)
T ss_pred             HHHHHHHHHHHcCccccccccceEEEeeechhh
Confidence            999999999999999999999999999887654

>KOG3087|consensus

Probab=99.05  E-value=4e-09  Score=64.06  Aligned_cols=91  Identities=11%  Similarity=0.157  Sum_probs=67.7

Q ss_pred             hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCC--CHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy14425         18 NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG--DLHSYVRQR--KRLKEAEARKLFRQIAETVRACHAQGIVLR   93 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~--~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~   93 (114)
                      +|...+.++ .--.|....-+|.+.+.-.+.|||+.|  ++.+++.+.  ..........++.++-..+.-||.++++|+
T Consensus        59 ~Ear~l~k~-~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHG  137 (229)
T KOG3087|consen   59 QEARLLAKC-RALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHG  137 (229)
T ss_pred             HHHHHHHHH-HHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecc
Confidence            366667776 444566556667777778899999955  777777553  223344446788888888999999999999


Q ss_pred             CCCCCcEEEecCCccc
Q psy14425         94 DLKLRKFVFCNAQRSV  109 (114)
Q Consensus        94 ~lk~~nil~~~~~~~~  109 (114)
                      ||..+||++.+++...
T Consensus       138 DLTTSNill~~~~~~~  153 (229)
T KOG3087|consen  138 DLTTSNILLRSDGNQI  153 (229)
T ss_pred             cccccceEEecCCCcC
Confidence            9999999997776544

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=1e-08  Score=62.16  Aligned_cols=83  Identities=13%  Similarity=0.131  Sum_probs=59.0

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL   97 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~   97 (114)
                      |..++.++ .--.|..+.=++.+.+...++|||+ |..+.+.+.+.   .    ..++..+-.-+.-||.+|++|+|+.+
T Consensus        49 Earil~~a-~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTt  120 (204)
T COG3642          49 EARILAKA-REAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTT  120 (204)
T ss_pred             HHHHHHHH-HHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCcc
Confidence            55556555 3334555555556777788999999 55666677553   1    34555666667889999999999999


Q ss_pred             CcEEEecCCccc
Q psy14425         98 RKFVFCNAQRSV  109 (114)
Q Consensus        98 ~nil~~~~~~~~  109 (114)
                      +|+++++++...
T Consensus       121 sNiIl~~~~i~~  132 (204)
T COG3642         121 SNIILSGGRIYF  132 (204)
T ss_pred             ceEEEeCCcEEE
Confidence            999998886544

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.91  E-value=4.6e-08  Score=60.67  Aligned_cols=89  Identities=19%  Similarity=0.199  Sum_probs=65.6

Q ss_pred             hHHHHHhhhCCC-CCcceEEEEEEcC----CEEEEEecCC-C-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q psy14425         18 NLLSAHYRLDSH-PHINSLHEVLLGD----KLAYLVFPPC-S-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGI   90 (114)
Q Consensus        18 ~e~~~~~~~~~h-~~i~~~~~~~~~~----~~~~~v~e~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i   90 (114)
                      .|...+..+.+. -..+.+..+.+..    ...++++|.+ + .+|.+++......+......++.+++..+.-||.+|+
T Consensus        60 ~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi  139 (206)
T PF06293_consen   60 REWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGI  139 (206)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcC
Confidence            355544444121 2355556665542    2468999999 4 4788888764446777778899999999999999999


Q ss_pred             ccCCCCCCcEEEecCC
Q psy14425         91 VLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        91 ~h~~lk~~nil~~~~~  106 (114)
                      +|+|++|.|||++.++
T Consensus       140 ~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  140 YHGDLNPSNILVDPDD  155 (206)
T ss_pred             CCCCCCcccEEEeCCC
Confidence            9999999999998876

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3741|consensus

Probab=98.90  E-value=1.5e-08  Score=69.65  Aligned_cols=104  Identities=22%  Similarity=0.322  Sum_probs=83.6

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEE----cCCEEEEEecCC--CCCHHHHHHh-------
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLL----GDKLAYLVFPPC--SGDLHSYVRQ-------   62 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~----~~~~~~~v~e~~--~~~l~~~~~~-------   62 (114)
                      +|..|++|.+..+..+      ...+.+.++ .|+|++++.++|.    .+..+++|++|.  .++|.++--.       
T Consensus       300 DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~  378 (655)
T KOG3741|consen  300 DGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKR  378 (655)
T ss_pred             CCceeeeeeeccccccCcccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccc
Confidence            4778899988444333      246677777 9999999999997    346799999998  6788876521       


Q ss_pred             --------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         63 --------RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        63 --------~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                              +...++..+|.++.|+..|+.++|+.|+.-+-+.|.+|+++.+.
T Consensus       379 ~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~  430 (655)
T KOG3741|consen  379 TNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKM  430 (655)
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcc
Confidence                    12367899999999999999999999998899999999998763

>KOG0603|consensus

Probab=98.89  E-value=1.3e-09  Score=75.62  Aligned_cols=107  Identities=19%  Similarity=0.271  Sum_probs=87.7

Q ss_pred             CCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      .|..||+|..++....        .|-..+....+||.+++++..|+++...++++++. +|.+...+.....+......
T Consensus        21 a~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~  100 (612)
T KOG0603|consen   21 AGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVA  100 (612)
T ss_pred             ccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHH
Confidence            3556777766443211        23444555556999999999999999999999999 88999888776778888899


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .+...++-+++++|+.++++||+|++||+++..|+-
T Consensus       101 ~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi  136 (612)
T KOG0603|consen  101 FYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHI  136 (612)
T ss_pred             HHHHHHHHHHhhcchhHHHHhcccccceeecccCcc
Confidence            999999999999999999999999999999888843

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.83  E-value=5.1e-08  Score=66.70  Aligned_cols=62  Identities=13%  Similarity=0.080  Sum_probs=43.3

Q ss_pred             CCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         42 DKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLFRQIAE-TVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        42 ~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ....+++|||+ |+++.+..... ...+.   ..+..+++. .+..+|..|++|+|++|.||++++++
T Consensus       230 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g  294 (437)
T TIGR01982       230 TSERVLTMEWIDGIPLSDIAALDEAGLDR---KALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDG  294 (437)
T ss_pred             cCCceEEEEeECCcccccHHHHHhcCCCH---HHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCC
Confidence            34578999999 88887765421 12222   234444444 36678999999999999999997665

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243|consensus

Probab=98.82  E-value=3.5e-08  Score=69.31  Aligned_cols=101  Identities=17%  Similarity=0.151  Sum_probs=77.2

Q ss_pred             CCcEEEEEEeccccch------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~~~------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~   75 (114)
                      ++.++.|..++...-.      +....++.+ +||+|+++++.++..+..|+|+|.+. .|..++..   +.......-+
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvTErV~-Pl~~~lk~---l~~~~v~~Gl  110 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVTERVR-PLETVLKE---LGKEEVCLGL  110 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEeeccc-cHHHHHHH---hHHHHHHHHH
Confidence            4667788887655431      234455566 99999999999999999999999883 24444443   2255566678


Q ss_pred             HHHHHHHHHHH-HCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACH-AQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh-~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|++.|+.||| .++++|+++.-..++++..+.
T Consensus       111 ~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge  143 (690)
T KOG1243|consen  111 FQILAALSFLNDDCNLVHGNVCKDSVFVNESGE  143 (690)
T ss_pred             HHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc
Confidence            99999999997 578999999999999987664

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.78  E-value=2.1e-08  Score=61.39  Aligned_cols=86  Identities=17%  Similarity=0.176  Sum_probs=52.1

Q ss_pred             HHHHHhhhCCCC-CcceEEEEEEcCCEEEEEecCCC--CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHHCCCccCC
Q psy14425         19 LLSAHYRLDSHP-HINSLHEVLLGDKLAYLVFPPCS--GDLHSYVRQRKRLKEAEARKLFRQIAETVRA-CHAQGIVLRD   94 (114)
Q Consensus        19 e~~~~~~~~~h~-~i~~~~~~~~~~~~~~~v~e~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-lh~~~i~h~~   94 (114)
                      |...|.++.... ++++++++-    .-.++|||++  |.....+.... ++......++.+++..+.. +|..|++|+|
T Consensus        58 E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGD  132 (188)
T PF01163_consen   58 EFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGD  132 (188)
T ss_dssp             HHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS
T ss_pred             HHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecC
Confidence            566677774442 677777553    2369999995  64443333311 2234455667777775554 5799999999


Q ss_pred             CCCCcEEEecCCccc
Q psy14425         95 LKLRKFVFCNAQRSV  109 (114)
Q Consensus        95 lk~~nil~~~~~~~~  109 (114)
                      +++.||++++++..+
T Consensus       133 Ls~~NIlv~~~~~~i  147 (188)
T PF01163_consen  133 LSEYNILVDDGKVYI  147 (188)
T ss_dssp             -STTSEEEETTCEEE
T ss_pred             CChhhEEeecceEEE
Confidence            999999998875544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.78  E-value=6.3e-08  Score=67.57  Aligned_cols=72  Identities=14%  Similarity=0.158  Sum_probs=45.1

Q ss_pred             CCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHH--HhCCC----CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCc
Q psy14425         28 SHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYV--RQRKR----LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRK   99 (114)
Q Consensus        28 ~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~--~~~~~----~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~n   99 (114)
                      .+.+.+.+.+++.+ ....+++|||+ |+++.+.-  ...+.    +....+..++.|+       ...|++|+|++|.|
T Consensus       218 ~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGN  290 (537)
T PRK04750        218 EDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGN  290 (537)
T ss_pred             cCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHH
Confidence            34444444444432 34578999999 78887642  22221    3333344444443       35899999999999


Q ss_pred             EEEecCC
Q psy14425        100 FVFCNAQ  106 (114)
Q Consensus       100 il~~~~~  106 (114)
                      |+++.++
T Consensus       291 Ilv~~~g  297 (537)
T PRK04750        291 IFVSYDP  297 (537)
T ss_pred             eEEecCC
Confidence            9998775

>KOG1024|consensus

Probab=98.74  E-value=1e-07  Score=63.80  Aligned_cols=79  Identities=20%  Similarity=0.412  Sum_probs=64.9

Q ss_pred             CCCCCcceEEEEEE-cCCEEEEEecCC-CCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         27 DSHPHINSLHEVLL-GDKLAYLVFPPC-SGDLHSYVRQR--------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        27 ~~h~~i~~~~~~~~-~~~~~~~v~e~~-~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      ..|||+.++.++.. +....+..+.+. .|.|..++.-+        ..++..+...++.|++.|+.|+|..+++|.||.
T Consensus       344 ~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiA  423 (563)
T KOG1024|consen  344 ASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIA  423 (563)
T ss_pred             CcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhh
Confidence            37999999987764 555667777777 78899888621        126777888899999999999999999999999


Q ss_pred             CCcEEEecC
Q psy14425         97 LRKFVFCNA  105 (114)
Q Consensus        97 ~~nil~~~~  105 (114)
                      .+|+++++.
T Consensus       424 aRNCvIdd~  432 (563)
T KOG1024|consen  424 ARNCVIDDQ  432 (563)
T ss_pred             hhcceehhh
Confidence            999999764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.59  E-value=2.5e-07  Score=55.51  Aligned_cols=47  Identities=21%  Similarity=0.220  Sum_probs=41.5

Q ss_pred             CCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         54 GDLHSYVRQR-KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        54 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |+|.+++... ..+++..++.++.|++.|+.|+|+++      ||+||+++.++
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~   48 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDG   48 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCcc
Confidence            6888888763 45999999999999999999999998      99999997654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1023|consensus

Probab=98.46  E-value=6.6e-07  Score=61.66  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=71.3

Q ss_pred             CCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCcEEEe
Q psy14425         27 DSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLFRQIAETVRACHAQGI-VLRDLKLRKFVFC  103 (114)
Q Consensus        27 ~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~lh~~~i-~h~~lk~~nil~~  103 (114)
                      ..|.|+.++.+.+.++...+.+.++| .|+|.+.+.. ...+++.....+++.++.|+.|+|.-.+ .|+.+++.|++++
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd   83 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVD   83 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceee
Confidence            38999999999999999999999999 8999999975 3458888888999999999999998766 8999999999997


Q ss_pred             cCC
Q psy14425        104 NAQ  106 (114)
Q Consensus       104 ~~~  106 (114)
                      ...
T Consensus        84 ~~w   86 (484)
T KOG1023|consen   84 SRW   86 (484)
T ss_pred             eeE
Confidence            643

>KOG0195|consensus

Probab=98.31  E-value=8e-07  Score=57.32  Aligned_cols=82  Identities=16%  Similarity=0.137  Sum_probs=69.7

Q ss_pred             hhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCc
Q psy14425         25 RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR--LKEAEARKLFRQIAETVRACHAQG--IVLRDLKLRK   99 (114)
Q Consensus        25 ~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~n   99 (114)
                      +++.||||..+.+.+.++-.+.++..|+ .|+|+..+.....  .+..++..++..++.|+.|+|+..  +..-.+....
T Consensus       242 rifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~h  321 (448)
T KOG0195|consen  242 RIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKH  321 (448)
T ss_pred             eeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccce
Confidence            4569999999999999999999999999 8999999966543  678889999999999999999964  4445688889


Q ss_pred             EEEecCC
Q psy14425        100 FVFCNAQ  106 (114)
Q Consensus       100 il~~~~~  106 (114)
                      ++++++.
T Consensus       322 vmidedl  328 (448)
T KOG0195|consen  322 VMIDEDL  328 (448)
T ss_pred             EEecchh
Confidence            9987754

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.31  E-value=3.6e-06  Score=54.16  Aligned_cols=80  Identities=20%  Similarity=0.181  Sum_probs=56.0

Q ss_pred             HHHHHhhhCCC-CCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         19 LLSAHYRLDSH-PHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        19 e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      |.+.|.++... -.+++.+++    +.-.++||++ +..|...     ++.......++..++..+.-.-..|++|+|++
T Consensus       159 Ef~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlS  229 (304)
T COG0478         159 EFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLS  229 (304)
T ss_pred             HHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCc
Confidence            56667766333 256666544    6778999999 5455432     12355556666777777777779999999999


Q ss_pred             CCcEEEecCCc
Q psy14425         97 LRKFVFCNAQR  107 (114)
Q Consensus        97 ~~nil~~~~~~  107 (114)
                      +-||++++++.
T Consensus       230 efNIlV~~dg~  240 (304)
T COG0478         230 EFNILVTEDGD  240 (304)
T ss_pred             hheEEEecCCC
Confidence            99999988754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.26  E-value=8.1e-06  Score=50.53  Aligned_cols=56  Identities=13%  Similarity=0.049  Sum_probs=34.7

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCC-CCCcceEEEEEEcC---CEEEEEecCC-CCCHHH
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDS-HPHINSLHEVLLGD---KLAYLVFPPC-SGDLHS   58 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~-h~~i~~~~~~~~~~---~~~~~v~e~~-~~~l~~   58 (114)
                      |+.+++|......       ...|...+..+.. +.++.+++.+....   +..+++||++ +.++.+
T Consensus        22 g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~   89 (223)
T cd05154          22 GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRD   89 (223)
T ss_pred             CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCC
Confidence            4789999875432       2346666666523 23466677666543   2568999999 555543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.24  E-value=9.2e-06  Score=51.72  Aligned_cols=86  Identities=16%  Similarity=0.148  Sum_probs=55.4

Q ss_pred             HHHHHhhhCCC-CCcceEEEEEEcCCEEEEEecCCCCC--HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCC
Q psy14425         19 LLSAHYRLDSH-PHINSLHEVLLGDKLAYLVFPPCSGD--LHSYVRQRKRLKEAEARKLFRQIAETVRACHA-QGIVLRD   94 (114)
Q Consensus        19 e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~v~e~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~   94 (114)
                      |...|.++.+. -.+++.+.++.    -.++|||++..  -...++. -++....+..+..+++..+.-|-. .+++|+|
T Consensus       118 Ef~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgD  192 (268)
T COG1718         118 EFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGD  192 (268)
T ss_pred             HHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCccccc
Confidence            44455554232 45666666654    35999999443  2222222 123333567777888888888777 8999999


Q ss_pred             CCCCcEEEecCCccc
Q psy14425         95 LKLRKFVFCNAQRSV  109 (114)
Q Consensus        95 lk~~nil~~~~~~~~  109 (114)
                      |+.-|||+.++...+
T Consensus       193 LSEyNiL~~~~~p~i  207 (268)
T COG1718         193 LSEYNILVHDGEPYI  207 (268)
T ss_pred             chhhheEEECCeEEE
Confidence            999999999655443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.22  E-value=1.9e-06  Score=55.94  Aligned_cols=64  Identities=28%  Similarity=0.414  Sum_probs=43.4

Q ss_pred             EEEEecCCCCCHHHHHHh---CCC----CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         45 AYLVFPPCSGDLHSYVRQ---RKR----LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        45 ~~~v~e~~~~~l~~~~~~---~~~----~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .+++|.-+.++|.+++..   ...    +....-..+..|++..+.++|..|++|+|++|+|++++.++.-
T Consensus       114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v  184 (288)
T PF14531_consen  114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGV  184 (288)
T ss_dssp             EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-E
T ss_pred             hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCE
Confidence            366777778888887642   111    2222234556889999999999999999999999999887653

>KOG0590|consensus

Probab=98.19  E-value=2.9e-07  Score=65.22  Aligned_cols=88  Identities=16%  Similarity=0.209  Sum_probs=74.4

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-HCCCccCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYV-RQRK-RLKEAEARKLFRQIAETVRACH-AQGIVLRD   94 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~lh-~~~i~h~~   94 (114)
                      |......+.+|+|++..++........++.+++. ++++...+ .... ..+......++.|+..++.|+| ..++.|+|
T Consensus        70 e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~  149 (601)
T KOG0590|consen   70 ETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRD  149 (601)
T ss_pred             cccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCC
Confidence            3444445545999999999999999999999999 88888877 4433 5777888899999999999999 99999999


Q ss_pred             CCCCcEEEecCC
Q psy14425         95 LKLRKFVFCNAQ  106 (114)
Q Consensus        95 lk~~nil~~~~~  106 (114)
                      ++|+|.+++..+
T Consensus       150 ikP~n~~l~~s~  161 (601)
T KOG0590|consen  150 IKPSNSLLDESG  161 (601)
T ss_pred             CCCccchhccCC
Confidence            999999997765

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.18  E-value=6e-06  Score=51.73  Aligned_cols=60  Identities=18%  Similarity=0.259  Sum_probs=44.2

Q ss_pred             CCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccc
Q psy14425         42 DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        42 ~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      ....+++|||+ |..+.+...    +++    .+...+..++.-+|..|+.|+|..|.|+++++++..+
T Consensus       115 ~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~i~i  175 (229)
T PF06176_consen  115 TSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNGIRI  175 (229)
T ss_pred             eeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCcEEE
Confidence            34577999999 666654421    222    2334566778899999999999999999999877654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0601|consensus

Probab=98.16  E-value=1.3e-06  Score=60.54  Aligned_cols=87  Identities=18%  Similarity=0.157  Sum_probs=69.0

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCC
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL   97 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~   97 (114)
                      |..+...+.-|.+++..+..+..-...++-.||+ +++..........+.+...+.+..|++.++.++|++.++|+|++|
T Consensus       315 ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~p  394 (524)
T KOG0601|consen  315 EVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKP  394 (524)
T ss_pred             hhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccc
Confidence            4444555667888888877777767777999999 777665553333467777788899999999999999999999999


Q ss_pred             CcEEEecC
Q psy14425         98 RKFVFCNA  105 (114)
Q Consensus        98 ~nil~~~~  105 (114)
                      +||++.++
T Consensus       395 sni~i~~~  402 (524)
T KOG0601|consen  395 SNILISND  402 (524)
T ss_pred             cceeeccc
Confidence            99999773

>PRK09902 hypothetical protein; Provisional

Probab=98.14  E-value=4e-05  Score=47.82  Aligned_cols=87  Identities=9%  Similarity=0.035  Sum_probs=62.5

Q ss_pred             hHHHHHhhhC--CCCCcceEEEEEE-c----CCEEEEEecCCC--CCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH
Q psy14425         18 NLLSAHYRLD--SHPHINSLHEVLL-G----DKLAYLVFPPCS--GDLHSYVRQR--KRLKEAEARKLFRQIAETVRACH   86 (114)
Q Consensus        18 ~e~~~~~~~~--~h~~i~~~~~~~~-~----~~~~~~v~e~~~--~~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~lh   86 (114)
                      .|...+.++.  +-| ++++. ++. .    .-.-.+|+|-++  .+|.+++...  .+.+...-..+..+++..+.-||
T Consensus        68 rE~~~L~~L~~~GvP-VP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH  145 (216)
T PRK09902         68 REVAVIKELERAGVI-VPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH  145 (216)
T ss_pred             HHHHHHHHHHHcCCC-CCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH
Confidence            4766666552  223 55554 222 1    224778999884  6998887553  23566666788999999999999


Q ss_pred             HCCCccCCCCCCcEEEecCC
Q psy14425         87 AQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        87 ~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|+.|+|+.+.||+++..+
T Consensus       146 ~~Gv~Hgdly~khIll~~~g  165 (216)
T PRK09902        146 SVNRQHGCCYVRHIYVKTEG  165 (216)
T ss_pred             HCCCcCCCCCHhheeecCCC
Confidence            99999999999999997544

>KOG1266|consensus

Probab=98.12  E-value=3.1e-06  Score=55.89  Aligned_cols=83  Identities=17%  Similarity=0.250  Sum_probs=68.4

Q ss_pred             HhhhCCCCCcceEEEEEEcC-----CEEEEEecCC-CCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC--C
Q psy14425         23 HYRLDSHPHINSLHEVLLGD-----KLAYLVFPPC-SGDLHSYVRQ----RKRLKEAEARKLFRQIAETVRACHAQG--I   90 (114)
Q Consensus        23 ~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~l~~lh~~~--i   90 (114)
                      +.++ -|.|+++++.++-+.     ....+++||+ .|++.+++++    +..+.......|+-|++.|+.|||+..  +
T Consensus       121 llql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi  199 (458)
T KOG1266|consen  121 LLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI  199 (458)
T ss_pred             HHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence            3445 799999998887543     4588999999 8999999964    235888889999999999999999975  8


Q ss_pred             ccCCCCCCcEEEecCC
Q psy14425         91 VLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        91 ~h~~lk~~nil~~~~~  106 (114)
                      +|+++..+.+++..++
T Consensus       200 ihgnlTc~tifiq~ng  215 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNG  215 (458)
T ss_pred             ccCCcchhheeecCCc
Confidence            9999999999987544

>KOG0601|consensus

Probab=98.02  E-value=4.4e-06  Score=58.02  Aligned_cols=104  Identities=16%  Similarity=0.180  Sum_probs=82.3

Q ss_pred             CCcEEEEEEecc--c------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSR--E------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~--~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      ++..+|+|.-+.  .      ...++.....+...|++.++.+..++.++..++-+|.++.++..+.... ..++...++
T Consensus       142 s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~  221 (524)
T KOG0601|consen  142 SPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLW  221 (524)
T ss_pred             CCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhh
Confidence            355677776321  1      1223555555666788999988889999999999999998888887543 348888999


Q ss_pred             HHHHHHHH----HHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         73 KLFRQIAE----TVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        73 ~~~~~~~~----~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      ..+.+...    |+.++|..+++|-|++|.|++...+
T Consensus       222 ~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~  258 (524)
T KOG0601|consen  222 NSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSD  258 (524)
T ss_pred             hHHhhhhhcccccccccCCCcccccccchhheecccc
Confidence            99999888    9999999999999999999999666

>KOG1033|consensus

Probab=97.87  E-value=4.3e-06  Score=57.59  Aligned_cols=65  Identities=26%  Similarity=0.525  Sum_probs=54.4

Q ss_pred             EEEEEecCC-CCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         44 LAYLVFPPC-SGDLHSYVRQRK---RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        44 ~~~~v~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                      ++++.|++| ..+|.+++....   ..+......++.|+..++.|   ++.+|+|+||.||.+..+. .++||
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgD  399 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGD  399 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhh
Confidence            588999999 889999995322   36777888999999999999   9999999999999996554 66665

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.71  E-value=0.0023  Score=39.68  Aligned_cols=74  Identities=24%  Similarity=0.268  Sum_probs=55.2

Q ss_pred             CCCCcceEEEEEEcCCEEEEEecCC---CC----CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcE
Q psy14425         28 SHPHINSLHEVLLGDKLAYLVFPPC---SG----DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKF  100 (114)
Q Consensus        28 ~h~~i~~~~~~~~~~~~~~~v~e~~---~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~ni  100 (114)
                      .+.++.++++..+++...-+++|.+   .|    +|.+++.. +.++. ..   ...+-.-..|+-..+|+.+|++|.||
T Consensus        75 ~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NI  149 (199)
T PF10707_consen   75 DWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNI  149 (199)
T ss_pred             cccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HH---HHHHHHHHHHHHHcCCeecCCCcccE
Confidence            4779999999999999999999976   23    66677643 44554 22   33334446778899999999999999


Q ss_pred             EEecCC
Q psy14425        101 VFCNAQ  106 (114)
Q Consensus       101 l~~~~~  106 (114)
                      ++....
T Consensus       150 v~~~~~  155 (199)
T PF10707_consen  150 VVQRRD  155 (199)
T ss_pred             EEEecC
Confidence            995544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.62  E-value=0.0016  Score=45.83  Aligned_cols=64  Identities=11%  Similarity=0.088  Sum_probs=40.9

Q ss_pred             CCEEEEEecCC-CCCHHHHH--HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         42 DKLAYLVFPPC-SGDLHSYV--RQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        42 ~~~~~~v~e~~-~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .+.-.++|||+ |-.+.+..  ++ ...+...+...+.+..  +.-+-..|++|.|..|.|++++.++.-
T Consensus       238 t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~~g~i  304 (517)
T COG0661         238 TTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDGFFHADPHPGNILVRSDGRI  304 (517)
T ss_pred             cCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCccceEEecCCcE
Confidence            45678999999 66777764  33 4455333333222221  222334799999999999999887543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.58  E-value=0.0023  Score=40.51  Aligned_cols=55  Identities=11%  Similarity=-0.022  Sum_probs=37.9

Q ss_pred             CcEEEEEEeccc---cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHH
Q psy14425          3 GIVVVLEIMSRE---ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLH   57 (114)
Q Consensus         3 ~~~~avK~~~~~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~   57 (114)
                      +..+.+|.....   ....|...+..+..+..+++++.+....+..+++||++ |.++.
T Consensus        22 ~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150          22 NPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             CCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            356778877653   45567777766644555667788777666788999999 55554

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.24  E-value=0.012  Score=37.25  Aligned_cols=52  Identities=10%  Similarity=-0.001  Sum_probs=35.1

Q ss_pred             CcEEEEEEeccc----cchhHHHHHhhhCCCC-CcceEEEEEEcCCEEEEEecCCCC
Q psy14425          3 GIVVVLEIMSRE----ASGNLLSAHYRLDSHP-HINSLHEVLLGDKLAYLVFPPCSG   54 (114)
Q Consensus         3 ~~~~avK~~~~~----~~~~e~~~~~~~~~h~-~i~~~~~~~~~~~~~~~v~e~~~~   54 (114)
                      |..+++|.....    ...+|.+.+..+.... .+++++++...++...++||++.|
T Consensus        22 ~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172        22 TGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            446778887543    2445777776663332 357778888788888999999944

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG2270|consensus

Probab=97.14  E-value=0.0034  Score=42.87  Aligned_cols=64  Identities=19%  Similarity=0.230  Sum_probs=44.9

Q ss_pred             EEEEecCCCCCH--HHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCCCcEEEecCCccc
Q psy14425         45 AYLVFPPCSGDL--HSYVRQRKRLKEAEARKLFRQIAETVRACH-AQGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        45 ~~~v~e~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      -.+||+|+|.+=  ...+ +...++...+..+-.+++.-|.-|. .++++|.||+--|+|+.++..-+
T Consensus       239 hVLVM~FlGrdgw~aPkL-Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG~lyi  305 (520)
T KOG2270|consen  239 HVLVMEFLGRDGWAAPKL-KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDGKLYI  305 (520)
T ss_pred             ceEeeeeccCCCCcCccc-ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEECCEEEE
Confidence            468999995322  2222 2234666677777777777777665 47999999999999998876544

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.94  E-value=0.0056  Score=37.63  Aligned_cols=85  Identities=15%  Similarity=0.035  Sum_probs=60.9

Q ss_pred             HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHH---HHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CCc
Q psy14425         19 LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSY---VRQRKRLKEAEARKLFRQIAETVRACHAQ---GIV   91 (114)
Q Consensus        19 e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~l~~lh~~---~i~   91 (114)
                      |.-.+..+.+.++++++++.+-    ..++.|+. .+++...   +......++.....++.++++.+.+++..   .+.
T Consensus         9 E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    9 EPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             HHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            4445555544469999999973    35688988 4555321   11223468899999999999999999873   466


Q ss_pred             cCCCCCCcEEEecCCc
Q psy14425         92 LRDLKLRKFVFCNAQR  107 (114)
Q Consensus        92 h~~lk~~nil~~~~~~  107 (114)
                      ..|++|+|+-++++++
T Consensus        85 lcDv~~~nfgv~~~~~  100 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGR  100 (188)
T ss_pred             EeecchHHeEEeCCCc
Confidence            7999999999987643

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0606|consensus

Probab=96.52  E-value=0.0024  Score=48.20  Aligned_cols=46  Identities=26%  Similarity=0.327  Sum_probs=33.7

Q ss_pred             CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        54 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      |+..+.++.-+.+|...        +.+++|+|.-|++|||+||+|.+++.-++
T Consensus       136 gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGh  181 (1205)
T KOG0606|consen  136 GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGH  181 (1205)
T ss_pred             chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeeccc
Confidence            44555544334444332        67899999999999999999999977654

>KOG1235|consensus

Probab=96.28  E-value=0.017  Score=40.99  Aligned_cols=69  Identities=7%  Similarity=0.001  Sum_probs=40.5

Q ss_pred             cceEEEEEEcCCEEEEEecCC-CCCHHHHH--HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         32 INSLHEVLLGDKLAYLVFPPC-SGDLHSYV--RQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        32 i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      |++++..+  .....++|||+ |..+.+.-  .+. .++...+..-+.+...-  -+=..|++|.|-.|.||++..+
T Consensus       266 VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~~~--qIf~~GffHaDPHPGNilv~~~  337 (538)
T KOG1235|consen  266 VPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAYLE--QIFKTGFFHADPHPGNILVRPN  337 (538)
T ss_pred             CCeehhhc--CcceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHHHH--HHHhcCCccCCCCCCcEEEecC
Confidence            44444333  23578999999 66655543  343 34444433333222111  1234679999999999999853

>KOG1035|consensus

Probab=95.35  E-value=0.0064  Score=46.56  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=31.7

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCC
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDK   43 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~   43 (114)
                      -|+.||||++.....       .+|+..+.++ +||||+++|..+....
T Consensus       503 DGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  503 DGREYAIKKIPLKASDKLYSKILREVKLLARL-NHPNVVRYYSAWVEST  550 (1351)
T ss_pred             cchhhhhhhccCchHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccC
Confidence            488999999965432       2478888999 9999999988875443

>KOG0606|consensus

Probab=95.18  E-value=0.0055  Score=46.36  Aligned_cols=80  Identities=19%  Similarity=0.131  Sum_probs=61.1

Q ss_pred             CCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         28 SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        28 ~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+|.++.....|......++++++. ++++...+...+..+..-+..+...+....++||...+.|+|++|.|.+....+
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~g  941 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDG  941 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccC
Confidence            3455554444455667899999999 788888876656566666667777788899999999999999999999986554


Q ss_pred             c
Q psy14425        107 R  107 (114)
Q Consensus       107 ~  107 (114)
                      .
T Consensus       942 h  942 (1205)
T KOG0606|consen  942 H  942 (1205)
T ss_pred             C
Confidence            3

>PRK10593 hypothetical protein; Provisional

Probab=94.88  E-value=0.46  Score=31.33  Aligned_cols=53  Identities=6%  Similarity=-0.126  Sum_probs=34.1

Q ss_pred             cEEEEEEeccc----cchhHHHHHhhhCCC--CCcceEEEEEEc---CCEEEEEecCC-CCCH
Q psy14425          4 IVVVLEIMSRE----ASGNLLSAHYRLDSH--PHINSLHEVLLG---DKLAYLVFPPC-SGDL   56 (114)
Q Consensus         4 ~~~avK~~~~~----~~~~e~~~~~~~~~h--~~i~~~~~~~~~---~~~~~~v~e~~-~~~l   56 (114)
                      ..+.+|..+..    ....|...+..+.+.  ..++++++.+..   .+..+++||++ +.++
T Consensus        38 ~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         38 GNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             CCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence            34666775442    344677767666443  367788877653   36689999999 5444

>PHA03111 Ser/Thr kinase; Provisional

Probab=94.58  E-value=0.37  Score=32.89  Aligned_cols=43  Identities=16%  Similarity=0.147  Sum_probs=29.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHH----CCCccCCCCCCcEEEecCCccc
Q psy14425         67 KEAEARKLFRQIAETVRACHA----QGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~----~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      -...++.++.|++--.-.+..    .+.+|-||||+|||+-+...++
T Consensus       277 ~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i  323 (444)
T PHA03111        277 LVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPI  323 (444)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcE
Confidence            345566777787654433433    3589999999999996665443

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.20  E-value=0.4  Score=33.18  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=51.3

Q ss_pred             CCCCcceEEEEE-EcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecC
Q psy14425         28 SHPHINSLHEVL-LGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        28 ~h~~i~~~~~~~-~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~  105 (114)
                      +.++..+.+-+- ....+.|++|++.|+++.-.    .--...+...++.+.+..+.-+..+ ..-||++.-.||+++++
T Consensus       283 g~~~~e~~~vv~~de~~y~yl~~kdhgt~is~i----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId~G  358 (488)
T COG5072         283 GSVFLETLKVVSLDETLYLYLHFKDHGTPISII----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILIDEG  358 (488)
T ss_pred             cchhhhcceEEecCCceEEEEEEecCCceeeee----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeeecC
Confidence            344444443333 23456788888877766432    2245566777777776666555544 47899999999999987


Q ss_pred             Ccccc
Q psy14425        106 QRSVG  110 (114)
Q Consensus       106 ~~~~~  110 (114)
                      +.++.
T Consensus       359 nvtLI  363 (488)
T COG5072         359 NVTLI  363 (488)
T ss_pred             ceEEE
Confidence            77653

>PLN02876 acyl-CoA dehydrogenase

Probab=93.51  E-value=0.5  Score=35.60  Aligned_cols=51  Identities=14%  Similarity=0.080  Sum_probs=32.1

Q ss_pred             cEEEEEEeccc-------cchhHHHHHhhhCCCCCc--ceEEEEEEcC---CEEEEEecCCCC
Q psy14425          4 IVVVLEIMSRE-------ASGNLLSAHYRLDSHPHI--NSLHEVLLGD---KLAYLVFPPCSG   54 (114)
Q Consensus         4 ~~~avK~~~~~-------~~~~e~~~~~~~~~h~~i--~~~~~~~~~~---~~~~~v~e~~~~   54 (114)
                      ..+++|.....       ....|...+..+.+|+++  ++++.++.+.   +..+++||++.|
T Consensus        66 ~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G  128 (822)
T PLN02876         66 KRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEG  128 (822)
T ss_pred             eeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCC
Confidence            35777776432       234577777766445544  6777766543   457899999944

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=93.27  E-value=1.3  Score=27.89  Aligned_cols=27  Identities=33%  Similarity=0.533  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEE
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFV  101 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil  101 (114)
                      +.++..-+..+|..|++-+|+++.|..
T Consensus       170 ~~~~~~dl~~~~k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  170 IPQMLRDLKILHKLGIVPRDVKPRNYR  196 (207)
T ss_pred             HHHHHHHHHHHHHCCeeeccCcccccc
Confidence            355667788899999999999999974

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=92.84  E-value=0.54  Score=32.20  Aligned_cols=43  Identities=16%  Similarity=0.174  Sum_probs=27.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHH----CCCccCCCCCCcEEEecCCccc
Q psy14425         67 KEAEARKLFRQIAETVRACHA----QGIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~----~~i~h~~lk~~nil~~~~~~~~  109 (114)
                      -...++.++.|++--.--+..    .+.+|-||||+|||+-+....+
T Consensus       273 ~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i  319 (434)
T PF05445_consen  273 NVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPI  319 (434)
T ss_pred             HHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCce
Confidence            344556667776433211322    3589999999999996655543

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.24  E-value=1.7  Score=26.74  Aligned_cols=56  Identities=13%  Similarity=0.045  Sum_probs=31.9

Q ss_pred             CcEEEEEEeccc----cchhHHHHHhhhCCC-CCcceEEEEEE---cCCEEEEEecCC-CCCHHH
Q psy14425          3 GIVVVLEIMSRE----ASGNLLSAHYRLDSH-PHINSLHEVLL---GDKLAYLVFPPC-SGDLHS   58 (114)
Q Consensus         3 ~~~~avK~~~~~----~~~~e~~~~~~~~~h-~~i~~~~~~~~---~~~~~~~v~e~~-~~~l~~   58 (114)
                      +..+++|.....    ....|...+..+.++ ..+.+++....   .....+.+|+++ +.++..
T Consensus        20 ~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   20 DGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             TSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             CcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            358899988665    233455555444233 23556665432   334578999999 555555

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=91.62  E-value=0.5  Score=30.94  Aligned_cols=19  Identities=11%  Similarity=0.352  Sum_probs=16.2

Q ss_pred             CCCccCCCCCCcEEEecCC
Q psy14425         88 QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~~  106 (114)
                      .+++|+|+.+.|++++++.
T Consensus       187 ~~liHgD~~~~Nil~~~~~  205 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKDNE  205 (313)
T ss_pred             CceEcCCCCcccEEEeCCc
Confidence            4689999999999998744

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG0576|consensus

Probab=91.47  E-value=0.057  Score=39.42  Aligned_cols=87  Identities=13%  Similarity=0.165  Sum_probs=56.8

Q ss_pred             HHHHHhhhCCCCC-cceEEEEEEcCCEEEEEecCC-CC-CHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy14425         19 LLSAHYRLDSHPH-INSLHEVLLGDKLAYLVFPPC-SG-DLHSYV-RQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD   94 (114)
Q Consensus        19 e~~~~~~~~~h~~-i~~~~~~~~~~~~~~~v~e~~-~~-~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~   94 (114)
                      +++.|.++ +||| .+..++.+......++.++++ ++ +..... ...-.+...+.......-..++.++|+..=+|+|
T Consensus       283 ~~eLLdK~-n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d  361 (829)
T KOG0576|consen  283 AIELLDKV-NNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD  361 (829)
T ss_pred             HHHHHHHc-cCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc
Confidence            46677777 9999 666777777788899999999 44 222111 1112244555555666667788888887666777


Q ss_pred             CCCCcEEEecCCcccc
Q psy14425         95 LKLRKFVFCNAQRSVG  110 (114)
Q Consensus        95 lk~~nil~~~~~~~~~  110 (114)
                          ||+.++.....+
T Consensus       362 ----~~l~s~~~~~~~  373 (829)
T KOG0576|consen  362 ----NILGSEEEVKLL  373 (829)
T ss_pred             ----cccccccccccc
Confidence                777666555443

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=91.45  E-value=0.66  Score=32.79  Aligned_cols=64  Identities=14%  Similarity=0.226  Sum_probs=48.5

Q ss_pred             EEEEecCC-C-CCHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcc
Q psy14425         45 AYLVFPPC-S-GDLHSYVRQ------RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        45 ~~~v~e~~-~-~~l~~~~~~------~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~  108 (114)
                      .-+.|..+ + ..+..+.+.      .....+.........++.+..-+|..|-.-+|+.++|+|++++...
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V  156 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKV  156 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceE
Confidence            56677776 3 244444421      2236788888899999999999999999999999999999776643

>PRK05231 homoserine kinase; Provisional

Probab=89.10  E-value=0.33  Score=32.03  Aligned_cols=19  Identities=21%  Similarity=0.405  Sum_probs=16.4

Q ss_pred             CCCccCCCCCCcEEEecCC
Q psy14425         88 QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~~  106 (114)
                      .+++|+|+.|.|++++++.
T Consensus       187 ~~liHgD~~~~Nil~~~~~  205 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDR  205 (319)
T ss_pred             cccCCCCCCCCcEEEECCc
Confidence            3799999999999998654

>TIGR02721 ycfN_thiK thiamine kinase

Probab=88.37  E-value=0.36  Score=30.86  Aligned_cols=19  Identities=11%  Similarity=0.032  Sum_probs=16.3

Q ss_pred             CCccCCCCCCcEEEecCCc
Q psy14425         89 GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~  107 (114)
                      .++|+|+.|.|+++++++.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~~  165 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQGL  165 (256)
T ss_pred             eeecCCCCcCcEEEeCCCC
Confidence            4799999999999987664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=87.28  E-value=1.5  Score=28.82  Aligned_cols=20  Identities=20%  Similarity=0.325  Sum_probs=17.3

Q ss_pred             CCCccCCCCCCcEEEecCCc
Q psy14425         88 QGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+++|+|+.+.|+++++++.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~  206 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSV  206 (307)
T ss_pred             CccCCCCCCcCcEEEECCce
Confidence            57999999999999987653

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=87.26  E-value=0.3  Score=30.16  Aligned_cols=18  Identities=11%  Similarity=0.117  Sum_probs=13.4

Q ss_pred             CCCccCCCCCCcEEEecC
Q psy14425         88 QGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~  105 (114)
                      ..++|+|+.|.|+++++.
T Consensus       166 ~~~~HgD~~~~Nil~~~~  183 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPS  183 (239)
T ss_dssp             EEEE-SS-SGGGEEEESS
T ss_pred             cEEEEeccccccceeeec
Confidence            358999999999999933

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=86.74  E-value=0.48  Score=29.92  Aligned_cols=18  Identities=11%  Similarity=0.069  Sum_probs=15.7

Q ss_pred             CCccCCCCCCcEEEecCC
Q psy14425         89 GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~  106 (114)
                      .++|+|+.|.|+++++++
T Consensus       165 ~l~HGD~~~~Nvlv~~~~  182 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGR  182 (235)
T ss_pred             eEEeCCCCCCcEEEECCC
Confidence            489999999999998654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG2268|consensus

Probab=86.55  E-value=1  Score=30.89  Aligned_cols=78  Identities=8%  Similarity=0.045  Sum_probs=47.1

Q ss_pred             HHHHHhhhCCCC-CcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Q psy14425         19 LLSAHYRLDSHP-HINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK   96 (114)
Q Consensus        19 e~~~~~~~~~h~-~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk   96 (114)
                      |..-+..+-.|. .+++.+++    +.-++|||++ +-++.+.-   ..-..++   +...+..-+.-|-..|++|+|-.
T Consensus       160 EfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~---~v~d~~~---ly~~lm~~Iv~la~~GlIHgDFN  229 (465)
T KOG2268|consen  160 EFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVR---HVEDPPT---LYDDLMGLIVRLANHGLIHGDFN  229 (465)
T ss_pred             HHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeee---ecCChHH---HHHHHHHHHHHHHHcCceecccc
Confidence            343344443332 34444544    5678999998 55665432   1123333   23334444566778999999999


Q ss_pred             CCcEEEecCC
Q psy14425         97 LRKFVFCNAQ  106 (114)
Q Consensus        97 ~~nil~~~~~  106 (114)
                      --||++.+++
T Consensus       230 EFNimv~dd~  239 (465)
T KOG2268|consen  230 EFNIMVKDDD  239 (465)
T ss_pred             hheeEEecCC
Confidence            9999998654

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=86.43  E-value=0.52  Score=30.79  Aligned_cols=17  Identities=18%  Similarity=0.155  Sum_probs=14.9

Q ss_pred             CCccCCCCCCcEEEecC
Q psy14425         89 GIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~  105 (114)
                      .++|+|+.|.|++++++
T Consensus       186 ~lvHGD~~~~Nilv~~~  202 (276)
T cd05152         186 VLVHGDLHPGHILIDED  202 (276)
T ss_pred             eeEeCCCCCCcEEEeCC
Confidence            37999999999999864

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=86.13  E-value=0.59  Score=30.44  Aligned_cols=20  Identities=20%  Similarity=0.348  Sum_probs=17.0

Q ss_pred             CCCccCCCCCCcEEEecCCc
Q psy14425         88 QGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+++|+|+.|.|+++++++.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~  194 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDEL  194 (296)
T ss_pred             CcCCccCcCcccEEEeCCce
Confidence            36899999999999987653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=85.94  E-value=0.43  Score=29.95  Aligned_cols=50  Identities=16%  Similarity=0.159  Sum_probs=28.6

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDL   56 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l   56 (114)
                      ++.|++|......     .+.|...+..+..+.-.++++..+..    .+++||+ +.++
T Consensus        24 ~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i~G~~l   79 (235)
T cd05157          24 QDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFIPGRTL   79 (235)
T ss_pred             CCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEeeCCCcC
Confidence            4678889775432     22466666665344444555554432    3799998 5443

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=85.84  E-value=6.5  Score=24.57  Aligned_cols=92  Identities=11%  Similarity=0.016  Sum_probs=51.8

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      +|..+|+|.-..++    .+.|.+.+..+.....-.+++.+-+.    .+.|||+ |.+|.++-...   +...    ..
T Consensus        44 ~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~L~~~~~~~---~rk~----l~  112 (201)
T COG2112          44 RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRPLGKLEIGG---DRKH----LL  112 (201)
T ss_pred             cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcchhhhhhcc---cHHH----HH
Confidence            35688899875554    44566666655222233345544332    3459999 66887664321   2222    33


Q ss_pred             HHHHHHHHHHHCCCccCCCCC-C-cEEEec
Q psy14425         77 QIAETVRACHAQGIVLRDLKL-R-KFVFCN  104 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~-~-nil~~~  104 (114)
                      .+++..--|-..||-|..++- . |+++.+
T Consensus       113 ~vlE~a~~LD~~GI~H~El~~~~k~vlv~~  142 (201)
T COG2112         113 RVLEKAYKLDRLGIEHGELSRPWKNVLVND  142 (201)
T ss_pred             HHHHHHHHHHHhccchhhhcCCceeEEecC
Confidence            455555456667899988864 3 444443

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=85.22  E-value=7.7  Score=25.41  Aligned_cols=52  Identities=17%  Similarity=0.085  Sum_probs=32.5

Q ss_pred             cEEEEEEecccc---chhHHH---HHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCH
Q psy14425          4 IVVVLEIMSREA---SGNLLS---AHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDL   56 (114)
Q Consensus         4 ~~~avK~~~~~~---~~~e~~---~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l   56 (114)
                      .++.+|+-.+..   ...|..   .+.+. +-..+.+++.+-.+.++.++|+||+ .+.+
T Consensus        40 ~~~FvK~n~~~~~~~f~AEa~gL~~la~s-~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          40 DPFFVKCNQREQLSMFTAEADGLELLARS-NTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             cceEEEecchhhHHHHHHHHHHHHHHHhc-CCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            455666654442   222433   33333 4457778888888899999999998 4433

>PRK12396 5-methylribose kinase; Reviewed

Probab=84.86  E-value=0.62  Score=32.31  Aligned_cols=21  Identities=19%  Similarity=0.241  Sum_probs=18.2

Q ss_pred             CCccCCCCCCcEEEecCCccc
Q psy14425         89 GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~~~  109 (114)
                      .++|+|+.|.|||++++..++
T Consensus       228 aLlHGDlHtGSI~v~~~~~kv  248 (409)
T PRK12396        228 ALIHGDLHTGSVFVKNDSTKV  248 (409)
T ss_pred             hhccCcCCCCCEEecCCceEE
Confidence            489999999999999876655

>PRK10271 thiK thiamine kinase; Provisional

Probab=84.78  E-value=0.75  Score=28.48  Aligned_cols=20  Identities=10%  Similarity=0.100  Sum_probs=16.9

Q ss_pred             CccCCCCCCcEEEecCCccc
Q psy14425         90 IVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        90 i~h~~lk~~nil~~~~~~~~  109 (114)
                      .+|+|+.|.|+++++++..+
T Consensus        79 p~H~D~~~~N~~~~~~~~~l   98 (188)
T PRK10271         79 PLHMDVHAGNLVHSASGLRL   98 (188)
T ss_pred             eecCCCCCccEEEECCCEEE
Confidence            58999999999998877544

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=84.19  E-value=1.7  Score=28.29  Aligned_cols=28  Identities=11%  Similarity=0.049  Sum_probs=22.2

Q ss_pred             HHHHHHHHH--CCCccCCCCCCcEEEecCC
Q psy14425         79 AETVRACHA--QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        79 ~~~l~~lh~--~~i~h~~lk~~nil~~~~~  106 (114)
                      +..+.-.|+  .+.+|+|..|+|||.+..+
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G  180 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFG  180 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCC
Confidence            456677784  4689999999999997755

The function of this family is unknown.

>KOG2464|consensus

Probab=83.01  E-value=9.5  Score=24.58  Aligned_cols=41  Identities=20%  Similarity=0.286  Sum_probs=32.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      -+...+..+..|+...+.-... .++.|||+-+.||+++..+
T Consensus       134 ~~~~~~~si~~q~~~~l~i~~~~~~~~hrdl~~gnili~k~~  175 (246)
T KOG2464|consen  134 ESKNQALSIFWQLVLSLAIAEKSLGFEHRDLHLGNILIKKTG  175 (246)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhhhcccccccCcCcEEEeccc
Confidence            4566677788888877777665 4799999999999997754

>PTZ00384 choline kinase; Provisional

Probab=83.00  E-value=9.1  Score=26.48  Aligned_cols=35  Identities=3%  Similarity=-0.113  Sum_probs=23.5

Q ss_pred             hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCH
Q psy14425         18 NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDL   56 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l   56 (114)
                      .|..++..+.++.--.++++.|..    +++.||+ |.++
T Consensus       101 ~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efIeGr~l  136 (383)
T PTZ00384        101 LQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWVEGNTM  136 (383)
T ss_pred             HHHHHHHHHHhCCCCCeEEEecCC----EEEEEEeccccC
Confidence            477777777566666677887754    4888888 4443

>KOG2137|consensus

Probab=82.45  E-value=0.68  Score=34.08  Aligned_cols=31  Identities=13%  Similarity=0.187  Sum_probs=25.9

Q ss_pred             HHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      .+.+.|+.|+|. .+++|+++.|+++.++..+
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~  137 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANG  137 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCc
Confidence            345588999997 5899999999999997655

>KOG1236|consensus

Probab=82.42  E-value=10  Score=27.11  Aligned_cols=59  Identities=17%  Similarity=0.068  Sum_probs=38.7

Q ss_pred             EEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCCCcEEEec
Q psy14425         45 AYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH-AQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        45 ~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~~i~h~~lk~~nil~~~  104 (114)
                      ..++-+|. +-++..+++. ...++.....+..-..+++.-+- -.+++|.|+.|.||++.-
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~-~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKW-KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             ceeeeeccccccHHhhhhc-ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence            33444556 6677777744 33455555666666666655444 467999999999999943

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=81.81  E-value=2.3  Score=27.82  Aligned_cols=19  Identities=11%  Similarity=0.078  Sum_probs=16.1

Q ss_pred             CCccCCCCCCcEEEec-CCc
Q psy14425         89 GIVLRDLKLRKFVFCN-AQR  107 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~-~~~  107 (114)
                      -++|.|+.|.|++.++ ++.
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l  173 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGL  173 (269)
T ss_pred             eeecCCCCccceEEcCCCcE
Confidence            4789999999999988 443

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=81.32  E-value=0.82  Score=29.92  Aligned_cols=50  Identities=16%  Similarity=0.034  Sum_probs=28.3

Q ss_pred             CcEEEEEEeccc-----cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCH
Q psy14425          3 GIVVVLEIMSRE-----ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDL   56 (114)
Q Consensus         3 ~~~~avK~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l   56 (114)
                      ++.+++|.....     ....|...+..+.+..-.++++..+..    ..++|++ |.++
T Consensus        29 ~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i~G~~l   84 (302)
T cd05156          29 PRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFIPSRTL   84 (302)
T ss_pred             CCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----CchhheeCCCcC
Confidence            578899997543     133466656555333334455665542    2578887 4333

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=80.79  E-value=0.9  Score=31.12  Aligned_cols=21  Identities=14%  Similarity=0.213  Sum_probs=17.6

Q ss_pred             CCccCCCCCCcEEEecCCccc
Q psy14425         89 GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~~~  109 (114)
                      .++|+|+.+.||++++++..+
T Consensus       193 ~llHGDl~~gNi~~~~~~~~~  213 (370)
T TIGR01767       193 TLLHGDLHSGSIFVSEHETKV  213 (370)
T ss_pred             eeeeccCCcccEEEcCCCCEE
Confidence            579999999999998776544

This enzyme is involved in the methionine salvage pathway in certain bacteria.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	114
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-09
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-09
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-09
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		4e-09
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-09
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-09
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-09
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		5e-09
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-09
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		6e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		8e-09
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-08
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-08
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		5e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-07
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-07
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-07
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-07
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		7e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-06
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-06
3kk9_A	282	Camkii Substrate Complex B Length = 282		4e-06
3soa_A	444	Full-Length Human Camkii Length = 444		5e-06
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		9e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-05
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-05
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-05
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-05
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		4e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		4e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		4e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		4e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		4e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		5e-05
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		5e-05
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		5e-05
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		6e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-05
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		6e-05
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-05
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		9e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-04
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		1e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		1e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		1e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		1e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		3e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		6e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		6e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		6e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-04
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		7e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-04
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-04

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22  AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++ RL  HPHI  L++V+       +V      +L  Y+ QR ++ E EAR+ F+QI   
Sbjct: 66  SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 125
Query: 82  VRACHAQGIVLRDLK 96
           V  CH   IV RDLK
Sbjct: 126 VEYCHRHKIVHRDLK 140

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22  AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++ RL  HPHI  L++V+       +V      +L  Y+ QR ++ E EAR+ F+QI   
Sbjct: 65  SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124
Query: 82  VRACHAQGIVLRDLK 96
           V  CH   IV RDLK
Sbjct: 125 VEYCHRHKIVHRDLK 139

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22  AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++ RL  HPHI  L++V+       +V      +L  Y+ QR ++ E EAR+ F+QI   
Sbjct: 56  SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 115
Query: 82  VRACHAQGIVLRDLK 96
           V  CH   IV RDLK
Sbjct: 116 VEYCHRHKIVHRDLK 130

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22  AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++ RL  HPHI  L++V+       +V      +L  Y+ QR ++ E EAR+ F+QI   
Sbjct: 60  SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 82  VRACHAQGIVLRDLK 96
           V  CH   IV RDLK
Sbjct: 120 VEYCHRHKIVHRDLK 134

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 71  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 131 QKFIVHRDLK 140

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 71  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 131 QKFIVHRDLK 140

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 71  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 131 QKFIVHRDLK 140

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 72  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 132 QKYIVHRDLK 141

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 71  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 131 QKFIVHRDLK 140

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 71  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 131 QKFIVHRDLK 140

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YL+    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 69  NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 129 QKRIVHRDLK 138

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YL+    SG ++  Y+    R+KE EAR  FRQI   V+ CH
Sbjct: 72  NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 132 QKRIVHRDLK 141

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 22  AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++ +L  HPHI  L++V+       +V     G+L  Y+ ++KR+ E E R+ F+QI   
Sbjct: 61  SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 82  VRACHAQGIVLRDLK 96
           +  CH   IV RDLK
Sbjct: 121 IEYCHRHKIVHRDLK 135

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+     +KE EAR  FRQI   V+ CH
Sbjct: 64  NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 124 QKFIVHRDLK 133

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP+I  L EV+  +K  YLV    SG ++  Y+    R KE EAR  FRQI   V+ CH
Sbjct: 71  NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 87  AQGIVLRDLK 96
            + IV RDLK
Sbjct: 131 QKFIVHRDLK 140

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  HPHI  L++V+      ++V    SG +L  Y+ +  R++E EAR+LF+QI   V 
Sbjct: 66  KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 84  ACHAQGIVLRDLK 96
            CH   +V RDLK
Sbjct: 126 YCHRHMVVHRDLK 138

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  HPHI  L++V+      ++V    SG +L  Y+ +  R++E EAR+LF+QI   V 
Sbjct: 66  KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 84  ACHAQGIVLRDLK 96
            CH   +V RDLK
Sbjct: 126 YCHRHMVVHRDLK 138

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL  HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E+V 
Sbjct: 58  RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 84  ACHAQGIVLRDLKLRKFVFCNAQRSVGHELK 114
            CH  GIV RDLK    +   A +S G  +K
Sbjct: 118 HCHLNGIVHRDLKPENLLL--ASKSKGAAVK 146

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  HPHI  L++V+      ++V    SG +L  Y+ +  RL E E+R+LF+QI   V 
Sbjct: 71  KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 84  ACHAQGIVLRDLK 96
            CH   +V RDLK
Sbjct: 131 YCHRHMVVHRDLK 143

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL  HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E+V 
Sbjct: 58  RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 84  ACHAQGIVLRDLKLRKFVFCNAQRSVGHELK 114
            CH  GIV RDLK    +   A +S G  +K
Sbjct: 118 HCHLNGIVHRDLKPENLLL--ASKSKGAAVK 146

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E++  CH+
Sbjct: 87  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 88  QGIVLRDLKLRKFVFCNAQRSVGHEL 113
            GIV R+LK    +  +  +    +L
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKL 172

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E++  CH+
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 88  QGIVLRDLKLRKFVFCNAQRSVGHEL 113
            GIV R+LK    +  +  +    +L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKL 149

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E++  CH+
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 88  QGIVLRDLKLRKFVFCNAQRSVGHEL 113
            GIV R+LK    +  +  +    +L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKL 149

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E++  CH+
Sbjct: 63  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 88  QGIVLRDLKLRKFVFCNAQRSVGHEL 113
            GIV R+LK    +  +  +    +L
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKL 148

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL  HP+I  LH+ +  +   YL+F   +G +L   +  R+   EA+A    +QI E V 
Sbjct: 65  RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 84  ACHAQGIVLRDLK 96
            CH  G+V R+LK
Sbjct: 125 HCHQMGVVHRNLK 137

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 13  REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
           REA+   +    ++  HP+I  L +    +   +LVF     G+L  Y+ ++  L E E 
Sbjct: 54  REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 113
Query: 72  RKLFRQIAETVRACHAQGIVLRDLK 96
           RK+ R + E + A H   IV RDLK
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLK 138

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL  HP+I  LH+ +  +   YL+F   +G +L   +  R+   EA+A    +QI E V 
Sbjct: 76  RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 135
Query: 84  ACHAQGIVLRDLK 96
            CH  G+V RDLK
Sbjct: 136 HCHQMGVVHRDLK 148

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 13  REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
           REA+   +    ++  HP+I  L +    +   +LVF     G+L  Y+ ++  L E E 
Sbjct: 67  REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 126
Query: 72  RKLFRQIAETVRACHAQGIVLRDLK 96
           RK+ R + E + A H   IV RDLK
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLK 151

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 13  REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
           REA+   +    ++  HP+I  L +    +   +LVF     G+L  Y+ ++  L E E 
Sbjct: 67  REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 126
Query: 72  RKLFRQIAETVRACHAQGIVLRDLK 96
           RK+ R + E + A H   IV RDLK
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLK 151

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HPHI +L +        +LVF     G+L  Y+ ++  L E E R + R + E V   HA
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 88  QGIVLRDLK 96
             IV RDLK
Sbjct: 219 NNIVHRDLK 227

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 8   LEIMSREASGNL---LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQR 63
           ++I+S+    N    ++A    + HP+I  LHEV       +LV    +G +L   ++++
Sbjct: 41  VKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK 100
Query: 64  KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
           K   E EA  + R++   V   H  G+V RDLK    +F +   ++
Sbjct: 101 KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL 146

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 23  HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++R   HP+I    EV+L    LA ++     G+L+  +    R  E EAR  F+Q+   
Sbjct: 69  NHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 82  VRACHAQGIVLRDLKL 97
           V  CH+  I  RDLKL
Sbjct: 129 VSYCHSMQICHRDLKL 144

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL  H +I  LH+ +  +   YLVF   +G +L   +  R+   EA+A    +QI E V 
Sbjct: 58  RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 117
Query: 84  ACHAQGIVLRDLK 96
            CH  G+V RDLK
Sbjct: 118 HCHQMGVVHRDLK 130

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+E    +   YLV   C+G +L   V  ++  +E++A ++ + +   V  CH
Sbjct: 64  DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 87  AQGIVLRDLKLRKFVF 102
              +  RDLK   F+F
Sbjct: 124 KLNVAHRDLKPENFLF 139

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+E    +   YLV   C+G +L   V  ++  +E++A ++ + +   V  CH
Sbjct: 81  DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 87  AQGIVLRDLKLRKFVF 102
              +  RDLK   F+F
Sbjct: 141 KLNVAHRDLKPENFLF 156

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R   HP+I +L +V    K  Y+V      G+L   + ++K   E EA  +   I +TV 
Sbjct: 71  RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE 130
Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
             HAQG+V RDLK    ++ +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVD 151

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R   HP+I +L +V    K  Y+V      G+L   + ++K   E EA  +   I +TV 
Sbjct: 71  RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVE 130
Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
             HAQG+V RDLK    ++ +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVD 151

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23  HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++R   HP+I    EV+L    LA ++     G+L   +    R  E EAR  F+Q+   
Sbjct: 68  NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 82  VRACHAQGIVLRDLKL 97
           V  CHA  +  RDLKL
Sbjct: 128 VSYCHAMQVCHRDLKL 143

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23  HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++R   HP+I    EV+L    LA ++     G+L   +    R  E EAR  F+Q+   
Sbjct: 68  NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 82  VRACHAQGIVLRDLKL 97
           V  CHA  +  RDLKL
Sbjct: 128 VSYCHAMQVCHRDLKL 143

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23  HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++R   HP+I    EV+L    LA ++     G+L   +    R  E EAR  F+Q+   
Sbjct: 68  NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 82  VRACHAQGIVLRDLKL 97
           V  CHA  +  RDLKL
Sbjct: 128 VSYCHAMQVCHRDLKL 143

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23  HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           ++R   HP+I    EV+L    LA ++     G+L   +    R  E EAR  F+Q+   
Sbjct: 67  NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 82  VRACHAQGIVLRDLKL 97
           V  CHA  +  RDLKL
Sbjct: 127 VSYCHAMQVCHRDLKL 142

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50  PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           P    DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 91  PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIK 137

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35  LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
           L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  GIV  D
Sbjct: 93  LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152
Query: 95  LKLRKFVFCNA 105
           LK   F+  + 
Sbjct: 153 LKPANFLIVDG 163

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35  LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
           L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  GIV  D
Sbjct: 93  LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152
Query: 95  LKLRKFVFCNA 105
           LK   F+  + 
Sbjct: 153 LKPANFLIVDG 163

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
           HPHI  L E    D + Y+VF    G DL   + +R        EA A    RQI E +R
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 84  ACHAQGIVLRDLKLRKFVFCNAQRS 108
            CH   I+ RD+K    +  + + S
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENS 169

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35  LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
           L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  GIV  D
Sbjct: 77  LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 136
Query: 95  LKLRKFVFCNA 105
           LK   F+  + 
Sbjct: 137 LKPANFLIVDG 147

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35  LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
           L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  GIV  D
Sbjct: 73  LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 132
Query: 95  LKLRKFVFCNA 105
           LK   F+  + 
Sbjct: 133 LKPANFLIVDG 143

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35  LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
           L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  GIV  D
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180
Query: 95  LKLRKFVFCNA 105
           LK   F+  + 
Sbjct: 181 LKPANFLIVDG 191

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R   HP+I +L +V    K  YLV      G+L   + ++K   E EA  +   I +TV 
Sbjct: 76  RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
             H+QG+V RDLK    ++ +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVD 156

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           RL  HP+I  LH+ +  +   YLVF   +G +L   +  R+   EA+A     QI E+V 
Sbjct: 85  RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 84  ACHAQGIVLRDLK 96
             H   IV RDLK
Sbjct: 145 HIHQHDIVHRDLK 157

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 1   MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
            AG VV    +L+   +E     ++ H  LD +PH+   H     D   Y+V   C    
Sbjct: 54  FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 112
Query: 55  --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
             +LH   ++RK + E EAR   RQ  + V+  H   ++ RDLKL   +F N    V
Sbjct: 113 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMDV 165

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLFRQIAETVRACH 86
           HP I  L+         YLV   C +G+++ Y++ R K   E EAR    QI   +   H
Sbjct: 70  HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 87  AQGIVLRDLKLRKFVFC 103
           + GI+ RDL L   +  
Sbjct: 130 SHGILHRDLTLSNLLLT 146

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R   HP+I +L +V    K  YLV      G+L   + ++K   E EA  +   I +TV 
Sbjct: 76  RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
             H+QG+V RDLK    ++ +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVD 156

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1   MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
            AG VV    +L+   +E     ++ H  LD +PH+   H     D   Y+V   C    
Sbjct: 70  FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 55  --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
             +LH   ++RK + E EAR   RQ  + V+  H   ++ RDLKL
Sbjct: 129 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1   MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
            AG VV    +L+   +E     ++ H  LD +PH+   H     D   Y+V   C    
Sbjct: 70  FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 55  --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
             +LH   ++RK + E EAR   RQ  + V+  H   ++ RDLKL
Sbjct: 129 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1   MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
            AG VV    +L+   +E     ++ H  LD +PH+   H     D   Y+V   C    
Sbjct: 70  FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 55  --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
             +LH   ++RK + E EAR   RQ  + V+  H   ++ RDLKL
Sbjct: 129 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50  PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           P    DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 91  PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 137

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50  PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           P    DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 91  PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 137

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 164

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 142

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 176

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 189

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50  PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           P    DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 94  PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 140

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 156

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 142

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 156

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 141

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 141

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  ++ +R  L+E  AR  F Q+ E VR CH  G++ RD+K
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 142

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
           HPHI  L E    D + Y+VF    G DL   + +R        EA A    RQI E +R
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 84  ACHAQGIVLRDLK 96
            CH   I+ RD+K
Sbjct: 145 YCHDNNIIHRDVK 157

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
           HPHI  L E    D + Y+VF    G DL   + +R        EA A    RQI E +R
Sbjct: 87  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 84  ACHAQGIVLRDLK 96
            CH   I+ RD+K
Sbjct: 147 YCHDNNIIHRDVK 159

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  L+E        YLV    +G +L   +  RKR  E +A ++ RQ+   +   H 
Sbjct: 85  HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 88  QGIVLRDLK 96
             IV RDLK
Sbjct: 145 NKIVHRDLK 153

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +LD HP+I  L E+L      Y+V    +G +L   + +RKR  E +A ++ +Q+   + 
Sbjct: 77  KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 84  ACHAQGIVLRDLK 96
             H   IV RDLK
Sbjct: 136 YMHKHNIVHRDLK 148

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  L+E        YLV    +G +L   +  RKR  E +A ++ RQ+   +   H 
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 88  QGIVLRDLK 96
             IV RDLK
Sbjct: 168 NKIVHRDLK 176

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  L+E        YLV    +G +L   +  RKR  E +A ++ RQ+   +   H 
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 88  QGIVLRDLK 96
             IV RDLK
Sbjct: 145 NKIVHRDLK 153

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  L+E        YLV    +G +L   +  RKR  E +A ++ RQ+   +   H 
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 88  QGIVLRDLK 96
             IV RDLK
Sbjct: 169 NKIVHRDLK 177

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPP-CSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+E        YLV      G+L   +  RKR  E +A ++ RQ+   +   H
Sbjct: 90  DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 87  AQGIVLRDLK 96
              IV RDLK
Sbjct: 150 KNKIVHRDLK 159

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
           DL  Y+ ++  L E  +R  F Q+   ++ CH++G+V RD+K
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIK 166

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 25  RLDSHP-HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  H   I  L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V 
Sbjct: 63  KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 84  ACHAQGIVLRDLKLRKFVFCNA 105
             H  GIV  DLK   F+  + 
Sbjct: 123 TIHQHGIVHSDLKPANFLIVDG 144

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 25  RLDSHP-HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  H   I  L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V 
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 84  ACHAQGIVLRDLKLRKFVFCNA 105
             H  GIV  DLK   F+  + 
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDG 191

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 25  RLDSHP-HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  H   I  L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V 
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 84  ACHAQGIVLRDLKLRKFVFCNA 105
             H  GIV  DLK   F+  + 
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDG 191

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +LD HP+I  L E+L      Y+V      G+L   + +RKR  E +A ++ +Q+   + 
Sbjct: 77  KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 84  ACHAQGIVLRDLK 96
             H   IV RDLK
Sbjct: 136 YMHKHNIVHRDLK 148

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +LD HP+I  L E+L      Y+V      G+L   + +RKR  E +A ++ +Q+   + 
Sbjct: 77  KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 84  ACHAQGIVLRDLK 96
             H   IV RDLK
Sbjct: 136 YMHKHNIVHRDLK 148

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  LH     +   + V    +G DL  +++++++L E  AR    +I+  +   H
Sbjct: 64  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 124 ERGIIYRDLKL 134

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  LH     +   + V    +G DL  +++++++L E  AR    +I+  +   H
Sbjct: 79  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 139 ERGIIYRDLKL 149

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  LH     +   + V    +G DL  +++++++L E  AR    +I+  +   H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 171 ERGIIYRDLKL 181

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP +  LH     +   + V    +G DL  +++++++L E  AR    +I+  +   H
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 87  AQGIVLRDLKL 97
            +GI+ RDLKL
Sbjct: 128 ERGIIYRDLKL 138

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	114
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-19
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-18
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-18
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-18
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-18
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-18
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-18
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-18
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	9e-18
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-17
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-17
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-17
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-17
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-17
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-17
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-17
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-17
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-17
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-17
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	6e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-17
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-16
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-16
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-16
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	9e-16
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-15
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-15
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-15
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-15
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-15
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-15
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-15
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-15
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-15
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-14
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-14
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-14
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-14
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-14
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-14
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-13
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-13
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-11
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-10
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-10
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-10
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-10
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	8e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	5e-04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	8e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	9e-04

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 80.4 bits (199), Expect = 1e-19
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFP-PCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRAC 85
            HP +  L +     +   LV   P    DL  Y+ ++  L E  +R  F Q+   ++ C
Sbjct: 96  GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155

Query: 86  HAQGIVLRDLKL 97
           H++G+V RD+K 
Sbjct: 156 HSRGVVHRDIKD 167

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 78.2 bits (193), Expect = 1e-18
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS--GDLHSYVRQRKRLKEAEARKLFRQIAETVRAC 85
               +  L +         L+        DL  ++ +R  L+E  AR  F Q+ E VR C
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 165

Query: 86  HAQGIVLRDLKL 97
           H  G++ RD+K 
Sbjct: 166 HNCGVLHRDIKD 177

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 78.1 bits (193), Expect = 1e-18
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           ++ +HP+I  L EV+  +K  YL+    S G++  Y+    R+KE EAR  FRQI   V+
Sbjct: 69  KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 128

Query: 84  ACHAQGIVLRDLK 96
            CH + IV RDLK
Sbjct: 129 YCHQKRIVHRDLK 141

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 77.7 bits (192), Expect = 2e-18
 Identities = 27/72 (37%), Positives = 40/72 (55%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRA 84
           +L  HPHI  L++V+       +V     G+L  Y+ ++KR+ E E R+ F+QI   +  
Sbjct: 64  KLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEY 123

Query: 85  CHAQGIVLRDLK 96
           CH   IV RDLK
Sbjct: 124 CHRHKIVHRDLK 135

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 76.9 bits (190), Expect = 2e-18
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           ++  HP+I  L +    +   +LVF     G+L  Y+ ++  L E E RK+ R + E + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138

Query: 84  ACHAQGIVLRDLK 96
           A H   IV RDLK
Sbjct: 139 ALHKLNIVHRDLK 151

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 77.4 bits (191), Expect = 3e-18
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R   HP+I    EV+L      ++    S G+L+  +    R  E EAR  F+Q+   V 
Sbjct: 71  RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS 130

Query: 84  ACHAQGIVLRDLKL 97
            CH+  I  RDLKL
Sbjct: 131 YCHSMQICHRDLKL 144

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 76.7 bits (189), Expect = 4e-18
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS--GDLHSYVRQRKRLKEAEARKLFRQIAETV 82
               H +I  + ++        LV        DL +++ +  RL E  A  +FRQ+   V
Sbjct: 84  SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143

Query: 83  RACHAQGIVLRDLK 96
                + I+ RD+K
Sbjct: 144 GYLRLKDIIHRDIK 157

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 75.3 bits (186), Expect = 8e-18
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  HPHI  L++V+      ++V    S G+L  Y+ +  R++E EAR+LF+QI   V 
Sbjct: 66  KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125

Query: 84  ACHAQGIVLRDLK 96
            CH   +V RDLK
Sbjct: 126 YCHRHMVVHRDLK 138

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 75.4 bits (186), Expect = 9e-18
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 23  HYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAET 81
            Y+   H ++  L E    +   YLVF     G + S++ +R+   E EA  + + +A  
Sbjct: 64  LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123

Query: 82  VRACHAQGIVLRDLK 96
           +   H +GI  RDLK
Sbjct: 124 LDFLHNKGIAHRDLK 138

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 75.4 bits (186), Expect = 1e-17
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 23  HYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAET 81
               + HP+I  LHEV       +LV    +G +L   ++++K   E EA  + R++   
Sbjct: 59  LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118

Query: 82  VRACHAQGIVLRDLK 96
           V   H  G+V RDLK
Sbjct: 119 VSHMHDVGVVHRDLK 133

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 75.9 bits (187), Expect = 1e-17
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+E        YLV    +G +L   +  RKR  E +A ++ RQ+   +   H
Sbjct: 84  DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 143

Query: 87  AQGIVLRDLKLRKFVFCN 104
              IV RDLK    +  +
Sbjct: 144 KNKIVHRDLKPENLLLES 161

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 75.1 bits (185), Expect = 2e-17
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           ++  HPHI +L +        +LVF     G+L  Y+ ++  L E E R + R + E V 
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214

Query: 84  ACHAQGIVLRDLK 96
             HA  IV RDLK
Sbjct: 215 FLHANNIVHRDLK 227

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  LH+ +  +   YLVF   + G+L   +  R+   EA+A    +QI E++  CH
Sbjct: 63  QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122

Query: 87  AQGIVLRDLK 96
           + GIV R+LK
Sbjct: 123 SNGIVHRNLK 132

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R  +H H+   H     +   ++V   C    L    ++RK L E EAR   RQI    +
Sbjct: 70  RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129

Query: 84  ACHAQGIVLRDLKL 97
             H   ++ RDLKL
Sbjct: 130 YLHRNRVIHRDLKL 143

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 74.3 bits (183), Expect = 2e-17
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           R  +H H+   H     +   ++V   C    L    ++RK L E EAR   RQI    +
Sbjct: 96  RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155

Query: 84  ACHAQGIVLRDLKL 97
             H   ++ RDLKL
Sbjct: 156 YLHRNRVIHRDLKL 169

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 74.8 bits (184), Expect = 3e-17
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           +L  HPHI  L++V+      ++V    S G+L  Y+ +  RL E E+R+LF+QI   V 
Sbjct: 71  KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130

Query: 84  ACHAQGIVLRDLK 96
            CH   +V RDLK
Sbjct: 131 YCHRHMVVHRDLK 143

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 74.7 bits (184), Expect = 3e-17
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L +V    K  YLV     G +L   +  R +  E +A  + +QI   +   H
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163

Query: 87  AQGIVLRDLKLRKFVFCN 104
              IV RD+K    +  N
Sbjct: 164 KHNIVHRDIKPENILLEN 181

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 74.4 bits (183), Expect = 4e-17
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L++     +  YLV     G +L   +  R +  E +A  + +Q+   V   H
Sbjct: 94  DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH 153

Query: 87  AQGIVLRDLKLRKFVFCN 104
              IV RDLK    +  +
Sbjct: 154 KHNIVHRDLKPENLLLES 171

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 74.3 bits (183), Expect = 4e-17
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP I  +      +   Y+V      G+L   V   KRLKEA  +  F Q+   V+  H
Sbjct: 198 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 256

Query: 87  AQGIVLRDLK 96
             GI+ RDLK
Sbjct: 257 ENGIIHRDLK 266

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 73.5 bits (181), Expect = 5e-17
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 23  HYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAET 81
             R   HP+I +L +V    K  Y+V      G+L   + ++K   E EA  +   I +T
Sbjct: 69  LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128

Query: 82  VRACHAQGIVLRDLK 96
           V   HAQG+V RDLK
Sbjct: 129 VEYLHAQGVVHRDLK 143

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 74.0 bits (182), Expect = 6e-17
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L E+L      Y+V    +G +L   + +RKR  E +A ++ +Q+   +   H
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138

Query: 87  AQGIVLRDLKLRKFVFCN 104
              IV RDLK    +  +
Sbjct: 139 KHNIVHRDLKPENILLES 156

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 72.6 bits (179), Expect = 6e-17
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           ++ +H ++   +       + YL    CS G+L   +     + E +A++ F Q+   V 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119

Query: 84  ACHAQGIVLRDLK 96
             H  GI  RD+K
Sbjct: 120 YLHGIGITHRDIK 132

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 73.1 bits (180), Expect = 7e-17
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP I  +      +   Y+V      G+L   V   KRLKEA  +  F Q+   V+  H
Sbjct: 73  NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131

Query: 87  AQGIVLRDLK 96
             GI+ RDLK
Sbjct: 132 ENGIIHRDLK 141

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 71.9 bits (177), Expect = 1e-16
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+E    +   YLV   C+ G+L   V  ++  +E++A ++ + +   V  CH
Sbjct: 64  DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123

Query: 87  AQGIVLRDLKLRKFVFCN 104
              +  RDLK   F+F  
Sbjct: 124 KLNVAHRDLKPENFLFLT 141

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 72.7 bits (179), Expect = 1e-16
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  LH+ +  +   YLVF   + G+L   +  R+   EA+A    +QI E++  CH
Sbjct: 86  QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145

Query: 87  AQGIVLRDLK 96
           + GIV R+LK
Sbjct: 146 SNGIVHRNLK 155

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 72.3 bits (178), Expect = 1e-16
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           ++ +H ++   +       + YL    CS G+L   +     + E +A++ F Q+   V 
Sbjct: 60  KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119

Query: 84  ACHAQGIVLRDLK 96
             H  GI  RD+K
Sbjct: 120 YLHGIGITHRDIK 132

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 71.1 bits (175), Expect = 3e-16
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 25  RLDSHPHINSLHEVLLG---DKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAE 80
           +   HP++  L EVL     D L Y+VF   + G +       K L E +AR  F+ + +
Sbjct: 91  KKLDHPNVVKLVEVLDDPNEDHL-YMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIK 148

Query: 81  TVRACHAQGIVLRDLK 96
            +   H Q I+ RD+K
Sbjct: 149 GIEYLHYQKIIHRDIK 164

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 70.7 bits (174), Expect = 4e-16
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L E+L      Y+V    + G+L   + +RKR  E +A ++ +Q+   +   H
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138

Query: 87  AQGIVLRDLKLRKFVFCN 104
              IV RDLK    +  +
Sbjct: 139 KHNIVHRDLKPENILLES 156

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 70.8 bits (174), Expect = 7e-16
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  LH+ +  +   YL+F   +G +L   +  R+   EA+A    +QI E V  CH
Sbjct: 68  KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127

Query: 87  AQGIVLRDLK 96
             G+V R+LK
Sbjct: 128 QMGVVHRNLK 137

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 70.0 bits (172), Expect = 9e-16
 Identities = 19/68 (27%), Positives = 36/68 (52%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
              I  L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  
Sbjct: 87  SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146

Query: 89  GIVLRDLK 96
           GIV  DLK
Sbjct: 147 GIVHSDLK 154

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 69.8 bits (171), Expect = 1e-15
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 28  SHPHINSLHEVL--LGDKLAYLVFPPCS-GDLHSYVRQRKR---LKEAEARKLFRQIAET 81
           +H +I  L  +      +   L+   C  G L++ + +      L E+E   + R +   
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 82  VRACHAQGIVLRDLK 96
           +      GIV R++K
Sbjct: 125 MNHLRENGIVHRNIK 139

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 69.7 bits (171), Expect = 1e-15
 Identities = 19/68 (27%), Positives = 36/68 (52%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
              I  L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  
Sbjct: 68  SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127

Query: 89  GIVLRDLK 96
           GIV  DLK
Sbjct: 128 GIVHSDLK 135

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 69.2 bits (170), Expect = 2e-15
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 25  RLDSHPHINSLHEVLLG---DKLAYLVFPPCSG---DLHSYVRQRKRLKEAEARKLFRQI 78
           R   H ++  L +VL      K+ Y+V   C     ++   V + KR    +A   F Q+
Sbjct: 61  RRLRHKNVIQLVDVLYNEEKQKM-YMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYFCQL 118

Query: 79  AETVRACHAQGIVLRDLK 96
            + +   H+QGIV +D+K
Sbjct: 119 IDGLEYLHSQGIVHKDIK 136

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 69.5 bits (170), Expect = 2e-15
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 28  SHPHINSLHEVL--LGDKLAYLVFPPCS-GDLHSYVRQRKR---LKEAEARKLFRQIAET 81
           +H +I  L  +      +   L+   C  G L++ + +      L E+E   + R +   
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 82  VRACHAQGIVLRDLK 96
           +      GIV R++K
Sbjct: 125 MNHLRENGIVHRNIK 139

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 69.4 bits (170), Expect = 2e-15
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 6/90 (6%)

Query: 8   LEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRL 66
                RE    LL      D HP++          +  Y+    C+  L  YV Q+    
Sbjct: 61  FSFADREVQ--LLR---ESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAH 115

Query: 67  KEAEARKLFRQIAETVRACHAQGIVLRDLK 96
              E   L +Q    +   H+  IV RDLK
Sbjct: 116 LGLEPITLLQQTTSGLAHLHSLNIVHRDLK 145

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 69.3 bits (169), Expect = 3e-15
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 29  HPHINSLHEV------LLGDKLAYLVFPPCS-GDLHSYVRQRKR---LKEAEARKLFRQI 78
           HP++ S  EV      L  + L  L    C  GDL  Y+ Q +    LKE   R L   I
Sbjct: 71  HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130

Query: 79  AETVRACHAQGIVLRDLK 96
           +  +R  H   I+ RDLK
Sbjct: 131 SSALRYLHENRIIHRDLK 148

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 68.5 bits (168), Expect = 4e-15
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           SHP+I  L E+        LV    + G+L   + ++    E +A    +QI E V   H
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165

Query: 87  AQGIVLRDLKLRKFVFCN 104
             GIV RDLK    ++  
Sbjct: 166 ENGIVHRDLKPENLLYAT 183

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 68.7 bits (168), Expect = 4e-15
 Identities = 19/68 (27%), Positives = 36/68 (52%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
              I  L++  + D+  Y+V    + DL+S+++++K +   E +  ++ + E V   H  
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174

Query: 89  GIVLRDLK 96
           GIV  DLK
Sbjct: 175 GIVHSDLK 182

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 67.6 bits (166), Expect = 5e-15
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            H +I +L ++       YLV    S G+L   + +R    E +A  + +Q+   V+  H
Sbjct: 64  KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH 123

Query: 87  AQGIVLRDLKLRKFVFCN 104
             GIV RDLK    ++  
Sbjct: 124 ENGIVHRDLKPENLLYLT 141

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 67.7 bits (166), Expect = 7e-15
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 23  HYRLDSHPHINSLHEV----LLGDKLAYLVFPPCS-GDLHSYVRQRKRLK--EAEARKLF 75
           H++    PHI  + +V      G +   ++      G+L S +++R      E EA ++ 
Sbjct: 75  HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134

Query: 76  RQIAETVRACHAQGIVLRDLK 96
           R I   ++  H+  I  RD+K
Sbjct: 135 RDIGTAIQFLHSHNIAHRDVK 155

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 67.3 bits (165), Expect = 7e-15
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-----DLHSYVRQRKRLKEAEARKLFRQIAETV 82
            HP+I  + EV       Y+V   C G      + S   + K L E    +L +Q+   +
Sbjct: 78  DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137

Query: 83  RACHAQGIVLRDLKLRKFVFCN 104
              H+Q +V +DLK    +F +
Sbjct: 138 AYFHSQHVVHKDLKPENILFQD 159

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 67.8 bits (166), Expect = 8e-15
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 23  HYRLDSHPHINSLHEV----LLGDKLAYLVFPPCSG-DLHSYVRQRKRLK--EAEARKLF 75
           H+R    PHI  + +V      G K   +V     G +L S ++ R      E EA ++ 
Sbjct: 108 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 167

Query: 76  RQIAETVRACHAQGIVLRDLK 96
           + I E ++  H+  I  RD+K
Sbjct: 168 KSIGEAIQYLHSINIAHRDVK 188

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
           HP+I  ++      K  YL+      G+L+  +++  R  E  +     ++A+ +  CH 
Sbjct: 73  HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132

Query: 88  QGIVLRDLK 96
           + ++ RD+K
Sbjct: 133 RKVIHRDIK 141

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 66.9 bits (164), Expect = 8e-15
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+         YL+      G ++  +++  +  E        ++A  +  CH
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126

Query: 87  AQGIVLRDLK 96
           ++ ++ RD+K
Sbjct: 127 SKRVIHRDIK 136

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLK----EAEARKLFRQIAETV 82
            HPHI  L E    D + Y+VF    G DL   + +R        EA A    RQI E +
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143

Query: 83  RACHAQGIVLRDLK 96
           R CH   I+ RD+K
Sbjct: 144 RYCHDNNIIHRDVK 157

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I +LH++        L+    S G+L  ++ +++ L E EA +  +QI + V   H
Sbjct: 66  RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125

Query: 87  AQGIVLRDLKLRKFVFCN 104
           ++ I   DLK    +  +
Sbjct: 126 SKRIAHFDLKPENIMLLD 143

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 67.5 bits (165), Expect = 1e-14
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-------KRLKEAEARKLFRQ 77
             D HP++   +     D+  Y+    C+ +L   V  +       K  KE     L RQ
Sbjct: 64  ESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123

Query: 78  IAETVRACHAQGIVLRDLK 96
           IA  V   H+  I+ RDLK
Sbjct: 124 IASGVAHLHSLKIIHRDLK 142

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 66.9 bits (164), Expect = 1e-14
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            H ++ +LH+V        L+    S G+L  ++ Q++ L E EA    +QI + V   H
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132

Query: 87  AQGIVLRDLKLRKFVFCN 104
            + I   DLK    +  +
Sbjct: 133 TKKIAHFDLKPENIMLLD 150

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 66.6 bits (163), Expect = 2e-14
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I +LH+V        L+    S G+L  ++ Q++ L E EA    +QI + V   H
Sbjct: 73  LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132

Query: 87  AQGIVLRDLKLRKFVFCN 104
            + I   DLK    +  +
Sbjct: 133 TKKIAHFDLKPENIMLLD 150

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 66.1 bits (162), Expect = 3e-14
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP++ +LHEV        L+    +G +L  ++ +++ L E EA +  +QI   V   H
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131

Query: 87  AQGIVLRDLKLRKFVFCN 104
           +  I   DLK    +  +
Sbjct: 132 SLQIAHFDLKPENIMLLD 149

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQR-KRLKEAEARKLFRQIAETV 82
               HP I  L+         YLV   C  G+++ Y++ R K   E EAR    QI   +
Sbjct: 66  CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125

Query: 83  RACHAQGIVLRDLKL 97
              H+ GI+ RDL L
Sbjct: 126 LYLHSHGILHRDLTL 140

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 65.0 bits (159), Expect = 5e-14
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 23  HYRLDSHPHINSLHEV----LLGDKLAYLVFPPCS-GDLHSYVRQRKRLK--EAEARKLF 75
           H+R    PHI  + +V      G K   +V      G+L S ++ R      E EA ++ 
Sbjct: 64  HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123

Query: 76  RQIAETVRACHAQGIVLRDLKLRKFVFCN 104
           + I E ++  H+  I  RD+K    ++ +
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTS 152

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 65.0 bits (159), Expect = 6e-14
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYV--RQRKRLKEAEARKLFRQIAET 81
              S P + +LHEV        L+    + G++ S       + + E +  +L +QI E 
Sbjct: 84  LAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143

Query: 82  VRACHAQGIVLRDLK 96
           V   H   IV  DLK
Sbjct: 144 VYYLHQNNIVHLDLK 158

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 63.7 bits (155), Expect = 2e-13
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSY-VRQRKRLKEAEARKLFRQIAETVRAC 85
            HP + +LH+    D    +++   SG +L      +  ++ E EA +  RQ+ + +   
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271

Query: 86  HAQGIVLRDLKLRKFVFCNAQRSVGHELK 114
           H    V  DLK    +F   +    +ELK
Sbjct: 272 HENNYVHLDLKPENIMFTTKR---SNELK 297

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 62.7 bits (153), Expect = 4e-13
 Identities = 17/69 (24%), Positives = 30/69 (43%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
            H +I  L  V+  +   +L+F     DL  Y+ +   +     +    Q+   V  CH+
Sbjct: 91  QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS 150

Query: 88  QGIVLRDLK 96
           +  + RDLK
Sbjct: 151 RRCLHRDLK 159

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 62.0 bits (151), Expect = 7e-13
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 24  YRLDSHPHINSLHEVLL----GDKLAYLVFPPCS-GDLHSYVRQRK----RLKEAEARKL 74
           +RL +HP+I  L    L        A+L+ P    G L + + + K     L E +   L
Sbjct: 80  HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139

Query: 75  FRQIAETVRACHAQGIVLRDLK 96
              I   + A HA+G   RDLK
Sbjct: 140 LLGICRGLEAIHAKGYAHRDLK 161

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRK-RLKEAEARKLFRQIAETVRAC 85
            H ++  L++         LV     G +L   +      L E +     +QI E +R  
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H   I+  DLK    +  N
Sbjct: 204 HQMYILHLDLKPENILCVN 222

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRK-RLKEAEARKLFRQIAETVRAC 85
            HP + +LH+         L+    SG +L   +     ++ EAE     RQ  E ++  
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H   IV  D+K    +   
Sbjct: 166 HEHSIVHLDIKPENIMCET 184

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 60.2 bits (146), Expect = 3e-12
 Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 18/103 (17%)

Query: 8   LEIMSREASGNLLSAHYRLDSHPHINSLH-------EVLLGDKLAYLVFPP-CSGDLHSY 59
              + +E          +L  HP+I           E     +  +L+    C G L  +
Sbjct: 69  NRAIIQEVC-----FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEF 123

Query: 60  V---RQRKRLKEAEARKLFRQIAETVRACHAQG--IVLRDLKL 97
           +     R  L      K+F Q    V+  H Q   I+ RDLK+
Sbjct: 124 LKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKV 166

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 59.2 bits (144), Expect = 8e-12
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRK-RLKEAEARKLFRQIAETVRAC 85
            H +I  LHE     +   ++F   SG D+   +      L E E      Q+ E ++  
Sbjct: 59  RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H+  I   D++    ++  
Sbjct: 119 HSHNIGHFDIRPENIIYQT 137

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 58.8 bits (142), Expect = 1e-11
 Identities = 14/94 (14%), Positives = 27/94 (28%), Gaps = 6/94 (6%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR-----LKEAEARKLFRQI 78
           +          +   L    + LV    S G L + +   K      + +        ++
Sbjct: 122 KPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRM 181

Query: 79  AETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHE 112
              +   H   I+  D+K   F+  N       E
Sbjct: 182 LYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDE 215

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            H +I  L++V+   K   LVF     DL   +   +  L+   A+    Q+   +  CH
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117

Query: 87  AQGIVLRDLK 96
            + ++ RDLK
Sbjct: 118 DRRVLHRDLK 127

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 57.9 bits (141), Expect = 2e-11
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            H +I  LH+VL  DK   LVF  C  DL  Y       L     +    Q+ + +  CH
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118

Query: 87  AQGIVLRDLK 96
           ++ ++ RDLK
Sbjct: 119 SRNVLHRDLK 128

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            HP+I SL +V+  ++   LVF     DL   + + K  L++++ +    Q+   V  CH
Sbjct: 77  HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136

Query: 87  AQGIVLRDLK 96
              I+ RDLK
Sbjct: 137 QHRILHRDLK 146

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            H +I +LH+++  +K   LVF     DL  Y+      +     +    Q+   +  CH
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117

Query: 87  AQGIVLRDLK 96
            Q ++ RDLK
Sbjct: 118 RQKVLHRDLK 127

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR--LKEAEARKLFRQIAETVRAC 85
           +HP+I  L +V+  +   YLVF     DL  ++       +     +    Q+ + +  C
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119

Query: 86  HAQGIVLRDLK 96
           H+  ++ RDLK
Sbjct: 120 HSHRVLHRDLK 130

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 22  AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYV-RQRKRLKEAEARKLFRQIAE 80
           +H ++  HP    L +      + YL    C   L  +       L EA+     R    
Sbjct: 109 SHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL 168

Query: 81  TVRACHAQGIVLRDLK 96
            +   H+QG+V  D+K
Sbjct: 169 ALAHLHSQGLVHLDVK 184

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 56.6 bits (137), Expect = 6e-11
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 15/84 (17%)

Query: 28  SHPHINSLHEVLLGDKLA-------------YLVFPPCS-GDLHSYVRQRKR-LKEAEAR 72
           +H ++   +   L  +               ++    C  G L+  +       +  E  
Sbjct: 60  NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119

Query: 73  KLFRQIAETVRACHAQGIVLRDLK 96
           +LFRQI E +   H+QGI+ RDLK
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLK 143

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.8 bits (137), Expect = 6e-11
 Identities = 24/118 (20%), Positives = 34/118 (28%), Gaps = 41/118 (34%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR--------------------- 65
            HP+I  L+EV   ++   LV   C  G L   +                          
Sbjct: 86  HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145

Query: 66  -------------------LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN 104
                               +E     + RQI   +   H QGI  RD+K   F+F  
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR------KRLKEAEARKLFRQIAET 81
            H +I  L++V+  +    LVF     DL  Y+  R      + L+    +    Q+ + 
Sbjct: 61  KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120

Query: 82  VRACHAQGIVLRDLK 96
           +  CH   I+ RDLK
Sbjct: 121 LAFCHENKILHRDLK 135

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEAEARKLFRQIAETVRACH 86
           SHP+I  L +         LVF     DL   ++     L  +  +       + +   H
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129

Query: 87  AQGIVLRDLK 96
              I+ RDLK
Sbjct: 130 QHWILHRDLK 139

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            H ++ +L EV    K  YLVF      +   +      L     +K   QI   +  CH
Sbjct: 82  RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141

Query: 87  AQGIVLRDLK 96
           +  I+ RD+K
Sbjct: 142 SHNIIHRDIK 151

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 25  RLDSHPHINSLHEVLLGDKLA-----YLVFPPCSGDLHSYVRQRKR--LKEAEARKLFRQ 77
               HP++  L +V    +        LVF     DL +Y+ +     L     + L RQ
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128

Query: 78  IAETVRACHAQGIVLRDLK 96
               +   HA  IV RDLK
Sbjct: 129 FLRGLDFLHANCIVHRDLK 147

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 25  RLDSHPHINSLHEVLLGDKLA-----YLVFPPCSGDLHSYVRQRKR--LKEAEARKLFRQ 77
               HP++  L +V    +        LVF     DL +Y+ +     +     + +  Q
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128

Query: 78  IAETVRACHAQGIVLRDLK 96
           +   +   H+  +V RDLK
Sbjct: 129 LLRGLDFLHSHRVVHRDLK 147

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 54.1 bits (131), Expect = 4e-10
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACH 86
            HP++ +L EV    +  +LVF  C   +   + + +R + E   + +  Q  + V  CH
Sbjct: 60  KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119

Query: 87  AQGIVLRDLK 96
               + RD+K
Sbjct: 120 KHNCIHRDVK 129

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 54.0 bits (130), Expect = 6e-10
 Identities = 7/79 (8%), Positives = 24/79 (30%), Gaps = 10/79 (12%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLK--------EAEARKLFRQI 78
            + +  +   ++      Y+++       +  +      L             + + + +
Sbjct: 101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSV 160

Query: 79  AETVRACHAQ-GIVLRDLK 96
             +    H +  I  RD+K
Sbjct: 161 LNSFSYIHNEKNICHRDVK 179

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 52.8 bits (127), Expect = 1e-09
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRK--RLKEAEARKLFRQIAETVRA 84
            HP+I    E    +   Y+V   C  GDL   +  +K    +E +    F QI   ++ 
Sbjct: 81  KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140

Query: 85  CHAQGIVLRDLK 96
            H + I+ RD+K
Sbjct: 141 VHDRKILHRDIK 152

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 52.3 bits (125), Expect = 2e-09
 Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 9/82 (10%)

Query: 25  RLDSHPHINSLHEVLLGDKLA--YLVFPPCSGD-------LHSYVRQRKRLKEAEARKLF 75
           +      +  +        +   + ++P    +       L S+    K L      +L 
Sbjct: 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLT 212

Query: 76  RQIAETVRACHAQGIVLRDLKL 97
            Q+   + + H  G+V   L+ 
Sbjct: 213 LQVIRLLASLHHYGLVHTYLRP 234

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 51.2 bits (122), Expect = 6e-09
 Identities = 14/82 (17%), Positives = 21/82 (25%), Gaps = 9/82 (10%)

Query: 25  RLDSHPHINSLHEVLLGDKLA--YLVFPPCSGDLHSYVR-------QRKRLKEAEARKLF 75
            + S P    L        +A   L+ P  S DL             R          L 
Sbjct: 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILT 200

Query: 76  RQIAETVRACHAQGIVLRDLKL 97
            Q+        ++G+V      
Sbjct: 201 AQLIRLAANLQSKGLVHGHFTP 222

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 50.7 bits (122), Expect = 8e-09
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 28  SHPHINSLHEVLLGDKLA--------YLVFPPCSGDLHSYVRQRK-RLKEAEARKLFRQI 78
            H ++ +L E+               YLVF  C  DL   +     +   +E +++ + +
Sbjct: 74  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 133

Query: 79  AETVRACHAQGIVLRDLK 96
              +   H   I+ RD+K
Sbjct: 134 LNGLYYIHRNKILHRDMK 151

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 49.7 bits (118), Expect = 2e-08
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 12/81 (14%)

Query: 29  HPHINSLHEVLLGDK-----LAYLVFPPCSGD-------LHSYVRQRKRLKEAEARKLFR 76
            P    +  V L ++       + ++P    +       L S+    K L      +L  
Sbjct: 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTL 218

Query: 77  QIAETVRACHAQGIVLRDLKL 97
           Q+   + + H  G+V   L+ 
Sbjct: 219 QVIRLLASLHHYGLVHTYLRP 239

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 11/80 (13%)

Query: 28  SHPHINSLHEVLLGDKLA--YLVFPPCSGDLHSYV---------RQRKRLKEAEARKLFR 76
            HP++ SL +V L       +L+F     DL   +         ++  +L     + L  
Sbjct: 76  KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLY 135

Query: 77  QIAETVRACHAQGIVLRDLK 96
           QI + +   HA  ++ RDLK
Sbjct: 136 QILDGIHYLHANWVLHRDLK 155

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           SH +I S+ +V   D   YLV     G  L  Y+     L    A     QI + ++  H
Sbjct: 69  SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128

Query: 87  AQGIVLRDLK 96
              IV RD+K
Sbjct: 129 DMRIVHRDIK 138

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 21  SAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR----LKEAEARKLF 75
            AH  L  H H+         D    +    C+ G L   + +  R     KEAE + L 
Sbjct: 62  YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 121

Query: 76  RQIAETVRACHAQGIVLRDLK 96
            Q+   +R  H+  +V  D+K
Sbjct: 122 LQVGRGLRYIHSMSLVHMDIK 142

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 48.4 bits (116), Expect = 5e-08
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 4   IVVVLEI-MSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS--------- 53
             V+  +  + E +   + A  +LD H +I   +    G           S         
Sbjct: 38  TYVIKRVKYNNEKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

Query: 54  --------GDLHSYVRQRK--RLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
                   G L  ++ +R+  +L +  A +LF QI + V   H++ ++ RDLK 
Sbjct: 97  IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR----LKEAEARKLFRQIAETV 82
           +HP++   +   + D    +V      GDL   ++  K+    + E    K F Q+   +
Sbjct: 90  NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149

Query: 83  RACHAQGIVLRDLK 96
              H++ ++ RD+K
Sbjct: 150 EHMHSRRVMHRDIK 163

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 48.1 bits (115), Expect = 6e-08
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 17/94 (18%)

Query: 21  SAHYRLDSHPHINSLHEVLLGDKLAYLVFPP------------CS-GDLHSYVRQRKRLK 67
            A  +L+ HP I       L       + P             C   +L  ++  R  ++
Sbjct: 55  KALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113

Query: 68  EAE---ARKLFRQIAETVRACHAQGIVLRDLKLR 98
           E E      +F QIAE V   H++G++ RDLK  
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPS 147

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
             PH+  +H+    D   Y+     +G DL + +R++  L    A  + RQI   + A H
Sbjct: 92  QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH 151

Query: 87  AQGIVLRDLK 96
           A G   RD+K
Sbjct: 152 AAGATHRDVK 161

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 27  DSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAE---ARKLFRQIAETV 82
            S  +     +        Y+    C   +L  ++ +R  L++ E      +F QIAE V
Sbjct: 118 FSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAV 177

Query: 83  RACHAQGIVLRDLKL 97
              H++G++ RDLK 
Sbjct: 178 EFLHSKGLMHRDLKP 192

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 45.7 bits (109), Expect = 4e-07
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 28  SHPHINSLHEV----LLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETV 82
           +HP I ++++          L Y+V     G  L   V     +    A ++     + +
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129

Query: 83  RACHAQGIVLRDLK 96
              H  GI+ RD+K
Sbjct: 130 NFSHQNGIIHRDVK 143

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 44.7 bits (106), Expect = 8e-07
 Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 3/70 (4%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
             P +  + +V+       +V     G  L              A +  + +A    A H
Sbjct: 89  DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAH 146

Query: 87  AQGIVLRDLK 96
             G+ L    
Sbjct: 147 RAGVALSIDH 156

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 12/81 (14%)

Query: 28  SHPHINSLHE--VLLGDKLAYLVFPPCS-GDLHSYVRQRKR----LKEAEARKLFRQIAE 80
            HP+I   ++  +   +   Y+V   C  GDL S + +  +    L E    ++  Q+  
Sbjct: 63  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122

Query: 81  TVRACHAQG-----IVLRDLK 96
            ++ CH +      ++ RDLK
Sbjct: 123 ALKECHRRSDGGHTVLHRDLK 143

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 40.6 bits (95), Expect = 3e-05
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 29  HPHINSLHEVLLGDKLA-----YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
           H H+  + ++++   +      Y+V      D     R    L E   + L   +   V+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVK 170

Query: 84  ACHAQGIVLRDLK 96
             H+ GI+ RDLK
Sbjct: 171 YVHSAGILHRDLK 183

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 40.7 bits (96), Expect = 3e-05
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 11/76 (14%)

Query: 28  SHPHINSLH-----EVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAET 81
           +HP +  LH     E     +L + V    + GDL  +++++++L E  AR    +I+  
Sbjct: 68  NHPFLVGLHSCFQTE----SRL-FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122

Query: 82  VRACHAQGIVLRDLKL 97
           +   H +GI+ RDLKL
Sbjct: 123 LNYLHERGIIYRDLKL 138

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 11/76 (14%)

Query: 28  SHPHINSLH-----EVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAET 81
           +HP +  LH     E     +L + V    + GDL  +++++++L E  AR    +I+  
Sbjct: 111 NHPFLVGLHSCFQTE----SRL-FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 165

Query: 82  VRACHAQGIVLRDLKL 97
           +   H +GI+ RDLKL
Sbjct: 166 LNYLHERGIIYRDLKL 181

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 25  RLDSHPHINSLHEVLL------GDKLAYLVFPPCSGDLHSYVRQRKRLKEA---EARKLF 75
           R+  HP++  L            +    LV       ++   R   +LK+       KL+
Sbjct: 87  RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146

Query: 76  R-QIAETVRACHAQGIVLRDLK 96
             Q+  ++   H+ GI  RD+K
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIK 168

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)

Query: 29  HPHINSLHEVLLGDKLA------YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
           H +I SL  V    K        YLV      +L   ++    L       L  Q+   +
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGI 177

Query: 83  RACHAQGIVLRDLK 96
           +  H+ GI+ RDLK
Sbjct: 178 KHLHSAGIIHRDLK 191

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           + P +  L      +   Y+V    +G ++ S++R+  R  E  AR    QI  T    H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158

Query: 87  AQGIVLRDLKL 97
           +  ++ RDLK 
Sbjct: 159 SLDLIYRDLKP 169

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 28  SHPHINSLHEV-----LLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAET 81
            HP I  +          GD + Y+V     G  L     Q+  L  AEA     +I   
Sbjct: 137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYLLEILPA 194

Query: 82  VRACHAQGIVLRDLK 96
           +   H+ G+V  DLK
Sbjct: 195 LSYLHSIGLVYNDLK 209

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 27  DSHPHINSLHEVL-LGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRA 84
              P +  LH      D+L Y V    +G DL  +++Q  R KE  A     +IA  +  
Sbjct: 399 GKPPFLTQLHSCFQTMDRL-YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457

Query: 85  CHAQGIVLRDLKL 97
             ++GI+ RDLKL
Sbjct: 458 LQSKGIIYRDLKL 470

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 6/74 (8%)

Query: 26  LDSHPHINSLHEVLL--GDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETV 82
           L   P+I +L +++     +   LVF   +  D        + L + + R    +I + +
Sbjct: 87  LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKAL 143

Query: 83  RACHAQGIVLRDLK 96
             CH+ GI+ RD+K
Sbjct: 144 DYCHSMGIMHRDVK 157

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 17/79 (21%)

Query: 28  SHPHINSLH-----EVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAET 81
            HP +  +      +    + L + V    + GDL  +++   +   + A   F   AE 
Sbjct: 76  EHPFLTHMFCTFQTK----ENL-FFVMEYLNGGDLMYHIQSCHKFDLSRAT--F-YAAEI 127

Query: 82  VRA---CHAQGIVLRDLKL 97
           +      H++GIV RDLKL
Sbjct: 128 ILGLQFLHSKGIVYRDLKL 146

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 27  DSHPHINSLHEVL-LGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRA 84
              P +  LH      D+L Y V    +G DL  +++Q  R KE  A   F   AE    
Sbjct: 78  GKPPFLTQLHSCFQTMDRL-YFVMEYVNGGDLMYHIQQVGRFKEPHAV--F-YAAEIAIG 133

Query: 85  C---HAQGIVLRDLKL 97
                ++GI+ RDLKL
Sbjct: 134 LFFLQSKGIIYRDLKL 149

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 10/79 (12%)

Query: 28  SHPHINSLHEVLL------GDKLAYLVFPPCSGDLHSYVRQRKRLKEA---EARKLFR-Q 77
            H +I  L            +    LV       ++   R   R K+       KL+  Q
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164

Query: 78  IAETVRACHAQGIVLRDLK 96
           +  ++   H+ GI  RD+K
Sbjct: 165 LFRSLAYIHSFGICHRDIK 183

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 17/79 (21%)

Query: 28  SHPHINSLH-----EVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAET 81
           +HP +  L           D+L + V    +G DL  ++++ +R  EA AR  F   AE 
Sbjct: 82  NHPFLTQLFCCFQTP----DRL-FFVMEFVNGGDLMFHIQKSRRFDEARAR--F-YAAEI 133

Query: 82  VRAC---HAQGIVLRDLKL 97
           + A    H +GI+ RDLKL
Sbjct: 134 ISALMFLHDKGIIYRDLKL 152

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 8/60 (13%)

Query: 42  DKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRAC---HAQGIVLRDLKL 97
            ++ +++     G +L S +R+ +R     A+  F   AE   A    H++ I+ RDLK 
Sbjct: 79  QQI-FMIMDYIEGGELFSLLRKSQRFPNPVAK--F-YAAEVCLALEYLHSKDIIYRDLKP 134

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 36.1 bits (84), Expect = 9e-04
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 29  HPHINSLHEVLLGDKLA------YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
           H ++  L +V             YLV P    DL   +  +    E + + L  Q+ + +
Sbjct: 82  HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGL 139

Query: 83  RACHAQGIVLRDLK 96
           +  H+ G+V RDLK
Sbjct: 140 KYIHSAGVVHRDLK 153

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	114
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.96
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.95
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.94
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.92
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.92
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.92
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.92
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.92
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.92
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.92
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.92
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.91
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.91
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.91
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.91
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.91
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.91
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.91
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.91
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.91
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.91
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.91
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.91
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.91
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.91
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.9
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.9
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.9
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.9
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.9
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.9
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.9
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.9
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.9
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.9
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.9
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.9
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.9
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.9
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.9
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.9
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.9
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.9
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.9
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.89
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.89
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.89
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.89
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.89
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.89
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.89
3bhy_A	283	Death-associated protein kinase 3; death associate	99.89
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.89
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
3niz_A	311	Rhodanese family protein; structural genomics, str	99.89
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.89
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.89
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.89
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.89
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.89
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.89
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.89
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.89
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.89
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.89
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.89
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.89
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.89
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.89
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.89
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.89
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.89
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.89
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.89
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.88
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.88
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.88
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.88
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.88
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.88
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.88
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.88
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.88
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.88
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.88
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.88
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.88
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.88
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.88
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.88
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.88
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.88
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.88
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.88
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.88
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.88
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.88
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.88
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.88
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.88
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.88
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.88
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.88
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.88
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.88
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.88
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.88
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.88
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.88
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.88
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.88
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.88
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.87
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.87
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.87
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.87
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.87
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.87
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.87
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.87
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.87
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.87
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.87
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.87
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.87
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.87
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.87
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.87
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.87
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.87
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.87
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.87
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.87
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.87
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.86
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.86
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.86
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.86
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.86
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.86
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.86
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.86
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.86
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.86
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.86
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.86
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.86
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.86
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.86
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.86
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.86
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.86
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.86
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.86
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.86
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.86
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.86
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.86
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.86
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.86
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.86
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.86
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.86
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.86
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.85
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.85
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.85
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.85
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.85
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.85
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.85
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.85
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.85
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.85
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.85
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.85
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.85
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.85
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.85
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.84
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.84
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.84
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.84
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.84
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.84
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.84
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.84
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.84
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.84
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.84
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.84
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.84
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.84
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.84
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.84
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.84
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.83
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.83
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.83
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.83
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.83
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.82
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.82
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.82
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.82
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.82
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.81
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.8
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.77
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.72
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.65
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.64
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.53
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.2
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.94
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.74
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.98
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.92
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.82
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.77
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.3
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.97
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.14
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	94.59
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.45
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	92.11
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.72
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	90.36
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	85.7
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	81.98
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	81.86

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=2e-31  Score=173.62  Aligned_cols=104  Identities=20%  Similarity=0.200  Sum_probs=96.4

Q ss_pred             CCcEEEEEEeccccc-hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIA   79 (114)
Q Consensus         2 t~~~~avK~~~~~~~-~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (114)
                      ||+.||||.++.+.. .+|+.++.++ +||||++++++|.+++.+|+||||+ +|+|.+++...+.+++..+..++.|++
T Consensus        82 ~g~~vAiK~i~~~~~~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~  160 (336)
T 4g3f_A           82 TGFQCAVKKVRLEVFRVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL  160 (336)
T ss_dssp             TCCEEEEEEEETTTCCTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             CCCEEEEEEECHHHhHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            789999999987654 4688888888 9999999999999999999999999 899999998888899999999999999


Q ss_pred             HHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         80 ETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        80 ~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|+.|+|+++|+||||||+|||++.++
T Consensus       161 ~aL~ylH~~~IiHRDlKp~NILl~~~g  187 (336)
T 4g3f_A          161 EGLEYLHTRRILHGDVKADNVLLSSDG  187 (336)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEECTTS
T ss_pred             HHHHHHHHCCceecccCHHHEEEeCCC
Confidence            999999999999999999999998765

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.97  E-value=3.2e-31  Score=171.11  Aligned_cols=106  Identities=21%  Similarity=0.316  Sum_probs=95.6

Q ss_pred             CCCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      .||+.||+|.+++..         ..+|+.++.++ +||||++++++|++.+.+|+||||+ +|+|.+++.+.+.+++..
T Consensus        55 ~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~  133 (311)
T 4aw0_A           55 ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC  133 (311)
T ss_dssp             TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHH
T ss_pred             CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHH
Confidence            378999999996432         23578888888 9999999999999999999999999 899999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|+|++||+||||||+|||++.++.
T Consensus       134 ~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~  170 (311)
T 4aw0_A          134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH  170 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCC
Confidence            9999999999999999999999999999999976553

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.97  E-value=1.4e-30  Score=165.81  Aligned_cols=105  Identities=31%  Similarity=0.494  Sum_probs=95.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+.||+|.+++..         ..+|+.++.++ +||||++++++|++++.+|+||||++|+|.+.+...+.+++..+.
T Consensus        37 ~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~  115 (275)
T 3hyh_A           37 TGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR  115 (275)
T ss_dssp             TCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCEEHHHHHHHSCSCCHHHHH
T ss_pred             CCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHHcCCCCHHHHH
Confidence            78999999996542         23478888888 999999999999999999999999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       116 ~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~  150 (275)
T 3hyh_A          116 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN  150 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHCCcccccCChHHeEECCCCC
Confidence            99999999999999999999999999999977653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.97  E-value=7.6e-30  Score=166.96  Aligned_cols=109  Identities=21%  Similarity=0.359  Sum_probs=94.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      ||+.||||.+....        ..+|+.++.++ +||||++++++|++++.+|+||||+ +|+|.+++...  ..+++..
T Consensus        48 ~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~  126 (350)
T 4b9d_A           48 DGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ  126 (350)
T ss_dssp             TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHH
T ss_pred             CCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHH
Confidence            68999999996543        22478888888 9999999999999999999999999 89999999654  3478999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-cccc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVGH  111 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~~  111 (114)
                      +..++.|++.|+.|+|++||+||||||+|||++.++. +++|
T Consensus       127 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~D  168 (350)
T 4b9d_A          127 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGD  168 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECS
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcc
Confidence            9999999999999999999999999999999977653 4443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.97  E-value=5.9e-30  Score=167.25  Aligned_cols=104  Identities=19%  Similarity=0.287  Sum_probs=93.8

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      ||+.||||.++...      ..+|+.++.++ +||||++++++|++++.+|+||||+ +|+|.+++.. +.+++..+..+
T Consensus        98 tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~  175 (346)
T 4fih_A           98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAV  175 (346)
T ss_dssp             TCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHH
T ss_pred             CCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHH
Confidence            78999999995432      34688888888 9999999999999999999999999 8999999865 67999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|||++||+||||||+|||++.++.
T Consensus       176 ~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~  208 (346)
T 4fih_A          176 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR  208 (346)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHCCcccccCCHHHEEECCCCC
Confidence            999999999999999999999999999976553

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.97  E-value=1.8e-29  Score=168.44  Aligned_cols=104  Identities=19%  Similarity=0.287  Sum_probs=93.6

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      ||+.||||.+....      ..+|+.++.++ +||||++++++|++.+.+|+||||| +|+|.+++.. +.+++..+..+
T Consensus       175 tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~  252 (423)
T 4fie_A          175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAV  252 (423)
T ss_dssp             TCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHH
T ss_pred             CCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHH
Confidence            78999999996432      33588888888 9999999999999999999999999 8999999865 56999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|||++||+||||||+|||++.++.
T Consensus       253 ~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~  285 (423)
T 4fie_A          253 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR  285 (423)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSTTTEEECTTCC
T ss_pred             HHHHHHHHHHHHHCCeecccCCHHHEEEcCCCC
Confidence            999999999999999999999999999976653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.97  E-value=2.6e-30  Score=166.54  Aligned_cols=105  Identities=19%  Similarity=0.329  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      |++.||+|.+++..        ...|+.++.++ +||||++++++|++++.+|+||||+ +|+|.+++.+.+.+++..+.
T Consensus        51 ~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~  129 (304)
T 3ubd_A           51 ARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK  129 (304)
T ss_dssp             TTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHH
T ss_pred             CCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHH
Confidence            57899999986542        22467677777 9999999999999999999999999 89999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       130 ~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~  164 (304)
T 3ubd_A          130 FYLAELALALDHLHSLGIIYRDLKPENILLDEEGH  164 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCC
Confidence            99999999999999999999999999999977653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=6.4e-29  Score=159.28  Aligned_cols=109  Identities=23%  Similarity=0.268  Sum_probs=93.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|.+....        ..+|+.++.++ +||||++++++|++    ++.+++||||+ +|+|.+++.+.+.+++
T Consensus        50 ~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~  128 (290)
T 3fpq_A           50 TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI  128 (290)
T ss_dssp             TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCH
Confidence            68899999986432        23478888888 99999999999975    35689999999 8999999988788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEec-C-Cccccc
Q psy14425         69 AEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCN-A-QRSVGH  111 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~-~-~~~~~~  111 (114)
                      ..+..++.|++.|+.|+|+++  |+||||||+|||++. + ..+++|
T Consensus       129 ~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~D  175 (290)
T 3fpq_A          129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD  175 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEe
Confidence            999999999999999999998  999999999999974 3 344543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=8.4e-29  Score=159.39  Aligned_cols=109  Identities=22%  Similarity=0.292  Sum_probs=93.7

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      +|+.||||.++...      ..+|+.++.++ +||||+++++++.+++.+++||||+ +|+|.+++...           
T Consensus        42 ~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~  120 (299)
T 4asz_A           42 DKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN  120 (299)
T ss_dssp             -CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----
T ss_pred             CCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccC
Confidence            47789999996543      23578888888 9999999999999999999999999 99999999653           


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         64 --KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        64 --~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                        ..+++.....++.|++.|+.|||+++++||||||+|||++.++ .+++|
T Consensus       121 ~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A          121 PPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence              3589999999999999999999999999999999999997654 34443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=4.7e-28  Score=157.67  Aligned_cols=105  Identities=19%  Similarity=0.211  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      +|+.||||.++...      ..+|+.++.++ +||||+++++++.+++.+++||||+ +|+|.+++...           
T Consensus        70 ~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~  148 (329)
T 4aoj_A           70 DKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE  148 (329)
T ss_dssp             -CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC--------
T ss_pred             CCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccc
Confidence            57889999997543      23578888888 9999999999999999999999999 99999998643           


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         64 ----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        64 ----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                          +.+++.....++.|++.|+.|||+++++||||||+|||++.++.
T Consensus       149 ~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~  196 (329)
T 4aoj_A          149 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV  196 (329)
T ss_dssp             ---CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCc
Confidence                34899999999999999999999999999999999999987653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.96  E-value=9.8e-28  Score=154.45  Aligned_cols=109  Identities=23%  Similarity=0.347  Sum_probs=90.1

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCC------------EEEEEecCC-CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDK------------LAYLVFPPC-SGDLHSYVR   61 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~------------~~~~v~e~~-~~~l~~~~~   61 (114)
                      ||+.||||.++....       .+|+.++.++ +||||++++++|...+            .+|++|||+ +|+|.+++.
T Consensus        29 ~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~  107 (299)
T 4g31_A           29 DDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN  107 (299)
T ss_dssp             TCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHH
T ss_pred             CCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHH
Confidence            689999999864432       2478888888 9999999999997543            479999999 899999997


Q ss_pred             hCCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         62 QRKR---LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        62 ~~~~---~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                      ....   .+...+..++.|++.|+.|+|++|++||||||+|||++.++ .+++|
T Consensus       108 ~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A          108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             TCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             hcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence            6544   45667889999999999999999999999999999997655 34443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.95  E-value=9.1e-28  Score=159.65  Aligned_cols=105  Identities=19%  Similarity=0.285  Sum_probs=92.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      ||+.||||+++...        ..+|+.++..+ +||||+++++++..      .+.+|+||||++|+|.+++...+.++
T Consensus        78 t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~  156 (398)
T 4b99_A           78 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT  156 (398)
T ss_dssp             TCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSSCCC
T ss_pred             CCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcCCCC
Confidence            79999999996442        12478888888 99999999999864      36799999999889999998888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..+..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       157 ~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~  196 (398)
T 4b99_A          157 LEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE  196 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCC
Confidence            9999999999999999999999999999999999976653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=1.4e-27  Score=154.31  Aligned_cols=109  Identities=23%  Similarity=0.362  Sum_probs=91.9

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----------   63 (114)
                      +++.||||.++...       ..+|+.++.++ +||||+++++++..++.+++||||+ +|+|.+++...          
T Consensus        55 ~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~  133 (308)
T 4gt4_A           55 QTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD  133 (308)
T ss_dssp             -CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC---
T ss_pred             CCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccc
Confidence            46789999986432       23478888888 9999999999999999999999999 99999999542          


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         64 ------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        64 ------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                            ..+++.....++.|++.|+.|||+++++||||||+|||+++++ .+++|
T Consensus       134 ~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~D  188 (308)
T 4gt4_A          134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD  188 (308)
T ss_dssp             --CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECC
Confidence                  3488999999999999999999999999999999999997654 34443

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.95  E-value=1.9e-27  Score=165.63  Aligned_cols=105  Identities=20%  Similarity=0.221  Sum_probs=91.3

Q ss_pred             CCcEEEEEEeccccch---------hH---HHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREASG---------NL---LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|++++....         .|   +.++..+ +||||++++++|++.+.+|+||||+ ||+|.+++...+.+++
T Consensus       213 tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E  291 (689)
T 3v5w_A          213 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE  291 (689)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCH
T ss_pred             CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCH
Confidence            7999999999654311         12   2233334 8999999999999999999999999 9999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..+..++.|++.|+.|||++||+||||||+|||++.++.
T Consensus       292 ~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~  330 (689)
T 3v5w_A          292 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH  330 (689)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCC
Confidence            999999999999999999999999999999999977654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.94  E-value=1.2e-26  Score=152.72  Aligned_cols=101  Identities=14%  Similarity=0.209  Sum_probs=90.5

Q ss_pred             CCcEEEEEEeccccc----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      |++.||+|.+.....    .+|+..+..+.+||||++++++|.+.+.+++||||+ +++|.+++   +.+++..++.++.
T Consensus        48 ~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~  124 (361)
T 4f9c_A           48 PEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYML  124 (361)
T ss_dssp             CEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHH
T ss_pred             CCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHH
Confidence            568899999865432    357888888878999999999999999999999999 89999998   3599999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      |++.|+.|+|++|++||||||+|||++.+
T Consensus       125 qll~al~ylH~~gIiHRDiKPeNiLl~~~  153 (361)
T 4f9c_A          125 NLFKALKRIHQFGIVHRDVKPSNFLYNRR  153 (361)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred             HHHHHHHHHHHCCeEeCcCCHHHeEEeCC
Confidence            99999999999999999999999999765

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=3.4e-26  Score=147.65  Aligned_cols=101  Identities=17%  Similarity=0.170  Sum_probs=87.0

Q ss_pred             cEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          4 IVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      ..||||.++...        ..+|+.++.++ +||||+++++++.. +.+++||||+ +|+|.+++... ..+++.....
T Consensus        59 ~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~  136 (307)
T 3omv_A           59 GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID  136 (307)
T ss_dssp             SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHH
T ss_pred             CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHH
Confidence            468999986432        22478888888 99999999998754 5689999999 89999999654 5699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||+++++||||||+|||++.++
T Consensus       137 i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~  169 (307)
T 3omv_A          137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGL  169 (307)
T ss_dssp             HHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTE
T ss_pred             HHHHHHHHHHHHHHCCccCCccCHHHEEECCCC
Confidence            999999999999999999999999999998765

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.94  E-value=5.4e-26  Score=156.89  Aligned_cols=103  Identities=20%  Similarity=0.329  Sum_probs=92.2

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      ||+.||+|.+....      ..+|+.++..+ +||||++++++|++.+.++++|||+ +|+|.+++.. .+.+++..+..
T Consensus       181 tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~  259 (573)
T 3uto_A          181 TGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE  259 (573)
T ss_dssp             TCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHH
T ss_pred             CCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHH
Confidence            78999999986543      23478888887 9999999999999999999999999 8999998864 46799999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      ++.|++.|+.|||+++++||||||+|||++.+
T Consensus       260 ~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~  291 (573)
T 3uto_A          260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTK  291 (573)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEESSS
T ss_pred             HHHHHHHHHHHHHHCCeeeccCChhhccccCC
Confidence            99999999999999999999999999999753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=3.2e-26  Score=147.66  Aligned_cols=107  Identities=21%  Similarity=0.222  Sum_probs=88.0

Q ss_pred             CCcEEEEEEeccccchh-----HHHHHhhhCCCCCcceEEEEEEcCC----EEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASGN-----LLSAHYRLDSHPHINSLHEVLLGDK----LAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~-----e~~~~~~~~~h~~i~~~~~~~~~~~----~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||||.++......     |+..+.++ +||||+++++++..++    .+++||||+ +|+|.+++.. ..+++...
T Consensus        25 ~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~  102 (303)
T 3hmm_A           25 RGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGM  102 (303)
T ss_dssp             TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHH
T ss_pred             CCEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-CCCCHHHH
Confidence            57899999997654322     33334455 9999999999997543    689999999 8999999966 56899999


Q ss_pred             HHHHHHHHHHHHHHHHC--------CCccCCCCCCcEEEecCCc-ccc
Q psy14425         72 RKLFRQIAETVRACHAQ--------GIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~--------~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      ..++.|++.|+.|+|++        +++||||||+|||++.++. +++
T Consensus       103 ~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~  150 (303)
T 3hmm_A          103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence            99999999999999987        8999999999999976653 444

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=5.7e-26  Score=156.67  Aligned_cols=103  Identities=12%  Similarity=0.072  Sum_probs=90.5

Q ss_pred             CCcEEEEEEecccc----------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC
Q psy14425          2 AGIVVVLEIMSREA----------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK   64 (114)
Q Consensus         2 t~~~~avK~~~~~~----------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~   64 (114)
                      +|+.+|+|.+..+.                ..+|++.+.++..|+||+++++++++++..|+||||+ |++|.+++...+
T Consensus       258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~  337 (569)
T 4azs_A          258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE  337 (569)
T ss_dssp             ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC
T ss_pred             ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC
Confidence            57889999996542                2247888888888999999999999999999999999 899999998888


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++..   .++.|++.|+.|+|++||+||||||+|||++.++.
T Consensus       338 ~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~  377 (569)
T 4azs_A          338 EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQH  377 (569)
T ss_dssp             CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSC
T ss_pred             CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCC
Confidence            88765   47899999999999999999999999999977653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=7.9e-26  Score=148.36  Aligned_cols=109  Identities=16%  Similarity=0.206  Sum_probs=89.9

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC----------
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~----------   63 (114)
                      ++.||||.+.....       .+|+.++.++.+||||++++++|.. ++.+++||||| +|+|.+++...          
T Consensus        94 ~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~  173 (353)
T 4ase_A           94 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA  173 (353)
T ss_dssp             EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC---
T ss_pred             CeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhccccccccccc
Confidence            46899999965432       2477788888566999999999865 46799999999 89999999642          


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-ccccc
Q psy14425         64 ------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVGH  111 (114)
Q Consensus        64 ------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~~  111 (114)
                            ..+++.....++.|++.|+.|+|+++++||||||+|||++.++ .+++|
T Consensus       174 ~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~D  228 (353)
T 4ase_A          174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD  228 (353)
T ss_dssp             ----CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             chhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECc
Confidence                  2378999999999999999999999999999999999997654 44443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.92  E-value=2.7e-24  Score=139.80  Aligned_cols=104  Identities=33%  Similarity=0.506  Sum_probs=93.3

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+.||+|.+.....        .+|+..+..+ +||||+++++++.+.+.++++||++ +++|.+++...+.+++..+.
T Consensus        39 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~  117 (328)
T 3fe3_A           39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR  117 (328)
T ss_dssp             TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHH
T ss_pred             CCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHH
Confidence            789999999965431        2467777777 9999999999999999999999999 89999999877889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       118 ~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~  151 (328)
T 3fe3_A          118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM  151 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC
Confidence            9999999999999999999999999999997654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.92  E-value=4.8e-24  Score=138.36  Aligned_cols=105  Identities=27%  Similarity=0.482  Sum_probs=94.0

Q ss_pred             CCcEEEEEEecccc---chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA---SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQ   77 (114)
Q Consensus         2 t~~~~avK~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~   77 (114)
                      +|+.||+|.+....   ..+|+..+..+.+||||+++++++.+.+..+++||++ +++|.+++...+.+++..+..++.|
T Consensus        35 ~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~q  114 (325)
T 3kn6_A           35 SNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK  114 (325)
T ss_dssp             TCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHH
T ss_pred             CCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHH
Confidence            68999999997653   3357888888856999999999999999999999999 8899999988888999999999999


Q ss_pred             HHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         78 IAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        78 ~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|+.|||++|++||||||+||+++.++
T Consensus       115 i~~~l~~LH~~~ivH~Dlkp~NIll~~~~  143 (325)
T 3kn6_A          115 LVSAVSHMHDVGVVHRDLKPENLLFTDEN  143 (325)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEEEC--
T ss_pred             HHHHHHHHHHCCCeecCCCHHHEEEecCC
Confidence            99999999999999999999999997654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.92  E-value=4.1e-24  Score=139.66  Aligned_cols=104  Identities=27%  Similarity=0.427  Sum_probs=94.5

Q ss_pred             CCcEEEEEEeccc--cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSRE--ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQI   78 (114)
Q Consensus         2 t~~~~avK~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (114)
                      ||+.||+|.+...  ...+|+..+.++.+||||++++++|.+++.++++||++ +++|.+.+...+.+++..+..++.|+
T Consensus        46 ~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi  125 (342)
T 2qr7_A           46 TNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI  125 (342)
T ss_dssp             TTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHH
T ss_pred             CCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHH
Confidence            6889999999654  34568888888878999999999999999999999999 88999999887889999999999999


Q ss_pred             HHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         79 AETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        79 ~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      +.|+.|||++|++||||||+||++.+.
T Consensus       126 ~~al~~lH~~givHrDlkp~NIl~~~~  152 (342)
T 2qr7_A          126 TKTVEYLHAQGVVHRDLKPSNILYVDE  152 (342)
T ss_dssp             HHHHHHHHHTTEECSCCCGGGEEESSS
T ss_pred             HHHHHHHHHCCcEeccCCHHHEEEecC
Confidence            999999999999999999999998543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.92  E-value=2.9e-24  Score=140.94  Aligned_cols=106  Identities=21%  Similarity=0.329  Sum_probs=93.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.+..         ...|..++..+.+||||++++++|.+.+.++++|||+ +++|.+++...+.+++..+
T Consensus        47 ~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  126 (353)
T 3txo_A           47 TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA  126 (353)
T ss_dssp             TCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            68999999996542         1135666666668999999999999999999999999 8899999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       127 ~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~  162 (353)
T 3txo_A          127 RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH  162 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCC
Confidence            999999999999999999999999999999977653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.92  E-value=3.3e-24  Score=141.03  Aligned_cols=104  Identities=23%  Similarity=0.377  Sum_probs=93.7

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|.+....            ..+|+..+.++ +||||++++++|.+.+.++++||++ +++|.+++...+.+++
T Consensus        36 ~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~  114 (361)
T 2yab_A           36 TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE  114 (361)
T ss_dssp             TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBH
T ss_pred             CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCH
Confidence            68999999986532            23577778777 8999999999999999999999999 8999999987788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       115 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~  152 (361)
T 2yab_A          115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC
Confidence            99999999999999999999999999999999997655

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.92  E-value=5.5e-24  Score=141.50  Aligned_cols=106  Identities=21%  Similarity=0.355  Sum_probs=94.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|++++..         ...|..++.++.+||||++++++|.+.+.+++||||+ +|+|...+...+.+++..+
T Consensus        76 ~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~  155 (396)
T 4dc2_A           76 TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA  155 (396)
T ss_dssp             TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHH
Confidence            68899999996542         2246666777779999999999999999999999999 8899999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       156 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~  191 (396)
T 4dc2_A          156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH  191 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCC
Confidence            999999999999999999999999999999977653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.92  E-value=8e-24  Score=136.26  Aligned_cols=105  Identities=22%  Similarity=0.356  Sum_probs=94.1

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.||+|.+....      ..+|+..+.++.+||||+++++++...+.++++||++ +++|.+++.....++...+..+
T Consensus        37 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i  116 (316)
T 2ac3_A           37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV  116 (316)
T ss_dssp             SCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHH
T ss_pred             CCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHH
Confidence            68899999996543      2247777877668999999999999999999999999 8999999987778999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|||+++++||||||+||+++.++
T Consensus       117 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~  148 (316)
T 2ac3_A          117 VQDVASALDFLHNKGIAHRDLKPENILCEHPN  148 (316)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEESCSS
T ss_pred             HHHHHHHHHHHHhCCceeCCCCHHHEEEccCC
Confidence            99999999999999999999999999997655

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=7.5e-24  Score=139.18  Aligned_cols=104  Identities=28%  Similarity=0.418  Sum_probs=93.5

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~   75 (114)
                      ||+.||+|.+....     ..+|+..+..+ +||||+++++++.+.+.++++|||+ +++|.+++...+.++...++.++
T Consensus        44 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  122 (361)
T 3uc3_A           44 TKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFF  122 (361)
T ss_dssp             TCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            68999999997543     23567777777 9999999999999999999999999 88999999877889999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|||++|++||||||+||+++.++
T Consensus       123 ~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~  153 (361)
T 3uc3_A          123 QQLLSGVSYCHSMQICHRDLKLENTLLDGSP  153 (361)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCCGGGEEECSSS
T ss_pred             HHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            9999999999999999999999999997654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.92  E-value=8e-24  Score=138.43  Aligned_cols=106  Identities=21%  Similarity=0.357  Sum_probs=93.2

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+.+...         ..|..++.++.+||||++++++|.+.+.++++||++ +++|.+++...+.+++..+
T Consensus        33 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~  112 (345)
T 3a8x_A           33 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA  112 (345)
T ss_dssp             TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            688999999975431         235566666668999999999999999999999999 8899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       113 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~  148 (345)
T 3a8x_A          113 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH  148 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC
Confidence            999999999999999999999999999999976653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.91  E-value=1e-23  Score=136.82  Aligned_cols=104  Identities=22%  Similarity=0.369  Sum_probs=93.5

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+....            ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++...+.+++
T Consensus        35 ~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  113 (326)
T 2y0a_A           35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE  113 (326)
T ss_dssp             TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBH
T ss_pred             CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCH
Confidence            68999999986432            23577778877 9999999999999999999999999 8899999987778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       114 ~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  151 (326)
T 2y0a_A          114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  151 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC
Confidence            99999999999999999999999999999999997765

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.91  E-value=8.7e-24  Score=138.34  Aligned_cols=106  Identities=16%  Similarity=0.219  Sum_probs=93.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+++..         ...|...+....+||||++++++|.+.+.++++|||+ +|+|.+++...+.+++..+
T Consensus        41 ~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  120 (345)
T 1xjd_A           41 TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA  120 (345)
T ss_dssp             TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHH
Confidence            68899999996542         1235556666669999999999999999999999999 8999999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       121 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~  156 (345)
T 1xjd_A          121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH  156 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCC
Confidence            999999999999999999999999999999976653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.91  E-value=7.9e-24  Score=138.13  Aligned_cols=105  Identities=18%  Similarity=0.284  Sum_probs=92.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+.+..         ...|...+..+ +||||++++++|.+.+.++++|||+ +++|.+.+...+.+++..+
T Consensus        29 ~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  107 (337)
T 1o6l_A           29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA  107 (337)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHH
T ss_pred             CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            68999999996532         12356666666 9999999999999999999999999 8899999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       108 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~  143 (337)
T 1o6l_A          108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH  143 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCC
Confidence            999999999999999999999999999999976553

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.91  E-value=1.4e-23  Score=138.69  Aligned_cols=104  Identities=16%  Similarity=0.249  Sum_probs=92.0

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.||+|.+.....        .+|+.++..+ +||||++++++|...+.++++||++ +++|.+++...  ..+++..
T Consensus        51 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  129 (389)
T 3gni_B           51 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELA  129 (389)
T ss_dssp             TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHH
T ss_pred             CCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHH
Confidence            689999999965431        2367777777 9999999999999999999999999 89999999764  5699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|||++|++||||||+|||++.++
T Consensus       130 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~  165 (389)
T 3gni_B          130 IAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG  165 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999997655

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.91  E-value=2.2e-23  Score=137.08  Aligned_cols=104  Identities=28%  Similarity=0.492  Sum_probs=92.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+.++.++ +||||+++++++...+..+++||++ +++|.+.+.....+++..+.
T Consensus        53 ~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~  131 (362)
T 2bdw_A           53 TGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS  131 (362)
T ss_dssp             TCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHH
T ss_pred             CCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHH
Confidence            68899999996543        22467777777 9999999999999999999999999 88999999877789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||++|++||||||+||+++..+
T Consensus       132 ~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~  165 (362)
T 2bdw_A          132 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  165 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC
Confidence            9999999999999999999999999999997643

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.91  E-value=1e-23  Score=136.61  Aligned_cols=105  Identities=16%  Similarity=0.311  Sum_probs=92.5

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.+..         ..+|..++..+ +||||++++++|.+.+.++++||++ +++|.+++...+.+++..+
T Consensus        30 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~  108 (318)
T 1fot_A           30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA  108 (318)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHH
T ss_pred             CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHH
Confidence            68999999996542         11355566666 9999999999999999999999999 8899999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       109 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~  144 (318)
T 1fot_A          109 KFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH  144 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCC
Confidence            999999999999999999999999999999976553

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.91  E-value=8.7e-24  Score=137.90  Aligned_cols=104  Identities=31%  Similarity=0.474  Sum_probs=93.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+.||+|.+....         ..+|+..+..+ +||||+++++++.+.+..+++|||++|++.+.+...+.+++..+.
T Consensus        33 ~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~  111 (336)
T 3h4j_B           33 TQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR  111 (336)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCCEEHHHHHHHHCSCCHHHHH
T ss_pred             CCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECCCCcHHHHHHHcCCCCHHHHH
Confidence            68999999986432         23577777777 999999999999999999999999999999998877889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       112 ~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  145 (336)
T 3h4j_B          112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL  145 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC
Confidence            9999999999999999999999999999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.91  E-value=2.9e-23  Score=139.73  Aligned_cols=102  Identities=28%  Similarity=0.434  Sum_probs=92.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.+|+|.+....        ..+|+.++..+ +||||+++++++.+.+..+++||++ +++|.+.+...+.+++..+.
T Consensus        35 ~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~  113 (444)
T 3soa_A           35 AGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS  113 (444)
T ss_dssp             TTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHH
T ss_pred             CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHH
Confidence            68899999986543        22467777777 9999999999999999999999999 88999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      .++.|++.|+.|+|++|++||||||+||+++.
T Consensus       114 ~i~~qil~aL~~lH~~givHrDlKp~NIll~~  145 (444)
T 3soa_A          114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLAS  145 (444)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSSTTEEESB
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence            99999999999999999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.91  E-value=1.4e-23  Score=137.49  Aligned_cols=105  Identities=21%  Similarity=0.277  Sum_probs=93.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+....         ..+|..++..+ +||||++++++|.+.+.++++||++ +++|.+++...+.+++..+
T Consensus        65 ~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~  143 (350)
T 1rdq_E           65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA  143 (350)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHH
T ss_pred             CCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHH
Confidence            68999999986432         12366677777 9999999999999999999999999 8999999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       144 ~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~  179 (350)
T 1rdq_E          144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY  179 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCccceEEECCCCC
Confidence            999999999999999999999999999999976653

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.91  E-value=1.6e-23  Score=138.77  Aligned_cols=105  Identities=17%  Similarity=0.250  Sum_probs=93.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+....         ..+|+.++..+ +||||++++++|.+.+.++++||++ +++|..++...+.+++..+
T Consensus        39 ~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~  117 (384)
T 4fr4_A           39 TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV  117 (384)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHH
T ss_pred             CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence            68899999986432         22467777777 9999999999999999999999999 8999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       118 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~  153 (384)
T 4fr4_A          118 KLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH  153 (384)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCC
Confidence            999999999999999999999999999999977653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.91  E-value=2.9e-23  Score=132.95  Aligned_cols=104  Identities=23%  Similarity=0.275  Sum_probs=91.9

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++...+.++...+
T Consensus        35 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~  113 (294)
T 4eqm_A           35 LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA  113 (294)
T ss_dssp             TCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHH
T ss_pred             CCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHH
Confidence            68899999984332         22366666777 9999999999999999999999999 8899999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       114 ~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~  148 (294)
T 4eqm_A          114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK  148 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            99999999999999999999999999999997655

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3.9e-23  Score=133.92  Aligned_cols=102  Identities=16%  Similarity=0.185  Sum_probs=90.8

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      ||+.+|+|.+....     ..+|+..+..+ +||||+++++++.+.+.++++||++ +++|.+.+... ..+++..+..+
T Consensus        29 ~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i  107 (321)
T 1tki_A           29 SKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY  107 (321)
T ss_dssp             TTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHH
T ss_pred             CCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHH
Confidence            68899999986543     23477777777 9999999999999999999999999 88999999654 46999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +.|++.|+.|||++|++||||||+||+++.
T Consensus       108 ~~qi~~al~~lH~~givH~Dlkp~NIl~~~  137 (321)
T 1tki_A          108 VHQVCEALQFLHSHNIGHFDIRPENIIYQT  137 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCHHHEEEcc
Confidence            999999999999999999999999999975

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.91  E-value=3.2e-23  Score=134.47  Aligned_cols=104  Identities=20%  Similarity=0.306  Sum_probs=92.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++...+.++++||++.++|.+++.....++...+..
T Consensus        58 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~  136 (329)
T 3gbz_A           58 TNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKS  136 (329)
T ss_dssp             TTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHCTTCCHHHHHH
T ss_pred             CCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCCCCHHHHHhhcCCCCHHHHHH
Confidence            68899999986432        22577778877 9999999999999999999999999889999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++||||||+||+++.++
T Consensus       137 i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~  169 (329)
T 3gbz_A          137 FLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSD  169 (329)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC--
T ss_pred             HHHHHHHHHHHHHhCCEECCCCCHHHEEEecCC
Confidence            999999999999999999999999999996443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.91  E-value=3.7e-23  Score=134.24  Aligned_cols=104  Identities=18%  Similarity=0.295  Sum_probs=91.6

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|+.||+|.+....          ...|+..+..+ +||||+++++++...+.++++||++ +++|.+++...+.++...
T Consensus        44 ~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  122 (327)
T 3a62_A           44 TGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT  122 (327)
T ss_dssp             TTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHH
Confidence            68899999986542          22467777777 9999999999999999999999999 889999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       123 ~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~  158 (327)
T 3a62_A          123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG  158 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC
Confidence            999999999999999999999999999999997654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.91  E-value=3.2e-23  Score=138.43  Aligned_cols=105  Identities=22%  Similarity=0.294  Sum_probs=92.1

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~   70 (114)
                      ||+.||+|.+.+..         ...|..++..+ +||||++++++|.+.+.++++|||+ +|+|.+++... ..+++..
T Consensus        85 ~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~  163 (412)
T 2vd5_A           85 TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM  163 (412)
T ss_dssp             TCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHH
T ss_pred             CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHH
Confidence            68999999996432         22466667666 9999999999999999999999999 89999999764 4799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       164 ~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~  200 (412)
T 2vd5_A          164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH  200 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCC
Confidence            9999999999999999999999999999999977553

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.90  E-value=1.8e-23  Score=137.14  Aligned_cols=106  Identities=22%  Similarity=0.254  Sum_probs=92.3

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+.+...         ..|...+..+.+||+|++++++|.+.+.++++|||+ +|+|.+++...+.+++..+
T Consensus        44 ~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  123 (353)
T 2i0e_A           44 TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA  123 (353)
T ss_dssp             EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            578899999965421         135555665558999999999999999999999999 8899999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       124 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~  159 (353)
T 2i0e_A          124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH  159 (353)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCc
Confidence            999999999999999999999999999999977653

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.90  E-value=3.1e-23  Score=139.33  Aligned_cols=105  Identities=22%  Similarity=0.262  Sum_probs=92.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~   70 (114)
                      +|+.||+|.+.+..         ...|..++..+ +||||++++++|.+.+.+++||||+ +|+|.+++.. .+.+++..
T Consensus        98 ~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~  176 (437)
T 4aw2_A           98 ADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM  176 (437)
T ss_dssp             TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHH
T ss_pred             CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHH
Confidence            57899999986422         23466677766 9999999999999999999999999 9999999976 46799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       177 ~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~  213 (437)
T 4aw2_A          177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH  213 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCC
Confidence            9999999999999999999999999999999976553

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.90  E-value=6.1e-23  Score=131.64  Aligned_cols=103  Identities=17%  Similarity=0.225  Sum_probs=90.8

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.||+|.+....      ..+|+..+..+ +||||++++++|..++.++++||++ +++|.+++.. ..+++..+..+
T Consensus        44 ~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~  121 (297)
T 3fxz_A           44 TGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  121 (297)
T ss_dssp             TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHH
T ss_pred             CCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh-cCCCHHHHHHH
Confidence            68899999985433      22466677776 9999999999999999999999999 8999999866 46999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++||||||+||+++.++
T Consensus       122 ~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~  153 (297)
T 3fxz_A          122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDG  153 (297)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHhCCceeCCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.90  E-value=2.2e-23  Score=136.44  Aligned_cols=104  Identities=29%  Similarity=0.377  Sum_probs=89.7

Q ss_pred             CCcEEEEEEeccc-----------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCC
Q psy14425          2 AGIVVVLEIMSRE-----------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~-----------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~   65 (114)
                      +|+.||+|.+...           ...+|+.++..+ +||||+++++++...+.++++||++ +++|.+.+..    ...
T Consensus        48 ~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~  126 (351)
T 3c0i_A           48 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV  126 (351)
T ss_dssp             TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCC
T ss_pred             CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCC
Confidence            6899999998532           123577777777 9999999999999999999999999 8899877743    235


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++..+..++.|++.|+.|||+++++||||||+||+++.++
T Consensus       127 ~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~  167 (351)
T 3c0i_A          127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE  167 (351)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC
Confidence            89999999999999999999999999999999999997654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.90  E-value=9e-23  Score=131.19  Aligned_cols=104  Identities=19%  Similarity=0.243  Sum_probs=92.2

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+....      ..+|+..+.++ +||||+++++++..++..+++||++ +++|.+++.. ...+++.....
T Consensus        34 ~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  112 (310)
T 3s95_A           34 TGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS  112 (310)
T ss_dssp             TCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHH
T ss_pred             CCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHH
Confidence            68899999885433      22477777777 9999999999999999999999999 8899999976 46699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       113 i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~  145 (310)
T 3s95_A          113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK  145 (310)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSTTSEEECTTS
T ss_pred             HHHHHHHHHHHHHhCCccCCCCCcCeEEECCCC
Confidence            999999999999999999999999999997765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.90  E-value=2.4e-23  Score=137.47  Aligned_cols=106  Identities=20%  Similarity=0.271  Sum_probs=89.6

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+.+....         .|...+.+..+||||++++++|.+.+.++++|||+ +++|.+++...+.+++..+
T Consensus        62 ~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~  141 (373)
T 2r5t_A           62 EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA  141 (373)
T ss_dssp             TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            6789999999655321         12333334459999999999999999999999999 8899999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       142 ~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~  177 (373)
T 2r5t_A          142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH  177 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC
Confidence            999999999999999999999999999999976653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.90  E-value=3.9e-23  Score=137.94  Aligned_cols=104  Identities=18%  Similarity=0.230  Sum_probs=91.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+.+..         ...|..++..+ +||||++++++|.+.+.+++||||+ +|+|.+++.. ..+++..+
T Consensus        93 ~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~  170 (410)
T 3v8s_A           93 TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWA  170 (410)
T ss_dssp             TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHH
T ss_pred             CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHH
Confidence            68899999986421         22466677766 9999999999999999999999999 8999999865 56999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       171 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~  206 (410)
T 3v8s_A          171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH  206 (410)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCC
Confidence            999999999999999999999999999999976653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.90  E-value=7.3e-23  Score=132.74  Aligned_cols=105  Identities=12%  Similarity=0.095  Sum_probs=94.2

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~~   76 (114)
                      +|+.||+|.+....    ...|+..+.++.+|||++++++++...+..+++||+++++|.+++.. ...+++..+..++.
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~  112 (330)
T 2izr_A           33 TNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAI  112 (330)
T ss_dssp             TTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             CCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHH
Confidence            68899999986432    44688888888799999999999999999999999999999999976 36799999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |++.|+.|||++|++||||||+||+++.++
T Consensus       113 qi~~~l~~LH~~~iiHrDlkp~Nill~~~~  142 (330)
T 2izr_A          113 QLISRMEYVHSKNLIYRDVKPENFLIGRPG  142 (330)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEECCGG
T ss_pred             HHHHHHHHHHhCCeeccCCCHHHeeeccCC
Confidence            999999999999999999999999997665

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.90  E-value=5.9e-23  Score=132.74  Aligned_cols=104  Identities=21%  Similarity=0.346  Sum_probs=93.4

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+....            ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++.....+++
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  114 (321)
T 2a2a_A           36 TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE  114 (321)
T ss_dssp             TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEH
T ss_pred             CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCH
Confidence            68899999986432            23577777777 9999999999999999999999999 8899999988778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       115 ~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~  152 (321)
T 2a2a_A          115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN  152 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC
Confidence            99999999999999999999999999999999997765

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=4.4e-23  Score=131.90  Aligned_cols=103  Identities=14%  Similarity=0.111  Sum_probs=87.7

Q ss_pred             CCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.....         .+|+..+.++ +||||+++++++...+..+++|||+ +++|.+++.. + ......
T Consensus        55 ~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~-~~~~~~  131 (286)
T 3uqc_A           55 LDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-S-PSPVGA  131 (286)
T ss_dssp             TTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-C-CCHHHH
T ss_pred             CCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-C-CChHHH
Confidence            589999999965432         2356666666 9999999999999999999999999 7899999854 3 455678


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++.
T Consensus       132 ~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~  167 (286)
T 3uqc_A          132 IRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC
Confidence            889999999999999999999999999999987654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.90  E-value=2.6e-23  Score=140.04  Aligned_cols=104  Identities=21%  Similarity=0.279  Sum_probs=89.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc-----CCEEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG-----DKLAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+....        ..+|+.++..+ +||||+++++++..     .+.++++||+++++|.+++.....+++
T Consensus        77 ~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~  155 (458)
T 3rp9_A           77 EKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTE  155 (458)
T ss_dssp             --CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSCCCCH
T ss_pred             CCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCCCCCH
Confidence            68899999986532        22477788888 99999999999943     357999999999999999988788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.++.|++.|+.|||++|++||||||+|||++.++
T Consensus       156 ~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~  193 (458)
T 3rp9_A          156 LHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC  193 (458)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCC
Confidence            99999999999999999999999999999999997765

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.90  E-value=2.2e-23  Score=141.34  Aligned_cols=104  Identities=30%  Similarity=0.472  Sum_probs=93.2

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+....         ..+|+..+..+ +||||+++++++.+.+.++++||++ +++|.+++...+.+++..+
T Consensus        40 ~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~  118 (476)
T 2y94_A           40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKES  118 (476)
T ss_dssp             TCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHH
T ss_pred             CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHH
Confidence            78999999996432         22467777776 9999999999999999999999999 8999999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       119 ~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~  153 (476)
T 2y94_A          119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM  153 (476)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC
Confidence            99999999999999999999999999999997654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.90  E-value=9e-23  Score=129.38  Aligned_cols=105  Identities=20%  Similarity=0.298  Sum_probs=89.2

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----CCCCH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----KRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----~~~~~   68 (114)
                      +|+.||+|.+.....        ..|+..+..+.+||||+++++++...+..+++||++ +++|.+++...    ..+++
T Consensus        35 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  114 (289)
T 1x8b_A           35 DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKE  114 (289)
T ss_dssp             TCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCH
T ss_pred             CCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCH
Confidence            689999999875421        135555666669999999999999999999999999 88999999653    56999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       115 ~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~  152 (289)
T 1x8b_A          115 AELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS  152 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCC
Confidence            99999999999999999999999999999999997543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.90  E-value=3.3e-23  Score=134.33  Aligned_cols=104  Identities=19%  Similarity=0.331  Sum_probs=92.5

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+..+ +||||+++++++..++..+++||++ +++|.+++.....+++..+..
T Consensus        31 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  109 (323)
T 3tki_A           31 TEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR  109 (323)
T ss_dssp             TCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHH
T ss_pred             CCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHH
Confidence            68899999985432       33577777777 9999999999999999999999999 889999987777899999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++||||||+||+++.++
T Consensus       110 i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  142 (323)
T 3tki_A          110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERD  142 (323)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHCCccccccchHHEEEeCCC
Confidence            999999999999999999999999999997754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.90  E-value=7.5e-23  Score=133.90  Aligned_cols=102  Identities=26%  Similarity=0.394  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      +++.||+|.+....    ...|+..+.++ +||||+++++++..++..+++||++ +++|.+++...+.+++..+..++.
T Consensus        77 ~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~  155 (349)
T 2w4o_A           77 TQKPYALKVLKKTVDKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK  155 (349)
T ss_dssp             TCCEEEEEEEEC----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHH
T ss_pred             CCcEEEEEEeccchhHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHH
Confidence            57899999986543    33577778887 9999999999999999999999999 889999998777899999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      |++.|+.|+|++|++||||||+||+++.
T Consensus       156 qi~~~L~~LH~~~ivH~Dikp~NIll~~  183 (349)
T 2w4o_A          156 QILEAVAYLHENGIVHRDLKPENLLYAT  183 (349)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCGGGEEESS
T ss_pred             HHHHHHHHHHHCCeEecCCCcccEEEec
Confidence            9999999999999999999999999974

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.90  E-value=3.4e-23  Score=137.74  Aligned_cols=103  Identities=22%  Similarity=0.384  Sum_probs=89.9

Q ss_pred             CCcEEEEEEeccc-cchhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSRE-ASGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~-~~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      ||+.||+|.+... ...+|+..+.+..+||||++++++|..    .+.++++|||+ +++|.+++...+  .+++..+..
T Consensus        86 ~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~  165 (400)
T 1nxk_A           86 TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE  165 (400)
T ss_dssp             TCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHH
T ss_pred             CCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHH
Confidence            6889999999643 344677777777799999999999875    56799999999 889999997643  599999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|++.|+.|||++|++||||||+|||++.
T Consensus       166 i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~  196 (400)
T 1nxk_A          166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTS  196 (400)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHHCCccccCcCcceEEEec
Confidence            9999999999999999999999999999976

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.90  E-value=6.8e-23  Score=139.50  Aligned_cols=104  Identities=25%  Similarity=0.372  Sum_probs=92.3

Q ss_pred             CCcEEEEEEecccc-------------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVR   61 (114)
Q Consensus         2 t~~~~avK~~~~~~-------------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~   61 (114)
                      +|+.+|+|.+....                   ..+|+.++.++ +||||+++++++.+.+.++++||++ +++|.+.+.
T Consensus        60 ~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~  138 (504)
T 3q5i_A           60 GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII  138 (504)
T ss_dssp             TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH
T ss_pred             CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHH
Confidence            67899999986432                   12467777777 9999999999999999999999999 889999998


Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+.+++..+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       139 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  183 (504)
T 3q5i_A          139 NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN  183 (504)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTT
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCC
Confidence            778899999999999999999999999999999999999997765

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.90  E-value=1e-22  Score=130.02  Aligned_cols=105  Identities=25%  Similarity=0.383  Sum_probs=90.8

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +|+.||+|.+.....        .+|+..+.++ +||||+++++++.+++.++++||++.+++.+.+.. .+.+++..+.
T Consensus        26 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~  104 (292)
T 3o0g_A           26 THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK  104 (292)
T ss_dssp             TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHH
T ss_pred             CCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHH
Confidence            688999999964432        2467777777 99999999999999999999999997777777654 5679999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|++|++||||||+||+++.++.
T Consensus       105 ~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~  139 (292)
T 3o0g_A          105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE  139 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence            99999999999999999999999999999976643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.90  E-value=1.4e-22  Score=132.16  Aligned_cols=110  Identities=22%  Similarity=0.353  Sum_probs=94.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCC-CCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSH-PHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||+|.+....        ..+|+..+.++..| |||+++++++...+..+++||+.+++|.+++...+.+++....
T Consensus        32 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~  111 (343)
T 3dbq_A           32 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK  111 (343)
T ss_dssp             TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHSCCCCHHHHH
T ss_pred             CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHH
Confidence            57889999986442        22477778877333 8999999999999999999997699999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccccc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGH  111 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~~  111 (114)
                      .++.|++.|+.|||+++++||||||+|||++++..+++|
T Consensus       112 ~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~D  150 (343)
T 3dbq_A          112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLID  150 (343)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEee
Confidence            999999999999999999999999999999876555543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.2e-22  Score=133.10  Aligned_cols=105  Identities=19%  Similarity=0.350  Sum_probs=93.7

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|+.||+|.+....          ...|+..+..+.+||||+++++++...+.++++|||+ +++|.+++.....++...
T Consensus        81 ~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  160 (355)
T 1vzo_A           81 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE  160 (355)
T ss_dssp             TTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHH
T ss_pred             CCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHH
Confidence            68899999985432          2347888888867999999999999999999999999 889999998777899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|||+++++||||||+||+++.++
T Consensus       161 ~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  196 (355)
T 1vzo_A          161 VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG  196 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence            999999999999999999999999999999997654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.90  E-value=1.3e-22  Score=137.41  Aligned_cols=101  Identities=27%  Similarity=0.383  Sum_probs=91.5

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ..+|+.++.++ +||||+++++++...+..+++||++ +++|.+.+...+.+++..+
T Consensus        50 ~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  128 (484)
T 3nyv_A           50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA  128 (484)
T ss_dssp             TCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHH
T ss_pred             CCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHH
Confidence            68999999985432         22477778877 9999999999999999999999999 8999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      ..++.|++.|+.|||++|++||||||+||+++
T Consensus       129 ~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~  160 (484)
T 3nyv_A          129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLE  160 (484)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEe
Confidence            99999999999999999999999999999995

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.90  E-value=1.5e-22  Score=131.80  Aligned_cols=104  Identities=24%  Similarity=0.362  Sum_probs=93.2

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CC-CHHHHHHhCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SG-DLHSYVRQRKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~-~l~~~~~~~~~   65 (114)
                      +|+.||+|.+....              ...|+..+.++ +||||++++++|...+.++++||++ +| +|.+++...+.
T Consensus        48 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~  126 (335)
T 3dls_A           48 KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR  126 (335)
T ss_dssp             TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCC
T ss_pred             CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCC
Confidence            68899999986542              23488888888 9999999999999999999999998 55 99999988788


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++..+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       127 l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  167 (335)
T 3dls_A          127 LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF  167 (335)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC
Confidence            99999999999999999999999999999999999997664

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.89  E-value=7.8e-23  Score=134.57  Aligned_cols=104  Identities=17%  Similarity=0.213  Sum_probs=89.4

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-------CCC
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-------KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-------~~~   66 (114)
                      +++.||+|.+.....       ..|+.++.++ +||||+++++++...+..+++||++ +++|.+++...       ..+
T Consensus       100 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  178 (367)
T 3l9p_A          100 SPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL  178 (367)
T ss_dssp             CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCC
T ss_pred             cceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccc
Confidence            467899999864422       2366677777 9999999999999999999999999 88999999653       248


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +...+..++.|++.|+.|||++|++||||||+|||++.++
T Consensus       179 ~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  218 (367)
T 3l9p_A          179 AMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG  218 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC
Confidence            9999999999999999999999999999999999997544

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.89  E-value=6.1e-23  Score=137.57  Aligned_cols=104  Identities=19%  Similarity=0.232  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||||.+....        ..+|+..+..+ +||||+++++++...     +.++++||+++++|.+++.....+++
T Consensus        50 ~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~  128 (432)
T 3n9x_A           50 TEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTE  128 (432)
T ss_dssp             TTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHSSCCCCH
T ss_pred             CCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhccCCCCH
Confidence            68899999996532        22477778877 999999999999765     57999999998899999988778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.++.|++.|+.|||++|++||||||+|||++.++
T Consensus       129 ~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~  166 (432)
T 3n9x_A          129 EHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDC  166 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCC
Confidence            99999999999999999999999999999999997765

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.89  E-value=2.2e-22  Score=128.35  Aligned_cols=104  Identities=23%  Similarity=0.310  Sum_probs=91.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++...+..+++||++.++|.+++... +.++...+.
T Consensus        25 ~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~  103 (288)
T 1ob3_A           25 YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK  103 (288)
T ss_dssp             TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHH
T ss_pred             CCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHH
Confidence            58899999985432        12467777777 999999999999999999999999987999988754 669999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++||||||+||+++.++
T Consensus       104 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  137 (288)
T 1ob3_A          104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG  137 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999997654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.89  E-value=1.3e-22  Score=129.14  Aligned_cols=103  Identities=16%  Similarity=0.195  Sum_probs=89.9

Q ss_pred             cEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC-CCHHHHHHHH
Q psy14425          4 IVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR-LKEAEARKLF   75 (114)
Q Consensus         4 ~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~-~~~~~~~~~~   75 (114)
                      ..||+|.+....      ..+|+..+.++ +||||+++++++..++..+++||++ +++|.+++..... ++......++
T Consensus        41 ~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  119 (289)
T 4fvq_A           41 TEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA  119 (289)
T ss_dssp             EEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHH
T ss_pred             hhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHH
Confidence            579999986443      22466777777 9999999999999999999999999 7899999976544 9999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|++.|+.|||+++++||||||+||+++.++.
T Consensus       120 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  151 (289)
T 4fvq_A          120 KQLAAAMHFLEENTLIHGNVCAKNILLIREED  151 (289)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEEEECCB
T ss_pred             HHHHHHHHHHhhCCeECCCcCcceEEEecCCc
Confidence            99999999999999999999999999977764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.89  E-value=1.7e-22  Score=129.43  Aligned_cols=103  Identities=22%  Similarity=0.384  Sum_probs=91.0

Q ss_pred             CCcEEEEEEeccc-cchhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSRE-ASGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~-~~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      +|+.||+|.+... ...+|+..+.+..+||||+++++++..    .+.++++||++ +++|.+++....  .+++..+..
T Consensus        42 ~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  121 (299)
T 3m2w_A           42 TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE  121 (299)
T ss_dssp             TCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHH
T ss_pred             CCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHH
Confidence            6889999999654 344677777677799999999999976    67899999999 789999997653  599999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|++.|+.|+|++|++|+||||+||+++.
T Consensus       122 i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  152 (299)
T 3m2w_A          122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTS  152 (299)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCHHHEEEec
Confidence            9999999999999999999999999999976

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.89  E-value=1.3e-22  Score=133.20  Aligned_cols=103  Identities=16%  Similarity=0.083  Sum_probs=88.4

Q ss_pred             CCcEEEEEEeccccch---hHHHHHhhh--CCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-----CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREASG---NLLSAHYRL--DSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-----RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---~e~~~~~~~--~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-----~~~~~~~~   70 (114)
                      +++.||+|.+......   .|...+..+  ..|+|++.+++++..++..++||||+ +|+|.+++..     ...+++..
T Consensus        94 ~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~  173 (365)
T 3e7e_A           94 NKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGL  173 (365)
T ss_dssp             CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHH
T ss_pred             cCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHH
Confidence            5789999999765433   344444444  13899999999999999999999999 8999999963     45699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +..++.|++.|+.|||++|++||||||+|||++.
T Consensus       174 ~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN  207 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECG
T ss_pred             HHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecc
Confidence            9999999999999999999999999999999976

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.89  E-value=1.7e-22  Score=130.53  Aligned_cols=104  Identities=24%  Similarity=0.349  Sum_probs=90.8

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC------CCCCH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR------KRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~------~~~~~   68 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++..++.++++||++.++|.+++...      ..++.
T Consensus        29 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~  107 (317)
T 2pmi_A           29 TGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLEL  107 (317)
T ss_dssp             SCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCH
T ss_pred             CCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecCCCHHHHHHhccccccccCCCH
Confidence            68999999986432       22477778777 999999999999999999999999988999988542      34899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       108 ~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~  145 (317)
T 2pmi_A          108 NLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG  145 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCC
Confidence            99999999999999999999999999999999997654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.89  E-value=1.6e-22  Score=137.11  Aligned_cols=103  Identities=23%  Similarity=0.362  Sum_probs=92.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+.++.++ +||||+++++++...+.++++||++ +++|.+.+...+.+++..+.
T Consensus        46 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  124 (486)
T 3mwu_A           46 TQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA  124 (486)
T ss_dssp             TCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHH
T ss_pred             CCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHH
Confidence            68999999985321        22578888888 9999999999999999999999999 88999998777889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .++.|++.|+.|||++|++||||||+||+++..
T Consensus       125 ~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~  157 (486)
T 3mwu_A          125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESK  157 (486)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCchHHEEEecC
Confidence            999999999999999999999999999999543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.89  E-value=2.8e-22  Score=127.22  Aligned_cols=104  Identities=20%  Similarity=0.376  Sum_probs=92.9

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+....            ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+++.....++.
T Consensus        29 ~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  107 (283)
T 3bhy_A           29 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE  107 (283)
T ss_dssp             TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCH
Confidence            68899999986432            23467777777 8999999999999999999999999 8999999987778999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .....++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       108 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  145 (283)
T 3bhy_A          108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN  145 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC
Confidence            99999999999999999999999999999999997665

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.89  E-value=1.5e-22  Score=137.49  Aligned_cols=104  Identities=22%  Similarity=0.348  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.+|+|.+....        ..+|+..+..+ +||||++++++|...+.++++||++ +++|.+.+.....+++..+.
T Consensus        61 ~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~  139 (494)
T 3lij_A           61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA  139 (494)
T ss_dssp             TCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHH
T ss_pred             CCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHH
Confidence            68899999986432        22477777777 9999999999999999999999999 88999988777889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||++|++||||||+||+++..+
T Consensus       140 ~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  173 (494)
T 3lij_A          140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE  173 (494)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC
Confidence            9999999999999999999999999999996543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.89  E-value=1.9e-22  Score=139.24  Aligned_cols=105  Identities=19%  Similarity=0.175  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~   69 (114)
                      ||+.||+|.+.+..         ...|..++..+ +||||++++++|.+.+.++++|||+ +|+|.+++...+  .+++.
T Consensus       208 tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~  286 (576)
T 2acx_A          208 TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA  286 (576)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHH
T ss_pred             CCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHH
Confidence            68999999986432         22467777777 9999999999999999999999999 899999987644  49999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       287 ~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~  324 (576)
T 2acx_A          287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGH  324 (576)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCC
Confidence            99999999999999999999999999999999977553

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=1.7e-22  Score=133.12  Aligned_cols=105  Identities=18%  Similarity=0.289  Sum_probs=90.0

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      +..||+|.+......       .|+..+.++.+||||+++++++...+.++++|||+ +++|.+++....          
T Consensus       113 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  192 (370)
T 2psq_A          113 AVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI  192 (370)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC--------
T ss_pred             ceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccc
Confidence            457999999755322       36667777768999999999999999999999999 889999997543          


Q ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 ------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                            .++...+..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       193 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  241 (370)
T 2psq_A          193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV  241 (370)
T ss_dssp             ---CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCC
Confidence                  3788999999999999999999999999999999999976553

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.89  E-value=2e-22  Score=129.94  Aligned_cols=105  Identities=26%  Similarity=0.386  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++.+.+..+++||++.+++.+.+... ..+++..+.
T Consensus        44 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~  122 (311)
T 3niz_A           44 QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIK  122 (311)
T ss_dssp             TSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHH
T ss_pred             CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHH
Confidence            57899999986432        22477777777 999999999999999999999999988888888654 459999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       123 ~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~  157 (311)
T 3niz_A          123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA  157 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCC
Confidence            99999999999999999999999999999976653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.89  E-value=3.1e-22  Score=132.70  Aligned_cols=110  Identities=21%  Similarity=0.334  Sum_probs=94.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCC-CCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDS-HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~-h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||||.+....        ..+|+..+.++.. ||||+++++++...+.++++||+.+++|.+++.....+++....
T Consensus        79 ~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~  158 (390)
T 2zmd_A           79 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK  158 (390)
T ss_dssp             TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHCSSCCHHHHH
T ss_pred             CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecCCCCHHHHHHhcCCCCHHHHH
Confidence            47889999986542        2247777888743 69999999999999999999996688999999887889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccccc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGH  111 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~~  111 (114)
                      .++.|++.|+.|||+++++||||||+|||++++..+++|
T Consensus       159 ~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~D  197 (390)
T 2zmd_A          159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLID  197 (390)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECC
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEe
Confidence            999999999999999999999999999999766555543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.89  E-value=4.1e-22  Score=126.54  Aligned_cols=104  Identities=28%  Similarity=0.492  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+.+.....++...+.
T Consensus        30 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~  108 (284)
T 3kk8_A           30 TGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS  108 (284)
T ss_dssp             TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHH
T ss_pred             CCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHH
Confidence            58899999986543        22467777777 9999999999999999999999999 88999988777789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       109 ~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  142 (284)
T 3kk8_A          109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKA  142 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS
T ss_pred             HHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC
Confidence            9999999999999999999999999999997654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.89  E-value=8.5e-23  Score=137.25  Aligned_cols=104  Identities=19%  Similarity=0.275  Sum_probs=88.5

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ...|...+..+ +||||++++++|...+.+++||||+ +++|.+.+...+.+++..+
T Consensus       172 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  250 (446)
T 4ejn_A          172 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA  250 (446)
T ss_dssp             TCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHH
T ss_pred             CCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHH
Confidence            68899999986432         11345555555 8999999999999999999999999 8899999987788999999


Q ss_pred             HHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+ +|++||||||+|||++.++
T Consensus       251 ~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~  286 (446)
T 4ejn_A          251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG  286 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS
T ss_pred             HHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC
Confidence            9999999999999998 9999999999999997654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.89  E-value=4.5e-22  Score=127.09  Aligned_cols=105  Identities=25%  Similarity=0.402  Sum_probs=92.9

Q ss_pred             CCcEEEEEEecccc---------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC
Q psy14425          2 AGIVVVLEIMSREA---------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~---------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~   65 (114)
                      +|+.||+|.+....               ..+|+..+.++.+|||++++++++...+..+++||++ +++|.+++.....
T Consensus        41 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  120 (298)
T 1phk_A           41 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT  120 (298)
T ss_dssp             TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS
T ss_pred             cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCC
Confidence            68899999986432               1236667777756999999999999999999999999 7899999987778


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++......++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       121 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  161 (298)
T 1phk_A          121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM  161 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC
Confidence            99999999999999999999999999999999999997665

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.89  E-value=1.4e-22  Score=142.17  Aligned_cols=106  Identities=22%  Similarity=0.262  Sum_probs=92.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+++..         ...|..++..+.+||+|+.++++|++.+.+++||||+ +++|.+++...+.+++..+
T Consensus       365 ~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~  444 (674)
T 3pfq_A          365 TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA  444 (674)
T ss_dssp             SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHH
T ss_pred             CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHH
Confidence            67899999986532         1135556666668999999999999999999999999 8999999987788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       445 ~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~  480 (674)
T 3pfq_A          445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH  480 (674)
T ss_dssp             HHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSC
T ss_pred             HHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCc
Confidence            999999999999999999999999999999977653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.89  E-value=1.1e-22  Score=134.15  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++... ..++.....
T Consensus       138 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  216 (377)
T 3cbl_A          138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL  216 (377)
T ss_dssp             TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHH
T ss_pred             CCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHH
Confidence            58899999986442       33578888877 9999999999999999999999999 89999999754 459999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||++|++||||||+||+++.++
T Consensus       217 ~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~  250 (377)
T 3cbl_A          217 QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN  250 (377)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC
Confidence            9999999999999999999999999999997655

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.89  E-value=2.3e-22  Score=133.30  Aligned_cols=102  Identities=24%  Similarity=0.340  Sum_probs=90.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +|+.+|+|.+....      ..+|+.++..+ +||||++++++|...+.++++||++ +++|.+++... ..+++..+..
T Consensus        75 ~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~  153 (387)
T 1kob_A           75 TGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN  153 (387)
T ss_dssp             TCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHH
T ss_pred             CCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHH
Confidence            68899999986543      33577778777 9999999999999999999999999 88999998654 3699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|++.|+.|||++|++||||||+||+++.
T Consensus       154 i~~qi~~aL~~LH~~givHrDlkp~NIll~~  184 (387)
T 1kob_A          154 YMRQACEGLKHMHEHSIVHLDIKPENIMCET  184 (387)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHhCCeeecccchHHeEEec
Confidence            9999999999999999999999999999964

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.89  E-value=1.4e-22  Score=135.36  Aligned_cols=103  Identities=27%  Similarity=0.395  Sum_probs=89.8

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      ||+.||+|.+....              ..+|+..+.++ +||||+++++++.. +..+++||++ +++|.+.+...+.+
T Consensus       159 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~  236 (419)
T 3i6u_A          159 TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRL  236 (419)
T ss_dssp             TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSCCC
T ss_pred             CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccCCC
Confidence            68899999986432              23578888888 99999999999864 4578999999 88999988777889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++..+..++.|++.|+.|||+++++||||||+|||++..+
T Consensus       237 ~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~  276 (419)
T 3i6u_A          237 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE  276 (419)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC
Confidence            9999999999999999999999999999999999996543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.89  E-value=2.5e-22  Score=129.82  Aligned_cols=103  Identities=27%  Similarity=0.417  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      +|+.||+|.+....              ..+|+..+.++ +||||+++++++...+ .+++||++ +++|.+.+.....+
T Consensus        34 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~  111 (322)
T 2ycf_A           34 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRL  111 (322)
T ss_dssp             TTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCC
T ss_pred             CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCC
Confidence            67899999985432              23577788887 9999999999997665 89999999 78999998777789


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +......++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       112 ~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~  151 (322)
T 2ycf_A          112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE  151 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC
Confidence            9999999999999999999999999999999999997654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.89  E-value=4.4e-22  Score=128.87  Aligned_cols=103  Identities=19%  Similarity=0.256  Sum_probs=91.0

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.||||.+....      ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++.. ..+++..+..+
T Consensus        69 ~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i  146 (321)
T 2c30_A           69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATV  146 (321)
T ss_dssp             TCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHH
T ss_pred             CCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHH
Confidence            68999999986443      22467777777 9999999999999999999999999 8899998854 56999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|||+||+||+++.++
T Consensus       147 ~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  178 (321)
T 2c30_A          147 CEAVLQALAYLHAQGVIHRDIKSDSILLTLDG  178 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999997654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.89  E-value=4.6e-22  Score=128.21  Aligned_cols=105  Identities=19%  Similarity=0.253  Sum_probs=89.1

Q ss_pred             CCcEEEEEEeccccch--------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG--------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~--------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +|+.||||.+......        .++..+.+..+|||++++++++..++.++++||+++++|.+.+.. ...+++..+.
T Consensus        81 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~  160 (311)
T 3p1a_A           81 DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVW  160 (311)
T ss_dssp             TSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHH
T ss_pred             CCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHH
Confidence            6889999998543211        234445556699999999999999999999999998899998865 3469999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||+++++||||||+|||++.++
T Consensus       161 ~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~  194 (311)
T 3p1a_A          161 GYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG  194 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence            9999999999999999999999999999996654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.89  E-value=5.2e-22  Score=127.34  Aligned_cols=100  Identities=24%  Similarity=0.423  Sum_probs=90.5

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      +|+.||+|.+....      ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+.+...+.+++.....+
T Consensus        33 ~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  111 (304)
T 2jam_A           33 TGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV  111 (304)
T ss_dssp             TCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHH
T ss_pred             CCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHH
Confidence            68899999986542      33577778877 9999999999999999999999999 8899999877778999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEE
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVF  102 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~  102 (114)
                      +.|++.|+.|+|++|++|+||+|+||++
T Consensus       112 ~~qi~~~l~~lH~~~i~H~dikp~NIl~  139 (304)
T 2jam_A          112 IQQVLSAVKYLHENGIVHRDLKPENLLY  139 (304)
T ss_dssp             HHHHHHHHHHHHHTTCCCCSCCGGGCEE
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEE
Confidence            9999999999999999999999999999

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.89  E-value=4.2e-22  Score=127.99  Aligned_cols=105  Identities=22%  Similarity=0.337  Sum_probs=91.7

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+.||+|.+.....        .+|+..+.++ +|||++++++++...+..+++||++ ++++.+++.....++...+.
T Consensus        27 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  105 (311)
T 4agu_A           27 TGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK  105 (311)
T ss_dssp             TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHH
T ss_pred             CCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHH
Confidence            689999999854432        2467777777 9999999999999999999999999 67788887777789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|++|++|+||||+||+++.++.
T Consensus       106 ~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  140 (311)
T 4agu_A          106 SITWQTLQAVNFCHKHNCIHRDVKPENILITKHSV  140 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCC
Confidence            99999999999999999999999999999976553

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.89  E-value=6.3e-22  Score=130.19  Aligned_cols=106  Identities=28%  Similarity=0.448  Sum_probs=93.1

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      +|+.||||++....              ...|+..+.++.+||||+++++++...+..+++||++ +++|.+++.....+
T Consensus       118 ~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l  197 (365)
T 2y7j_A          118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVAL  197 (365)
T ss_dssp             TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSC
T ss_pred             CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCC
Confidence            68999999986432              1235666777768999999999999999999999999 88999999877789


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +...+..++.|++.|+.|+|+.|++|+|++|+||+++.++.
T Consensus       198 ~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~  238 (365)
T 2y7j_A          198 SEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ  238 (365)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence            99999999999999999999999999999999999977653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.89  E-value=2.6e-22  Score=130.38  Aligned_cols=104  Identities=25%  Similarity=0.269  Sum_probs=90.5

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----------   63 (114)
                      +++.||+|.+.....       .+|+..+.++ +||||+++++++...+..+++||++ +++|.+++...          
T Consensus        76 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  154 (343)
T 1luf_A           76 PFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH  154 (343)
T ss_dssp             SEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC--------
T ss_pred             CceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccc
Confidence            358899999975432       2467777777 9999999999999999999999999 88999999753          


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 --------------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 --------------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                                    ..+++.....++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       155 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~  211 (343)
T 1luf_A          155 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM  211 (343)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             ccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCC
Confidence                          4589999999999999999999999999999999999997654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.89  E-value=7.7e-22  Score=125.93  Aligned_cols=105  Identities=14%  Similarity=0.130  Sum_probs=93.4

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~   76 (114)
                      +|+.||+|.+....    ..+|+..+..+.+|++++.+++++..+...+++||+++++|.+++...+ .++...+..++.
T Consensus        34 ~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~  113 (298)
T 1csn_A           34 NNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAK  113 (298)
T ss_dssp             TTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             CCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHH
Confidence            68899999986432    3457888888878999999999999999999999999999999997644 599999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      |++.|+.|+|++|++||||||+||+++.++
T Consensus       114 qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  143 (298)
T 1csn_A          114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPN  143 (298)
T ss_dssp             HHHHHHHHHHTTTEECCCCCGGGEEECCSS
T ss_pred             HHHHHHHHHHhCCEecCCCCHHHEEeccCC
Confidence            999999999999999999999999997654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.89  E-value=2.1e-22  Score=131.52  Aligned_cols=105  Identities=16%  Similarity=0.221  Sum_probs=89.2

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCC-EEEEEecCC-CCCHHHHHHhCCC-------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDK-LAYLVFPPC-SGDLHSYVRQRKR-------   65 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~v~e~~-~~~l~~~~~~~~~-------   65 (114)
                      +++.||+|.+....       ..+|+..+.++.+||||+++++++...+ ..+++|||+ +++|.+++.....       
T Consensus        51 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~  130 (359)
T 3vhe_A           51 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT  130 (359)
T ss_dssp             CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-
T ss_pred             cceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhcccccccccc
Confidence            46889999997543       2247777888878999999999998754 499999999 8899999965432       


Q ss_pred             -----------------------------------------------------------CCHHHHHHHHHHHHHHHHHHH
Q psy14425         66 -----------------------------------------------------------LKEAEARKLFRQIAETVRACH   86 (114)
Q Consensus        66 -----------------------------------------------------------~~~~~~~~~~~~~~~~l~~lh   86 (114)
                                                                                 +++..+..++.|++.|+.|||
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH  210 (359)
T 3vhe_A          131 KGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA  210 (359)
T ss_dssp             -----------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH
Confidence                                                                       888999999999999999999


Q ss_pred             HCCCccCCCCCCcEEEecCC
Q psy14425         87 AQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        87 ~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++++|+||||+||+++.++
T Consensus       211 ~~~ivH~Dikp~NIll~~~~  230 (359)
T 3vhe_A          211 SRKCIHRDLAARNILLSEKN  230 (359)
T ss_dssp             HTTCCCSCCSGGGEEECGGG
T ss_pred             HCCcccCCCChhhEEEcCCC
Confidence            99999999999999997554

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.89  E-value=4.3e-22  Score=125.99  Aligned_cols=104  Identities=30%  Similarity=0.472  Sum_probs=92.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ..+|+..+..+ +|||++++++++...+..+++||++ +++|.+++...+.++....
T Consensus        35 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  113 (276)
T 2h6d_A           35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA  113 (276)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHH
T ss_pred             CCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHH
Confidence            68899999985432         22467677776 9999999999999999999999999 7899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       114 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  148 (276)
T 2h6d_A          114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM  148 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC
Confidence            99999999999999999999999999999997654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.89  E-value=6.5e-22  Score=127.71  Aligned_cols=104  Identities=22%  Similarity=0.333  Sum_probs=86.9

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCC-------------------------------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDK-------------------------------   43 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-------------------------------   43 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||++++++|....                               
T Consensus        30 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (332)
T 3qd2_B           30 DDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAP  108 (332)
T ss_dssp             TCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC---------------------
T ss_pred             CCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCccccc
Confidence            68999999986432       22477778877 9999999999985432                               


Q ss_pred             --------------------------EEEEEecCC-CCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHCCCccC
Q psy14425         44 --------------------------LAYLVFPPC-SGDLHSYVRQRKR---LKEAEARKLFRQIAETVRACHAQGIVLR   93 (114)
Q Consensus        44 --------------------------~~~~v~e~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~l~~lh~~~i~h~   93 (114)
                                                ..+++||++ +++|.+++.....   .+...+..++.|++.|+.|||++|++||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  188 (332)
T 3qd2_B          109 SVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHR  188 (332)
T ss_dssp             -----------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             ccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeec
Confidence                                      389999999 8899999976543   5666788999999999999999999999


Q ss_pred             CCCCCcEEEecCC
Q psy14425         94 DLKLRKFVFCNAQ  106 (114)
Q Consensus        94 ~lk~~nil~~~~~  106 (114)
                      ||||+||+++.++
T Consensus       189 Dlkp~NIll~~~~  201 (332)
T 3qd2_B          189 DLKPSNIFFTMDD  201 (332)
T ss_dssp             CCCGGGEEECTTC
T ss_pred             CCCcccEEEeCCC
Confidence            9999999997654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=5.8e-22  Score=125.16  Aligned_cols=104  Identities=21%  Similarity=0.233  Sum_probs=91.2

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      +++.||+|.+....     ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++... +.++...+..+
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  111 (269)
T 4hcu_A           33 NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM  111 (269)
T ss_dssp             TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHH
T ss_pred             CCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHH
Confidence            46789999997543     23577778877 8999999999999999999999999 88999999653 45899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+|+||+||+++.++
T Consensus       112 ~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  143 (269)
T 4hcu_A          112 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQ  143 (269)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG
T ss_pred             HHHHHHHHHHHHhCCeecCCcchheEEEcCCC
Confidence            99999999999999999999999999996654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.88  E-value=3.5e-22  Score=129.57  Aligned_cols=104  Identities=20%  Similarity=0.280  Sum_probs=90.3

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +..||+|.+.....       .+|+..+.++ +||||+++++++..++..+++||++ +++|.+++... +.++...+..
T Consensus        77 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  155 (325)
T 3kul_A           77 DVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG  155 (325)
T ss_dssp             CEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHH
T ss_pred             CceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHH
Confidence            34599999975432       2467777777 9999999999999999999999999 88999999654 5799999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       156 i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  189 (325)
T 3kul_A          156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV  189 (325)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCC
Confidence            9999999999999999999999999999976553

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.88  E-value=2.8e-22  Score=128.79  Aligned_cols=104  Identities=19%  Similarity=0.299  Sum_probs=90.2

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC--------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR--------   65 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~--------   65 (114)
                      +++.||+|.+.....       .+|+..+.++ +||||+++++++...+..+++||++ +++|.+++.....        
T Consensus        52 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  130 (314)
T 2ivs_A           52 GYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS  130 (314)
T ss_dssp             SEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC--
T ss_pred             CcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccc
Confidence            357899999965432       2467777777 9999999999999999999999999 8999999975432        


Q ss_pred             ----------------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 ----------------LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ----------------~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                                      ++...+..++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~  187 (314)
T 2ivs_A          131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR  187 (314)
T ss_dssp             --------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             cccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCC
Confidence                            78999999999999999999999999999999999998765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.88  E-value=5.1e-22  Score=136.40  Aligned_cols=105  Identities=17%  Similarity=0.166  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----CCCC
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----KRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----~~~~   67 (114)
                      ||+.||+|.+.+..         ...|..++.++ +||||++++++|.+.+.++++|||+ +++|.+++...    ..++
T Consensus       209 tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~  287 (543)
T 3c4z_A          209 TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ  287 (543)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCC
T ss_pred             CCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhccccccc
Confidence            68999999996432         12367777777 9999999999999999999999999 89999998653    3599


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..+..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       288 e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~  327 (543)
T 3c4z_A          288 EPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN  327 (543)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCC
Confidence            9999999999999999999999999999999999977653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.88  E-value=5.5e-22  Score=125.98  Aligned_cols=105  Identities=16%  Similarity=0.263  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~   74 (114)
                      ++..||+|.+....     ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++.. ...++...+..+
T Consensus        47 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  125 (283)
T 3gen_A           47 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM  125 (283)
T ss_dssp             TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHH
T ss_pred             CCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHH
Confidence            45689999997553     22577777777 8999999999999999999999999 8999999965 456999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       126 ~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~  158 (283)
T 3gen_A          126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV  158 (283)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHCCccCCCCccceEEEcCCCC
Confidence            999999999999999999999999999977653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.88  E-value=1e-21  Score=125.12  Aligned_cols=102  Identities=25%  Similarity=0.436  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCCHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~~~   69 (114)
                      +|+.+|+|.+....       ..+|+..+.++ +||||+++++++.+.+..+++||++ +++|.+.+..    ...+++.
T Consensus        46 ~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  124 (285)
T 3is5_A           46 SGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG  124 (285)
T ss_dssp             TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHH
T ss_pred             CCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHH
Confidence            57899999986543       23577777777 9999999999999999999999999 8899988843    3679999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      .+..++.|++.|+.|||++|++|+||||+||++++
T Consensus       125 ~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~  159 (285)
T 3is5_A          125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD  159 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec
Confidence            99999999999999999999999999999999954

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=6.4e-22  Score=130.83  Aligned_cols=105  Identities=24%  Similarity=0.333  Sum_probs=88.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC--EEEEEecCCCCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK--LAYLVFPPCSGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+....        ...|+..+..+.+||||+++++++...+  .++++||++.++|.+++.. ..++....
T Consensus        33 ~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~  111 (388)
T 3oz6_A           33 TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA-NILEPVHK  111 (388)
T ss_dssp             TCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHH-TCCCHHHH
T ss_pred             CCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHc-CCCCHHHH
Confidence            68999999985432        1246777777856999999999997544  7999999998899998866 57999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       112 ~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~  147 (388)
T 3oz6_A          112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH  147 (388)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCC
Confidence            999999999999999999999999999999977653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.88  E-value=6.5e-23  Score=132.07  Aligned_cols=105  Identities=16%  Similarity=0.260  Sum_probs=88.7

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhCCCCCcceEEEEEEcCC----EEEEEecCC-CCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLDSHPHINSLHEVLLGDK----LAYLVFPPC-SGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~~h~~i~~~~~~~~~~~----~~~~v~e~~-~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+......         +|+..+.++ +||||+++++++....    ..+++||++ +++|.+++...+.++
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~  114 (311)
T 3ork_A           36 DHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT  114 (311)
T ss_dssp             TTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCC
T ss_pred             CCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCC
Confidence            6789999999754321         344455555 9999999999987543    459999999 889999998778899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..+..++.|++.|+.|+|+++++|+||||+||+++.++.
T Consensus       115 ~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  154 (311)
T 3ork_A          115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA  154 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCC
Confidence            9999999999999999999999999999999999976653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.88  E-value=6e-22  Score=130.85  Aligned_cols=105  Identities=17%  Similarity=0.263  Sum_probs=91.1

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----------
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----------   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----------   64 (114)
                      +..||+|.+......       +|+..+.++.+||||+++++++...+..+++||++ +++|.+++....          
T Consensus       101 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  180 (382)
T 3tt0_A          101 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP  180 (382)
T ss_dssp             EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCC
T ss_pred             ceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhccccccccccc
Confidence            357999999754322       46777777779999999999999999999999999 889999997643          


Q ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 ------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                            .+++..+..++.|++.|+.|||+++++||||||+||+++.++.
T Consensus       181 ~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  229 (382)
T 3tt0_A          181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV  229 (382)
T ss_dssp             CSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCc
Confidence                  4899999999999999999999999999999999999976553

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.88  E-value=1.2e-21  Score=125.93  Aligned_cols=105  Identities=26%  Similarity=0.342  Sum_probs=87.3

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhh--CCCCCcceEEEEEEcCC-----EEEEEecCCCCCHHHHHHhC
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRL--DSHPHINSLHEVLLGDK-----LAYLVFPPCSGDLHSYVRQR   63 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~--~~h~~i~~~~~~~~~~~-----~~~~v~e~~~~~l~~~~~~~   63 (114)
                      +|+.||+|.+....           ..+|+..+..+  .+||||+++++++....     .++++||+++++|.+++...
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~  112 (308)
T 3g33_A           33 SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA  112 (308)
T ss_dssp             TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTC
T ss_pred             CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhc
Confidence            68899999986322           22455555444  26999999999998654     58999999988999999765


Q ss_pred             CC--CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 KR--LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ~~--~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..  +++..+..++.|++.|+.|||+++++||||||+||+++.++
T Consensus       113 ~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  157 (308)
T 3g33_A          113 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  157 (308)
T ss_dssp             CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            43  99999999999999999999999999999999999997655

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.88  E-value=4.2e-22  Score=126.38  Aligned_cols=105  Identities=16%  Similarity=0.348  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+....         ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+.+.....++....
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~  111 (279)
T 3fdn_A           33 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT  111 (279)
T ss_dssp             TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHH
T ss_pred             CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHH
Confidence            57789999985432         22356666666 8999999999999999999999999 7899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++|+||+|+||+++.++.
T Consensus       112 ~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~  147 (279)
T 3fdn_A          112 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE  147 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCC
Confidence            999999999999999999999999999999976553

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.88  E-value=4.2e-22  Score=131.40  Aligned_cols=105  Identities=22%  Similarity=0.262  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      ++..||+|.++...       ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++... ..+++....
T Consensus        72 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~  150 (373)
T 2qol_A           72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV  150 (373)
T ss_dssp             CBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHH
T ss_pred             CceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHH
Confidence            35679999986543       22467777777 9999999999999999999999999 89999999764 369999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       151 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  185 (373)
T 2qol_A          151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV  185 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCC
Confidence            99999999999999999999999999999977653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=4.6e-22  Score=125.49  Aligned_cols=105  Identities=18%  Similarity=0.230  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      ++..||+|.+....     ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++... ..+++..+..+
T Consensus        31 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  109 (268)
T 3sxs_A           31 GQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM  109 (268)
T ss_dssp             TTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHH
T ss_pred             CceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHH
Confidence            45689999997543     23577778877 8999999999999999999999999 88999999764 45999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|+|++|++|+||||+||+++.++.
T Consensus       110 ~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~  142 (268)
T 3sxs_A          110 CYDVCEGMAFLESHQFIHRDLAARNCLVDRDLC  142 (268)
T ss_dssp             HHHHHHHHHHHHHTTEEESSCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHCCeecCCcCcceEEECCCCC
Confidence            999999999999999999999999999977653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.88  E-value=6e-22  Score=125.52  Aligned_cols=104  Identities=30%  Similarity=0.570  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~   70 (114)
                      +|+.||+|.+....         ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++... ..++...
T Consensus        35 ~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  113 (278)
T 3cok_A           35 TGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE  113 (278)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHH
T ss_pred             CCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHH
Confidence            68899999985432         22467777777 9999999999999999999999999 88999998764 5699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       114 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~  149 (278)
T 3cok_A          114 ARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM  149 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999997654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=5.8e-22  Score=130.79  Aligned_cols=102  Identities=23%  Similarity=0.317  Sum_probs=89.9

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +|+.||+|.+....      ..+|+..+.++ +||||+++++++...+..+++|||+ +++|.+.+... ..+++.....
T Consensus       113 ~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~  191 (373)
T 2x4f_A          113 TGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL  191 (373)
T ss_dssp             TCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHH
T ss_pred             CCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHH
Confidence            68899999997643      23477777777 9999999999999999999999999 88998888653 4699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|++.|+.|||+++++||||||+||++.+
T Consensus       192 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  222 (373)
T 2x4f_A          192 FMKQICEGIRHMHQMYILHLDLKPENILCVN  222 (373)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEEEE
T ss_pred             HHHHHHHHHHHHHHCCcccccCCHHHEEEec
Confidence            9999999999999999999999999999953

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.88  E-value=7.8e-22  Score=124.94  Aligned_cols=100  Identities=25%  Similarity=0.445  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      ++..+|+|.+....      ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+.+.....+++..+..+
T Consensus        33 ~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i  111 (277)
T 3f3z_A           33 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI  111 (277)
T ss_dssp             TCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHH
T ss_pred             CCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHH
Confidence            57789999986532      23477777777 9999999999999999999999999 8899999887778999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEE
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVF  102 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~  102 (114)
                      +.|++.|+.|+|++|++|+|++|+||++
T Consensus       112 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~  139 (277)
T 3f3z_A          112 MKDVLSAVAYCHKLNVAHRDLKPENFLF  139 (277)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             HHHHHHHHHHHHHCCccCCCCCHHHEEE
Confidence            9999999999999999999999999999

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.88  E-value=8.4e-22  Score=128.10  Aligned_cols=104  Identities=26%  Similarity=0.398  Sum_probs=91.9

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.+|+|.+....         ...|+..+..+ +||||+++++++...+..+++||++ +++|.+++.....+++...
T Consensus        65 ~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~  143 (335)
T 2owb_A           65 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA  143 (335)
T ss_dssp             TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHH
T ss_pred             CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHH
Confidence            57899999986542         22366666766 9999999999999999999999999 7899999887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++|+||+|+||+++.++
T Consensus       144 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  178 (335)
T 2owb_A          144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL  178 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC
Confidence            99999999999999999999999999999997664

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.88  E-value=1.2e-21  Score=128.26  Aligned_cols=105  Identities=20%  Similarity=0.295  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHH-hCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVR-QRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~-~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ..+|+..+.++ +||||+++++++..++..+++||++.|++.+.+. ....+++..+
T Consensus        78 ~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~  156 (348)
T 1u5q_A           78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI  156 (348)
T ss_dssp             TTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHH
T ss_pred             CCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCCCCHHHHHHHhcCCCCHHHH
Confidence            68899999986432         22467777777 9999999999999999999999999888888875 3567999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       157 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  192 (348)
T 1u5q_A          157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL  192 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC
Confidence            999999999999999999999999999999987653

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.88  E-value=4e-22  Score=129.11  Aligned_cols=105  Identities=23%  Similarity=0.330  Sum_probs=91.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++...+..+++||++.+++.+++... ..++...+..
T Consensus        26 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  104 (324)
T 3mtl_A           26 TDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL  104 (324)
T ss_dssp             TCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHH
T ss_pred             CCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccccCHHHHHHhcCCCCCHHHHHH
Confidence            68899999986432       22478888877 999999999999999999999999988999988764 4589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       105 ~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~  138 (324)
T 3mtl_A          105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE  138 (324)
T ss_dssp             HHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCC
Confidence            9999999999999999999999999999976653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.88  E-value=8.5e-22  Score=126.01  Aligned_cols=104  Identities=19%  Similarity=0.234  Sum_probs=88.6

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHh-CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQ-RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~   70 (114)
                      +|+.||+|.+....       ..+|+..+.++ +|||++++++++...  +.++++||++ +++|.+++.. ...++...
T Consensus        49 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  127 (302)
T 4e5w_A           49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ  127 (302)
T ss_dssp             CSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHH
T ss_pred             cCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHH
Confidence            68899999986442       23477777777 999999999999876  6799999999 8899999954 45699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       128 ~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  163 (302)
T 4e5w_A          128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH  163 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC
Confidence            999999999999999999999999999999997665

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.88  E-value=5e-22  Score=128.10  Aligned_cols=104  Identities=19%  Similarity=0.198  Sum_probs=91.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC---CCHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR---LKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~---~~~~   69 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++...+.   +++.
T Consensus        59 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  137 (309)
T 3p86_A           59 HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER  137 (309)
T ss_dssp             TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHH
T ss_pred             CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHH
Confidence            47889999986543        22467777777 9999999999999999999999999 8899999976543   9999


Q ss_pred             HHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|||++|  ++||||||+||+++.++
T Consensus       138 ~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~  176 (309)
T 3p86_A          138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY  176 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC
Confidence            99999999999999999999  99999999999997764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.88  E-value=6.6e-22  Score=129.42  Aligned_cols=103  Identities=10%  Similarity=0.135  Sum_probs=89.1

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhC----CCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC--CCCHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLD----SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK--RLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~----~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~--~~~~~~   70 (114)
                      +|+.||+|.+....     ...|...+..+.    +||||+++++++...+..+++||+++++|.+++....  .++...
T Consensus        59 ~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~  138 (360)
T 3llt_A           59 NKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIED  138 (360)
T ss_dssp             TCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHH
T ss_pred             CCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHH
Confidence            68899999996432     223666666652    4999999999999999999999999999999997643  599999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +..++.|++.|+.|||++|++||||||+|||++.
T Consensus       139 ~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  172 (360)
T 3llt_A          139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLDD  172 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcc
Confidence            9999999999999999999999999999999964

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.88  E-value=2.9e-22  Score=128.19  Aligned_cols=87  Identities=26%  Similarity=0.390  Sum_probs=77.0

Q ss_pred             hHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Q psy14425         18 NLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD   94 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~   94 (114)
                      +|+..+.++ +||||+++++++..  .+.++++||++ +++|.++. ....+++..+..++.|++.|+.|+|++|++|+|
T Consensus        85 ~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  162 (298)
T 2zv2_A           85 QEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRD  162 (298)
T ss_dssp             HHHHHHHTC-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHHHhC-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            477777777 99999999999986  67899999999 78887764 335799999999999999999999999999999


Q ss_pred             CCCCcEEEecCC
Q psy14425         95 LKLRKFVFCNAQ  106 (114)
Q Consensus        95 lk~~nil~~~~~  106 (114)
                      |||+||+++.++
T Consensus       163 lkp~Nil~~~~~  174 (298)
T 2zv2_A          163 IKPSNLLVGEDG  174 (298)
T ss_dssp             CCGGGEEECTTS
T ss_pred             CCHHHEEECCCC
Confidence            999999997654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.88  E-value=1.1e-21  Score=125.20  Aligned_cols=104  Identities=26%  Similarity=0.398  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.+|+|.+....         ...|+..+..+ +||||+++++++...+..+++||++ +++|.+++...+.++....
T Consensus        39 ~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  117 (294)
T 2rku_A           39 TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA  117 (294)
T ss_dssp             TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHH
T ss_pred             CCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHH
Confidence            57899999986542         12366667767 9999999999999999999999999 7899999887778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       118 ~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (294)
T 2rku_A          118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL  152 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC
Confidence            99999999999999999999999999999997664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=5.9e-22  Score=128.87  Aligned_cols=106  Identities=25%  Similarity=0.319  Sum_probs=90.1

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      +++.||+|.+....       ..+|+..+.++.+||||+++++++...+..+++||++ +++|.+++....         
T Consensus        74 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  153 (344)
T 1rjb_A           74 VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIE  153 (344)
T ss_dssp             CEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC------
T ss_pred             cceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccc
Confidence            35679999986432       2247777887778999999999999999999999999 889999996542         


Q ss_pred             --------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 --------------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 --------------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                                    .+++..+..++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       154 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~  210 (344)
T 1rjb_A          154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV  210 (344)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTE
T ss_pred             hhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCc
Confidence                          2788999999999999999999999999999999999987653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.88  E-value=9.8e-22  Score=126.53  Aligned_cols=105  Identities=25%  Similarity=0.311  Sum_probs=92.5

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....         ..+|+..+.++ +||||+++++++..++..++++|++ +++|.+++...+.++....
T Consensus        58 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  136 (309)
T 2h34_A           58 RERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRA  136 (309)
T ss_dssp             TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHH
T ss_pred             CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHH
Confidence            57899999986542         22366667777 9999999999999999999999999 7899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++|+||+|+||+++.++.
T Consensus       137 ~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~  172 (309)
T 2h34_A          137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF  172 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCC
Confidence            999999999999999999999999999999976553

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.88  E-value=8e-22  Score=126.59  Aligned_cols=106  Identities=19%  Similarity=0.270  Sum_probs=91.9

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      +++.||+|.+.....       .+|+..+.++.+||||+++++++..++..+++||++ +++|.+++....         
T Consensus        52 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  131 (313)
T 1t46_A           52 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS  131 (313)
T ss_dssp             CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC------
T ss_pred             hhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccc
Confidence            467899999975432       246777777779999999999999999999999999 889999997543         


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 ---------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ---------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                               .+++.....++.|++.|+.|+|++|++|+||||+||+++.++.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  183 (313)
T 1t46_A          132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI  183 (313)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTE
T ss_pred             ccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCC
Confidence                     3899999999999999999999999999999999999987654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.88  E-value=4.5e-22  Score=127.10  Aligned_cols=104  Identities=19%  Similarity=0.273  Sum_probs=89.8

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCC-CCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~   71 (114)
                      +|+.||+|.+.....      .+|+..+.++ +||||+++++++..  ...++++||++ +++|.+++.... .++...+
T Consensus        38 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  116 (295)
T 3ugc_A           38 TGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL  116 (295)
T ss_dssp             CCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHH
T ss_pred             CCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHH
Confidence            688999999875432      2477777777 99999999999864  35689999999 889999997644 4999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+++++|+||||+||+++.++
T Consensus       117 ~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~  151 (295)
T 3ugc_A          117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN  151 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCC
Confidence            99999999999999999999999999999997665

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.88  E-value=5.6e-22  Score=133.05  Aligned_cols=103  Identities=20%  Similarity=0.288  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc---chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC-CCCHHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA---SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-RLKEAEARKLFRQ   77 (114)
Q Consensus         2 t~~~~avK~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~   77 (114)
                      +|+.||||.+..+.   ...|+..+..+.+||||+++++++.+.+..+++||+++++|.+++.... ..+......++.|
T Consensus        47 ~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~q  126 (432)
T 3p23_A           47 DNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ  126 (432)
T ss_dssp             SSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHH
T ss_pred             CCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHH
Confidence            68899999996543   4468888888778999999999999999999999999889999997543 3555566789999


Q ss_pred             HHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         78 IAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        78 ~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|+.|||++|++||||||+||+++.
T Consensus       127 i~~aL~~LH~~~ivHrDlKp~NIll~~  153 (432)
T 3p23_A          127 TTSGLAHLHSLNIVHRDLKPHNILISM  153 (432)
T ss_dssp             HHHHHHHHHHTTCCCCCCSTTSEEECC
T ss_pred             HHHHHHHHHHCcCEeCCCCHHHEEEec
Confidence            999999999999999999999999953

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.88  E-value=6e-22  Score=138.19  Aligned_cols=103  Identities=20%  Similarity=0.276  Sum_probs=90.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||||.++...        ..+|+.++.++ +||||+++++++.. +..+++||++ +++|.+++.....+++..+.
T Consensus       395 ~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~  472 (635)
T 4fl3_A          395 VVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNII  472 (635)
T ss_dssp             CEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHH
T ss_pred             cceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHH
Confidence            45789999996532        22467778877 99999999999975 4578999999 89999999887889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||++|++||||||+|||++.++
T Consensus       473 ~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~  506 (635)
T 4fl3_A          473 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH  506 (635)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC
Confidence            9999999999999999999999999999997765

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=7.9e-22  Score=130.26  Aligned_cols=102  Identities=18%  Similarity=0.233  Sum_probs=87.5

Q ss_pred             CCcEEEEEEeccc--cchhHHHHHhhhCCCCCcceEEEEEEc--------------------------------------
Q psy14425          2 AGIVVVLEIMSRE--ASGNLLSAHYRLDSHPHINSLHEVLLG--------------------------------------   41 (114)
Q Consensus         2 t~~~~avK~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~--------------------------------------   41 (114)
                      ||+.||+|.+..+  ...+|+.++..+ +||||++++++|..                                      
T Consensus        31 ~~~~vAiK~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (383)
T 3eb0_A           31 SGKRFALKKVLQDPRYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQ  109 (383)
T ss_dssp             TCCEEEEEEEECCTTSCCHHHHHHTTC-CCTTBCCEEEEEEEC-------------------------------------
T ss_pred             CCCEEEEEEEecCcchHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCC
Confidence            6899999998654  344688888888 99999999999843                                      


Q ss_pred             CCEEEEEecCCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         42 DKLAYLVFPPCSGDLHSYVR----QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        42 ~~~~~~v~e~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ...++++||++.++|.+.+.    ....+++..+..++.|++.|+.|||++|++||||||+||+++.
T Consensus       110 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~  176 (383)
T 3eb0_A          110 NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS  176 (383)
T ss_dssp             CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET
T ss_pred             ceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC
Confidence            34589999999878777664    3467999999999999999999999999999999999999974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.88  E-value=7.8e-22  Score=127.34  Aligned_cols=100  Identities=18%  Similarity=0.287  Sum_probs=86.9

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCC--EEEEEecCC-CCCHHHHHHhCC---CCCH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDK--LAYLVFPPC-SGDLHSYVRQRK---RLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~-~~~l~~~~~~~~---~~~~   68 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++...+  ..+++||++ +++|.+++....   .+++
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  111 (319)
T 4euu_A           33 TGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE  111 (319)
T ss_dssp             TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCH
T ss_pred             CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCH
Confidence            68999999986533       22467777777 8999999999998654  789999999 899999996533   3999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVF  102 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~  102 (114)
                      ..+..++.|++.|+.|||++|++|+||||+||++
T Consensus       112 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll  145 (319)
T 4euu_A          112 SEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR  145 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE
Confidence            9999999999999999999999999999999998

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.88  E-value=6e-22  Score=125.95  Aligned_cols=104  Identities=17%  Similarity=0.383  Sum_probs=91.8

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +++.||+|.+....         ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++...+.++....
T Consensus        38 ~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  116 (284)
T 2vgo_A           38 NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS  116 (284)
T ss_dssp             TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHH
T ss_pred             CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHH
Confidence            57889999985432         22467777777 9999999999999999999999999 7899999987778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       117 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  151 (284)
T 2vgo_A          117 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKG  151 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC
Confidence            99999999999999999999999999999997654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.88  E-value=1.1e-21  Score=128.48  Aligned_cols=105  Identities=15%  Similarity=0.196  Sum_probs=92.3

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.||+|.+.....       .+|+..+.++ +||||+++++++..++..+++||++ +++|.+++...+.++...+..
T Consensus        57 ~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  135 (360)
T 3eqc_A           57 SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK  135 (360)
T ss_dssp             TCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHH
T ss_pred             CCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHH
Confidence            688999999875432       2356666666 9999999999999999999999999 889999998777899999999


Q ss_pred             HHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||++ |++|+||||+||+++.++.
T Consensus       136 i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~  170 (360)
T 3eqc_A          136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE  170 (360)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCC
Confidence            999999999999996 9999999999999976653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.88  E-value=1.4e-21  Score=126.79  Aligned_cols=104  Identities=22%  Similarity=0.269  Sum_probs=90.0

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+.....        .+|+..+.++ +||||+++++++...+..+++||++ ++++..+......++...+.
T Consensus        49 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~  127 (331)
T 4aaa_A           49 TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ  127 (331)
T ss_dssp             TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHH
T ss_pred             CCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHH
Confidence            588999999854432        2467777777 8999999999999999999999999 66777766666779999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       128 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~  161 (331)
T 4aaa_A          128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG  161 (331)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC
Confidence            9999999999999999999999999999997655

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.88  E-value=7.6e-22  Score=124.78  Aligned_cols=105  Identities=19%  Similarity=0.329  Sum_probs=91.9

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+..+ +|||++++++++..++..+++||++ +++|.+++.....++......
T Consensus        31 ~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  109 (276)
T 2yex_A           31 TEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR  109 (276)
T ss_dssp             TCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHH
T ss_pred             CCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHH
Confidence            68899999986443       22466666666 9999999999999999999999999 789999987767799999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|++|++|+|++|+||+++.++.
T Consensus       110 ~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~  143 (276)
T 2yex_A          110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN  143 (276)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHhCCeeccCCChHHEEEccCCC
Confidence            9999999999999999999999999999977543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.88  E-value=1.4e-21  Score=126.94  Aligned_cols=106  Identities=18%  Similarity=0.278  Sum_probs=90.1

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      +++.||+|.+.....       .+|+..+.++.+||||+++++++...+..+++||++ +++|.+++....         
T Consensus        66 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  145 (334)
T 2pvf_A           66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD  145 (334)
T ss_dssp             --CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC-
T ss_pred             cceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhcccccccccc
Confidence            467899999975432       246677777778999999999999999999999999 889999997543         


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 -------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 -------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                             .++...+..++.|++.|+.|+|++|++|+||||+||+++.++.
T Consensus       146 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  195 (334)
T 2pvf_A          146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV  195 (334)
T ss_dssp             -------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCC
Confidence                   3889999999999999999999999999999999999976553

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.88  E-value=6.1e-22  Score=134.73  Aligned_cols=104  Identities=14%  Similarity=0.230  Sum_probs=91.2

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      +++.||+|.+..+.     ..+|+..+.++ +||||+++++++...+.++++||++ +++|.+++...  ..++......
T Consensus       244 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~  322 (495)
T 1opk_A          244 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY  322 (495)
T ss_dssp             GTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHH
T ss_pred             CCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHH
Confidence            47889999997543     22477778877 9999999999999999999999999 89999999763  3589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||+++++||||||+|||++.++
T Consensus       323 i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~  355 (495)
T 1opk_A          323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENH  355 (495)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             HHHHHHHHHHHHHhCCcccCCCChhhEEECCCC
Confidence            999999999999999999999999999996654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.88  E-value=2.5e-21  Score=125.08  Aligned_cols=103  Identities=23%  Similarity=0.264  Sum_probs=90.4

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++..  ...++++||++ +++|.+++.. ..++...+
T Consensus        59 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~  136 (318)
T 3lxp_A           59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQL  136 (318)
T ss_dssp             CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG-SCCCHHHH
T ss_pred             CCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh-CCCCHHHH
Confidence            67899999997653       23477777777 89999999999987  47899999999 8899999866 45999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       137 ~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~  171 (318)
T 3lxp_A          137 LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR  171 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCC
Confidence            99999999999999999999999999999997765

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.88  E-value=1.2e-21  Score=131.96  Aligned_cols=104  Identities=24%  Similarity=0.298  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCC-EEEEEecCC-CCCHHHHHHhCCC--CCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDK-LAYLVFPPC-SGDLHSYVRQRKR--LKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~v~e~~-~~~l~~~~~~~~~--~~~~~~~~   73 (114)
                      +|+.||||.++.+.    ..+|+..+.++ +||||+++++++...+ ..+++||++ +++|.+++...+.  ++......
T Consensus       215 ~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  293 (450)
T 1k9a_A          215 RGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK  293 (450)
T ss_dssp             TTEEEEEEEESSCTTSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHH
T ss_pred             cCCeEEEEEeCCchHHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHH
Confidence            36789999997653    23577778877 9999999999987654 799999999 8899999976443  79999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||+++++||||||+|||++.++
T Consensus       294 ~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~  326 (450)
T 1k9a_A          294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN  326 (450)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC
Confidence            999999999999999999999999999997655

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.88  E-value=6.7e-22  Score=132.64  Aligned_cols=104  Identities=23%  Similarity=0.295  Sum_probs=86.0

Q ss_pred             CCcEEEEEEecccc---chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCC-------HHHH
Q psy14425          2 AGIVVVLEIMSREA---SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLK-------EAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~-------~~~~   71 (114)
                      +|+.||||.+..+.   ...|+..+.++.+||||+++++++.+++.++++||+++++|.+++.......       ...+
T Consensus        38 ~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~  117 (434)
T 2rio_A           38 QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP  117 (434)
T ss_dssp             SSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHTC------------CCH
T ss_pred             CCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhH
Confidence            68999999986553   2357777877769999999999999999999999999889999997643322       2234


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      ..++.|++.|+.|||++|++||||||+||+++..
T Consensus       118 ~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~  151 (434)
T 2rio_A          118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS  151 (434)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECC
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEecC
Confidence            6799999999999999999999999999999764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.88  E-value=2.5e-21  Score=122.75  Aligned_cols=104  Identities=23%  Similarity=0.397  Sum_probs=90.4

Q ss_pred             CCcEEEEEEeccc--cchhHHHHHhhhCCCCCcceEEEEEEc----------------CCEEEEEecCC-CCCHHHHHHh
Q psy14425          2 AGIVVVLEIMSRE--ASGNLLSAHYRLDSHPHINSLHEVLLG----------------DKLAYLVFPPC-SGDLHSYVRQ   62 (114)
Q Consensus         2 t~~~~avK~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~----------------~~~~~~v~e~~-~~~l~~~~~~   62 (114)
                      +|+.||+|.+...  ...+|+..+.++ +|||++++++++..                ...++++||++ +++|.+++..
T Consensus        35 ~~~~vavK~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  113 (284)
T 2a19_B           35 DGKTYVIKRVKYNNEKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK  113 (284)
T ss_dssp             TCCEEEEEEEECCSGGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHH
T ss_pred             CCeEEEEEEeccccHHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhh
Confidence            6899999998654  355688888888 99999999999864                45589999999 7799999965


Q ss_pred             C--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         63 R--KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        63 ~--~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .  ..+++.....++.|++.|+.|||++|++|+||+|+||+++.++
T Consensus       114 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  159 (284)
T 2a19_B          114 RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK  159 (284)
T ss_dssp             GGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC
Confidence            3  5699999999999999999999999999999999999997655

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.88  E-value=9.4e-22  Score=125.09  Aligned_cols=104  Identities=15%  Similarity=0.243  Sum_probs=91.4

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      +++.||+|.+..+..     .+|+..+.++ +|||++++++++...+..+++||++ +++|.+++...  ..++...+..
T Consensus        37 ~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~  115 (288)
T 3kfa_A           37 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY  115 (288)
T ss_dssp             GTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHH
T ss_pred             CCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHH
Confidence            478899999976542     2467777777 9999999999999999999999999 78999999764  3489999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       116 i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~  148 (288)
T 3kfa_A          116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENH  148 (288)
T ss_dssp             HHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG
T ss_pred             HHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC
Confidence            999999999999999999999999999997654

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.87  E-value=2.2e-21  Score=123.92  Aligned_cols=104  Identities=23%  Similarity=0.367  Sum_probs=89.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC--CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~--~~~~~~~~   71 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++...+..+++||++.++|.+++...  ..++...+
T Consensus        27 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~  105 (299)
T 2r3i_A           27 TGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI  105 (299)
T ss_dssp             TCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHH
T ss_pred             CCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEcccCCHHHHHHhhhccCCCHHHH
Confidence            68899999985432        22467777777 999999999999999999999999988999998754  46899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       106 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~  140 (299)
T 2r3i_A          106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG  140 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCC
Confidence            99999999999999999999999999999997665

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.87  E-value=1.3e-21  Score=126.71  Aligned_cols=103  Identities=17%  Similarity=0.217  Sum_probs=88.6

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-------CCC
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-------KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-------~~~   66 (114)
                      +++.||+|.+.....       ..|+..+.++ +||||+++++++...+..+++||++ +++|.+++...       ..+
T Consensus        59 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  137 (327)
T 2yfx_A           59 SPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSL  137 (327)
T ss_dssp             -CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSC
T ss_pred             ccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccc
Confidence            567899999864432       2366667777 9999999999999999999999999 88999999764       238


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      +...+..++.|++.|+.|||++|++|+||+|+||+++..
T Consensus       138 ~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~  176 (327)
T 2yfx_A          138 AMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP  176 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS
T ss_pred             cHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecC
Confidence            899999999999999999999999999999999999744

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.87  E-value=1.1e-21  Score=127.17  Aligned_cols=103  Identities=21%  Similarity=0.280  Sum_probs=90.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~   70 (114)
                      +|+.||+|.+....        ...|+..+..+..|||++++++++...+..+++||++ +++|.+++...  ..+++..
T Consensus        53 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  132 (327)
T 3lm5_A           53 TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND  132 (327)
T ss_dssp             TCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHH
T ss_pred             CCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHH
Confidence            68999999986532        2246777777767899999999999999999999999 88999988543  5699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +..++.|++.|+.|||++|++||||||+||+++.
T Consensus       133 ~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~  166 (327)
T 3lm5_A          133 VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSS  166 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESC
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCcCChHHEEEec
Confidence            9999999999999999999999999999999976

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.87  E-value=2.9e-21  Score=123.00  Aligned_cols=104  Identities=23%  Similarity=0.364  Sum_probs=91.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++...+..++++|++ +++|.+.+.....++...+.
T Consensus        46 ~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  124 (287)
T 2wei_A           46 TQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA  124 (287)
T ss_dssp             TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHH
T ss_pred             CCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHH
Confidence            68899999985432        22467777777 9999999999999999999999999 88999988776789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|||++|++|+||+|+||+++..+
T Consensus       125 ~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~  158 (287)
T 2wei_A          125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKE  158 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC
Confidence            9999999999999999999999999999996543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.87  E-value=8.6e-24  Score=137.39  Aligned_cols=104  Identities=16%  Similarity=0.153  Sum_probs=82.6

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhC--------CCCCcceEEEEEE-------------------
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLD--------SHPHINSLHEVLL-------------------   40 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~--------~h~~i~~~~~~~~-------------------   40 (114)
                      +|+.||+|.+....              ..+|+.++..+.        +|||++++.+++.                   
T Consensus        42 ~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~  121 (336)
T 2vuw_A           42 DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNST  121 (336)
T ss_dssp             TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred             CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhh
Confidence            57899999996542              234666666652        4777777777643                   


Q ss_pred             -----------cCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HCCCccCCCCCCcEEEecCC
Q psy14425         41 -----------GDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH-AQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        41 -----------~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~~i~h~~lk~~nil~~~~~  106 (114)
                                 ..+.+++||||+ +|++.+.+.. ..+++..++.++.|++.|+.||| ++|++||||||+|||++.++
T Consensus       122 ~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~  199 (336)
T 2vuw_A          122 KGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTS  199 (336)
T ss_dssp             TCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECS
T ss_pred             ccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccC
Confidence                       267899999999 7766555533 56899999999999999999999 99999999999999998764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.87  E-value=4e-21  Score=123.53  Aligned_cols=104  Identities=17%  Similarity=0.299  Sum_probs=92.0

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHH-hCCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVR-QRKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~-~~~~~~~~~~~~~~   75 (114)
                      +|+.||+|.+....    ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++. ....++...+..++
T Consensus        53 ~~~~vaiK~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~  131 (314)
T 3com_A           53 TGQIVAIKQVPVESDLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL  131 (314)
T ss_dssp             TCCEEEEEEEETTSCCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHH
T ss_pred             CCCEEEEEecCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            58999999996543    23577777777 9999999999999999999999999 779999986 45679999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       132 ~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~  162 (314)
T 3com_A          132 QSTLKGLEYLHFMRKIHRDIKAGNILLNTEG  162 (314)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHhCCCcCCCcCHHHEEECCCC
Confidence            9999999999999999999999999997654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=2.7e-21  Score=121.72  Aligned_cols=104  Identities=20%  Similarity=0.203  Sum_probs=91.1

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      +++.||+|.+....     ..+|+..+.++ +|||++++++++..++..+++||++ +++|.+++... ..++......+
T Consensus        31 ~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  109 (267)
T 3t9t_A           31 NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM  109 (267)
T ss_dssp             TTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHH
T ss_pred             CCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHH
Confidence            46789999997553     23467777777 9999999999999999999999999 88999999764 46899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|+|++|++|+|++|+||+++.++
T Consensus       110 ~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~  141 (267)
T 3t9t_A          110 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQ  141 (267)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG
T ss_pred             HHHHHHHHHHHHhCCcccCCCchheEEECCCC
Confidence            99999999999999999999999999996654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.87  E-value=8.9e-22  Score=123.99  Aligned_cols=105  Identities=14%  Similarity=0.129  Sum_probs=89.3

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcC--CEEEEEecCC-CCCHHHHHHhCC--CCCH
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGD--KLAYLVFPPC-SGDLHSYVRQRK--RLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~--~~~~~v~e~~-~~~l~~~~~~~~--~~~~   68 (114)
                      +|+.+|+|.+.....        .+|+..+.++ +||||+++++++...  +..+++||++ +++|.+++....  .+++
T Consensus        32 ~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  110 (271)
T 3kmu_A           32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ  110 (271)
T ss_dssp             TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCH
T ss_pred             CCeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCH
Confidence            367899999875431        2355555666 899999999999877  7899999999 789999997654  4899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCCc
Q psy14425         69 AEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~~~~  107 (114)
                      .....++.|++.|+.|||+++  ++|+|+||+||+++.++.
T Consensus       111 ~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~  151 (271)
T 3kmu_A          111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT  151 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcc
Confidence            999999999999999999999  999999999999987653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.87  E-value=2.9e-21  Score=122.86  Aligned_cols=105  Identities=13%  Similarity=0.236  Sum_probs=86.1

Q ss_pred             CCcEEEEEEeccccchh-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh----CCCCCHHH
Q psy14425          2 AGIVVVLEIMSREASGN-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ----RKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~----~~~~~~~~   70 (114)
                      +|+.||+|.+.......       +.....+..+|||++++++++..++..+++||++.+++.+++..    ...+++..
T Consensus        31 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~  110 (290)
T 3fme_A           31 SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI  110 (290)
T ss_dssp             TTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHH
T ss_pred             CCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhccchHHHHHHHHhcCCCCCHHH
Confidence            68899999996553221       22233444599999999999999999999999997788777643    46799999


Q ss_pred             HHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         71 ARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      +..++.|++.|+.|+|++ |++|+||||+||+++.++
T Consensus       111 ~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~  147 (290)
T 3fme_A          111 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG  147 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC
Confidence            999999999999999998 999999999999997754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1e-21  Score=128.16  Aligned_cols=105  Identities=18%  Similarity=0.195  Sum_probs=89.3

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHH
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~   69 (114)
                      +|+.||+|.+....           ..+|+..+..+ +||||++++++|...+..+++||++.+++.+.+... ..+++.
T Consensus        34 ~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~  112 (346)
T 1ua2_A           34 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS  112 (346)
T ss_dssp             CCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSS
T ss_pred             CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEcCCCCHHHHHHhcCcCCCHH
Confidence            68899999986421           22477777777 999999999999999999999999977999888654 358899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       113 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~  150 (346)
T 1ua2_A          113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV  150 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCC
Confidence            99999999999999999999999999999999977653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.87  E-value=1.6e-21  Score=124.40  Aligned_cols=103  Identities=20%  Similarity=0.280  Sum_probs=88.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||+|.+....        ..+|+..+..+ +|||++++++++ ..+..+++||++ +++|.+++...+.++...+.
T Consensus        43 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  120 (291)
T 1xbb_A           43 VVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII  120 (291)
T ss_dssp             SEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHH
T ss_pred             ceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHH
Confidence            46789999986542        22467777777 999999999999 556788999999 78999999887789999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       121 ~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~  154 (291)
T 1xbb_A          121 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH  154 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC
Confidence            9999999999999999999999999999997765

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.87  E-value=3.1e-21  Score=124.23  Aligned_cols=104  Identities=24%  Similarity=0.309  Sum_probs=88.4

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEE----cCCEEEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLL----GDKLAYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~----~~~~~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      +|+.||+|.+....      ..+|+..+..+ +||||+++++++.    ..+..+++||++ +++|.+++..    ...+
T Consensus        53 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  131 (317)
T 2buj_A           53 DGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL  131 (317)
T ss_dssp             TCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCC
T ss_pred             CCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCC
Confidence            68899999885432      22467777777 9999999999987    345799999999 7899998864    4569


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++..+..++.|++.|+.|||+++++|+||+|+||+++.++
T Consensus       132 ~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~  171 (317)
T 2buj_A          132 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG  171 (317)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC
Confidence            9999999999999999999999999999999999997654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.87  E-value=5.2e-21  Score=123.14  Aligned_cols=109  Identities=21%  Similarity=0.336  Sum_probs=93.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCC-CCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDS-HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~-h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+....        ..+|+..+.++.. |||++++++++...+..+++||+.+++|.+++.....++.....
T Consensus        51 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~  130 (313)
T 3cek_A           51 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK  130 (313)
T ss_dssp             TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHH
T ss_pred             CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHH
Confidence            47889999986432        2246777777733 69999999999999999999996689999999887889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcccc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVG  110 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~  110 (114)
                      .++.|++.|+.|+|+++++|+||+|+||+++++..+++
T Consensus       131 ~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~  168 (313)
T 3cek_A          131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI  168 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEEC
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEe
Confidence            99999999999999999999999999999977555554

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=6e-22  Score=128.81  Aligned_cols=104  Identities=26%  Similarity=0.405  Sum_probs=87.1

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-------
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-------   62 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-------   62 (114)
                      +++.||+|.+....           ..+|+..+.++ +||||+++++++.+.+..+++||++ +++|.+++..       
T Consensus        50 ~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~  128 (345)
T 3hko_A           50 TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG  128 (345)
T ss_dssp             TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTT
T ss_pred             CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccc
Confidence            57889999985432           22477778877 9999999999999999999999999 8999998841       


Q ss_pred             ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         63 ---------------------------------RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        63 ---------------------------------~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                                                       ...+++..++.++.|++.|+.|||+++++|+||||+||+++.++
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~  205 (345)
T 3hko_A          129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK  205 (345)
T ss_dssp             EEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCC
Confidence                                             01135677888999999999999999999999999999997654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.87  E-value=2.5e-21  Score=126.00  Aligned_cols=104  Identities=20%  Similarity=0.417  Sum_probs=88.2

Q ss_pred             CCcEEEEEEecccc-chhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-SGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      +|+.||+|.+.... ...++....+..+|||++++++++..    ...++++||++ +++|.+++...+  .+++..++.
T Consensus        53 ~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~  132 (336)
T 3fhr_A           53 TGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE  132 (336)
T ss_dssp             TCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHH
T ss_pred             CCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHH
Confidence            68999999996543 23455555566699999999999975    55689999999 789999997653  599999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      ++.|++.|+.|||++|++|+||||+||+++..
T Consensus       133 i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~  164 (336)
T 3fhr_A          133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK  164 (336)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEESCS
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEEEec
Confidence            99999999999999999999999999999754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.87  E-value=3.8e-21  Score=125.51  Aligned_cols=104  Identities=20%  Similarity=0.282  Sum_probs=88.4

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc--------CCEEEEEecCCCCCHHHHHHhC-C
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG--------DKLAYLVFPPCSGDLHSYVRQR-K   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~--------~~~~~~v~e~~~~~l~~~~~~~-~   64 (114)
                      +|+.||+|.+....        ..+|+..+..+ +|||++++++++..        .+.++++||++.+++.+.+... .
T Consensus        41 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~  119 (351)
T 3mi9_A           41 TGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV  119 (351)
T ss_dssp             TCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTS
T ss_pred             CCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccC
Confidence            68899999985432        12477778777 99999999999976        4568999999987888877653 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++...+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       120 ~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~  161 (351)
T 3mi9_A          120 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG  161 (351)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC
Confidence            699999999999999999999999999999999999997654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.87  E-value=4.4e-21  Score=124.16  Aligned_cols=105  Identities=20%  Similarity=0.232  Sum_probs=90.8

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEE--cCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLL--GDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~--~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~   71 (114)
                      +|+.||+|.+....      ..+|+..+.++ +||||+++++++.  ..+..+++||++ +++|.+++.. ...+++..+
T Consensus        51 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  129 (327)
T 3lxl_A           51 TGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL  129 (327)
T ss_dssp             CSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHH
T ss_pred             cceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHH
Confidence            57899999996553      23477777777 9999999999987  456799999999 8999999975 356999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       130 ~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~  165 (327)
T 3lxl_A          130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAH  165 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCC
Confidence            999999999999999999999999999999976653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.87  E-value=4.4e-21  Score=122.70  Aligned_cols=104  Identities=18%  Similarity=0.296  Sum_probs=88.6

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +|+.+|+|.+....      ...|+..+.++ +|||++++++++...+..+++||++ +++|.+++.. ...++...+..
T Consensus        43 ~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~  121 (302)
T 2j7t_A           43 TGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV  121 (302)
T ss_dssp             TCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHH
T ss_pred             CCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHH
Confidence            58899999986443      22467777777 9999999999999999999999999 8899988864 46699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       122 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  154 (302)
T 2j7t_A          122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG  154 (302)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS
T ss_pred             HHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC
Confidence            999999999999999999999999999997654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.87  E-value=1.5e-21  Score=124.71  Aligned_cols=105  Identities=18%  Similarity=0.252  Sum_probs=84.6

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--------CCC
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--------RKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--------~~~   65 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++...+..+++||++ +++|.+++..        .+.
T Consensus        39 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  117 (303)
T 2vwi_A           39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV  117 (303)
T ss_dssp             --CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCS
T ss_pred             CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCC
Confidence            57899999886432       22355556666 8999999999999999999999999 8899998863        345


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++...+..++.|++.|+.|||++|++|+||+|+||+++.++.
T Consensus       118 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~  159 (303)
T 2vwi_A          118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS  159 (303)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCC
Confidence            899999999999999999999999999999999999976543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.87  E-value=7.4e-21  Score=122.85  Aligned_cols=105  Identities=17%  Similarity=0.340  Sum_probs=90.9

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCC-CCCHHHHHHhC--CCCC
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPC-SGDLHSYVRQR--KRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~-~~~l~~~~~~~--~~~~   67 (114)
                      +|+.||+|.+....     ...|+..+.++.+||||+++++++..      .+..+++||++ +++|.+++...  ..++
T Consensus        48 ~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  127 (326)
T 2x7f_A           48 TGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK  127 (326)
T ss_dssp             TCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCC
T ss_pred             CCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCC
Confidence            68899999986543     23567777777789999999999976      56899999999 77999999754  4699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++|+||+|+||+++.++
T Consensus       128 ~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~  166 (326)
T 2x7f_A          128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA  166 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC
Confidence            999999999999999999999999999999999997654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.87  E-value=1.4e-21  Score=126.32  Aligned_cols=104  Identities=18%  Similarity=0.238  Sum_probs=89.8

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----CCCHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----~~~~~   69 (114)
                      +|+.||+|.+....       ..+|+..+..+ +||||+++++++...+..+++||++ +++|.+++....    .+++.
T Consensus        53 ~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  131 (326)
T 3uim_A           53 DGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP  131 (326)
T ss_dssp             SSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHH
T ss_pred             CCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHH
Confidence            57889999986543       23467777766 8999999999999999999999999 889999997532    38999


Q ss_pred             HHHHHHHHHHHHHHHHHHC---CCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQ---GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~---~i~h~~lk~~nil~~~~~  106 (114)
                      ....++.|++.|+.|||++   |++|+||||+||+++.++
T Consensus       132 ~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~  171 (326)
T 3uim_A          132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF  171 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence            9999999999999999999   999999999999998764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.87  E-value=1.8e-21  Score=129.18  Aligned_cols=100  Identities=18%  Similarity=0.287  Sum_probs=86.8

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCC--EEEEEecCC-CCCHHHHHHhCC---CCCH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDK--LAYLVFPPC-SGDLHSYVRQRK---RLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~-~~~l~~~~~~~~---~~~~   68 (114)
                      +|+.||+|.+....       ..+|+..+.++ +||||+++++++...+  ..+++|||+ +++|.+++....   .+++
T Consensus        33 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~  111 (396)
T 4eut_A           33 TGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE  111 (396)
T ss_dssp             TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCH
T ss_pred             CCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCH
Confidence            68999999986533       22467777777 9999999999998654  789999999 889999986532   3999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEE
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVF  102 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~  102 (114)
                      ..+..++.|++.|+.|||++|++||||||+||++
T Consensus       112 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  145 (396)
T 4eut_A          112 SEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR  145 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEE
Confidence            9999999999999999999999999999999998

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.87  E-value=8.1e-21  Score=122.85  Aligned_cols=102  Identities=21%  Similarity=0.334  Sum_probs=89.8

Q ss_pred             CCcEEEEEEecccc---chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA---SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~   75 (114)
                      +|+.||+|.+....   ..+|+.++.++.+|||++++++++..  ....+++||++ +++|.+++..   ++...+..++
T Consensus        60 ~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~  136 (330)
T 3nsz_A           60 NNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYM  136 (330)
T ss_dssp             TCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHH
T ss_pred             CCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---CCHHHHHHHH
Confidence            68899999997543   34688888888569999999999987  67799999999 8899888743   8999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|||++|++||||||+||+++.++
T Consensus       137 ~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~  167 (330)
T 3nsz_A          137 YEILKALDYCHSMGIMHRDVKPHNVMIDHEH  167 (330)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             HHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC
Confidence            9999999999999999999999999998665

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.86  E-value=5.1e-21  Score=121.96  Aligned_cols=101  Identities=24%  Similarity=0.258  Sum_probs=88.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ++..||+|.+....        ..+|+..+.++ +||||+++++++..    ...++++||++ +++|.+++...+.++.
T Consensus        50 ~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  128 (290)
T 1t4h_A           50 TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI  128 (290)
T ss_dssp             TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCH
Confidence            57889999986442        22466677777 99999999999875    46799999999 8899999987788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEe
Q psy14425         69 AEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFC  103 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~  103 (114)
                      ..+..++.|++.|+.|||+++  ++|+||+|+||+++
T Consensus       129 ~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~  165 (290)
T 1t4h_A          129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT  165 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE
Confidence            999999999999999999999  99999999999997

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.86  E-value=1.2e-21  Score=126.56  Aligned_cols=105  Identities=18%  Similarity=0.189  Sum_probs=90.1

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC----CCCHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK----RLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~----~~~~~~   70 (114)
                      +|+.||+|.+.....      .+|+..+..+ +||||+++++++...+..+++||++ +++|.+++....    .+++..
T Consensus        62 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  140 (321)
T 2qkw_B           62 DGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ  140 (321)
T ss_dssp             TCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHH
T ss_pred             CCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHH
Confidence            578999999865432      2466666666 9999999999999999999999999 889999885432    489999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ...++.|++.|+.|+|++|++|+||||+||+++.++.
T Consensus       141 ~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~  177 (321)
T 2qkw_B          141 RLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV  177 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCC
T ss_pred             HHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCC
Confidence            9999999999999999999999999999999976643

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.86  E-value=2.4e-21  Score=129.46  Aligned_cols=104  Identities=17%  Similarity=0.236  Sum_probs=87.2

Q ss_pred             CCcEEEEEEecccc--chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCCCCCHHHHHH----hCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA--SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPCSGDLHSYVR----QRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~--~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~~~~l~~~~~----~~~~~~~~   69 (114)
                      +|+.||||.+..+.  ..+|+.++..+ +||||++++++|..      ...++++|||+.+++.+.+.    ....+++.
T Consensus        78 ~~~~vaiK~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~  156 (420)
T 1j1b_A           78 SGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI  156 (420)
T ss_dssp             TCCEEEEEEEECCTTSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHH
T ss_pred             CCcEEEEEEecccchhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHH
Confidence            68999999986542  44688888887 99999999999853      22477999999777777664    24669999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.++.|++.|+.|||++|++||||||+|||++.++
T Consensus       157 ~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~  193 (420)
T 1j1b_A          157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT  193 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC
Confidence            9999999999999999999999999999999998654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.5e-21  Score=128.53  Aligned_cols=103  Identities=26%  Similarity=0.340  Sum_probs=88.8

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      ||+.||+|.+....        ..+|+..+..+ +||||+++++++...      ..++++||+++++|.+++.. ..++
T Consensus        49 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~  126 (367)
T 1cm8_A           49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLG  126 (367)
T ss_dssp             TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHH-CCCC
T ss_pred             CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhc-CCCC
Confidence            68999999985432        12467777777 899999999999765      34699999999999999876 6799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       127 ~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  165 (367)
T 1cm8_A          127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC  165 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC
Confidence            999999999999999999999999999999999997764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.86  E-value=6.1e-21  Score=123.51  Aligned_cols=101  Identities=19%  Similarity=0.270  Sum_probs=87.4

Q ss_pred             EEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-------------
Q psy14425          6 VVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-------------   64 (114)
Q Consensus         6 ~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-------------   64 (114)
                      +|+|.+....       ...|+..+.++.+||||+++++++...+..+++||++ +++|.+++....             
T Consensus        55 v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  134 (327)
T 1fvr_A           55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  134 (327)
T ss_dssp             EEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTT
T ss_pred             eeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence            4889886432       2246777777768999999999999999999999999 889999997543             


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ---RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ---~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         .++...++.++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       135 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             BSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence               689999999999999999999999999999999999997654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.86  E-value=1.1e-20  Score=121.33  Aligned_cols=104  Identities=18%  Similarity=0.316  Sum_probs=90.3

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh----CCCCC
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ----RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~----~~~~~   67 (114)
                      +|+.||+|.+....         ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++..    ...++
T Consensus        56 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  134 (310)
T 2wqm_A           56 DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP  134 (310)
T ss_dssp             TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCC
T ss_pred             CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCC
Confidence            58899999986422         22467777777 9999999999999999999999999 7799998853    35689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...++.++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       135 ~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~  173 (310)
T 2wqm_A          135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG  173 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC
Confidence            999999999999999999999999999999999997654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=4.7e-21  Score=124.56  Aligned_cols=102  Identities=18%  Similarity=0.227  Sum_probs=89.0

Q ss_pred             cEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          4 IVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         4 ~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      ..||+|.+......       +|+..+.++ +||||+++++++...+..+++||++ +++|.+++... ..++...+..+
T Consensus        74 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  152 (333)
T 1mqb_A           74 VPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM  152 (333)
T ss_dssp             EEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHH
T ss_pred             ccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHH
Confidence            46999998754322       366667777 9999999999999999999999999 78999999764 56999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|||++|++|+||||+||+++.++
T Consensus       153 ~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  184 (333)
T 1mqb_A          153 LRGIAAGMKYLANMNYVHRDLAARNILVNSNL  184 (333)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChheEEECCCC
Confidence            99999999999999999999999999997654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.86  E-value=8e-21  Score=121.07  Aligned_cols=102  Identities=18%  Similarity=0.247  Sum_probs=88.7

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---CCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---RLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---~~~~~~~   71 (114)
                      +|+.||+|.+.....      .+|+..+..+ +||||+++++++...+..+++||++ +++|.+++....   .++...+
T Consensus        46 ~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  124 (295)
T 2clq_A           46 NQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI  124 (295)
T ss_dssp             TCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHH
T ss_pred             CCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHH
Confidence            578999999865432      2466677777 9999999999999999999999999 889999997542   4678889


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ..++.|++.|+.|+|++|++|+||+|+||+++.
T Consensus       125 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  157 (295)
T 2clq_A          125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT  157 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             HHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC
Confidence            999999999999999999999999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.86  E-value=2.6e-21  Score=126.98  Aligned_cols=101  Identities=15%  Similarity=0.157  Sum_probs=83.6

Q ss_pred             CcEEEEEEeccccc--hhHHHHHhh--------------hCCCCCcceEEEEEEcC----CEEEEEecCCCCCHHHHHHh
Q psy14425          3 GIVVVLEIMSREAS--GNLLSAHYR--------------LDSHPHINSLHEVLLGD----KLAYLVFPPCSGDLHSYVRQ   62 (114)
Q Consensus         3 ~~~~avK~~~~~~~--~~e~~~~~~--------------~~~h~~i~~~~~~~~~~----~~~~~v~e~~~~~l~~~~~~   62 (114)
                      ++.||+|.+.....  ..|+..+.+              ..+||||+++++++...    ...+++||+++++|.+++..
T Consensus        65 ~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~  144 (364)
T 3op5_A           65 DAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEA  144 (364)
T ss_dssp             TCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHH
T ss_pred             ccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHh
Confidence            67899999865542  223222221              23799999999998754    56899999998899999976


Q ss_pred             C-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         63 R-KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        63 ~-~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      . +.+++..+..++.|++.|+.|||+++++||||||+|||++
T Consensus       145 ~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~  186 (364)
T 3op5_A          145 NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN  186 (364)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEe
Confidence            5 5799999999999999999999999999999999999997

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.86  E-value=2.1e-21  Score=124.78  Aligned_cols=105  Identities=16%  Similarity=0.232  Sum_probs=89.0

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcC-CEEEEEecCC-CCCHHHHHHhCCC-------
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGD-KLAYLVFPPC-SGDLHSYVRQRKR-------   65 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~v~e~~-~~~l~~~~~~~~~-------   65 (114)
                      +++.||+|.+.....       .+|+..+.++.+||||+++++++... ..++++||++ +++|.+++.....       
T Consensus        56 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  135 (316)
T 2xir_A           56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV  135 (316)
T ss_dssp             CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC--
T ss_pred             cceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccc
Confidence            468899999975432       24677777776899999999998765 4599999999 7899999976443       


Q ss_pred             ---------CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 ---------LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ---------~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                               ++...+..++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~  185 (316)
T 2xir_A          136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  185 (316)
T ss_dssp             -----CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             cchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC
Confidence                     78999999999999999999999999999999999997544

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.86  E-value=7.5e-21  Score=122.20  Aligned_cols=103  Identities=21%  Similarity=0.240  Sum_probs=87.8

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEE--------------cCCEEEEEecCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLL--------------GDKLAYLVFPPCSGDLHSYVR   61 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~--------------~~~~~~~v~e~~~~~l~~~~~   61 (114)
                      +|+.||+|.+.....      .+|+..+.++ +|||++++++++.              ..+..+++||++.++|.+++.
T Consensus        35 ~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~  113 (320)
T 2i6l_A           35 CDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE  113 (320)
T ss_dssp             TTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHT
T ss_pred             CCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhh
Confidence            588999999865432      2467777777 9999999999884              346899999999889999885


Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      . +.++...+..++.|++.|+.|||++|++|+||||+||+++..+
T Consensus       114 ~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A          114 Q-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             T-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             c-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            4 6799999999999999999999999999999999999997543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.86  E-value=7.1e-21  Score=121.95  Aligned_cols=103  Identities=16%  Similarity=0.257  Sum_probs=90.5

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      +|+.||+|.+....       ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++.. +.++......
T Consensus        46 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~  123 (303)
T 3a7i_A           46 TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIAT  123 (303)
T ss_dssp             TCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHH
T ss_pred             CCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHH
Confidence            68899999986443       22467777777 9999999999999999999999999 7899998854 6799999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       124 ~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~  156 (303)
T 3a7i_A          124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHG  156 (303)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHCCCccCCCChheEEECCCC
Confidence            999999999999999999999999999997654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.86  E-value=3e-21  Score=130.53  Aligned_cols=102  Identities=24%  Similarity=0.262  Sum_probs=86.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+..+ +||||++++++|...      ..++++||++.+++.+.+..  .++
T Consensus        86 ~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~--~l~  162 (464)
T 3ttj_A           86 LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELD  162 (464)
T ss_dssp             TTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS--CCC
T ss_pred             CCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh--cCC
Confidence            68899999996532        22467777777 999999999999654      46899999997778777643  489


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++||||||+|||++.++
T Consensus       163 ~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~  201 (464)
T 3ttj_A          163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  201 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC
Confidence            999999999999999999999999999999999997664

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.86  E-value=2e-21  Score=125.73  Aligned_cols=103  Identities=15%  Similarity=0.154  Sum_probs=87.2

Q ss_pred             CCcEEEEEEeccccch-----hHHHHHhhhCCCCCcceEEEEEEcC----CEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASG-----NLLSAHYRLDSHPHINSLHEVLLGD----KLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-----~e~~~~~~~~~h~~i~~~~~~~~~~----~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+......     .|+..+.++ +||||+++++++...    ..++++||++ +++|.+++.. ..+++...
T Consensus        46 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~  123 (322)
T 3soc_A           46 LNEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNEL  123 (322)
T ss_dssp             TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHH
T ss_pred             CCCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHH
Confidence            3678999999655322     255556666 999999999999864    3489999999 8899999966 55999999


Q ss_pred             HHHHHHHHHHHHHHHHC----------CCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQ----------GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~----------~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||+.          +++||||||+||+++.++
T Consensus       124 ~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~  168 (322)
T 3soc_A          124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL  168 (322)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC
Confidence            99999999999999999          999999999999997764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.86  E-value=1.7e-21  Score=129.52  Aligned_cols=101  Identities=23%  Similarity=0.339  Sum_probs=86.5

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEE--cCCEEEEEecCCCCCHHHHHHhC---------CCC
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLL--GDKLAYLVFPPCSGDLHSYVRQR---------KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~--~~~~~~~v~e~~~~~l~~~~~~~---------~~~   66 (114)
                      +++.||+|.+....    ..+|+.++.++ +||||++++++|.  ....++++|||++++|.+++...         ..+
T Consensus        47 ~~~~vaiK~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l  125 (405)
T 3rgf_A           47 DDKDYALKQIEGTGISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL  125 (405)
T ss_dssp             CCCCEEEEECSSSSCCHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------C
T ss_pred             CCeEEEEEEECCCCCCHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCC
Confidence            57889999997553    33578888888 9999999999995  47789999999988898887521         248


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      ++..++.++.|++.|+.|||++|++||||||+|||+.
T Consensus       126 ~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~  162 (405)
T 3rgf_A          126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM  162 (405)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEe
Confidence            9999999999999999999999999999999999994

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.86  E-value=3.7e-21  Score=125.95  Aligned_cols=105  Identities=18%  Similarity=0.281  Sum_probs=88.2

Q ss_pred             CCcEEEEEEecccc-----------------chhHHHHHhhhCCCCCcceEEEEEE-----cCCEEEEEecCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA-----------------SGNLLSAHYRLDSHPHINSLHEVLL-----GDKLAYLVFPPCSGDLHSY   59 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------------~~~e~~~~~~~~~h~~i~~~~~~~~-----~~~~~~~v~e~~~~~l~~~   59 (114)
                      +|+.||+|.+....                 ..+|+..+.++ +||||+++++++.     ....++++||++.+++.+.
T Consensus        45 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~  123 (362)
T 3pg1_A           45 EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV  123 (362)
T ss_dssp             TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHH
T ss_pred             CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHH
Confidence            47899999985321                 23477778877 9999999999984     3347999999998889888


Q ss_pred             HHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         60 VRQR-KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        60 ~~~~-~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +... ..++...+..++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~  172 (362)
T 3pg1_A          124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND  172 (362)
T ss_dssp             HHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC
Confidence            8654 46999999999999999999999999999999999999976543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.86  E-value=5.8e-21  Score=121.29  Aligned_cols=102  Identities=21%  Similarity=0.335  Sum_probs=86.0

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~   73 (114)
                      +..+|+|.+.....       .+|+..+.++ +||||+++++++. .+..+++||++ +++|.+++.... .++......
T Consensus        43 ~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  120 (281)
T 1mp8_A           43 ALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL  120 (281)
T ss_dssp             CEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHH
T ss_pred             ceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHH
Confidence            45699999865322       2366667777 9999999999984 56788999999 789999997643 699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       121 ~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  153 (281)
T 1mp8_A          121 YAYQLSTALAYLESKRFVHRDIAARNVLVSSND  153 (281)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHhCCeecccccHHHEEECCCC
Confidence            999999999999999999999999999998654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.86  E-value=4.1e-21  Score=123.87  Aligned_cols=103  Identities=21%  Similarity=0.236  Sum_probs=88.6

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----------C
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----------K   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----------~   64 (114)
                      ++.||+|.+.....       .+|+..+.++ +||||+++++++...+..+++||++ +++|.+++...          .
T Consensus        55 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  133 (322)
T 1p4o_A           55 ETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA  133 (322)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCC
T ss_pred             ceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCC
Confidence            57899999865432       2466677777 9999999999999999999999999 78999998642          3


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++...+..++.|++.|+.|+|++|++|+||||+||+++.++
T Consensus       134 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~  175 (322)
T 1p4o_A          134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF  175 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC
Confidence            468999999999999999999999999999999999997764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.86  E-value=4.4e-21  Score=121.06  Aligned_cols=101  Identities=24%  Similarity=0.260  Sum_probs=84.0

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      +|+.+|+|.+....          ..+|+..+..+ +||||+++++++..++..+++||++ +++|.+++. ...+++..
T Consensus        29 ~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~  106 (271)
T 3dtc_A           29 IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDI  106 (271)
T ss_dssp             TTEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT-SSCCCHHH
T ss_pred             cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh-cCCCCHHH
Confidence            47889999985432          22366666667 9999999999999999999999999 889998884 46799999


Q ss_pred             HHHHHHHHHHHHHHHHHCC---CccCCCCCCcEEEec
Q psy14425         71 ARKLFRQIAETVRACHAQG---IVLRDLKLRKFVFCN  104 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~---i~h~~lk~~nil~~~  104 (114)
                      ...++.|++.|+.|+|+++   ++|+|+||+||+++.
T Consensus       107 ~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~  143 (271)
T 3dtc_A          107 LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ  143 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEec
Confidence            9999999999999999999   889999999999975

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.86  E-value=6.4e-21  Score=123.28  Aligned_cols=105  Identities=24%  Similarity=0.355  Sum_probs=88.7

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEE--------cCCEEEEEecCCCCCHHHHHHh---CC
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLL--------GDKLAYLVFPPCSGDLHSYVRQ---RK   64 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~--------~~~~~~~v~e~~~~~l~~~~~~---~~   64 (114)
                      +|+.||+|.+....      ..+|+..+.++.+||||+++++++.        ....++++||++.|+|.+++..   .+
T Consensus        52 ~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~  131 (337)
T 3ll6_A           52 SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG  131 (337)
T ss_dssp             TCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTC
T ss_pred             CCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccC
Confidence            68899999885443      2246777778856999999999994        3456899999998899988854   45


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~~~  106 (114)
                      .+++..+..++.|++.|+.|||+++  ++|+||||+||+++.++
T Consensus       132 ~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~  175 (337)
T 3ll6_A          132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG  175 (337)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC
Confidence            6999999999999999999999999  99999999999997754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.1e-21  Score=137.65  Aligned_cols=107  Identities=21%  Similarity=0.232  Sum_probs=86.3

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCE-----EEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKL-----AYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~-----~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +|+.||+|.+.....       ..|+..+.++ +||||+++++++...+.     .++||||+ +++|.+.+..  .+++
T Consensus       105 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~  181 (681)
T 2pzi_A          105 NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPV  181 (681)
T ss_dssp             TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCH
T ss_pred             CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCH
Confidence            578999999864432       2356666666 99999999999986554     79999999 8899887644  6999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccccc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGH  111 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~~  111 (114)
                      ..+..++.|++.|+.|+|++|++||||||+||+++.+..+++|
T Consensus       182 ~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~D  224 (681)
T 2pzi_A          182 AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLID  224 (681)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEe
Confidence            9999999999999999999999999999999999886555543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.86  E-value=8.1e-21  Score=121.80  Aligned_cols=104  Identities=14%  Similarity=0.110  Sum_probs=89.9

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh---CCCCC
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ---RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~---~~~~~   67 (114)
                      +++.+|+|.+....          ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++..   ...++
T Consensus        53 ~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  131 (307)
T 2nru_A           53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS  131 (307)
T ss_dssp             SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCC
T ss_pred             CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCC
Confidence            47889999985421          22467777777 9999999999999999999999999 8999999863   34589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.....++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       132 ~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~  170 (307)
T 2nru_A          132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF  170 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC
Confidence            999999999999999999999999999999999997664

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.86  E-value=2.6e-21  Score=126.42  Aligned_cols=104  Identities=14%  Similarity=0.139  Sum_probs=88.9

Q ss_pred             CCcEEEEEEeccc-cchhHHHHHhhhCCCCCcce---------------EEEEEEc-CCEEEEEecCCCCCHHHHHHhC-
Q psy14425          2 AGIVVVLEIMSRE-ASGNLLSAHYRLDSHPHINS---------------LHEVLLG-DKLAYLVFPPCSGDLHSYVRQR-   63 (114)
Q Consensus         2 t~~~~avK~~~~~-~~~~e~~~~~~~~~h~~i~~---------------~~~~~~~-~~~~~~v~e~~~~~l~~~~~~~-   63 (114)
                      .++.||+|.+... ...+|+..+.++ +|||+++               +++++.. .+..+++||+++++|.+++... 
T Consensus        74 ~~~~vavK~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~  152 (352)
T 2jii_A           74 QKQKFSLKLDAKDGRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSP  152 (352)
T ss_dssp             ---CEEEEEEETTSTHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSG
T ss_pred             cCceEEEEEecccchHHHHHHHHHHh-cccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCC
Confidence            3789999999754 455788888888 8888876               6777765 7889999999999999999875 


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                       ..+++..+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       153 ~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          153 KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence             6799999999999999999999999999999999999998765

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.86  E-value=1.1e-20  Score=124.39  Aligned_cols=102  Identities=23%  Similarity=0.253  Sum_probs=87.0

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+..+ +||||+++++++...+      ..+++||++.+++.+.+.  ..++
T Consensus        49 ~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~  125 (371)
T 2xrw_A           49 LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELD  125 (371)
T ss_dssp             TTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHH--SCCC
T ss_pred             CCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEEEEcCCCCHHHHHh--hccC
Confidence            68899999986532        12466677777 9999999999997654      789999999888888875  3589


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       126 ~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~  164 (371)
T 2xrw_A          126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  164 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC
Confidence            999999999999999999999999999999999997654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.86  E-value=1.4e-21  Score=127.24  Aligned_cols=105  Identities=10%  Similarity=0.149  Sum_probs=90.9

Q ss_pred             CCcEEEEEEeccc-----------------------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHH
Q psy14425          2 AGIVVVLEIMSRE-----------------------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLH   57 (114)
Q Consensus         2 t~~~~avK~~~~~-----------------------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~   57 (114)
                      +|+.||+|.+...                       ...+|+..+.++ +|||++++++++...+..+++||++ +++|.
T Consensus        53 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  131 (348)
T 2pml_X           53 DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSIL  131 (348)
T ss_dssp             TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEESSSEEEEEEECCTTCBSS
T ss_pred             CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEEEeccCCCcHH
Confidence            5789999998532                       223577778877 8999999999999999999999999 77999


Q ss_pred             HH------HHh--CCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCCc
Q psy14425         58 SY------VRQ--RKRLKEAEARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        58 ~~------~~~--~~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++      +..  ...++...+..++.|++.|+.|+|+ +|++|+||+|+||+++.++.
T Consensus       132 ~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~  190 (348)
T 2pml_X          132 KFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR  190 (348)
T ss_dssp             EESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSC
T ss_pred             HHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCc
Confidence            88      654  4669999999999999999999999 99999999999999976553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.86  E-value=5.5e-21  Score=123.84  Aligned_cols=104  Identities=17%  Similarity=0.257  Sum_probs=89.1

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-------------
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-------------   62 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-------------   62 (114)
                      ..||+|.+....       ..+|+..+.++.+||||+++++++..++..+++||++ +++|.+++..             
T Consensus        77 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  156 (333)
T 2i1m_A           77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI  156 (333)
T ss_dssp             CEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-----
T ss_pred             hHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccc
Confidence            579999986543       2246777777768999999999999999999999999 7899999864             


Q ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         63 -RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        63 -~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                       ...++......++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       157 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~  202 (333)
T 2i1m_A          157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV  202 (333)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGE
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCe
Confidence             234789999999999999999999999999999999999976553

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.86  E-value=8.5e-21  Score=121.07  Aligned_cols=104  Identities=20%  Similarity=0.288  Sum_probs=88.3

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEc-------------CCEEEEEecCC-CCCHHHHHHh
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLG-------------DKLAYLVFPPC-SGDLHSYVRQ   62 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~-------------~~~~~~v~e~~-~~~l~~~~~~   62 (114)
                      +|+.||+|.+....     ..+|+..+.++ +|||++++++++..             .+..+++||++ +++|.+++..
T Consensus        30 ~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  108 (303)
T 1zy4_A           30 DSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS  108 (303)
T ss_dssp             TCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHH
T ss_pred             CCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhc
Confidence            68899999986432     22467777777 99999999998854             46789999999 7899999975


Q ss_pred             CC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         63 RK-RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        63 ~~-~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .. .++....+.++.|++.|+.|||++|++|+||+|+||+++.++
T Consensus       109 ~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~  153 (303)
T 1zy4_A          109 ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR  153 (303)
T ss_dssp             SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCC
Confidence            43 578899999999999999999999999999999999997655

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.86  E-value=1e-20  Score=122.53  Aligned_cols=104  Identities=18%  Similarity=0.254  Sum_probs=88.9

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCC--EEEEEecCC-CCCHHHHHHhC-CCCCHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDK--LAYLVFPPC-SGDLHSYVRQR-KRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~--~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~   71 (114)
                      +|+.||+|.+.....      .+|+..+.++ +||||+++++++...+  .++++||++ +++|.+++... ..++...+
T Consensus        69 ~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  147 (326)
T 2w1i_A           69 TGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL  147 (326)
T ss_dssp             CCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHH
T ss_pred             CceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHH
Confidence            588999999865432      2467777777 9999999999987543  789999999 88999999765 45999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       148 ~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~  182 (326)
T 2w1i_A          148 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN  182 (326)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC
Confidence            99999999999999999999999999999997655

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.86  E-value=8.6e-21  Score=120.67  Aligned_cols=102  Identities=21%  Similarity=0.216  Sum_probs=86.5

Q ss_pred             CCcEEEEEEecccc-------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCC
Q psy14425          2 AGIVVVLEIMSREA-------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~-------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~   66 (114)
                      +++.||+|.+....             ..+|+..+.++ +||||+++++++.+..  +++||++ +++|.+.+... ..+
T Consensus        43 ~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~  119 (287)
T 4f0f_A           43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPI  119 (287)
T ss_dssp             TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCC
T ss_pred             CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCc
Confidence            68899999985322             22467777777 9999999999997765  6899999 79998888653 469


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~~~  106 (114)
                      ++.....++.|++.|+.|+|+++  ++|+||||+||+++.++
T Consensus       120 ~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~  161 (287)
T 4f0f_A          120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD  161 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccC
Confidence            99999999999999999999999  99999999999997655

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.86  E-value=3.8e-21  Score=129.55  Aligned_cols=104  Identities=16%  Similarity=0.201  Sum_probs=88.7

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      ++..||||.++...     ..+|+..+.++ +||||+++++++. .+..+++||++ +|+|.+++...  ..++......
T Consensus       211 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  288 (454)
T 1qcf_A          211 KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID  288 (454)
T ss_dssp             TTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHH
T ss_pred             CccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHH
Confidence            36789999997543     22577777777 9999999999986 56789999999 88999999643  3588999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||+++++||||||+|||++.++.
T Consensus       289 ~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~  322 (454)
T 1qcf_A          289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV  322 (454)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCc
Confidence            9999999999999999999999999999977653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.2e-20  Score=120.14  Aligned_cols=103  Identities=19%  Similarity=0.302  Sum_probs=88.3

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +++.||+|.+.....       .+|+..+.++ +||||+++++++. .+..+++||++ +++|.+++... ..++...+.
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  113 (287)
T 1u59_A           36 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA  113 (287)
T ss_dssp             CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHH
T ss_pred             CcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEec-CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHH
Confidence            467899999976432       2467777777 9999999999994 56689999999 78999998643 459999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       114 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~  147 (287)
T 1u59_A          114 ELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH  147 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC
Confidence            9999999999999999999999999999997665

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.86  E-value=7.8e-21  Score=132.13  Aligned_cols=102  Identities=19%  Similarity=0.295  Sum_probs=87.9

Q ss_pred             CcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +..||||.++...       ..+|+.++.++ +||||+++++++.. +.++++||++ +++|.+++... ..+++..+..
T Consensus       363 ~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~  440 (613)
T 2ozo_A          363 QIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE  440 (613)
T ss_dssp             EEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHH
T ss_pred             cEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHH
Confidence            4579999996542       22477777777 99999999999976 5689999999 88999998653 4599999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||+++++||||||+|||++.++
T Consensus       441 i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~  473 (613)
T 2ozo_A          441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH  473 (613)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCC
Confidence            999999999999999999999999999997665

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.86  E-value=2.5e-21  Score=126.32  Aligned_cols=104  Identities=14%  Similarity=0.118  Sum_probs=87.6

Q ss_pred             CCcEEEEEEeccccch--h---------------HHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG--N---------------LLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPCSGDLHSYV   60 (114)
Q Consensus         2 t~~~~avK~~~~~~~~--~---------------e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~~~~l~~~~   60 (114)
                      ++..+|+|.+......  .               |+..+..+ +||||+++++++..    ....+++||+++++|.+++
T Consensus        64 ~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l  142 (345)
T 2v62_A           64 KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKIS  142 (345)
T ss_dssp             GGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHC
T ss_pred             ccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccccCCCcEEEEEEeccCCCHHHHH
Confidence            4678999998654321  1               22333444 99999999999987    7889999999988999999


Q ss_pred             HhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         61 RQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+.+++..+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       143 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          143 GQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             BGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC
Confidence            7767899999999999999999999999999999999999998654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.85  E-value=1.2e-20  Score=126.42  Aligned_cols=106  Identities=19%  Similarity=0.212  Sum_probs=89.9

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhh-----CCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRL-----DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK--RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~-----~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~--~~~~~   69 (114)
                      +|+.||+|.+....     ...|+.++..+     .+|+|++++++++...+.++++||+++++|.+++....  .+++.
T Consensus       121 ~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~  200 (429)
T 3kvw_A          121 VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP  200 (429)
T ss_dssp             TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHH
T ss_pred             CCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHH
Confidence            68899999997543     22355555443     36789999999999999999999999889999987643  49999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|||+++++||||||+|||++.++.
T Consensus       201 ~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~  238 (429)
T 3kvw_A          201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR  238 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC
Confidence            99999999999999999999999999999999987664

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.85  E-value=3.3e-22  Score=131.82  Aligned_cols=105  Identities=11%  Similarity=0.133  Sum_probs=82.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhh--CCCCCcceEE-------EEEEcCCE-----------------EE
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRL--DSHPHINSLH-------EVLLGDKL-----------------AY   46 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~--~~h~~i~~~~-------~~~~~~~~-----------------~~   46 (114)
                      +|+.||||.+....         ..+|+.++..+  .+||||++++       +++...+.                 .+
T Consensus        97 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  176 (377)
T 3byv_A           97 TGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRF  176 (377)
T ss_dssp             CCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEE
T ss_pred             CCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEE
Confidence            68999999986331         12455332322  2899999988       77776542                 88


Q ss_pred             EEecCCCCCHHHHHHhCCCCCH-------HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         47 LVFPPCSGDLHSYVRQRKRLKE-------AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        47 ~v~e~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++||+++|+|.+++...+.++.       .....++.|++.|+.|||++|++||||||+|||++.++
T Consensus       177 lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~  243 (377)
T 3byv_A          177 FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG  243 (377)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             EEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            9999998899999976444444       77788999999999999999999999999999997655

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.85  E-value=1.9e-20  Score=121.10  Aligned_cols=106  Identities=12%  Similarity=0.184  Sum_probs=88.9

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-----CCCCCHH
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-----RKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-----~~~~~~~   69 (114)
                      +|+.||+|.+......       .|+..+.+..+||||+++++++..++..+++||++.+++.+++..     ...++..
T Consensus        46 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  125 (327)
T 3aln_A           46 SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE  125 (327)
T ss_dssp             TTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHH
T ss_pred             CCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHH
Confidence            6889999999754322       233334445599999999999999999999999997788887753     4668999


Q ss_pred             HHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~~  107 (114)
                      ....++.|++.|+.|+|++ |++|+||+|+||+++.++.
T Consensus       126 ~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~  164 (327)
T 3aln_A          126 ILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN  164 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE
T ss_pred             HHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC
Confidence            9999999999999999999 9999999999999977653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.85  E-value=9.9e-21  Score=124.24  Aligned_cols=103  Identities=17%  Similarity=0.255  Sum_probs=89.0

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.||+|.+.....       .+|+..+.++ +||||+++++++...     ...+++||+++++|.+++.. +.++..
T Consensus        51 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~-~~~~~~  128 (364)
T 3qyz_A           51 NKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSND  128 (364)
T ss_dssp             TTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHHH-CCCCHH
T ss_pred             CCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEcccCcCHHHHHHh-CCCCHH
Confidence            678999999964332       2477777777 999999999999754     46999999998899998865 569999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       129 ~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~  165 (364)
T 3qyz_A          129 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC  165 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCC
Confidence            9999999999999999999999999999999997764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.85  E-value=1.4e-20  Score=121.69  Aligned_cols=103  Identities=20%  Similarity=0.317  Sum_probs=91.0

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhC-CCCCcceEEEEEEcCCEEEEEecCC-C-CCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLD-SHPHINSLHEVLLGDKLAYLVFPPC-S-GDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~-~h~~i~~~~~~~~~~~~~~~v~e~~-~-~~l~~~~~~~~~~   66 (114)
                      +|+.||+|.+....            ...|+..+.++. .|+|++++++++..++..++++|++ + ++|.+++...+.+
T Consensus        67 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l  146 (320)
T 3a99_A           67 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL  146 (320)
T ss_dssp             TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSC
T ss_pred             CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCC
Confidence            67899999986442            224788888874 3699999999999999999999999 4 8999999877889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +...+..++.|++.|+.|||++|++|+||||+||+++.
T Consensus       147 ~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~  184 (320)
T 3a99_A          147 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL  184 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC
Confidence            99999999999999999999999999999999999983

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.85  E-value=8.6e-21  Score=122.04  Aligned_cols=104  Identities=20%  Similarity=0.265  Sum_probs=84.1

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC-----EEEEEecCC-CCCHHHHHHh-----
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK-----LAYLVFPPC-SGDLHSYVRQ-----   62 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~-----~~~~v~e~~-~~~l~~~~~~-----   62 (114)
                      +++.||+|.+....        ..+|+..+.++ +||||+++++++...+     ..+++||++ +++|.+++..     
T Consensus        61 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~  139 (313)
T 3brb_A           61 TSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET  139 (313)
T ss_dssp             CEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTT
T ss_pred             ceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhc
Confidence            45689999986442        22366667777 9999999999998654     359999999 8899999842     


Q ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         63 -RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        63 -~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                       ...++...++.++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       140 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          140 GPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             SCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC
Confidence             24599999999999999999999999999999999999997764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.85  E-value=1.3e-20  Score=122.83  Aligned_cols=103  Identities=17%  Similarity=0.265  Sum_probs=88.9

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~~   69 (114)
                      +|+.||+|.+.....       .+|+..+.++ +||||+++++++...     ...+++||++.++|.+++.. +.++..
T Consensus        35 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~  112 (353)
T 2b9h_A           35 TGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDD  112 (353)
T ss_dssp             TTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHH-CCCCHH
T ss_pred             CCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhh-cCCCHH
Confidence            688999999964332       2467777777 999999999987653     67999999998899998866 579999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .+..++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       113 ~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~  149 (353)
T 2b9h_A          113 HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC  149 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCC
Confidence            9999999999999999999999999999999997654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=1.1e-20  Score=120.62  Aligned_cols=102  Identities=21%  Similarity=0.236  Sum_probs=86.9

Q ss_pred             cEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEE-EEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          4 IVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLA-YLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~-~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      ..+|+|.+.....       .+|+..+.++ +||||+++++++...+.. ++++|++ +++|.+++.. ...++...+..
T Consensus        50 ~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~  128 (298)
T 3pls_A           50 IQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS  128 (298)
T ss_dssp             EEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHH
T ss_pred             eeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHH
Confidence            3799999865432       2466677777 999999999999866554 8999999 8999999976 45689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++|+|+||+||+++.++
T Consensus       129 i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~  161 (298)
T 3pls_A          129 FGLQVARGMEYLAEQKFVHRDLAARNCMLDESF  161 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC
Confidence            999999999999999999999999999997764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.85  E-value=1.1e-20  Score=122.26  Aligned_cols=104  Identities=17%  Similarity=0.222  Sum_probs=87.4

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhh-----CCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhCC--CCCHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRL-----DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK--RLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~-----~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~--~~~~~   69 (114)
                      +|+.||+|.+....     ...|+..+..+     ..|++++++++++...+..+++||+++++|.+++...+  .++..
T Consensus        39 ~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~  118 (339)
T 1z57_A           39 GGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD  118 (339)
T ss_dssp             TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHH
T ss_pred             CCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHH
Confidence            57899999996532     22455555544     23456999999999999999999999999999997654  58899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      .+..++.|++.|+.|+|++|++||||||+||+++..
T Consensus       119 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  154 (339)
T 1z57_A          119 HIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQS  154 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEecc
Confidence            999999999999999999999999999999999764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.85  E-value=7.9e-21  Score=122.67  Aligned_cols=101  Identities=19%  Similarity=0.326  Sum_probs=82.4

Q ss_pred             EEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEE------EEEecCC-CCCHHHHHHhCC-----
Q psy14425          5 VVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLA------YLVFPPC-SGDLHSYVRQRK-----   64 (114)
Q Consensus         5 ~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~------~~v~e~~-~~~l~~~~~~~~-----   64 (114)
                      .||+|.+....        ..+|+..+.++ +||||+++++++...+..      +++||++ +++|.+++....     
T Consensus        53 ~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~  131 (323)
T 3qup_A           53 KVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP  131 (323)
T ss_dssp             EEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---C
T ss_pred             eEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccc
Confidence            79999986542        22467777777 999999999999876655      9999999 889999985422     


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 -RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 -~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                       .++...+..++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       132 ~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A          132 FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence             589999999999999999999999999999999999997764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.85  E-value=4.3e-21  Score=126.40  Aligned_cols=103  Identities=23%  Similarity=0.310  Sum_probs=84.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+..+ +||||+++++++...      +.+++++|+++++|.+++.. ..++
T Consensus        53 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~  130 (367)
T 2fst_X           53 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLT  130 (367)
T ss_dssp             TTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC------CCCC
T ss_pred             CCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHhc-CCCC
Confidence            68899999986532        12467777777 899999999999754      56899999999999988855 6799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++||||||+||+++.++
T Consensus       131 ~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~  169 (367)
T 2fst_X          131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC  169 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC
Confidence            999999999999999999999999999999999997654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.85  E-value=9e-21  Score=121.13  Aligned_cols=104  Identities=18%  Similarity=0.206  Sum_probs=85.7

Q ss_pred             CCcEEEEEEeccccch---hHHHHHhhh-CCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG---NLLSAHYRL-DSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---~e~~~~~~~-~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+......   .|.+.+... .+||||+++++++..    ....+++||++ +++|.+++.. ..+++....
T Consensus        30 ~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~  108 (301)
T 3q4u_A           30 QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCL  108 (301)
T ss_dssp             TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHH
T ss_pred             CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh-cccCHHHHH
Confidence            5788999999765433   244444432 499999999998653    35689999999 8899999954 579999999


Q ss_pred             HHHHHHHHHHHHHH--------HCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACH--------AQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh--------~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|        +++++||||||+||+++.++
T Consensus       109 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~  150 (301)
T 3q4u_A          109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG  150 (301)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC
Confidence            99999999999999        99999999999999997654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.85  E-value=3.2e-20  Score=119.77  Aligned_cols=105  Identities=20%  Similarity=0.298  Sum_probs=86.8

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhh--CCCCCcceEEEEEE-----cCCEEEEEecCCCCCHHHHHHhCC--
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRL--DSHPHINSLHEVLL-----GDKLAYLVFPPCSGDLHSYVRQRK--   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~--~~h~~i~~~~~~~~-----~~~~~~~v~e~~~~~l~~~~~~~~--   64 (114)
                      +|+.||+|.+....        ..+|+..+..+  .+||||+++++++.     .....+++||++.++|.+++....  
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~  115 (326)
T 1blx_A           36 GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP  115 (326)
T ss_dssp             TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTT
T ss_pred             CCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccC
Confidence            47889999985432        22455555443  28999999999987     557799999999889999987643  


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++...+..++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       116 ~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~  157 (326)
T 1blx_A          116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG  157 (326)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC
Confidence            489999999999999999999999999999999999997654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.85  E-value=2.6e-20  Score=118.20  Aligned_cols=102  Identities=19%  Similarity=0.290  Sum_probs=86.6

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +..||+|.+.....       .+|+..+.++ +|||++++++++..+ ..+++||++ +++|.+++... ..++......
T Consensus        40 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  117 (281)
T 3cc6_A           40 KINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVL  117 (281)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHH
T ss_pred             cceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHH
Confidence            34699999875432       2467777778 999999999998754 568999999 78999999654 4599999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+|+||+||+++.++
T Consensus       118 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  150 (281)
T 3cc6_A          118 YSLQICKAMAYLESINCVHRDIAVRNILVASPE  150 (281)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHHCCcccCCCccceEEECCCC
Confidence            999999999999999999999999999997765

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.85  E-value=1.4e-20  Score=120.47  Aligned_cols=105  Identities=21%  Similarity=0.352  Sum_probs=86.1

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEE--cCCEEEEEecCCCCCHHHHHHh--CCCCC
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLL--GDKLAYLVFPPCSGDLHSYVRQ--RKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~--~~~~~~~v~e~~~~~l~~~~~~--~~~~~   67 (114)
                      +|+.+|+|.+....          ..+|+..+.++ +||||+++++++.  ..+..+++||++.+++.+++..  ...++
T Consensus        29 ~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~  107 (305)
T 2wtk_C           29 TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFP  107 (305)
T ss_dssp             TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCC
T ss_pred             CCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccC
Confidence            67899999986432          22467777777 9999999999984  4567999999996668777764  35699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ......++.|++.|+.|||++|++|+||+|+||+++.++.
T Consensus       108 ~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~  147 (305)
T 2wtk_C          108 VCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT  147 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCc
Confidence            9999999999999999999999999999999999976543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=9.2e-21  Score=124.95  Aligned_cols=105  Identities=11%  Similarity=0.192  Sum_probs=87.2

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhC-------CCCCcceEEEEEE----cCCEEEEEecCCCCCHHHHHHhC--
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLD-------SHPHINSLHEVLL----GDKLAYLVFPPCSGDLHSYVRQR--   63 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~-------~h~~i~~~~~~~~----~~~~~~~v~e~~~~~l~~~~~~~--   63 (114)
                      +|+.||+|.+....     ..+|+..+..+.       +|+|+++++++|.    ....++++||++++++.+.+...  
T Consensus        61 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~  140 (397)
T 1wak_A           61 GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNY  140 (397)
T ss_dssp             TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTT
T ss_pred             CCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhccc
Confidence            58899999997543     224666666552       2888999999997    56689999999988888777543  


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         64 KRLKEAEARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      ..++...+..++.|++.|+.|||++ |++||||||+|||++.++
T Consensus       141 ~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            4699999999999999999999998 999999999999998664

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.85  E-value=1.2e-20  Score=127.04  Aligned_cols=102  Identities=18%  Similarity=0.192  Sum_probs=87.7

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~~~~~~   74 (114)
                      +..||+|.+....     ..+|+..+.++ +||||+++++++.. +..+++||++ +++|.+++..  ...++......+
T Consensus       208 ~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i  285 (452)
T 1fmk_A          208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM  285 (452)
T ss_dssp             TEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHH
T ss_pred             CceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHH
Confidence            4679999997543     23577778887 99999999999866 6789999999 8899999964  245899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|||+++++||||||+|||++.++
T Consensus       286 ~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~  317 (452)
T 1fmk_A          286 AAQIASGMAYVERMNYVHRDLRAANILVGENL  317 (452)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChhhEEECCCC
Confidence            99999999999999999999999999997654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.84  E-value=1.1e-20  Score=119.60  Aligned_cols=104  Identities=22%  Similarity=0.396  Sum_probs=87.3

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEE--cCCEEEEEecCC-CCCHHHHHHhC----CCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLL--GDKLAYLVFPPC-SGDLHSYVRQR----KRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~--~~~~~~~v~e~~-~~~l~~~~~~~----~~~   66 (114)
                      +|+.||+|.+....        ..+|+..+.++ +||||+++++++.  ..+..+++||++ +++|.+++...    ..+
T Consensus        30 ~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  108 (279)
T 2w5a_A           30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL  108 (279)
T ss_dssp             TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCC
T ss_pred             CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCC
Confidence            68899999996543        22466677777 9999999999885  467899999999 78999998642    349


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQG-----IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~-----i~h~~lk~~nil~~~~~  106 (114)
                      ++...+.++.|++.|+.|+|+++     ++|+||+|+||+++.++
T Consensus       109 ~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~  153 (279)
T 2w5a_A          109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ  153 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC
Confidence            99999999999999999999999     99999999999997655

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.84  E-value=4.6e-21  Score=123.42  Aligned_cols=106  Identities=20%  Similarity=0.264  Sum_probs=89.3

Q ss_pred             cEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHH
Q psy14425          4 IVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~   73 (114)
                      ..+|+|.+....        ..+|+..+.++ +|||++++++++...+..+++||++ +++|.+++...+ .++......
T Consensus        56 ~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~  134 (319)
T 2y4i_B           56 GEVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ  134 (319)
T ss_dssp             SSEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHH
T ss_pred             CeEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHH
Confidence            358899885432        23467777777 9999999999999999999999999 789999997644 689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcccc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVG  110 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~  110 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++++..+++
T Consensus       135 i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~  171 (319)
T 2y4i_B          135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVIT  171 (319)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEEC
T ss_pred             HHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEe
Confidence            9999999999999999999999999999986655554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.1e-20  Score=121.03  Aligned_cols=104  Identities=18%  Similarity=0.207  Sum_probs=86.3

Q ss_pred             CCcEEEEEEeccccch---hHHHHHhh-hCCCCCcceEEEEEEcC----CEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG---NLLSAHYR-LDSHPHINSLHEVLLGD----KLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---~e~~~~~~-~~~h~~i~~~~~~~~~~----~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+......   .+...+.. ..+||||+++++++...    ...+++||++ +++|.+++.. ..++.....
T Consensus        59 ~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~  137 (337)
T 3mdy_A           59 RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKSML  137 (337)
T ss_dssp             TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHH
T ss_pred             CCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHH
Confidence            4788999998654332   23333322 24999999999999876    7899999999 8899999965 469999999


Q ss_pred             HHHHHHHHHHHHHHHC--------CCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQ--------GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~--------~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++        +++||||||+||+++.++
T Consensus       138 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~  179 (337)
T 3mdy_A          138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG  179 (337)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence            9999999999999998        999999999999997654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.84  E-value=7.3e-21  Score=120.61  Aligned_cols=104  Identities=23%  Similarity=0.298  Sum_probs=87.3

Q ss_pred             CCcEEEEEEeccccc----hhHHHHHhhhCCCCCcceEEEEEEcC-CEEEEEecCC-CCCHHHHHHhCCC--CCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS----GNLLSAHYRLDSHPHINSLHEVLLGD-KLAYLVFPPC-SGDLHSYVRQRKR--LKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~v~e~~-~~~l~~~~~~~~~--~~~~~~~~   73 (114)
                      +|+.||+|.+.....    .+|+..+.++ +|||++++++++... +..+++||++ +++|.+++...+.  ++......
T Consensus        43 ~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  121 (278)
T 1byg_A           43 RGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK  121 (278)
T ss_dssp             TTEEEEEEECCCCC--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHH
T ss_pred             cCCEEEEEEecchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHH
Confidence            478899999975532    2467777777 999999999997544 5789999999 7799999975433  88999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       122 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  154 (278)
T 1byg_A          122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN  154 (278)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHhCCccccCCCcceEEEeCCC
Confidence            999999999999999999999999999997655

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.84  E-value=3.2e-20  Score=120.50  Aligned_cols=104  Identities=20%  Similarity=0.179  Sum_probs=88.4

Q ss_pred             CCcEEEEEEeccccch---hHHHHHhhh-CCCCCcceEEEEEEcCC----EEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREASG---NLLSAHYRL-DSHPHINSLHEVLLGDK----LAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---~e~~~~~~~-~~h~~i~~~~~~~~~~~----~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||+|.+......   .|...+... .+||||+++++++...+    ..+++||++ +++|.+++.. ..+++....
T Consensus        64 ~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~  142 (342)
T 1b6c_B           64 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMI  142 (342)
T ss_dssp             TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHH
T ss_pred             cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-cCccHHHHH
Confidence            4789999999755432   355555542 49999999999998775    899999999 7899999966 569999999


Q ss_pred             HHHHHHHHHHHHHH--------HCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACH--------AQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh--------~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|        +++++|+||||+||+++.++
T Consensus       143 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~  184 (342)
T 1b6c_B          143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG  184 (342)
T ss_dssp             HHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence            99999999999999        89999999999999997655

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.84  E-value=5.1e-20  Score=119.37  Aligned_cols=101  Identities=20%  Similarity=0.225  Sum_probs=83.1

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      +||+|.+....       ..+|+..+.++ +||||+++++++..++ .++++|++ +++|.+++.. ...++...+..++
T Consensus        46 ~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  123 (327)
T 3poz_A           46 PVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  123 (327)
T ss_dssp             EEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHH
T ss_pred             EEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            46888774332       22467777777 9999999999998765 67788888 8999999876 4569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|++.|+.|||+++++||||||+||+++.++.
T Consensus       124 ~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~  155 (327)
T 3poz_A          124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH  155 (327)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE
T ss_pred             HHHHHHHHHHhhCCeeCCCCChheEEECCCCC
Confidence            99999999999999999999999999977553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.84  E-value=6.8e-21  Score=122.46  Aligned_cols=105  Identities=21%  Similarity=0.407  Sum_probs=86.1

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhC---CCCCcceEEEEEEcCCEEEEEecC-C-CCCHHHHHHhCC
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLD---SHPHINSLHEVLLGDKLAYLVFPP-C-SGDLHSYVRQRK   64 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~---~h~~i~~~~~~~~~~~~~~~v~e~-~-~~~l~~~~~~~~   64 (114)
                      +|+.||+|.+....            ...|+..+.++.   +||||+++++++...+..++++|+ + +++|.+++...+
T Consensus        55 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~  134 (312)
T 2iwi_A           55 DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG  134 (312)
T ss_dssp             TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC
T ss_pred             CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC
Confidence            57899999985432            223666666653   799999999999999999999999 5 789999998777


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe-cCC
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFC-NAQ  106 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~-~~~  106 (114)
                      .+++..+..++.|++.|+.|+|++|++|+||+|+||+++ .++
T Consensus       135 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  177 (312)
T 2iwi_A          135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG  177 (312)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC
Confidence            899999999999999999999999999999999999998 443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.84  E-value=2.4e-20  Score=123.78  Aligned_cols=100  Identities=15%  Similarity=0.214  Sum_probs=82.5

Q ss_pred             CcEEEEEEeccc--cchhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCCCCCHHHHHH----hCCCCCHHH
Q psy14425          3 GIVVVLEIMSRE--ASGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPCSGDLHSYVR----QRKRLKEAE   70 (114)
Q Consensus         3 ~~~~avK~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~----~~~~~~~~~   70 (114)
                      +..+|+|.+..+  ...+|+.++..+ +||||++++++|...+      .++++|||+.+++...+.    ....++...
T Consensus        64 ~~~~aikk~~~~~~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~  142 (394)
T 4e7w_A           64 SDEVAIKKVLQDKRFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL  142 (394)
T ss_dssp             TEEEEEEEEECCTTSCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHH
T ss_pred             CCeEEEEEEecCcchHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHH
Confidence            345888887543  344688888877 9999999999996433      488999999776665543    246799999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      ++.++.|++.|+.|||++|++||||||+||+++
T Consensus       143 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~  175 (394)
T 4e7w_A          143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD  175 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc
Confidence            999999999999999999999999999999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.84  E-value=1e-20  Score=124.56  Aligned_cols=103  Identities=23%  Similarity=0.305  Sum_probs=87.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEE------EEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLA------YLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~------~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+....        ..+|+..+..+ +||||+++++++...+..      +++||++.++|.+.+.  ..++
T Consensus        66 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~  142 (371)
T 4exu_A           66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG--MEFS  142 (371)
T ss_dssp             TTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTT--SCCC
T ss_pred             CCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEEEccccccHHHHhh--cCCC
Confidence            68999999996532        22466677777 999999999999876654      9999999888888773  3499


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..+..++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       143 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~  182 (371)
T 4exu_A          143 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE  182 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCC
Confidence            9999999999999999999999999999999999976653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.84  E-value=1.6e-20  Score=119.02  Aligned_cols=103  Identities=16%  Similarity=0.221  Sum_probs=87.6

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      +++.||+|.+....     ..+|+..+.++ +|||++++++++. .+..+++||++ +++|.+++....  .++...+..
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~  113 (279)
T 1qpc_A           36 GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD  113 (279)
T ss_dssp             TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHH
T ss_pred             CCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHH
Confidence            35689999986543     23577778877 9999999999986 45688999999 889999986432  699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       114 i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~  146 (279)
T 1qpc_A          114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTL  146 (279)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC
Confidence            999999999999999999999999999997654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.84  E-value=9e-20  Score=117.26  Aligned_cols=105  Identities=13%  Similarity=0.201  Sum_probs=86.7

Q ss_pred             CCcEEEEEEeccccchh-------HHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREASGN-------LLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~-------e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +|+.||+|.+.......       +...+.+..+||||+++++++..++..+++||++++.+..+... ...++...+..
T Consensus        49 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~  128 (318)
T 2dyl_A           49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGK  128 (318)
T ss_dssp             TCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHH
T ss_pred             CCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEeccCCcHHHHHHHhccCCCHHHHHH
Confidence            68999999997653321       23333444599999999999999999999999997666666543 56799999999


Q ss_pred             HHHHHHHHHHHHHHC-CCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQ-GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++ |++|+||+|+||+++.++
T Consensus       129 ~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~  162 (318)
T 2dyl_A          129 MTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG  162 (318)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC
Confidence            999999999999996 999999999999997654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.84  E-value=3.2e-20  Score=118.62  Aligned_cols=102  Identities=21%  Similarity=0.258  Sum_probs=85.8

Q ss_pred             cEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEE-cCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          4 IVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLL-GDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      ..+|+|.+.....       .+|+..+.++ +|||++++++++. ..+..+++||++ +++|.+++... ..++......
T Consensus        54 ~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  132 (298)
T 3f66_A           54 IHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG  132 (298)
T ss_dssp             EEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHH
T ss_pred             eEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHH
Confidence            3589999865432       2466677777 9999999999854 566889999999 78999999753 4589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++|+||||+||+++.++
T Consensus       133 i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~  165 (298)
T 3f66_A          133 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF  165 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHhCCccCCCCchheEEECCCC
Confidence            999999999999999999999999999997764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.84  E-value=1.1e-19  Score=115.93  Aligned_cols=101  Identities=13%  Similarity=0.110  Sum_probs=84.6

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCC-cceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPH-INSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~-i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      +|+.||+|.+....    ...|+..+..+ +|++ +..+..++...+..+++||+++++|.+++.. ...++...+..++
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~  111 (296)
T 3uzp_A           33 AGEEVAIKLECVKTKHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA  111 (296)
T ss_dssp             TTEEEEEEEEESCSSCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             CCcEEEEEEecCCcchhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHH
Confidence            68899999986443    33577788888 6655 4455555577889999999999999999974 4569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      .|++.|+.|+|++|++|+||||+||+++
T Consensus       112 ~qi~~~l~~lH~~~ivH~dlkp~NIl~~  139 (296)
T 3uzp_A          112 DQMISRIEYIHSKNFIHRDVKPDNFLMG  139 (296)
T ss_dssp             HHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             HHHHHHHHHHHhCCeeeCCCCHHHeEEe
Confidence            9999999999999999999999999994

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.84  E-value=1.7e-20  Score=128.64  Aligned_cols=102  Identities=18%  Similarity=0.192  Sum_probs=87.7

Q ss_pred             CcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHHHHHHH
Q psy14425          3 GIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEAEARKL   74 (114)
Q Consensus         3 ~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~~~~~~   74 (114)
                      +..||||.+....     ..+|+.++.++ +||||+++++++.. +..+++||++ +++|.+++..  ...++...+..+
T Consensus       291 ~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i  368 (535)
T 2h8h_A          291 TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM  368 (535)
T ss_dssp             TEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHH
T ss_pred             CceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHH
Confidence            4679999997543     23577788887 99999999999866 6789999999 8899999964  245899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|||+++++||||||+|||++.++
T Consensus       369 ~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~  400 (535)
T 2h8h_A          369 AAQIASGMAYVERMNYVHRDLRAANILVGENL  400 (535)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             HHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC
Confidence            99999999999999999999999999997654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.84  E-value=1.3e-19  Score=115.45  Aligned_cols=100  Identities=13%  Similarity=0.115  Sum_probs=83.8

Q ss_pred             CCcEEEEEEeccc----cchhHHHHHhhhCCCCC-cceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          2 AGIVVVLEIMSRE----ASGNLLSAHYRLDSHPH-INSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         2 t~~~~avK~~~~~----~~~~e~~~~~~~~~h~~-i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      +|+.||+|.+...    ....|...+..+ +|++ +..+..++...+..+++||+++++|.+++.. ...++...+..++
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~  111 (296)
T 4hgt_A           33 AGEEVAIKLECVKTKHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA  111 (296)
T ss_dssp             TTEEEEEEEEEC---CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHH
T ss_pred             CCceEEEEeecccccchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHH
Confidence            6789999987433    344678888888 5555 5555566678889999999999999999974 4569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEE
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVF  102 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~  102 (114)
                      .|++.|+.|+|++|++|+||||+||++
T Consensus       112 ~qi~~~l~~LH~~~ivH~Dlkp~NIl~  138 (296)
T 4hgt_A          112 DQMISRIEYIHSKNFIHRDVKPDNFLM  138 (296)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHeee
Confidence            999999999999999999999999999

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.84  E-value=3.1e-20  Score=119.45  Aligned_cols=103  Identities=21%  Similarity=0.229  Sum_probs=87.1

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---~~~~~~~~~   73 (114)
                      +++.||+|.+....    ..+|+..+.++ +||||+++++++.+  ..+++|||+ +++|.+++....   .++......
T Consensus        30 ~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  106 (307)
T 2eva_A           30 RAKDVAIKQIESESERKAFIVELRQLSRV-NHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS  106 (307)
T ss_dssp             TTEEEEEEECSSTTHHHHHHHHHHHHHHC-CCTTBCCEEEBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHH
T ss_pred             CCeeEEEEEecChhHHHHHHHHHHHHhcC-CCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHH
Confidence            36789999996543    23467777777 99999999998764  478999999 889999997644   378889999


Q ss_pred             HHHHHHHHHHHHHH---CCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHA---QGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~---~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||+   +|++|+||||+||+++.++.
T Consensus       107 ~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~  143 (307)
T 2eva_A          107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT  143 (307)
T ss_dssp             HHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT
T ss_pred             HHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC
Confidence            99999999999999   89999999999999987664

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.84  E-value=1.3e-19  Score=123.04  Aligned_cols=102  Identities=15%  Similarity=0.117  Sum_probs=87.6

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~~   76 (114)
                      +|+.||||.+....    ...|..++..+..++++..+..++...+..+++||+++++|.+++.. ...+++..+..++.
T Consensus        31 ~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~  110 (483)
T 3sv0_A           31 TNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAD  110 (483)
T ss_dssp             TCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             CCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHH
Confidence            58899999875432    34577788888455677777777788899999999999999999975 45799999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      |++.|+.|||+++++||||||+|||++
T Consensus       111 qi~~aL~yLH~~gIvHrDIKP~NILl~  137 (483)
T 3sv0_A          111 QMINRVEFVHSKSFLHRDIKPDNFLMG  137 (483)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             HHHHHHHHHHHCCEeecccCcceEEEe
Confidence            999999999999999999999999994

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.84  E-value=2.8e-20  Score=120.45  Aligned_cols=100  Identities=23%  Similarity=0.203  Sum_probs=83.7

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      ++|+|.+....       ..+|+..+.++ +||||+++++++. .+..++++|++ +++|.+++... +.+++..+..++
T Consensus        44 kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  121 (325)
T 3kex_A           44 PVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG  121 (325)
T ss_dssp             EEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHH
T ss_pred             EEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHH
Confidence            37888774322       23477777777 9999999999986 45688999999 89999998764 468999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .|++.|+.|||++|++||||||+||+++.++
T Consensus       122 ~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~  152 (325)
T 3kex_A          122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPS  152 (325)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSSTTEEESSSS
T ss_pred             HHHHHHHHHHHhCCCCCCccchheEEECCCC
Confidence            9999999999999999999999999996654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.83  E-value=9.8e-20  Score=118.96  Aligned_cols=102  Identities=16%  Similarity=0.262  Sum_probs=82.5

Q ss_pred             CCcEEEEEEecccc--ch---hHHHHHhhhCCCCCcceEEEEEEcCC-------EEEEEecCCCCCHHHHHH----hCCC
Q psy14425          2 AGIVVVLEIMSREA--SG---NLLSAHYRLDSHPHINSLHEVLLGDK-------LAYLVFPPCSGDLHSYVR----QRKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~--~~---~e~~~~~~~~~h~~i~~~~~~~~~~~-------~~~~v~e~~~~~l~~~~~----~~~~   65 (114)
                      +|+.||+|.+..+.  ..   .++..+..+ +||||++++++|...+       .++++||++.+++...+.    ....
T Consensus        47 ~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~  125 (360)
T 3e3p_A           47 TGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVA  125 (360)
T ss_dssp             TCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCC
T ss_pred             CCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccC
Confidence            68899999885442  12   244455666 9999999999996533       389999999777665543    3456


Q ss_pred             CCHHHHHHHHHHHHHHHHHHH--HCCCccCCCCCCcEEEec
Q psy14425         66 LKEAEARKLFRQIAETVRACH--AQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh--~~~i~h~~lk~~nil~~~  104 (114)
                      ++...+..++.|++.|+.|+|  ++|++||||||+||+++.
T Consensus       126 ~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~  166 (360)
T 3e3p_A          126 PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE  166 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC
Confidence            899999999999999999999  999999999999999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.83  E-value=2.2e-20  Score=122.01  Aligned_cols=102  Identities=24%  Similarity=0.305  Sum_probs=86.3

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEcCCE------EEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLGDKL------AYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~~~~------~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      +|+.||+|.+.....        .+|+..+..+ +||||+++++++...+.      ++++||++.++|.+.+.  ..++
T Consensus        48 ~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~  124 (353)
T 3coi_A           48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG--LKFS  124 (353)
T ss_dssp             TTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTT--SCCC
T ss_pred             CCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEEeccccCCHHHHhc--CCCC
Confidence            689999999965321        2366677777 99999999999986653      59999999888887763  3499


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ...+..++.|++.|+.|||++|++|+||+|+||+++.++
T Consensus       125 ~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~  163 (353)
T 3coi_A          125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC  163 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC
Confidence            999999999999999999999999999999999997765

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.83  E-value=8.7e-20  Score=127.73  Aligned_cols=102  Identities=20%  Similarity=0.313  Sum_probs=86.4

Q ss_pred             CcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      +..+|+|.+.....       .+|+..+.++ +||||+++++++. .+..+++||++ +++|.+++... ..+++.....
T Consensus       418 ~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~  495 (656)
T 2j0j_A          418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL  495 (656)
T ss_dssp             CEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHH
T ss_pred             cEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHH
Confidence            45789998865332       2466677777 9999999999984 46689999999 89999999754 3689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++||||||+|||++.++
T Consensus       496 i~~qi~~aL~~LH~~givHrDikp~NILl~~~~  528 (656)
T 2j0j_A          496 YAYQLSTALAYLESKRFVHRDIAARNVLVSSND  528 (656)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHhCCccccccchHhEEEeCCC
Confidence            999999999999999999999999999997655

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=2.5e-20  Score=123.03  Aligned_cols=102  Identities=21%  Similarity=0.257  Sum_probs=84.6

Q ss_pred             cEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEE-cCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          4 IVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLL-GDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      ..+|+|.++....       .+|+..+.++ +||||+++++++. ..+..+++||++ +++|.+++... ..++......
T Consensus       118 ~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  196 (373)
T 3c1x_A          118 IHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG  196 (373)
T ss_dssp             EEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHH
T ss_pred             EEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHH
Confidence            4689998865332       1355556666 9999999999865 456789999999 88999999754 4588999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|||++|++||||||+||+++.++
T Consensus       197 i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  229 (373)
T 3c1x_A          197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF  229 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             HHHHHHHHHHHHHHCCEecCccchheEEECCCC
Confidence            999999999999999999999999999997654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.82  E-value=2e-19  Score=116.70  Aligned_cols=101  Identities=20%  Similarity=0.225  Sum_probs=83.7

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      ++|+|.+....       ..+|+..+.++ +||||+++++++..+. .+++++++ +++|.+++.. ...++...+..++
T Consensus        46 kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~  123 (327)
T 3lzb_A           46 PVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  123 (327)
T ss_dssp             EEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             EEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            35777764322       22467777777 9999999999998765 67888888 8999999876 3569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .|++.|+.|||++|++||||||+||+++.++.
T Consensus       124 ~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~  155 (327)
T 3lzb_A          124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH  155 (327)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE
T ss_pred             HHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC
Confidence            99999999999999999999999999977553

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.82  E-value=3.3e-20  Score=120.23  Aligned_cols=104  Identities=19%  Similarity=0.159  Sum_probs=82.8

Q ss_pred             CCcEEEEEEeccccchh---HHHHHh-hhCCCCCcceEEEEEE-----cCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASGN---LLSAHY-RLDSHPHINSLHEVLL-----GDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~---e~~~~~-~~~~h~~i~~~~~~~~-----~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||+|.+.......   +..+.. ...+|||++++++.+.     ....++++|||+ +++|.+++.. ...++...
T Consensus        35 ~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~  113 (336)
T 3g2f_A           35 DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL-HTSDWVSS  113 (336)
T ss_dssp             TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH-CCBCHHHH
T ss_pred             CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhh-cccchhHH
Confidence            57899999997554332   222221 2359999999998654     234689999999 8899999966 44588889


Q ss_pred             HHHHHHHHHHHHHHHHC---------CCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQ---------GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~---------~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++         +++||||||+|||++.++
T Consensus       114 ~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~  157 (336)
T 3g2f_A          114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG  157 (336)
T ss_dssp             HHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC
Confidence            99999999999999999         999999999999997754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.82  E-value=7e-20  Score=116.51  Aligned_cols=100  Identities=18%  Similarity=0.211  Sum_probs=83.0

Q ss_pred             EEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          5 VVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         5 ~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      .||+|.+....         ..+|+..+.++ +|||++++++++..++ .++++|++ +++|.+++... ..++......
T Consensus        48 ~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  125 (291)
T 1u46_A           48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSR  125 (291)
T ss_dssp             EEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHH
T ss_pred             EEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHH
Confidence            68999886432         12467777777 9999999999998765 88999999 88999998653 5699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ++.|++.|+.|+|++|++|+||+|+||+++.++
T Consensus       126 ~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~  158 (291)
T 1u46_A          126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRD  158 (291)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT
T ss_pred             HHHHHHHHHHHHHhCCcccCCCchheEEEcCCC
Confidence            999999999999999999999999999997655

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.82  E-value=1.9e-19  Score=114.73  Aligned_cols=103  Identities=17%  Similarity=0.167  Sum_probs=84.3

Q ss_pred             CcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHH
Q psy14425          3 GIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      +..+|+|.+....        ..+|+..+.++ +|||+++++++. .....+++||++ +++|.+.+.. ...++...+.
T Consensus        46 ~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  123 (289)
T 3og7_A           46 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLI  123 (289)
T ss_dssp             SSEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHH
T ss_pred             cCceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHH
Confidence            3468999986443        22467777777 999999999964 556689999999 7899999854 3569999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|||++|++|+||||+||+++.++.
T Consensus       124 ~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~  158 (289)
T 3og7_A          124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT  158 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred             HHHHHHHHHHHHHHhCCcccccCccceEEECCCCC
Confidence            99999999999999999999999999999987653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.82  E-value=5.1e-20  Score=121.12  Aligned_cols=106  Identities=15%  Similarity=0.081  Sum_probs=71.4

Q ss_pred             CCcEEEEEEeccccch---------hHHHHHhhhC-CCCCcceEE-------EEEEcC-----------------CEEEE
Q psy14425          2 AGIVVVLEIMSREASG---------NLLSAHYRLD-SHPHINSLH-------EVLLGD-----------------KLAYL   47 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e~~~~~~~~-~h~~i~~~~-------~~~~~~-----------------~~~~~   47 (114)
                      +|+.||+|.+......         +|...+..+. +|||+++++       +++...                 ..+++
T Consensus        86 ~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (371)
T 3q60_A           86 RLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLL  165 (371)
T ss_dssp             TTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEE
T ss_pred             CCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEE
Confidence            6889999999765421         2333233332 699988755       555433                 34899


Q ss_pred             EecCCCCCHHHHHHhC-CCCCHHHH------HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         48 VFPPCSGDLHSYVRQR-KRLKEAEA------RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        48 v~e~~~~~l~~~~~~~-~~~~~~~~------~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +|||+.++|.+++... ..++....      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       166 v~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~  232 (371)
T 3q60_A          166 LMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR  232 (371)
T ss_dssp             EECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSC
T ss_pred             EecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCC
Confidence            9999999999999753 23444444      567799999999999999999999999999977653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.81  E-value=4.3e-20  Score=129.20  Aligned_cols=105  Identities=30%  Similarity=0.444  Sum_probs=89.9

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCC-CCCHHHHHHhCC---
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPC-SGDLHSYVRQRK---   64 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~-~~~l~~~~~~~~---   64 (114)
                      +|+.||+|.+....       ...|+.++.++ +||||+++++++..      .+..+++|||+ +++|.+++....   
T Consensus        38 tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~  116 (676)
T 3qa8_A           38 TGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC  116 (676)
T ss_dssp             TTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTT
T ss_pred             CCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCC
Confidence            68899999986542       22467777777 99999999999765      67789999999 889999997643   


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+++..+..++.|++.|+.|+|++|++|+||+|+||+++.++.
T Consensus       117 ~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~  159 (676)
T 3qa8_A          117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQ  159 (676)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCC
Confidence            5889999999999999999999999999999999999986653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.81  E-value=3.6e-19  Score=115.77  Aligned_cols=100  Identities=13%  Similarity=0.187  Sum_probs=83.0

Q ss_pred             cEEEEEEecccc-----chhHHHHHhhhCCCC------CcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC--CCCCHHH
Q psy14425          4 IVVVLEIMSREA-----SGNLLSAHYRLDSHP------HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAE   70 (114)
Q Consensus         4 ~~~avK~~~~~~-----~~~e~~~~~~~~~h~------~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~--~~~~~~~   70 (114)
                      +.||+|.+....     ...|+..+..+ +|+      +++.+++++...+..+++||++++++.+.+...  ..++...
T Consensus        46 ~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~  124 (355)
T 2eu9_A           46 SQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH  124 (355)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHH
T ss_pred             eEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHH
Confidence            689999997542     22356666555 333      488999999999999999999988888877654  3699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      +..++.|++.|+.|||++|++||||||+||+++.
T Consensus       125 ~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~  158 (355)
T 2eu9_A          125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVN  158 (355)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec
Confidence            9999999999999999999999999999999943

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.80  E-value=1.8e-19  Score=118.16  Aligned_cols=103  Identities=15%  Similarity=0.228  Sum_probs=85.9

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhC----------CCCCcceEEEEEEcCC----EEEEEecCCCCCHHHHHHh
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLD----------SHPHINSLHEVLLGDK----LAYLVFPPCSGDLHSYVRQ   62 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~----------~h~~i~~~~~~~~~~~----~~~~v~e~~~~~l~~~~~~   62 (114)
                      +|+.||+|.+..+.     ..+|+..+.++.          +||||+++++++...+    .++++||+++++|.+++..
T Consensus        43 ~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~  122 (373)
T 1q8y_A           43 NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK  122 (373)
T ss_dssp             TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHH
T ss_pred             CCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHH
Confidence            68899999997543     234566555541          3899999999997544    7999999999999999975


Q ss_pred             C--CCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCCCcEEEec
Q psy14425         63 R--KRLKEAEARKLFRQIAETVRACHAQ-GIVLRDLKLRKFVFCN  104 (114)
Q Consensus        63 ~--~~~~~~~~~~~~~~~~~~l~~lh~~-~i~h~~lk~~nil~~~  104 (114)
                      .  ..++...+..++.|++.|+.|||++ |++||||||+||+++.
T Consensus       123 ~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~  167 (373)
T 1q8y_A          123 YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  167 (373)
T ss_dssp             TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             hhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence            3  4599999999999999999999998 9999999999999964

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.80  E-value=1.1e-18  Score=115.26  Aligned_cols=103  Identities=19%  Similarity=0.220  Sum_probs=85.4

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCC-----CcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC--CCCCHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHP-----HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~-----~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~--~~~~~~   69 (114)
                      +|+.||+|.+.....     ..|...+..+..|+     +++.+++++...+..+++||+++++|.+++...  ..++..
T Consensus        78 ~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~  157 (382)
T 2vx3_A           78 EQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN  157 (382)
T ss_dssp             TTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHH
T ss_pred             CCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHH
Confidence            678999999975431     23555555553354     499999999999999999999988999999764  459999


Q ss_pred             HHHHHHHHHHHHHHHHH--HCCCccCCCCCCcEEEec
Q psy14425         70 EARKLFRQIAETVRACH--AQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh--~~~i~h~~lk~~nil~~~  104 (114)
                      .+..++.|++.|+.|+|  ..|++||||||+|||++.
T Consensus       158 ~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~  194 (382)
T 2vx3_A          158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN  194 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec
Confidence            99999999999999999  579999999999999954

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.77  E-value=6.8e-19  Score=120.97  Aligned_cols=100  Identities=10%  Similarity=0.056  Sum_probs=79.5

Q ss_pred             CCcEEEEEEecccc--------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          2 AGIVVVLEIMSREA--------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~--------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      .++.+|+|......              ..+|+..+.++ +||||+++..++...+..+++|||+ +++|.+++..    
T Consensus       358 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~----  432 (540)
T 3en9_A          358 LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED----  432 (540)
T ss_dssp             SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT----
T ss_pred             CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH----
Confidence            46778888763221              23577788888 9999995555555666779999999 7999999855    


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCccccc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGH  111 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~~  111 (114)
                          ...++.|++.++.|+|+++++||||||+|||++. ..+++|
T Consensus       433 ----~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-~~kL~D  472 (540)
T 3en9_A          433 ----NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-DLYIID  472 (540)
T ss_dssp             ----CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-SEEECC
T ss_pred             ----HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-eEEEEE
Confidence                4578999999999999999999999999999987 555543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.72  E-value=9.4e-18  Score=107.17  Aligned_cols=90  Identities=18%  Similarity=0.124  Sum_probs=68.2

Q ss_pred             CCcEEEEEEecccc------------------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCH
Q psy14425          2 AGIVVVLEIMSREA------------------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDL   56 (114)
Q Consensus         2 t~~~~avK~~~~~~------------------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l   56 (114)
                      +|+.||+|.+....                        ..+|+..+.++ +|   +++.+++.. +..+++||++ +++|
T Consensus       113 ~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~~---~~v~~~~~~-~~~~lvmE~~~g~~L  187 (282)
T 1zar_A          113 KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QG---LAVPKVYAW-EGNAVLMELIDAKEL  187 (282)
T ss_dssp             TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TT---SSSCCEEEE-ETTEEEEECCCCEEG
T ss_pred             CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-cC---CCcCeEEec-cceEEEEEecCCCcH
Confidence            68899999985321                        23577778877 44   444444433 4569999999 7799


Q ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEe
Q psy14425         57 HSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFC  103 (114)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~  103 (114)
                      .+ +..      .....++.|++.|+.|+|++|++|||+||+|||++
T Consensus       188 ~~-l~~------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~  227 (282)
T 1zar_A          188 YR-VRV------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS  227 (282)
T ss_dssp             GG-CCC------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             HH-cch------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE
Confidence            87 321      23446899999999999999999999999999999

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.65  E-value=2.8e-16  Score=104.87  Aligned_cols=64  Identities=17%  Similarity=0.270  Sum_probs=54.3

Q ss_pred             EEEEEecCCCCCHHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         44 LAYLVFPPCSGDLHSYVRQ-------RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        44 ~~~~v~e~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++++|+.++++|.+++..       ...+++.....++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       179 ~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~  249 (413)
T 3dzo_A          179 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG  249 (413)
T ss_dssp             SEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred             ceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCe
Confidence            4788888889999988841       223677788889999999999999999999999999999977654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.64  E-value=2.1e-16  Score=99.72  Aligned_cols=83  Identities=16%  Similarity=0.173  Sum_probs=59.8

Q ss_pred             hHHHHHhhhCCCCCc--ceEEEEEEcCCEEEEEecCCC--C----CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HC
Q psy14425         18 NLLSAHYRLDSHPHI--NSLHEVLLGDKLAYLVFPPCS--G----DLHSYVRQRKRLKEAEARKLFRQIAETVRACH-AQ   88 (114)
Q Consensus        18 ~e~~~~~~~~~h~~i--~~~~~~~~~~~~~~~v~e~~~--~----~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh-~~   88 (114)
                      .|...+.++ .|+++  +.+++.    +..+++|||++  |    +|.+....   .+......++.|++.++.++| .+
T Consensus       119 ~E~~~l~~l-~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~  190 (258)
T 1zth_A          119 KEFRNLERA-KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA  190 (258)
T ss_dssp             HHHHHHHHH-HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHH-HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC
Confidence            466667766 55543  334432    34689999993  3    66665432   234456788999999999999 99


Q ss_pred             CCccCCCCCCcEEEecCCccc
Q psy14425         89 GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~~~  109 (114)
                      |++|||+||+|||+++ ...+
T Consensus       191 givHrDlkp~NILl~~-~~~l  210 (258)
T 1zth_A          191 ELVHADLSEYNIMYID-KVYF  210 (258)
T ss_dssp             CEECSSCSTTSEEESS-SEEE
T ss_pred             CEEeCCCCHHHEEEcC-cEEE
Confidence            9999999999999987 4444

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.53  E-value=1.1e-14  Score=96.61  Aligned_cols=55  Identities=7%  Similarity=0.188  Sum_probs=44.6

Q ss_pred             EEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         46 YLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        46 ~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++|||+ ++++.++..    .  +....++.|++.++.++|.+|++||||||.|||+++++
T Consensus       187 ~LVME~i~G~~L~~l~~----~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          187 TIVMSLVDALPMRQVSS----V--PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             EEEEECCSCEEGGGCCC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             eEEEEecCCccHhhhcc----c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            6999999 667654321    2  23456789999999999999999999999999997765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.20  E-value=2.5e-10  Score=71.67  Aligned_cols=80  Identities=13%  Similarity=0.093  Sum_probs=59.6

Q ss_pred             CcEEEEEEeccc------cchhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHH
Q psy14425          3 GIVVVLEIMSRE------ASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLF   75 (114)
Q Consensus         3 ~~~~avK~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~   75 (114)
                      |+.+++|.....      ....|...+..+.++..++++++++...+..+++||++ |.++.+...     +......++
T Consensus        37 ~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~  111 (263)
T 3tm0_A           37 NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKII  111 (263)
T ss_dssp             SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHH
T ss_pred             CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHH
Confidence            678999998642      34567887877755778889999998889999999999 667766521     112233567


Q ss_pred             HHHHHHHHHHHH
Q psy14425         76 RQIAETVRACHA   87 (114)
Q Consensus        76 ~~~~~~l~~lh~   87 (114)
                      .++..++..+|+
T Consensus       112 ~~l~~~l~~LH~  123 (263)
T 3tm0_A          112 ELYAECIRLFHS  123 (263)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC
Confidence            888888999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.94  E-value=3.4e-09  Score=66.04  Aligned_cols=77  Identities=13%  Similarity=0.116  Sum_probs=48.9

Q ss_pred             CcEEEEEEeccc---cchhHHHHHhhhCCCC-CcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHHH
Q psy14425          3 GIVVVLEIMSRE---ASGNLLSAHYRLDSHP-HINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQ   77 (114)
Q Consensus         3 ~~~~avK~~~~~---~~~~e~~~~~~~~~h~-~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~   77 (114)
                      |+.+++|.....   ....|...+..+..+. .+++++.+...++..+++||++ |.++.  .   .....   ..+..+
T Consensus        44 g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~---~~~~~---~~~~~~  115 (264)
T 1nd4_A           44 RPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S---SHLAP---AEKVSI  115 (264)
T ss_dssp             SCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T---SCCCH---HHHHHH
T ss_pred             CCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c---CcCCH---hHHHHH
Confidence            567999987653   2346777777664442 3667888888888899999999 65663  1   11111   134455


Q ss_pred             HHHHHHHHHH
Q psy14425         78 IAETVRACHA   87 (114)
Q Consensus        78 ~~~~l~~lh~   87 (114)
                      +...+..+|+
T Consensus       116 l~~~l~~lh~  125 (264)
T 1nd4_A          116 MADAMRRLHT  125 (264)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHhC
Confidence            5555666654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.74  E-value=8.8e-08  Score=62.66  Aligned_cols=83  Identities=12%  Similarity=0.156  Sum_probs=56.4

Q ss_pred             CcEEEEEEec--cc-------cchhHHHHHhhhCC-CCCcceEEEEEEcC---CEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          3 GIVVVLEIMS--RE-------ASGNLLSAHYRLDS-HPHINSLHEVLLGD---KLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         3 ~~~~avK~~~--~~-------~~~~e~~~~~~~~~-h~~i~~~~~~~~~~---~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      +..+++|...  ..       ....|...+..+.. +..+++++..+.+.   +..+++||++ |.++.+.  ....++.
T Consensus        61 ~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~--~~~~l~~  138 (359)
T 3dxp_A           61 GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQ--SLPGMSP  138 (359)
T ss_dssp             SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCT--TCTTCCH
T ss_pred             CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCC--ccccCCH
Confidence            4567888776  22       34457777776633 34678888887765   4588999999 5555331  1123667


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q psy14425         69 AEARKLFRQIAETVRACHA   87 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~   87 (114)
                      .....+..++...+..+|.
T Consensus       139 ~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          139 AERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            7778888999999999997

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.98  E-value=0.00017  Score=45.11  Aligned_cols=57  Identities=7%  Similarity=0.008  Sum_probs=40.6

Q ss_pred             CcEEEEEEecccc---chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHH
Q psy14425          3 GIVVVLEIMSREA---SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSY   59 (114)
Q Consensus         3 ~~~~avK~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~   59 (114)
                      +..+++|......   ...|...+..+..+-.+.+++.+..+.+..+++||++ +.++.+.
T Consensus        50 ~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~  110 (272)
T 4gkh_A           50 APELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV  110 (272)
T ss_dssp             CCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred             CeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence            4567888775432   3456777766655556788899988889999999999 5565543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.82  E-value=0.00012  Score=46.75  Aligned_cols=82  Identities=10%  Similarity=0.098  Sum_probs=44.8

Q ss_pred             cEEEEEEeccc----cchhHHHHHhhhCCCCC--cceEEEEEEcCC---EEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          4 IVVVLEIMSRE----ASGNLLSAHYRLDSHPH--INSLHEVLLGDK---LAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~----~~~~e~~~~~~~~~h~~--i~~~~~~~~~~~---~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      ..+++|.....    ....|...+..+..+..  ++.++......+   ..|++|+++ |.++.....  ..++......
T Consensus        41 ~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~  118 (304)
T 3sg8_A           41 RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQ  118 (304)
T ss_dssp             TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHH
T ss_pred             CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc--ccCCHHHHHH
Confidence            45788886543    23356666666634433  344444433332   347889999 656654221  2245555555


Q ss_pred             HHHHHHHHHHHHHH
Q psy14425         74 LFRQIAETVRACHA   87 (114)
Q Consensus        74 ~~~~~~~~l~~lh~   87 (114)
                      ++.++...+..+|+
T Consensus       119 ~~~~l~~~la~LH~  132 (304)
T 3sg8_A          119 AAKDLARFLSELHS  132 (304)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc
Confidence            56666666655554

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.77  E-value=0.00062  Score=43.68  Aligned_cols=56  Identities=9%  Similarity=-0.056  Sum_probs=34.8

Q ss_pred             CcEEEEEEeccc----cchhHHHHHhhhCCC-C-CcceEEEEEE-cCCEEEEEecCC-CCCHHH
Q psy14425          3 GIVVVLEIMSRE----ASGNLLSAHYRLDSH-P-HINSLHEVLL-GDKLAYLVFPPC-SGDLHS   58 (114)
Q Consensus         3 ~~~~avK~~~~~----~~~~e~~~~~~~~~h-~-~i~~~~~~~~-~~~~~~~v~e~~-~~~l~~   58 (114)
                      |..+++|.....    ....|...+..+..+ + .+.+++.+.. ..+..+++||++ |.++..
T Consensus        39 g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           39 NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            356788886432    233577777776443 2 3556666654 445678999999 555544

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.97  E-value=0.0011  Score=43.06  Aligned_cols=53  Identities=2%  Similarity=-0.064  Sum_probs=33.3

Q ss_pred             CcEEEEEEeccc---------cchhHHHHHhhhCCC--CCcceEEEEEEcC---CEEEEEecCC-CCC
Q psy14425          3 GIVVVLEIMSRE---------ASGNLLSAHYRLDSH--PHINSLHEVLLGD---KLAYLVFPPC-SGD   55 (114)
Q Consensus         3 ~~~~avK~~~~~---------~~~~e~~~~~~~~~h--~~i~~~~~~~~~~---~~~~~v~e~~-~~~   55 (114)
                      |+.+++|.....         ....|...+..+..+  ..+.+++....+.   +..+++||++ |.+
T Consensus        52 ~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~  119 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVV  119 (357)
T ss_dssp             EEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBC
T ss_pred             CceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCC
Confidence            567888887542         234566666655333  3567777776554   3567899999 444

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.14  E-value=0.046  Score=36.07  Aligned_cols=21  Identities=10%  Similarity=0.181  Sum_probs=17.0

Q ss_pred             CCCccCCCCCCcEEEecCCcc
Q psy14425         88 QGIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~~~~  108 (114)
                      ..++|+|+.|.||++++++..
T Consensus       227 ~~L~HGDl~~~Nil~~~~~~~  247 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEHETK  247 (397)
T ss_dssp             CEEECSCCSGGGEEECSSCEE
T ss_pred             CceeeCCCCcCcEEEeCCCeE
Confidence            458999999999999775433

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=94.59  E-value=0.21  Score=31.64  Aligned_cols=17  Identities=12%  Similarity=0.018  Sum_probs=13.7

Q ss_pred             CccCCCCCCcEEEecCC
Q psy14425         90 IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        90 i~h~~lk~~nil~~~~~  106 (114)
                      ++|+|+.|.|++.+++.
T Consensus       175 l~HgDl~~~Nil~~~~~  191 (301)
T 3dxq_A          175 ACHCDPLCENFLDTGER  191 (301)
T ss_dssp             EECSCCCGGGEEECSSC
T ss_pred             eeccCCCcCCEEECCCC
Confidence            79999999999954433

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.45  E-value=0.65  Score=29.94  Aligned_cols=74  Identities=12%  Similarity=0.042  Sum_probs=49.0

Q ss_pred             CcEEEEEEecccc---chhHHHHHhhhCC--CCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHHHH
Q psy14425          3 GIVVVLEIMSREA---SGNLLSAHYRLDS--HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFR   76 (114)
Q Consensus         3 ~~~~avK~~~~~~---~~~e~~~~~~~~~--h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~   76 (114)
                      +..+++|......   ...|...+..+..  ...+++++......+..+++||++ +.++.          .    ....
T Consensus        59 ~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~----------~----~~~~  124 (312)
T 3jr1_A           59 VQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK----------Q----SSFT  124 (312)
T ss_dssp             SCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC----------T----THHH
T ss_pred             CCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC----------c----hhHH
Confidence            5678889876542   3345555554423  356778888887788899999999 44321          1    1345


Q ss_pred             HHHHHHHHHHHCCC
Q psy14425         77 QIAETVRACHAQGI   90 (114)
Q Consensus        77 ~~~~~l~~lh~~~i   90 (114)
                      ++...+.-||..+.
T Consensus       125 ~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          125 IFAEKIAQLHQIQG  138 (312)
T ss_dssp             HHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHcCCC
Confidence            67778888998653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=92.11  E-value=0.25  Score=31.53  Aligned_cols=18  Identities=6%  Similarity=0.093  Sum_probs=15.4

Q ss_pred             CCCccCCCCCCcEEEecC
Q psy14425         88 QGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        88 ~~i~h~~lk~~nil~~~~  105 (114)
                      ..++|+|+.|.|++++.+
T Consensus       222 ~~l~HgD~~~~Nil~~~~  239 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGEN  239 (346)
T ss_dssp             CCEECSSCSTTSEEECGG
T ss_pred             CceecCCCCcccEEEeCC
Confidence            468999999999999643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=90.36  E-value=0.2  Score=33.39  Aligned_cols=21  Identities=19%  Similarity=0.278  Sum_probs=17.5

Q ss_pred             HCCCccCCCCCCcEEEecCCc
Q psy14425         87 AQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        87 ~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ...++|+|+.|.|||+++++.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~~  251 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDST  251 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSCE
T ss_pred             CCeEEecCCCCCcEEEeCCCC
Confidence            456899999999999987653

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=85.70  E-value=0.24  Score=31.14  Aligned_cols=21  Identities=14%  Similarity=0.099  Sum_probs=17.9

Q ss_pred             CCccCCCCCCcEEEecCCccc
Q psy14425         89 GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~~~  109 (114)
                      .++|+|+.+.|++++.++..+
T Consensus       189 ~LvHGDlw~gNvl~~~~g~~~  209 (288)
T 3f7w_A          189 ARIHGDLWNGNVLWQDDGAVV  209 (288)
T ss_dssp             EEECSCCSGGGEEEETTEEEE
T ss_pred             eeeecCCCCCcEEEcCCCeEE
Confidence            479999999999999887654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=81.98  E-value=0.44  Score=31.04  Aligned_cols=20  Identities=15%  Similarity=0.064  Sum_probs=15.7

Q ss_pred             CCccCCCCCCcEEEecCCcc
Q psy14425         89 GIVLRDLKLRKFVFCNAQRS  108 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~~  108 (114)
                      .++|+|+.+.||++++++..
T Consensus       213 ~l~HgDl~~~Nil~~~~~~~  232 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKCLR  232 (369)
T ss_dssp             EEECSCCCGGGEEECC-CEE
T ss_pred             EEEeCCCCcccEEecCCcEE
Confidence            47999999999999765533

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=81.86  E-value=0.42  Score=30.37  Aligned_cols=18  Identities=22%  Similarity=0.410  Sum_probs=15.8

Q ss_pred             CCccCCCCCCcEEEecCC
Q psy14425         89 GIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~  106 (114)
                      +++|+|+.|.|+++++++
T Consensus       188 ~liHgDl~~~Nil~~~~~  205 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDE  205 (322)
T ss_dssp             EEECSCCCGGGEEEETTE
T ss_pred             ccCCCCCCccCEEEeCCc
Confidence            589999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	114
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-13
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-12
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-10
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-09
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-09
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-08
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-08
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-07
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-04

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 64.3 bits (156), Expect = 3e-14
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 13  REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
           REA+   +    ++  HP+I  L +    +   +LVF     G+L  Y+ ++  L E E 
Sbjct: 53  REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 112

Query: 72  RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN 104
           RK+ R + E + A H   IV RDLK    +  +
Sbjct: 113 RKIMRALLEVICALHKLNIVHRDLKPENILLDD 145

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 4e-14
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 4   IVVVLEIMSREASGNLLSAHYRLDSHPHINSLHEVL----LGDKLAYLVFPPCS-GDLHS 58
              +  +     +   +  H+R    PHI  + +V      G K   +V      G+L S
Sbjct: 39  KFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFS 98

Query: 59  YVRQR--KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN 104
            ++ R  +   E EA ++ + I E ++  H+  I  RD+K    ++ +
Sbjct: 99  RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 146

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 61.2 bits (148), Expect = 6e-13
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYV-RQRKRLKEAEARKLFRQIAETVRAC 85
            HP + +LH+    D    +++   S G+L   V  +  ++ E EA +  RQ+ + +   
Sbjct: 81  RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 140

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H    V  DLK    +F  
Sbjct: 141 HENNYVHLDLKPENIMFTT 159

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 7e-13
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLH-SYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +H ++   +       + YL    CSG      +     + E +A++ F Q+   V   H
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120

Query: 87  AQGIVLRDLKLRKFVFCN 104
             GI  RD+K    +   
Sbjct: 121 GIGITHRDIKPENLLLDE 138

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 1e-12
 Identities = 12/77 (15%), Positives = 31/77 (40%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
            +P+I +  +  L     ++V    +G   + V     + E +   + R+  + +   H+
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS 134

Query: 88  QGIVLRDLKLRKFVFCN 104
             ++ RD+K    +   
Sbjct: 135 NQVIHRDIKSDNILLGM 151

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 2e-12
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I  L+         YL+      G ++  +++  +  E        ++A  +  CH
Sbjct: 64  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 123

Query: 87  AQGIVLRDLKLRKFVFCN 104
           ++ ++ RD+K    +  +
Sbjct: 124 SKRVIHRDIKPENLLLGS 141

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 2e-12
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP    L+     D+  Y        G+L  Y+R+     E   R    +I   +   H
Sbjct: 66  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 125

Query: 87  AQGIVLRDLKLRKFVFCN 104
            +GI+ RDLK    +   
Sbjct: 126 GKGIIHRDLKPENILLNE 143

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.2 bits (143), Expect = 2e-12
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+        L +  A+LV   C G         +K L+E E   +     + +   H
Sbjct: 73  RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132

Query: 87  AQGIVLRDLKLRKFVFCN 104
           +  ++ RD+K    +   
Sbjct: 133 SHNMIHRDVKAGNILLSE 150

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 59.3 bits (143), Expect = 2e-12
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRK-RLKEAEARKLFRQIAETVRAC 85
            HP + +LH+         L+    S G+L   +     ++ EAE     RQ  E ++  
Sbjct: 84  HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 143

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H   IV  D+K    +   
Sbjct: 144 HEHSIVHLDIKPENIMCET 162

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 7e-12
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYV--RQRKRLKEAEARKLFRQIAETVRAC 85
            HP+I  L +    +   +++   C+G     V     + L E++ + + +Q  + +   
Sbjct: 67  DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 126

Query: 86  HAQGIVLRDLKLRKFVF 102
           H   I+ RDLK    +F
Sbjct: 127 HDNKIIHRDLKAGNILF 143

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.2 bits (140), Expect = 7e-12
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 29  HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
            P I  +            +    +G DLH ++ Q     EA+ R    +I   +   H 
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 125

Query: 88  QGIVLRDLKLRKFVF 102
           + +V RDLK    + 
Sbjct: 126 RFVVYRDLKPANILL 140

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 1e-11
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 10/111 (9%)

Query: 3   GIVVVLEIMSREASGNL-------LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-G 54
           G+V+  +++  E    +       L   +  +  P+I   +     D    +       G
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGG 89

Query: 55  DLHSYVRQRKRLKEAEARKLFRQIAETVRACH-AQGIVLRDLKLRKFVFCN 104
            L   +++  R+ E    K+   + + +        I+ RD+K    +  +
Sbjct: 90  SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 5e-11
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
               HP +  +       +  + V    + GDL  +++   +   + A     +I   ++
Sbjct: 58  LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 117

Query: 84  ACHAQGIVLRDLK 96
             H++GIV RDLK
Sbjct: 118 FLHSKGIVYRDLK 130

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 54.7 bits (131), Expect = 9e-11
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 28  SHPHINSLHEVLLGD----KLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETV 82
           +HP I ++++    +     L Y+V     G  L   V     +    A ++     + +
Sbjct: 65  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 124

Query: 83  RACHAQGIVLRDLKLRKFVFCN 104
              H  GI+ RD+K    +   
Sbjct: 125 NFSHQNGIIHRDVKPANIMISA 146

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 1e-10
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRK-RLKEAEARKLFRQIAETVRAC 85
            H +I  LHE     +   ++F   SG D+   +      L E E      Q+ E ++  
Sbjct: 59  RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H+  I   D++    ++  
Sbjct: 119 HSHNIGHFDIRPENIIYQT 137

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 2e-10
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            +P+I  +  +   +    LV      G L+ Y++Q + +K+    +L  Q++  ++   
Sbjct: 66  DNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 124

Query: 87  AQGIVLRDLKLRKFVFCN 104
               V RDL  R  +   
Sbjct: 125 ESNFVHRDLAARNVLLVT 142

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 3e-10
 Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 3   GIVVVLEIMSREASGNLL---SAHYRLDSHPHINSLHEVLL--GDKLAYLVFPPCSGDLH 57
              VV++I+       +         L   P+I +L +++     +   LVF   +    
Sbjct: 60  NEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT-- 117

Query: 58  SYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
            + +  + L + + R    +I + +  CH+ GI+ RD+K    +  +  R +
Sbjct: 118 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 169

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.1 bits (127), Expect = 4e-10
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP+I +L ++       YL+    S G+L   + ++    E +A +L  Q+ + V+  H
Sbjct: 65  KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 124

Query: 87  AQGIVLRDLKLRKFVFCN 104
             GIV RDLK    ++ +
Sbjct: 125 DLGIVHRDLKPENLLYYS 142

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.5 bits (125), Expect = 7e-10
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLL-GDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           + P +  L         L  ++     G++ S++R+  R  E  AR    QI  T    H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158

Query: 87  AQGIVLRDLKLRKFVFCN 104
           +  ++ RDLK    +   
Sbjct: 159 SLDLIYRDLKPENLLIDQ 176

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 8e-10
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVR-QRKRLKEAEARKLFRQIAETVRAC 85
            H +I          +L  +V   C    L+ ++     + +  +   + RQ A+ +   
Sbjct: 62  RHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120

Query: 86  HAQGIVLRDLK 96
           HA+ I+ RDLK
Sbjct: 121 HAKSIIHRDLK 131

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 8e-10
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGD-LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP++ +LHEV        L+    +G  L  ++ +++ L E EA +  +QI   V   H
Sbjct: 71  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130

Query: 87  AQGIVLRDLKLRKFVFCNAQRSVGH 111
           +  I   DLK    +  +       
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPR 155

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-09
 Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 10/86 (11%)

Query: 28  SHPHINSLHEVLL------GDKLAYLVFPPCSGD----LHSYVRQRKRLKEAEARKLFRQ 77
            H +I  L            +    LV              Y R ++ L     +    Q
Sbjct: 71  DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130

Query: 78  IAETVRACHAQGIVLRDLKLRKFVFC 103
           +  ++   H+ GI  RD+K +  +  
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLD 156

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-09
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVR-QRKRLKEAEARKLFRQIAETVRAC 85
            +P+I  L  V   + L  LV      G LH ++  +R+ +  +   +L  Q++  ++  
Sbjct: 67  DNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 125

Query: 86  HAQGIVLRDLKLRKFVFCN 104
             +  V RDL  R  +  N
Sbjct: 126 EEKNFVHRDLAARNVLLVN 144

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 1e-09
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 24/104 (23%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR------------------ 65
           +L SH +I +L          YL+F  C  GDL +Y+R ++                   
Sbjct: 96  QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155

Query: 66  -----LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN 104
                L   +      Q+A+ +     +  V RDL  R  +  +
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH 199

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 1e-09
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 29  HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
              +  L +         L+   P    DL  ++ +R  L+E  AR  F Q+ E VR CH
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127

Query: 87  AQGIVLRDLKLRKFVF 102
             G++ RD+K    + 
Sbjct: 128 NCGVLHRDIKDENILI 143

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 19/99 (19%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRK------------------R 65
            L +H +I +L           ++   C  GDL +++R+++                   
Sbjct: 82  YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141

Query: 66  LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN 104
           L   +      Q+A+ +    ++  + RDL  R  +  +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 3e-09
 Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDL---HSYVRQRKRLKEAEARKLFRQIAETVRA 84
            H  +  L+ V+  + + Y++                   +L   +   +  QIAE +  
Sbjct: 66  QHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124

Query: 85  CHAQGIVLRDLKLRKFVFCN 104
              +  + RDL+    +  +
Sbjct: 125 IEERNYIHRDLRAANILVSD 144

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 3e-09
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 28  SHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
            H +I  +++++        K  YLV      DL+  ++  + L          QI   +
Sbjct: 64  RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK-TQHLSNDHICYFLYQILRGL 122

Query: 83  RACHAQGIVLRDLKLRKFVFCN 104
           +  H+  ++ RDLK    +   
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNT 144

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-09
 Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGD-LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           SHP+I  L +         LVF     D           L  +  +       + +   H
Sbjct: 58  SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 117

Query: 87  AQGIVLRDLK 96
              I+ RDLK
Sbjct: 118 QHWILHRDLK 127

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-09
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGD-LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            HP + +L            V    +G  L  ++ + +   E  AR    +I   +   H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122

Query: 87  AQGIVLRDLKLRKFVFCN 104
           ++ +V RD+KL   +   
Sbjct: 123 SRDVVYRDIKLENLMLDK 140

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 5e-09
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 28  SHPHINSLHEVLLGDKLA------YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
            H ++  L +V   D+        YLV P   G     + + ++L E   + L  Q+ + 
Sbjct: 75  RHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKG 133

Query: 82  VRACHAQGIVLRDLKLRKFVFCN 104
           +R  HA GI+ RDLK        
Sbjct: 134 LRYIHAAGIIHRDLKPGNLAVNE 156

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 5e-09
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 28  SHPHINSLHEVLLGDK-LAYLVFPPCS-GDLHSYVRQRKR--LKEAEARKLFRQIAETVR 83
            H ++  L  V++ +K   Y+V    + G L  Y+R R R  L      K    + E + 
Sbjct: 58  RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 117

Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
                  V RDL  R  +   
Sbjct: 118 YLEGNNFVHRDLAARNVLVSE 138

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 49.8 bits (118), Expect = 6e-09
 Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 5/117 (4%)

Query: 3   GIVVVLEIMSREASGNLLSAHYR----LDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHS 58
              V ++   R +    L   YR    L     I +++          LV       L  
Sbjct: 30  NQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLED 89

Query: 59  YVRQRKR-LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHELK 114
            +    R           +Q+   V++ H + +V RD+K   F+         + + 
Sbjct: 90  LLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIY 146

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 1e-08
 Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVR-QRKRLKEAEARKLFRQIAETVRAC 85
           SH  +  L+ V    +  +++    + G L +Y+R  R R +  +  ++ + + E +   
Sbjct: 57  SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 116

Query: 86  HAQGIVLRDLKLR 98
            ++  + RDL  R
Sbjct: 117 ESKQFLHRDLAAR 129

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 1e-08
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)

Query: 28  SHPHINSLHEVLL----GDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETV 82
            HP+I   ++       G K   LV    + G L +Y+++ K +K    R   RQI + +
Sbjct: 66  QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGL 125

Query: 83  RACHAQG--IVLRDLK 96
           +  H +   I+ RDLK
Sbjct: 126 QFLHTRTPPIIHRDLK 141

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.7 bits (115), Expect = 1e-08
 Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 1/81 (1%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVR 83
            +     I ++           +V       L        R         L  Q+   + 
Sbjct: 58  MMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIE 117

Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
             H++  + RD+K   F+   
Sbjct: 118 YIHSKNFIHRDVKPDNFLMGL 138

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 48.3 bits (114), Expect = 2e-08
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            H +I  L++V+   K   LVF                 L+   A+    Q+   +  CH
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117

Query: 87  AQGIVLRDLKLRKFVFCN 104
            + ++ RDLK +  +   
Sbjct: 118 DRRVLHRDLKPQNLLINR 135

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.8 bits (113), Expect = 3e-08
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGD-LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
           +HP I  +       +  +++     G  L S +R+ +R     A+    ++   +   H
Sbjct: 62  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 121

Query: 87  AQGIVLRDLK 96
           ++ I+ RDLK
Sbjct: 122 SKDIIYRDLK 131

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 6e-08
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARKLFRQIAETVRACH 86
            HPHI  L  V+  + +  ++     G+L S+++ R   L  A       Q++  +    
Sbjct: 66  DHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125

Query: 87  AQGIVLRDLKLR 98
           ++  V RD+  R
Sbjct: 126 SKRFVHRDIAAR 137

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 6e-08
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 25  RLDSHPHINSLHEVLL-GDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
            +   P + +LH       KL  ++     G+L +++ QR+R  E E +    +I   + 
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 84  ACHAQGIVLRDLKLRKFVFCN 104
             H  GI+ RD+KL   +  +
Sbjct: 144 HLHKLGIIYRDIKLENILLDS 164

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 8e-08
 Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 17/97 (17%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQR----------------KRLK 67
           +L  HP+I +L          YL       G+L  ++R+                   L 
Sbjct: 66  KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125

Query: 68  EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCN 104
             +       +A  +     +  + RDL  R  +   
Sbjct: 126 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 162

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 1e-07
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 12/82 (14%)

Query: 28  SHPHINSLHEVLLG--DKLAYLVFPPCS-GDLHSYV----RQRKRLKEAEARKLFRQIAE 80
            HP+I   ++ ++   +   Y+V   C  GDL S +    ++R+ L E    ++  Q+  
Sbjct: 61  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 81  TVRACHAQG-----IVLRDLKL 97
            ++ CH +      ++ RDLK 
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKP 142

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (108), Expect = 1e-07
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQR-KRLKEAEARKLFRQIAETVRAC 85
            HP++  L  V+       ++      G L S++RQ   +    +   + R IA  ++  
Sbjct: 85  DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 144

Query: 86  HAQGIVLRDLKLRKFVFCN 104
                V RDL  R  +  +
Sbjct: 145 ADMNYVHRDLAARNILVNS 163

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-07
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 3/79 (3%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGD--LHSYVRQRKRLKEAEARKLFRQIAETVRAC 85
            H ++  L+ V+L   +  +V         L    + +         +   Q+AE +   
Sbjct: 69  DHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127

Query: 86  HAQGIVLRDLKLRKFVFCN 104
            ++  + RDL  R  +   
Sbjct: 128 ESKRFIHRDLAARNLLLAT 146

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 2e-07
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 28  SHPHINSLHEVL-----LGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
            H ++  L +V      L +     +     G   + + + ++L +   + L  QI   +
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134

Query: 83  RACHAQGIVLRDLKLRKFVFCN 104
           +  H+  I+ RDLK        
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNE 156

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 2e-07
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 17/91 (18%)

Query: 25  RLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRK----------------RLK 67
            +  H +I +L      D   Y++    S G+L  Y++ R+                +L 
Sbjct: 74  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

Query: 68  EAEARKLFRQIAETVRACHAQGIVLRDLKLR 98
             +      Q+A  +    ++  + RDL  R
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAAR 164

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 3e-07
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSG---DLHSYVRQRKRLKEAEARKLFRQIAETVRA 84
            H  +  L+ V+  + + Y+V    S             K L+  +   +  QIA  +  
Sbjct: 70  RHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 128

Query: 85  CHAQGIVLRDLK 96
                 V RDL+
Sbjct: 129 VERMNYVHRDLR 140

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (104), Expect = 5e-07
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYV---RQRKRLKEAEARKLFRQIAETVRA 84
            HP++  L  V   +   Y++    +            R+ +       +  QI+  +  
Sbjct: 71  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130

Query: 85  CHAQGIVLRDLK 96
              +  + RDL 
Sbjct: 131 LEKKNFIHRDLA 142

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 6e-07
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLK-EAEARKLFRQIAETVRACH 86
            +PH+  L  + L   +  +      G L  YVR+ K             QIA+ +    
Sbjct: 69  DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128

Query: 87  AQGIVLRDLKLRKFVFCN 104
            + +V RDL  R  +   
Sbjct: 129 DRRLVHRDLAARNVLVKT 146

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 9e-07
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 29  HPHINSLHEVLL-----GDKLAYLVFPPCSGDLHSYV--RQRKRLKEAEARKLFRQIAET 81
           HP++  L +V        +    LVF     DL +Y+       +     + +  Q+   
Sbjct: 69  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128

Query: 82  VRACHAQGIVLRDLKLRKFVFCN 104
           +   H+  +V RDLK +  +  +
Sbjct: 129 LDFLHSHRVVHRDLKPQNILVTS 151

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 1e-06
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
            H +I  LH+VL  DK   LVF  C       +      L     +    Q+ + +  CH
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118

Query: 87  AQGIVLRDLKLRKFVFCN 104
           ++ ++ RDLK +  +   
Sbjct: 119 SRNVLHRDLKPQNLLINR 136

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLK-EAEARKLFRQIAETVRAC 85
           SHP +  L+ V L      LVF     G L  Y+R ++ L        +   + E +   
Sbjct: 58  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117

Query: 86  HAQGIVLRDLKLR 98
               ++ RDL  R
Sbjct: 118 EEACVIHRDLAAR 130

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 2e-06
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
           +HP+I  L +V+  +   YLVF     DL  ++       +     +    Q+ + +  C
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118

Query: 86  HAQGIVLRDLKLRKFVFCN 104
           H+  ++ RDLK +  +   
Sbjct: 119 HSHRVLHRDLKPQNLLINT 137

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 5e-06
 Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR--LKEAEARKLFRQIAETVRAC 85
           SH +I  L  V+   K   ++             + K       +   + R IA  ++  
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 86  HAQGIVLRDLKLRKFVFCN 104
                V RDL  R  +  +
Sbjct: 127 ANMNYVHRDLAARNILVNS 145

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 9e-06
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 28  SHPHINSLHEV--------LLGDKLAYLVFPPCSGDLH-SYVRQRKRLKEAEARKLFRQI 78
            H ++ +L E+               YLVF  C  DL         +   +E +++ + +
Sbjct: 67  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 126

Query: 79  AETVRACHAQGIVLRDLKLRKFVF 102
              +   H   I+ RD+K    + 
Sbjct: 127 LNGLYYIHRNKILHRDMKAANVLI 150

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-05
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 28  SHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKR----------LKEAEARKLFR 76
           +  H+  L  V+   +   ++    + GDL SY+R  +              ++  ++  
Sbjct: 81  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 140

Query: 77  QIAETVRACHAQGIVLRDLKLRKFVFCN 104
           +IA+ +   +A   V RDL  R  +   
Sbjct: 141 EIADGMAYLNANKFVHRDLAARNCMVAE 168

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 3e-05
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 8/83 (9%)

Query: 28  SHPHINSLHEVLLGDKLA------YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
           +H +I SL  V    K        YLV      +L   ++            L  Q+   
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL--DHERMSYLLYQMLCG 131

Query: 82  VRACHAQGIVLRDLKLRKFVFCN 104
           ++  H+ GI+ RDLK    V  +
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKS 154

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 31/133 (23%)

Query: 3   GIVVVLEIMSREASGNLLSAHYR------LDSHPHINSLHEVLLGDKLAYLVFPPCS-GD 55
             +V ++++  EAS ++ +   R         +P+I  L  V    K   L+F   + GD
Sbjct: 43  FTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGD 102

Query: 56  LHSYVRQRKR------------------------LKEAEARKLFRQIAETVRACHAQGIV 91
           L+ ++R                            L  AE   + RQ+A  +     +  V
Sbjct: 103 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV 162

Query: 92  LRDLKLRKFVFCN 104
            RDL  R  +   
Sbjct: 163 HRDLATRNCLVGE 175

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 1e-04
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 28  SHPHINSLHEVLL-GDKLAYLVFPPCS-GDLHSYVR-QRKRLKEAEARKLFRQIAETVRA 84
           SHP++ SL  + L  +    +V P    GDL +++R +       +      Q+A+ ++ 
Sbjct: 86  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 145

Query: 85  CHAQGIVLRDLKLRKFVFCN 104
             ++  V RDL  R  +   
Sbjct: 146 LASKKFVHRDLAARNCMLDE 165

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 18/82 (21%), Positives = 24/82 (29%), Gaps = 14/82 (17%)

Query: 28  SHPHINSLHEVLLGDKLA----YLVFPPCS-GDLHSYVRQRKRLKEAEARKLFRQIAETV 82
            H +I         D       +LV      G L  Y+  R  +      KL    A  +
Sbjct: 55  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGL 113

Query: 83  RACHAQ--------GIVLRDLK 96
              H +         I  RDLK
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLK 135

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 1e-04
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 18/92 (19%)

Query: 25  RLDSHPHINSLHEVLL--GDKLAYLVFPPCSGDLHSYVRQRKR----------------L 66
            +  H ++ +L       G  L  +V     G+L +Y+R ++                 L
Sbjct: 72  HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131

Query: 67  KEAEARKLFRQIAETVRACHAQGIVLRDLKLR 98
                     Q+A+ +    ++  + RDL  R
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	114
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.96
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.96
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.96
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.96
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.95
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.95
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.95
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.95
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.94
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.94
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.94
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.93
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.93
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.93
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.92
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.92
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.92
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.92
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.91
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.9
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.9
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.9
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.9
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.9
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.89
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.89
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.89
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.88
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.73
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.71
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.83
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.83
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.32
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	89.86
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	87.18
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	81.87

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.6e-30  Score=161.10  Aligned_cols=108  Identities=19%  Similarity=0.324  Sum_probs=95.4

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      ||+.||+|.++...       ..+|+.++.++ +||||+++++++.+++.++++|||+ +|+|.+++...+.+++..+..
T Consensus        29 ~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~  107 (271)
T d1nvra_          29 TEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR  107 (271)
T ss_dssp             TCCEEEEEEEECC-------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHH
T ss_pred             CCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHH
Confidence            68999999986442       23578888877 9999999999999999999999999 889999998777899999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      ++.|++.|+.|||++|++||||||+|||++.++ .+++
T Consensus       108 i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~  145 (271)
T d1nvra_         108 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS  145 (271)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             HHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEc
Confidence            999999999999999999999999999997654 3443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.6e-29  Score=157.14  Aligned_cols=104  Identities=16%  Similarity=0.350  Sum_probs=93.5

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|.+.+..         ..+|+.++.++ +||||+++++++.+++.++++|||+ +|+|.+++...+.+++..+
T Consensus        30 ~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~  108 (263)
T d2j4za1          30 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT  108 (263)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHH
T ss_pred             CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHH
Confidence            68999999985432         22467777777 9999999999999999999999999 8999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++
T Consensus       109 ~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~  143 (263)
T d2j4za1         109 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAG  143 (263)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC
Confidence            99999999999999999999999999999997754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-28  Score=156.73  Aligned_cols=104  Identities=16%  Similarity=0.222  Sum_probs=92.6

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      ||+.||+|.+....      ..+|+.++.++ +||||++++++|.+++.+|++|||+ +|+|.+++.. +.+++..+..+
T Consensus        44 ~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i  121 (293)
T d1yhwa1          44 TGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  121 (293)
T ss_dssp             TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHH
T ss_pred             CCCEEEEEEEecccChHHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHH
Confidence            68999999986443      23578888877 9999999999999999999999999 8999998765 56999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|||++|++||||||+|||++.++.
T Consensus       122 ~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~  154 (293)
T d1yhwa1         122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGS  154 (293)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHCCCcccCCcHHHeEECCCCc
Confidence            999999999999999999999999999976643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.6e-28  Score=156.06  Aligned_cols=102  Identities=24%  Similarity=0.434  Sum_probs=92.3

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      ||+.||||.+....       ..+|+.++.++ +||||++++++|.+++.+|++|||+ +|+|.+++...+.+++..+..
T Consensus        33 ~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~  111 (307)
T d1a06a_          33 TQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR  111 (307)
T ss_dssp             TCCEEEEEEEEC----------CHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHH
T ss_pred             CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHH
Confidence            78999999986543       23588888888 9999999999999999999999999 899999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|++.|+.|||++|++||||||+||++..
T Consensus       112 ~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~  142 (307)
T d1a06a_         112 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS  142 (307)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred             HHHHHHHHHHhhhhceeeeEEecccceeecc
Confidence            9999999999999999999999999999953

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=1.8e-28  Score=154.94  Aligned_cols=106  Identities=25%  Similarity=0.400  Sum_probs=95.1

Q ss_pred             CCcEEEEEEecccc---------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCC
Q psy14425          2 AGIVVVLEIMSREA---------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKR   65 (114)
Q Consensus         2 t~~~~avK~~~~~~---------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~   65 (114)
                      ||+.||||.+++..               ..+|+.++.++..||||++++++|.+++.+|++|||+ +|+|.+++..++.
T Consensus        27 ~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~  106 (277)
T d1phka_          27 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT  106 (277)
T ss_dssp             TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS
T ss_pred             CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCC
Confidence            68999999986542               2247778888856999999999999999999999999 8899999988888


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +++..+..++.|++.|+.|||++|++||||||+||+++.++.
T Consensus       107 l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~  148 (277)
T d1phka_         107 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN  148 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCC
Confidence            999999999999999999999999999999999999976543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-28  Score=156.61  Aligned_cols=105  Identities=21%  Similarity=0.321  Sum_probs=94.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||||.+++..         ..+|+.++.++ +||||++++++|.+.+.+|++|||+ +|+|.+++...+.+++..+
T Consensus        32 ~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~  110 (288)
T d1uu3a_          32 TSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT  110 (288)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHH
T ss_pred             CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHH
Confidence            68999999986432         22477788877 9999999999999999999999999 8899999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       111 ~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~  146 (288)
T d1uu3a_         111 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH  146 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHhhccccEEcCcCCccccccCCCce
Confidence            999999999999999999999999999999977653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-28  Score=155.25  Aligned_cols=104  Identities=22%  Similarity=0.369  Sum_probs=94.2

Q ss_pred             CCcEEEEEEecccc------------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA------------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~------------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||||.+++..            ..+|+.++.++ +||||++++++|.+.+.++++|||+ +|+|.+++...+.+++
T Consensus        34 ~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~  112 (293)
T d1jksa_          34 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE  112 (293)
T ss_dssp             TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccch
Confidence            78999999985432            23478888888 9999999999999999999999999 8999999988788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      ..+..++.|++.|+.|||+++++||||||+||+++..+
T Consensus       113 ~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~  150 (293)
T d1jksa_         113 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN  150 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred             hHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCC
Confidence            99999999999999999999999999999999997665

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-28  Score=156.85  Aligned_cols=104  Identities=15%  Similarity=0.205  Sum_probs=93.3

Q ss_pred             CCcEEEEEEeccccch-----hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC-CCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREASG-----NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK-RLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-----~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~-~~~~~~~~~~   74 (114)
                      ||+.||+|.++.....     +|+.++.++ +||||++++++|++++.+|+||||+ +++|.+++...+ .+++..+..+
T Consensus        29 ~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i  107 (321)
T d1tkia_          29 SKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY  107 (321)
T ss_dssp             TTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHH
T ss_pred             CCcEEEEEEEcCCcccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHH
Confidence            7899999999765432     577778777 9999999999999999999999999 889999997654 6999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +.|++.|+.|||++|++||||||+|||++.++
T Consensus       108 ~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~  139 (321)
T d1tkia_         108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRR  139 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred             HHHHHHHHHHHHHcCCCcccccccceeecCCC
Confidence            99999999999999999999999999997543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-28  Score=154.32  Aligned_cols=105  Identities=15%  Similarity=0.304  Sum_probs=93.4

Q ss_pred             CCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      ||+.||+|.++...      ..+|+.++.++ +||||++++++|.+++.+++||||+ +|+|.+++.. .+.+++..+..
T Consensus        36 ~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~  114 (288)
T d2jfla1          36 TSVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV  114 (288)
T ss_dssp             TCCEEEEEEEECSSSGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHH
T ss_pred             CCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHH
Confidence            68999999986542      23588888888 9999999999999999999999999 8999998754 45699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       115 i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~  148 (288)
T d2jfla1         115 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD  148 (288)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHCCEEEeecChhheeECCCCC
Confidence            9999999999999999999999999999976653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.9e-29  Score=159.12  Aligned_cols=108  Identities=15%  Similarity=0.181  Sum_probs=94.1

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~   73 (114)
                      ||+.||+|.++.+..       .+|+.++.++ +||||++++++|.+.+.+++||||+ +|+|.+++.+.+.+++..+..
T Consensus        30 ~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~  108 (322)
T d1s9ja_          30 SGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK  108 (322)
T ss_dssp             TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHH
T ss_pred             CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHH
Confidence            689999999865422       2467777777 9999999999999999999999999 889999998878899999999


Q ss_pred             HHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC-cccc
Q psy14425         74 LFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        74 ~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      ++.|++.|+.|+|+ +|++||||||+|||++.++ .+++
T Consensus       109 ~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~  147 (322)
T d1s9ja_         109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC  147 (322)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEEC
T ss_pred             HHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEe
Confidence            99999999999997 5999999999999997654 3443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=3.3e-28  Score=155.71  Aligned_cols=105  Identities=19%  Similarity=0.252  Sum_probs=92.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||||.+....         ..+|+.++.++ +||||++++++|.+++.++++|||+ +|++..+....+.+++..+
T Consensus        39 ~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~  117 (309)
T d1u5ra_          39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI  117 (309)
T ss_dssp             TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHH
T ss_pred             CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHH
Confidence            68999999986543         22477788888 9999999999999999999999999 7777777667778999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       118 ~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~  153 (309)
T d1u5ra_         118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL  153 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTE
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCC
Confidence            999999999999999999999999999999987653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-28  Score=157.35  Aligned_cols=108  Identities=18%  Similarity=0.283  Sum_probs=95.6

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||+|+++++.         ..+|+.++.++ +||||++++++|++.+.+++||||+ +|+|.+++...+.+++..+
T Consensus        29 ~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~  107 (337)
T d1o6la_          29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA  107 (337)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHH
T ss_pred             CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHH
Confidence            78999999996542         22467777777 9999999999999999999999999 8999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      +.++.|++.|+.|+|++|++||||||+|||++.++. +++
T Consensus       108 ~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~  147 (337)
T d1o6la_         108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKIT  147 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred             HHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEe
Confidence            999999999999999999999999999999977653 443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.95  E-value=9.6e-28  Score=155.88  Aligned_cols=103  Identities=23%  Similarity=0.334  Sum_probs=91.6

Q ss_pred             CCCcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          1 MAGIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         1 ~t~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      .||+.||+|.++...      ..+|+.++.++ +||||++++++|.+++.++++|||+ +|+|.+.+... ..+++..+.
T Consensus        52 ~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~  130 (352)
T d1koba_          52 ATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI  130 (352)
T ss_dssp             TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHH
T ss_pred             CCCCEEEEEEECCcchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHH
Confidence            378999999986553      23478888887 9999999999999999999999999 89999887654 469999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      .++.|++.|+.|||++|++||||||+|||++.
T Consensus       131 ~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~  162 (352)
T d1koba_         131 NYMRQACEGLKHMHEHSIVHLDIKPENIMCET  162 (352)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHCCeeecccccccccccc
Confidence            99999999999999999999999999999963

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.95  E-value=1.5e-27  Score=154.80  Aligned_cols=102  Identities=21%  Similarity=0.337  Sum_probs=91.7

Q ss_pred             CCcEEEEEEeccccc------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~~------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      ||+.||||.+.....      .+|+.++.++ +||||++++++|.+++.++++|||+ +|+|.+++.. .+.+++..+..
T Consensus        50 ~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~  128 (350)
T d1koaa2          50 TGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE  128 (350)
T ss_dssp             TTEEEEEEEECCCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHH
T ss_pred             CCCEEEEEEEcccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHH
Confidence            689999999965432      2478888888 9999999999999999999999999 8999998854 45799999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      ++.|++.|+.|||++|++||||||+|||++.
T Consensus       129 i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~  159 (350)
T d1koaa2         129 YMRQVCKGLCHMHENNYVHLDLKPENIMFTT  159 (350)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHhcCCeeeeechhHeeecc
Confidence            9999999999999999999999999999964

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.4e-27  Score=153.20  Aligned_cols=105  Identities=16%  Similarity=0.311  Sum_probs=93.7

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||||+++++.         ..+|+.++.++ +||||++++++|.+++.++++|||+ ++++..++.....++...+
T Consensus        28 ~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~  106 (316)
T d1fota_          28 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA  106 (316)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHH
T ss_pred             CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHH
Confidence            68999999986432         22467777777 9999999999999999999999999 8899999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       107 ~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~  142 (316)
T d1fota_         107 KFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH  142 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHhhhhhccCcEEccccCchheeEcCCCC
Confidence            999999999999999999999999999999977653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.2e-27  Score=151.74  Aligned_cols=108  Identities=16%  Similarity=0.235  Sum_probs=93.9

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      ||+.||||.++.+.     ..+|+.++.++ +||||++++++|.+++.++++|||+ +|++.+++...  ..+++..+..
T Consensus        41 ~~~~vAvK~i~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~  119 (287)
T d1opja_          41 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY  119 (287)
T ss_dssp             GTEEEEEEECCTTCSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHH
T ss_pred             CCeEEEEEEECCccchHHHHHHHHHHHHhC-CCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHH
Confidence            58899999986543     23578888888 9999999999999999999999999 89999998653  4689999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      ++.|++.|+.|||++|++||||||+|||++.++. +++
T Consensus       120 i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~  157 (287)
T d1opja_         120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA  157 (287)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             HHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEc
Confidence            9999999999999999999999999999976543 443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-27  Score=152.08  Aligned_cols=107  Identities=16%  Similarity=0.205  Sum_probs=93.2

Q ss_pred             CCCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      .||+.||||.++++..         ..|...+.+..+||||++++++|.+++.+|+||||+ +|+|.+++...+.+++..
T Consensus        25 ~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~  104 (320)
T d1xjda_          25 KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSR  104 (320)
T ss_dssp             TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHH
T ss_pred             CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHH
Confidence            3789999999965321         124445555559999999999999999999999999 899999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|||+++++|||+||+|||++..+.
T Consensus       105 ~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~  141 (320)
T d1xjda_         105 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH  141 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCc
Confidence            9999999999999999999999999999999977553

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.6e-28  Score=155.02  Aligned_cols=104  Identities=22%  Similarity=0.387  Sum_probs=91.6

Q ss_pred             CCcEEEEEEeccc-cchhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSRE-ASGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~-~~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      ||+.||||+++.. ...+|+.++.++.+||||++++++|++    .+.+|++|||| +|+|.+++...  ..+++..+..
T Consensus        36 ~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~  115 (335)
T d2ozaa1          36 TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE  115 (335)
T ss_dssp             TCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHH
T ss_pred             CCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHH
Confidence            7899999999654 355688887777799999999999975    46799999999 88999999764  3699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecC
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~  105 (114)
                      ++.|++.|+.|||++|++||||||+|||++..
T Consensus       116 i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~  147 (335)
T d2ozaa1         116 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSK  147 (335)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEESCS
T ss_pred             HHHHHHHHHHHHHHcCCccccccccccccccc
Confidence            99999999999999999999999999999753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.8e-27  Score=148.94  Aligned_cols=102  Identities=24%  Similarity=0.257  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc----CCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG----DKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~----~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|.+....        ..+|++++.++ +||||++++++|++    .+.++++|||+ +|+|.+++.+...+++
T Consensus        33 ~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~  111 (270)
T d1t4ha_          33 TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKI  111 (270)
T ss_dssp             TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCH
T ss_pred             CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccH
Confidence            68899999986432        22477778877 99999999999874    45689999999 8899999988788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC--CccCCCCCCcEEEec
Q psy14425         69 AEARKLFRQIAETVRACHAQG--IVLRDLKLRKFVFCN  104 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~--i~h~~lk~~nil~~~  104 (114)
                      ..+..++.|++.|+.|||+++  ++||||||+|||++.
T Consensus       112 ~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~  149 (270)
T d1t4ha_         112 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG  149 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC
Confidence            999999999999999999998  999999999999964

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=2.7e-27  Score=149.32  Aligned_cols=106  Identities=16%  Similarity=0.249  Sum_probs=91.6

Q ss_pred             CCCcEEEEEEeccccc---------hhHHHHHhhhCCCCCcceEEEEEEcCC----EEEEEecCC-CCCHHHHHHhCCCC
Q psy14425          1 MAGIVVVLEIMSREAS---------GNLLSAHYRLDSHPHINSLHEVLLGDK----LAYLVFPPC-SGDLHSYVRQRKRL   66 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~---------~~e~~~~~~~~~h~~i~~~~~~~~~~~----~~~~v~e~~-~~~l~~~~~~~~~~   66 (114)
                      .||+.||||.++.+..         .+|+.++..+ +||||+++++++...+    .+|+||||+ +++|.+.+...+.+
T Consensus        30 ~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l  108 (277)
T d1o6ya_          30 RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM  108 (277)
T ss_dssp             TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSC
T ss_pred             CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCC
Confidence            3789999999965432         2467777776 9999999999997543    489999999 88999999887889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++..+..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       109 ~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~  149 (277)
T d1o6ya_         109 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA  149 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcccc
Confidence            99999999999999999999999999999999999976654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=5.4e-27  Score=152.91  Aligned_cols=108  Identities=19%  Similarity=0.225  Sum_probs=91.8

Q ss_pred             CCcEEEEEEeccccch---------hH---HHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCH
Q psy14425          2 AGIVVVLEIMSREASG---------NL---LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKE   68 (114)
Q Consensus         2 t~~~~avK~~~~~~~~---------~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~   68 (114)
                      ||+.||+|.+.+....         .|   +..+..+ +||||++++++|.+.+.+|+||||+ +|+|.+++.....+++
T Consensus        28 t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e  106 (364)
T d1omwa3          28 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSE  106 (364)
T ss_dssp             TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCH
T ss_pred             CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccH
Confidence            7899999998643211         12   3333444 8999999999999999999999999 8999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         69 AEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        69 ~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      ..++.++.|++.|+.|+|++|++||||||+|||++.++. +++
T Consensus       107 ~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~  149 (364)
T d1omwa3         107 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS  149 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEe
Confidence            999999999999999999999999999999999977653 343

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.5e-27  Score=145.97  Aligned_cols=108  Identities=21%  Similarity=0.233  Sum_probs=93.4

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      +++.||||.++.+..     .+|+..+.++ +||||+++++++..++.++++|||+ +|+|.+++... ..+++.....+
T Consensus        28 ~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i  106 (263)
T d1sm2a_          28 NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM  106 (263)
T ss_dssp             TTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHH
T ss_pred             CCCEEEEEEECCCcCcHHHHHHHHHHHHhc-CCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHH
Confidence            567899999975432     3478888888 9999999999999999999999999 89999988654 55889999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      +.|++.|+.|+|+++++||||||+|||++.++ .+++
T Consensus       107 ~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~  143 (263)
T d1sm2a_         107 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS  143 (263)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEEC
T ss_pred             HHHHHHHHHhhhccceeecccchhheeecCCCCeEec
Confidence            99999999999999999999999999997654 3444

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=8.7e-27  Score=151.26  Aligned_cols=108  Identities=21%  Similarity=0.277  Sum_probs=95.4

Q ss_pred             CCcEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      ||+.||||.+++..         ..+|+.++..+ +||||++++++|...+.++++||++ +|++.+.+...+.+++..+
T Consensus        65 ~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~  143 (350)
T d1rdqe_          65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA  143 (350)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHH
T ss_pred             CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHH
Confidence            78999999986432         22477777777 9999999999999999999999999 8999999988788999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         72 RKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      +.++.|++.|+.|||++|++||||||+|||++.++. +++
T Consensus       144 ~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~  183 (350)
T d1rdqe_         144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT  183 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEee
Confidence            999999999999999999999999999999976653 343

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.8e-27  Score=147.63  Aligned_cols=104  Identities=20%  Similarity=0.272  Sum_probs=89.2

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      +++.||||.++.+.        ..+|+.++.++ +||||+++++++.++ ..++||||+ +|+|.+++.....+++..+.
T Consensus        33 ~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~  110 (277)
T d1xbba_          33 VVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNII  110 (277)
T ss_dssp             SEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHHCTTCCHHHHH
T ss_pred             cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-CCCCCceEEEEeccC-CEEEEEEcCCCCcHHHHHhhccCCCHHHHH
Confidence            45789999986432        22477778877 999999999999754 568999999 89999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|+++++||||||+|||++.++.
T Consensus       111 ~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~  145 (277)
T d1xbba_         111 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY  145 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE
T ss_pred             HHHHHHHHHHhhHHhCCcccCCCcchhhcccccCc
Confidence            99999999999999999999999999999977654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-26  Score=146.33  Aligned_cols=106  Identities=23%  Similarity=0.361  Sum_probs=89.7

Q ss_pred             CCCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh--CCCCCHHH
Q psy14425          1 MAGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ--RKRLKEAE   70 (114)
Q Consensus         1 ~t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~--~~~~~~~~   70 (114)
                      .||+.||+|.++.+.        ..+|+.++.++ +||||++++++|.+++.++++||++++++.+.+..  ...+++..
T Consensus        25 ~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~  103 (298)
T d1gz8a_          25 LTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL  103 (298)
T ss_dssp             TTCCEEEEEEEC-------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHH
T ss_pred             CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHH
Confidence            378999999985432        22478888887 99999999999999999999999997766666543  35699999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       104 ~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~  140 (298)
T d1gz8a_         104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA  140 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHhhcCCEEccccCchheeecccCc
Confidence            9999999999999999999999999999999976543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-26  Score=146.18  Aligned_cols=104  Identities=23%  Similarity=0.421  Sum_probs=82.7

Q ss_pred             CCcEEEEEEeccccc--------hhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHh----CCCC
Q psy14425          2 AGIVVVLEIMSREAS--------GNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQ----RKRL   66 (114)
Q Consensus         2 t~~~~avK~~~~~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~----~~~~   66 (114)
                      ||+.||+|.+.....        .+|+.++.++ +||||+++++++.+  .+.+|++|||+ +|+|.+++..    ...+
T Consensus        28 ~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l  106 (269)
T d2java1          28 DGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL  106 (269)
T ss_dssp             TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCC
Confidence            789999999865432        2367777777 99999999999864  46689999999 8999998853    4579


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCCCcEEEecCC
Q psy14425         67 KEAEARKLFRQIAETVRACHAQG-----IVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~-----i~h~~lk~~nil~~~~~  106 (114)
                      ++..++.++.|++.|+.|+|+++     ++||||||+|||++.++
T Consensus       107 ~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~  151 (269)
T d2java1         107 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ  151 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC
Confidence            99999999999999999999976     99999999999997655

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5e-27  Score=149.45  Aligned_cols=105  Identities=16%  Similarity=0.117  Sum_probs=87.9

Q ss_pred             CCcEEEEEEecccc-----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA-----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~-----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~   69 (114)
                      ||+.||||.++...           ..+|+.++.++ +||||++++++|..++.+++||||+ ++++..+......+++.
T Consensus        22 ~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~  100 (299)
T d1ua2a_          22 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS  100 (299)
T ss_dssp             CCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSS
T ss_pred             CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHH
Confidence            68999999985432           22478888887 9999999999999999999999999 55555554445679999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       101 ~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~  138 (299)
T d1ua2a_         101 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV  138 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCc
Confidence            99999999999999999999999999999999977553

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.9e-26  Score=143.22  Aligned_cols=103  Identities=20%  Similarity=0.314  Sum_probs=88.2

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +..||||.++.....       +|+.++.++ +||||+++++++.+ +.+++||||+ +|+|.+++.. ...+++.....
T Consensus        36 ~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~  113 (285)
T d1u59a_          36 QIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE  113 (285)
T ss_dssp             CEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHH
T ss_pred             cEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHH
Confidence            457999999654322       477788888 99999999999875 4578999999 8899998754 45699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|+++++||||||+||+++.++.
T Consensus       114 i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~  147 (285)
T d1u59a_         114 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY  147 (285)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE
T ss_pred             HHHHHHHHHHHHHhCCeecCcCchhheeeccCCc
Confidence            9999999999999999999999999999977654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.6e-26  Score=142.01  Aligned_cols=106  Identities=20%  Similarity=0.307  Sum_probs=92.3

Q ss_pred             CCCcEEEEEEecccc------------chhHHHHHhhhC-CCCCcceEEEEEEcCCEEEEEecCC-C-CCHHHHHHhCCC
Q psy14425          1 MAGIVVVLEIMSREA------------SGNLLSAHYRLD-SHPHINSLHEVLLGDKLAYLVFPPC-S-GDLHSYVRQRKR   65 (114)
Q Consensus         1 ~t~~~~avK~~~~~~------------~~~e~~~~~~~~-~h~~i~~~~~~~~~~~~~~~v~e~~-~-~~l~~~~~~~~~   65 (114)
                      .||+.||||.+.++.            ...|+.++.++. .||||++++++|.+++..+++||++ + +++.+++.....
T Consensus        27 ~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~  106 (273)
T d1xwsa_          27 SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA  106 (273)
T ss_dssp             TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCS
T ss_pred             CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCC
Confidence            378999999986432            235888888773 4899999999999999999999999 4 578888877788


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++..++.++.|++.|+.|+|++|++||||||+|||++.++
T Consensus       107 l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~  147 (273)
T d1xwsa_         107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR  147 (273)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCC
Confidence            99999999999999999999999999999999999998553

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.4e-26  Score=145.31  Aligned_cols=107  Identities=24%  Similarity=0.312  Sum_probs=89.5

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC------------
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR------------   63 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~------------   63 (114)
                      ..||+|.+....       ..+|+..+.++.+||||+++++++.+.+.++++|||+ +|+|.+++...            
T Consensus        68 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~  147 (325)
T d1rjba_          68 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE  147 (325)
T ss_dssp             EEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred             eEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhc
Confidence            368999885432       2247777888879999999999999999999999999 99999999653            


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         64 -----------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        64 -----------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                                 ..+++..+..++.|++.|+.|||+++++||||||+||+++.++. +++
T Consensus       148 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~  206 (325)
T d1rjba_         148 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC  206 (325)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEEC
T ss_pred             cccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEe
Confidence                       23788999999999999999999999999999999999987653 343

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=7.7e-26  Score=144.08  Aligned_cols=105  Identities=19%  Similarity=0.249  Sum_probs=90.4

Q ss_pred             EEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~~   75 (114)
                      .||||.+.....       .+|+.++.++ +||||+++++++..++.++++|||+ +|+|.+++... +.+++..+..++
T Consensus        56 ~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~  134 (299)
T d1jpaa_          56 FVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML  134 (299)
T ss_dssp             EEEEEECCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHH
T ss_pred             EEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHH
Confidence            588998864432       2477788888 9999999999999999999999999 89999988764 569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      .|++.|+.|||+++++||||||+|||++.++. +++
T Consensus       135 ~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~  170 (299)
T d1jpaa_         135 RGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVS  170 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             HHHHHHHHHHhhCCCccCccccceEEECCCCcEEEC
Confidence            99999999999999999999999999977653 343

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=1.1e-25  Score=142.32  Aligned_cols=105  Identities=23%  Similarity=0.286  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCH-HHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDL-HSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l-~~~~~~~~~~~~~~~~   72 (114)
                      +|+.||||.++...        ..+|+.++.++ +||||++++++|..++..++++|++++++ ..+....+.+++..+.
T Consensus        25 ~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~  103 (286)
T d1ob3a_          25 YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK  103 (286)
T ss_dssp             TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHH
T ss_pred             CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhH
Confidence            68999999996542        22477788877 99999999999999999999999995544 4444556779999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|+++++||||||+|||++.++.
T Consensus       104 ~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~  138 (286)
T d1ob3a_         104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE  138 (286)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCC
Confidence            99999999999999999999999999999976543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-25  Score=140.64  Aligned_cols=106  Identities=18%  Similarity=0.174  Sum_probs=88.6

Q ss_pred             CcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHH
Q psy14425          3 GIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEAR   72 (114)
Q Consensus         3 ~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~   72 (114)
                      +..||||.++...        ..+|+.++.++ +||||+++++++. .+.++++|||+ +|+|.+++... ..+++..+.
T Consensus        30 ~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~  107 (276)
T d1uwha_          30 HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI  107 (276)
T ss_dssp             SSEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHH
T ss_pred             CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHH
Confidence            4569999986432        22477788888 9999999999864 45689999999 78999998654 569999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      .++.|++.|+.|||+++++||||||+|||++.++. +++
T Consensus       108 ~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~  146 (276)
T d1uwha_         108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG  146 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEEC
T ss_pred             HHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEc
Confidence            99999999999999999999999999999977654 344

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.7e-25  Score=139.02  Aligned_cols=105  Identities=16%  Similarity=0.268  Sum_probs=91.8

Q ss_pred             CCcEEEEEEeccccc-----hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHH
Q psy14425          2 AGIVVVLEIMSREAS-----GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKL   74 (114)
Q Consensus         2 t~~~~avK~~~~~~~-----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~   74 (114)
                      +++.||||.++.+..     .+|+..+.++ +||||+++++++.+++.++++|||+ +|++.+++.. ...+++.....+
T Consensus        27 ~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i  105 (258)
T d1k2pa_          27 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM  105 (258)
T ss_dssp             TTEEEEEEEEESSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHH
T ss_pred             CCCEEEEEEECcCcCCHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHH
Confidence            567899999976542     2478888888 9999999999999999999999999 8899988754 456899999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|||++|++||||||+||++++++.
T Consensus       106 ~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~  138 (258)
T d1k2pa_         106 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV  138 (258)
T ss_dssp             HHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCC
T ss_pred             HHHHHHHHHHHhhcCcccccccceeEEEcCCCc
Confidence            999999999999999999999999999987543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.2e-25  Score=140.29  Aligned_cols=104  Identities=15%  Similarity=0.205  Sum_probs=88.4

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC--CCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR--KRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~--~~~~~~~~~~   73 (114)
                      +++.||||.++.+.     ..+|+..+.++ +||||+++++++.. +..+++|||+ +|+|.+.+...  ..+++..+..
T Consensus        36 ~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~  113 (272)
T d1qpca_          36 GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD  113 (272)
T ss_dssp             TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHH
T ss_pred             CCCEEEEEEEccCcCCHHHHHHHHHHHHhC-CCCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHH
Confidence            56789999997543     23578888888 99999999998754 5678999999 89999877432  3589999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|+++++||||||+|||+++++.
T Consensus       114 i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~  147 (272)
T d1qpca_         114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS  147 (272)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHhCCcccCccchhheeeecccc
Confidence            9999999999999999999999999999987654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.6e-25  Score=142.26  Aligned_cols=104  Identities=17%  Similarity=0.236  Sum_probs=87.8

Q ss_pred             CCcEEEEEEecccc--chhHHHHHhhhCCCCCcceEEEEEEc------CCEEEEEecCCCCCHHHHH----HhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREA--SGNLLSAHYRLDSHPHINSLHEVLLG------DKLAYLVFPPCSGDLHSYV----RQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~--~~~e~~~~~~~~~h~~i~~~~~~~~~------~~~~~~v~e~~~~~l~~~~----~~~~~~~~~   69 (114)
                      ||+.||||.+..+.  ..+|+.++.++ +||||++++++|..      ..+++++|||+++++...+    .....+++.
T Consensus        44 ~~~~vAiK~i~~~~~~~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~  122 (350)
T d1q5ka_          44 SGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI  122 (350)
T ss_dssp             TCCEEEEEEEECCSSSCCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHH
T ss_pred             CCCEEEEEEECccchHHHHHHHHHHhc-CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHH
Confidence            78999999996553  44789988888 99999999999853      3458999999966555444    234579999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.++.|++.|+.|||++|++||||||+|||++.++
T Consensus       123 ~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~  159 (350)
T d1q5ka_         123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT  159 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC
Confidence            9999999999999999999999999999999998654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.92  E-value=5.9e-25  Score=141.30  Aligned_cols=104  Identities=21%  Similarity=0.340  Sum_probs=89.4

Q ss_pred             CCCcEEEEEEecccc---chhHHHHHhhhCCCCCcceEEEEEEc--CCEEEEEecCC-CCCHHHHHHhCCCCCHHHHHHH
Q psy14425          1 MAGIVVVLEIMSREA---SGNLLSAHYRLDSHPHINSLHEVLLG--DKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKL   74 (114)
Q Consensus         1 ~t~~~~avK~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~--~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~~~   74 (114)
                      .||+.||||+++...   ..+|+.++..+.+||||++++++|..  ...++++||++ +++|....   +.+++..++.+
T Consensus        58 ~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i  134 (328)
T d3bqca1          58 TNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFY  134 (328)
T ss_dssp             TTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHH
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh---cCCCHHHHHHH
Confidence            368999999997654   33688888888679999999999984  45699999999 77887653   56999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +.|++.|+.|||++|++||||||+|||++.++.
T Consensus       135 ~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~  167 (328)
T d3bqca1         135 MYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR  167 (328)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             HHHHHHHHHHHhhcccccccccccceEEcCCCC
Confidence            999999999999999999999999999986554

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.5e-25  Score=140.04  Aligned_cols=105  Identities=17%  Similarity=0.258  Sum_probs=90.7

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-----------
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-----------   63 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-----------   63 (114)
                      +..||||.++.+...       .|...+.++.+||||+++++++.+++..+++|||+ +|++.+++...           
T Consensus        45 ~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~  124 (299)
T d1fgka_          45 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP  124 (299)
T ss_dssp             EEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC--------
T ss_pred             ceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCcccccccc
Confidence            357999999765433       25566777779999999999999999999999999 99999999643           


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         64 -----KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        64 -----~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                           ..+++..+..++.|++.|+.|+|+++++||||||+|||++.++.
T Consensus       125 ~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~  173 (299)
T d1fgka_         125 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV  173 (299)
T ss_dssp             ----CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC
T ss_pred             ccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCC
Confidence                 24899999999999999999999999999999999999977653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.9e-25  Score=140.57  Aligned_cols=106  Identities=19%  Similarity=0.268  Sum_probs=91.2

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      +++.||||.++.....       +|..++.++.+||||+++++++.+.+..+++|||+ +|++.+++....         
T Consensus        52 ~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~  131 (311)
T d1t46a_          52 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS  131 (311)
T ss_dssp             CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC------
T ss_pred             CCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccc
Confidence            4578999999755422       36667777778999999999999999999999999 899999986432         


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 ---------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ---------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                               .+++..+..++.|++.|+.|||+++++||||||+||+++.++.
T Consensus       132 ~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~  183 (311)
T d1t46a_         132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI  183 (311)
T ss_dssp             --------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTE
T ss_pred             cccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCc
Confidence                     4788999999999999999999999999999999999977653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8e-25  Score=138.45  Aligned_cols=104  Identities=22%  Similarity=0.310  Sum_probs=91.7

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHHHH
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEAR   72 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~~~   72 (114)
                      ||+.||||+++.+.        ..+|+.++..+ +||||++++++|...+..+++++++ ++++..++...+.++...+.
T Consensus        26 ~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~  104 (292)
T d1unla_          26 THEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK  104 (292)
T ss_dssp             TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHH
T ss_pred             CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHH
Confidence            68999999986443        12577777777 9999999999999999999999999 77777777777889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      .++.|++.|+.|+|++|++||||||+|||++..+
T Consensus       105 ~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~  138 (292)
T d1unla_         105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             HHHHHHHHHHHHhhcCCEeeecccCcccccccCC
Confidence            9999999999999999999999999999997654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-24  Score=139.44  Aligned_cols=106  Identities=19%  Similarity=0.348  Sum_probs=94.6

Q ss_pred             CCcEEEEEEecccc----------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCCCCCHHH
Q psy14425          2 AGIVVVLEIMSREA----------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAE   70 (114)
Q Consensus         2 t~~~~avK~~~~~~----------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~~~~~~~   70 (114)
                      ||+.||||.+++..          ..+|+.++.++.+||||+++++++.+.+.++++||++ +++|.+.+...+.+++..
T Consensus        51 ~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~  130 (322)
T d1vzoa_          51 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE  130 (322)
T ss_dssp             TTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHH
T ss_pred             CCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHH
Confidence            68899999985432          2358999999855589999999999999999999999 899999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         71 ARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        71 ~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ...++.|++.|+.|+|+++++||||||+||+++.++.
T Consensus       131 ~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~  167 (322)
T d1vzoa_         131 VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH  167 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred             HHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCC
Confidence            9999999999999999999999999999999987654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.4e-25  Score=141.48  Aligned_cols=104  Identities=26%  Similarity=0.341  Sum_probs=89.5

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcCC------EEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGDK------LAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~~------~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      ||+.||||.+++..        ..+|+.++..+ +|||+++++++|...+      .++++||+++.++..+... +.++
T Consensus        42 ~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~  119 (346)
T d1cm8a_          42 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLG  119 (346)
T ss_dssp             TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHH-CCCC
T ss_pred             CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHh-cccc
Confidence            68999999997542        22477788877 9999999999997654      5799999998888887654 6799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       120 ~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~  159 (346)
T d1cm8a_         120 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE  159 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccc
Confidence            9999999999999999999999999999999999977654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.7e-24  Score=136.82  Aligned_cols=106  Identities=18%  Similarity=0.213  Sum_probs=90.4

Q ss_pred             cEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHHH
Q psy14425          4 IVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKL   74 (114)
Q Consensus         4 ~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~~   74 (114)
                      ..||||.+.....       .+|+.++.++ +||||+++++++...+..+++||++ ++++.+.+... ..+++.....+
T Consensus        37 ~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i  115 (283)
T d1mqba_          37 VPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM  115 (283)
T ss_dssp             EEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHH
T ss_pred             EEEEEEEECcccChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHH
Confidence            4699999865432       2467777777 9999999999999999999999999 88888877654 56999999999


Q ss_pred             HHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         75 FRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        75 ~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      +.|++.|+.|+|+++++||||||+|||++.++. +++
T Consensus       116 ~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~  152 (283)
T d1mqba_         116 LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS  152 (283)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             HHHHHHhhhhccccccccCccccceEEECCCCeEEEc
Confidence            999999999999999999999999999977653 344

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.4e-25  Score=138.30  Aligned_cols=105  Identities=22%  Similarity=0.247  Sum_probs=89.6

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhCC--CCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQRK--RLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~~--~~~~~~~~~   73 (114)
                      +|+.||||.++.+.    ..+|+..+.++ +||||+++++++.. .+.+++||||+ +|+|.+++...+  .+++.....
T Consensus        29 ~~~~vAvK~i~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~  107 (262)
T d1byga_          29 RGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK  107 (262)
T ss_dssp             TTEEEEEEECCCCC--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHH
T ss_pred             CCeEEEEEEECcHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHH
Confidence            47889999997654    33578888888 99999999998854 56789999999 899999986533  489999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|+++++||||+|+||+++.++.
T Consensus       108 i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~  141 (262)
T d1byga_         108 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV  141 (262)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC
T ss_pred             HHHHHHhhccccccCceeccccchHhheecCCCC
Confidence            9999999999999999999999999999987664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.7e-24  Score=137.03  Aligned_cols=107  Identities=18%  Similarity=0.201  Sum_probs=88.9

Q ss_pred             CCcEEEEEEecccc-----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh--CCCCCHHHHHH
Q psy14425          2 AGIVVVLEIMSREA-----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ--RKRLKEAEARK   73 (114)
Q Consensus         2 t~~~~avK~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~--~~~~~~~~~~~   73 (114)
                      +++.||||.++.+.     ..+|+..+.++ +||||+++++++. .+..+++|||+ +|++..++..  ...+++..+..
T Consensus        40 ~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~  117 (285)
T d1fmka3          40 GTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD  117 (285)
T ss_dssp             TTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHH
T ss_pred             CCCEEEEEEECcccCCHHHHHHHHHHHHhc-ccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHH
Confidence            34679999996543     23577778777 9999999999985 45678999999 8898888743  35699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC-cccc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ-RSVG  110 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~-~~~~  110 (114)
                      ++.|++.|+.|||+++++||||||+|||++.++ .+++
T Consensus       118 i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~  155 (285)
T d1fmka3         118 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA  155 (285)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             HHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEc
Confidence            999999999999999999999999999997654 3344

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.4e-24  Score=135.64  Aligned_cols=102  Identities=19%  Similarity=0.249  Sum_probs=87.8

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC-------------
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-------------   63 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~-------------   63 (114)
                      .||||.+....       ..+|+..+.++.+||||+++++++.+.+.+++||||+ +|+|.+++...             
T Consensus        39 ~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  118 (309)
T d1fvra_          39 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN  118 (309)
T ss_dssp             EEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHT
T ss_pred             EEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccc
Confidence            47788874322       2357888888768999999999999999999999999 89999998543             


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 ---KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 ---~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                         ..+++.....++.|++.|+.|+|+++++||||||+|||++.++
T Consensus       119 ~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_         119 STASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  164 (309)
T ss_dssp             TBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC
Confidence               4589999999999999999999999999999999999996654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.7e-24  Score=138.01  Aligned_cols=104  Identities=18%  Similarity=0.261  Sum_probs=88.1

Q ss_pred             CCcEEEEEEeccccc-------hhHHHHHhhhCCCCCcceEEEEEEcC-----CEEEEEecCCCCCHHHHHHhCCCCCHH
Q psy14425          2 AGIVVVLEIMSREAS-------GNLLSAHYRLDSHPHINSLHEVLLGD-----KLAYLVFPPCSGDLHSYVRQRKRLKEA   69 (114)
Q Consensus         2 t~~~~avK~~~~~~~-------~~e~~~~~~~~~h~~i~~~~~~~~~~-----~~~~~v~e~~~~~l~~~~~~~~~~~~~   69 (114)
                      ||+.||||.++....       .+|+.++.++ +|||++++++++...     ..++++++..+++|.+++.. ..+++.
T Consensus        32 ~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~-~~l~~~  109 (345)
T d1pmea_          32 NKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSND  109 (345)
T ss_dssp             TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHH-CCCCHH
T ss_pred             CCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhc-CCCCHH
Confidence            789999999965432       2478888888 999999999998754     24666666569999999865 579999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        70 ~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .+..++.|++.|+.|||++|++||||||+|||+++++.
T Consensus       110 ~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~  147 (345)
T d1pmea_         110 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD  147 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCC
Confidence            99999999999999999999999999999999977654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.9e-24  Score=135.94  Aligned_cols=105  Identities=16%  Similarity=0.223  Sum_probs=84.3

Q ss_pred             CCcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC---------
Q psy14425          2 AGIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR---------   63 (114)
Q Consensus         2 t~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~---------   63 (114)
                      +++.||+|.++.....       .|...+.++.+|+||+.+++++.. .+.++++|||+ +|+|.+++...         
T Consensus        42 ~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~  121 (299)
T d1ywna1          42 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV  121 (299)
T ss_dssp             CEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC---
T ss_pred             CCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhcccccccccc
Confidence            4578999998754332       245566777789999999988765 45789999999 89999998642         


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         64 -------KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        64 -------~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                             ..+++..+..++.|++.|+.|||+++++||||||+|||++.++
T Consensus       122 ~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~  171 (299)
T d1ywna1         122 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN  171 (299)
T ss_dssp             --------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG
T ss_pred             chhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCC
Confidence                   2378899999999999999999999999999999999997654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.8e-24  Score=133.15  Aligned_cols=103  Identities=18%  Similarity=0.316  Sum_probs=86.6

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHH
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARK   73 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~   73 (114)
                      +..||+|.++.....       +|+..+.++ +||||+++++++. .+.++++||++ +|++.+++.. ...+++.....
T Consensus        35 ~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~  112 (273)
T d1mp8a_          35 ALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL  112 (273)
T ss_dssp             CEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHH
T ss_pred             eEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHH
Confidence            456889988643322       467777777 9999999999985 56789999999 8899988754 45699999999


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|+++++||||||+||+++.++.
T Consensus       113 ~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~  146 (273)
T d1mp8a_         113 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC  146 (273)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE
T ss_pred             HHHHHHHHhhhhcccCeeccccchhheeecCCCc
Confidence            9999999999999999999999999999977553

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=8.1e-24  Score=134.70  Aligned_cols=104  Identities=24%  Similarity=0.255  Sum_probs=89.7

Q ss_pred             CCcEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhCC---------
Q psy14425          2 AGIVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRK---------   64 (114)
Q Consensus         2 t~~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~~---------   64 (114)
                      +++.||||.++.+.       ..+|+.++.++ +|||++++++++...+..+++||++ +|+|.+++....         
T Consensus        42 ~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~  120 (301)
T d1lufa_          42 PFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH  120 (301)
T ss_dssp             SEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC--------
T ss_pred             CCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-CCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccc
Confidence            45789999986543       23477788877 9999999999999999999999999 899999885422         


Q ss_pred             ---------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         65 ---------------RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        65 ---------------~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                                     .+++.....++.|++.|+.|+|+++++||||||+|||++.++
T Consensus       121 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~  177 (301)
T d1lufa_         121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM  177 (301)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             cccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCC
Confidence                           378888999999999999999999999999999999997654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=3.4e-23  Score=131.39  Aligned_cols=103  Identities=15%  Similarity=0.142  Sum_probs=90.9

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHhC-CCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-KRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~-~~~~~~~~~~~~~   76 (114)
                      ||+.||||+++...    ..+|.+.+..+.+|+|++.+++++..+...+++||+++++|.+++... ..++......++.
T Consensus        29 ~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~  108 (293)
T d1csna_          29 NNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAK  108 (293)
T ss_dssp             TTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             CCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHH
Confidence            68999999985443    345788888886669999999999999999999999999999988754 4699999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      |++.|+.|+|++|++||||||+||+++.
T Consensus       109 q~~~~l~~lH~~giiHrDiKp~Nili~~  136 (293)
T d1csna_         109 QMLARVQSIHEKSLVYRDIKPDNFLIGR  136 (293)
T ss_dssp             HHHHHHHHHHTTTEECCCCCGGGEEECC
T ss_pred             HHHHHHHHHHHCCceeccCCccceeecC
Confidence            9999999999999999999999999965

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.9e-23  Score=135.57  Aligned_cols=103  Identities=23%  Similarity=0.242  Sum_probs=86.9

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEE------cCCEEEEEecCCCCCHHHHHHhCCCCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLL------GDKLAYLVFPPCSGDLHSYVRQRKRLK   67 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~------~~~~~~~v~e~~~~~l~~~~~~~~~~~   67 (114)
                      ||+.||||++....        ..+|+.++.++ +||||++++++|.      ..+.+|++|||+.+++.+.+  ...++
T Consensus        41 t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~--~~~~~  117 (355)
T d2b1pa1          41 LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--QMELD  117 (355)
T ss_dssp             TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHH--TSCCC
T ss_pred             CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhh--hcCCC
Confidence            79999999996542        22467777777 9999999999996      34789999999966666655  35699


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         68 EAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        68 ~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      +..++.++.|++.|+.|||++|++|||+||+|||++.++.
T Consensus       118 ~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~  157 (355)
T d2b1pa1         118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT  157 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccc
Confidence            9999999999999999999999999999999999976543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-23  Score=136.05  Aligned_cols=105  Identities=23%  Similarity=0.301  Sum_probs=86.2

Q ss_pred             CCCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEcC------CEEEEEecCCCCCHHHHHHhCCCC
Q psy14425          1 MAGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLGD------KLAYLVFPPCSGDLHSYVRQRKRL   66 (114)
Q Consensus         1 ~t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~~------~~~~~v~e~~~~~l~~~~~~~~~~   66 (114)
                      .||+.||||++++..        ..+|+.++.++ +|||+++++++|...      +.++++++..+++|.+++.. +.+
T Consensus        41 ~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l  118 (348)
T d2gfsa1          41 KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKL  118 (348)
T ss_dssp             TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCC
T ss_pred             CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccc
Confidence            378999999996543        22478888888 999999999999633      23455544449999998854 579


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        67 ~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++..++.++.|++.|+.|||++|++||||||+|||++.++.
T Consensus       119 ~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~  159 (348)
T d2gfsa1         119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE  159 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc
Confidence            99999999999999999999999999999999999977654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.1e-24  Score=132.96  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=83.4

Q ss_pred             cEEEEEEecccc---------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHH
Q psy14425          4 IVVVLEIMSREA---------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEAR   72 (114)
Q Consensus         4 ~~~avK~~~~~~---------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~   72 (114)
                      ..||||.++++.         ..+|+.++.++ +||||+++++++.++ ..+++|||+ ++++.+.+.. .+.+++....
T Consensus        37 ~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~  114 (273)
T d1u46a_          37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLS  114 (273)
T ss_dssp             EEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHGGGSCHHHHH
T ss_pred             EEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeec-chheeeeeecCcchhhhhhcccCCCCHHHHH
Confidence            468999986432         22467778888 999999999999764 668999999 8898887754 4569999999


Q ss_pred             HHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         73 KLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        73 ~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++.|++.|+.|+|+++++||||||+||+++.++.
T Consensus       115 ~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~  149 (273)
T d1u46a_         115 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL  149 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE
T ss_pred             HHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc
Confidence            99999999999999999999999999999977653

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-23  Score=133.41  Aligned_cols=105  Identities=20%  Similarity=0.267  Sum_probs=83.6

Q ss_pred             CCcEEEEEEecccc--------chhHHHHHhhhCCCCCcceEEEEEEc--------CCEEEEEecCCCCCHHHHH-HhCC
Q psy14425          2 AGIVVVLEIMSREA--------SGNLLSAHYRLDSHPHINSLHEVLLG--------DKLAYLVFPPCSGDLHSYV-RQRK   64 (114)
Q Consensus         2 t~~~~avK~~~~~~--------~~~e~~~~~~~~~h~~i~~~~~~~~~--------~~~~~~v~e~~~~~l~~~~-~~~~   64 (114)
                      +|+.||||++..+.        ..+|+.++.++ +|||++++++++..        .+.++++||++++.+.... ....
T Consensus        34 ~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~  112 (318)
T d3blha1          34 TGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV  112 (318)
T ss_dssp             TCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTC
T ss_pred             CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-cCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhccc
Confidence            68999999985432        22578888888 99999999999854        3468999999955444443 4456


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      .++...++.++.|++.|+.|+|++|++||||||+|||++.++.
T Consensus       113 ~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~  155 (318)
T d3blha1         113 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV  155 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             ccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCc
Confidence            7999999999999999999999999999999999999976543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-23  Score=132.98  Aligned_cols=107  Identities=21%  Similarity=0.216  Sum_probs=86.4

Q ss_pred             CCcEEEEEEeccccchh---H--HHHHhhhCCCCCcceEEEEEEcCC----EEEEEecCC-CCCHHHHHHhCCCCCHHHH
Q psy14425          2 AGIVVVLEIMSREASGN---L--LSAHYRLDSHPHINSLHEVLLGDK----LAYLVFPPC-SGDLHSYVRQRKRLKEAEA   71 (114)
Q Consensus         2 t~~~~avK~~~~~~~~~---e--~~~~~~~~~h~~i~~~~~~~~~~~----~~~~v~e~~-~~~l~~~~~~~~~~~~~~~   71 (114)
                      +|+.||||.++.+....   |  +..+.++ +||||+++++++.+.+    .++++|||+ +|+|.+++.+ ..+++...
T Consensus        25 ~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~l~~~~~  102 (303)
T d1vjya_          25 RGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGM  102 (303)
T ss_dssp             TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHH
T ss_pred             CCEEEEEEEECccchhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc-CCCCHHHH
Confidence            57899999996554332   2  3333344 8999999999997543    689999999 8999999976 46889999


Q ss_pred             HHHHHHHHHHHHHHHH--------CCCccCCCCCCcEEEecCCc-ccc
Q psy14425         72 RKLFRQIAETVRACHA--------QGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        72 ~~~~~~~~~~l~~lh~--------~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      ..++.|++.|+.|+|+        +|++||||||+|||++.++. +++
T Consensus       103 ~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~  150 (303)
T d1vjya_         103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEE
Confidence            9999999999999996        58999999999999976643 343

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.6e-23  Score=130.52  Aligned_cols=103  Identities=20%  Similarity=0.239  Sum_probs=86.7

Q ss_pred             cEEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEc-CCEEEEEecCC-CCCHHHHHHhC-CCCCHHHHHH
Q psy14425          4 IVVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLG-DKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARK   73 (114)
Q Consensus         4 ~~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~-~~~~~~v~e~~-~~~l~~~~~~~-~~~~~~~~~~   73 (114)
                      ..||||.++...       ..+|++.+.++ +||||+++++++.. ++..+++|||+ ++++.+++... ..++......
T Consensus        56 ~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~  134 (311)
T d1r0pa_          56 IHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG  134 (311)
T ss_dssp             EEEEEEEECCCCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHH
T ss_pred             EEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHH
Confidence            368999986432       22477788887 99999999999764 57899999999 89999988654 4577888899


Q ss_pred             HHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc
Q psy14425         74 LFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        74 ~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~  107 (114)
                      ++.|++.|+.|+|+++++||||||+|||+++++.
T Consensus       135 i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~  168 (311)
T d1r0pa_         135 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT  168 (311)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC
T ss_pred             HHHHHHHhhhhhcccCcccCCccHHhEeECCCCC
Confidence            9999999999999999999999999999977553

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.3e-22  Score=129.95  Aligned_cols=104  Identities=19%  Similarity=0.231  Sum_probs=84.6

Q ss_pred             EEEEEEecccc-------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHh-CCCCCHHHHHHHH
Q psy14425          5 VVVLEIMSREA-------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQ-RKRLKEAEARKLF   75 (114)
Q Consensus         5 ~~avK~~~~~~-------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~-~~~~~~~~~~~~~   75 (114)
                      +||+|.++...       ..+|+.++.++ +||||+++++++.+++. ++++|++ +++|.+.+.. ...+++..+..++
T Consensus        40 ~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~-~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~  117 (317)
T d1xkka_          40 PVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  117 (317)
T ss_dssp             EEEEEEECC----CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESSSE-EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHH
T ss_pred             EEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCe-eEEEEeccCCcccccccccccCCCHHHHHHHH
Confidence            68899875432       22478888887 99999999999987654 5666777 8899888765 4569999999999


Q ss_pred             HHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         76 RQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        76 ~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      .|++.|+.|||+++++||||||+||+++.++. +++
T Consensus       118 ~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~  153 (317)
T d1xkka_         118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT  153 (317)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEEC
T ss_pred             HHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEee
Confidence            99999999999999999999999999977653 344

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.3e-23  Score=131.74  Aligned_cols=107  Identities=21%  Similarity=0.260  Sum_probs=90.5

Q ss_pred             CcEEEEEEeccccch-------hHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHHHHHhC----------C
Q psy14425          3 GIVVVLEIMSREASG-------NLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR----------K   64 (114)
Q Consensus         3 ~~~~avK~~~~~~~~-------~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~~~~~~----------~   64 (114)
                      ++.||||.++.....       +|+.++.++ +||||+++++++...+..+++||++ +|+|.+++...          .
T Consensus        50 ~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~  128 (308)
T d1p4oa_          50 ETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA  128 (308)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCC
T ss_pred             CcEEEEEEECcccChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccC
Confidence            468999999754322       467777777 9999999999999999999999999 89999987431          2


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCc-ccc
Q psy14425         65 RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQR-SVG  110 (114)
Q Consensus        65 ~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~-~~~  110 (114)
                      .++......++.|++.|+.|||+++++||||||+|||++.++. +++
T Consensus       129 ~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_         129 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEe
Confidence            3688899999999999999999999999999999999977653 344

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.1e-23  Score=129.77  Aligned_cols=104  Identities=20%  Similarity=0.304  Sum_probs=81.2

Q ss_pred             CcEEEEEEecccc--------chhHHHHHhhh--CCCCCcceEEEEEEc-----CCEEEEEecCCCCCHHHHH-H-hCCC
Q psy14425          3 GIVVVLEIMSREA--------SGNLLSAHYRL--DSHPHINSLHEVLLG-----DKLAYLVFPPCSGDLHSYV-R-QRKR   65 (114)
Q Consensus         3 ~~~~avK~~~~~~--------~~~e~~~~~~~--~~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~l~~~~-~-~~~~   65 (114)
                      ++.||||.+..+.        ..+|+..+..+  .+||||++++++|..     ...++++||++.++..... . ....
T Consensus        33 ~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  112 (305)
T d1blxa_          33 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG  112 (305)
T ss_dssp             TEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTC
T ss_pred             CEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCC
Confidence            5679999985432        22466655543  389999999999863     3578999999954444333 2 3356


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCC
Q psy14425         66 LKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        66 ~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~  106 (114)
                      +++..++.++.|++.|+.|||+++++||||||+|||++..+
T Consensus       113 ~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~  153 (305)
T d1blxa_         113 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG  153 (305)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCC
Confidence            99999999999999999999999999999999999997754

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=4e-22  Score=126.56  Aligned_cols=103  Identities=13%  Similarity=0.103  Sum_probs=85.4

Q ss_pred             CCcEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCCCHHHHHHh-CCCCCHHHHHHHHH
Q psy14425          2 AGIVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQ-RKRLKEAEARKLFR   76 (114)
Q Consensus         2 t~~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~-~~~~~~~~~~~~~~   76 (114)
                      ||+.||||.+....    ...|..++..+..|++++.+.+++..++..+++||++++++.+.+.. ...++...+..++.
T Consensus        31 ~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~  110 (299)
T d1ckia_          31 AGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD  110 (299)
T ss_dssp             TTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             CCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHH
Confidence            68899999886442    33577777777444556667777888999999999998888777654 45799999999999


Q ss_pred             HHHHHHHHHHHCCCccCCCCCCcEEEec
Q psy14425         77 QIAETVRACHAQGIVLRDLKLRKFVFCN  104 (114)
Q Consensus        77 ~~~~~l~~lh~~~i~h~~lk~~nil~~~  104 (114)
                      |++.|+.|+|++|++||||||+|||++.
T Consensus       111 qi~~~l~~lH~~~iiHrDiKp~NIl~~~  138 (299)
T d1ckia_         111 QMISRIEYIHSKNFIHRDVKPDNFLMGL  138 (299)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEECC
T ss_pred             HHHHHHHHHHHCCeeeccCCHhhccccc
Confidence            9999999999999999999999999854

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.73  E-value=7.2e-18  Score=100.69  Aligned_cols=97  Identities=13%  Similarity=0.061  Sum_probs=70.4

Q ss_pred             CCcEEEEEEeccccc------------------------hhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCCCC-CH
Q psy14425          2 AGIVVVLEIMSREAS------------------------GNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DL   56 (114)
Q Consensus         2 t~~~~avK~~~~~~~------------------------~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~-~l   56 (114)
                      +|+.||||.+.....                        ..|...+.++ .|++++..+++..    .+++||++.+ .+
T Consensus        23 ~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~~~~~~----~~lvme~~~~~~~   97 (191)
T d1zara2          23 KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKVYAWEG----NAVLMELIDAKEL   97 (191)
T ss_dssp             TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCEEEEET----TEEEEECCCCEEG
T ss_pred             CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceEEEecC----CEEEEEeeccccc
Confidence            588999998643210                        0134455556 8888888776532    2689999943 33


Q ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCcEEEecCCcccc
Q psy14425         57 HSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSVG  110 (114)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~i~h~~lk~~nil~~~~~~~~~  110 (114)
                      .+       ++......++.|++.++.|+|.+|++|||+||+|||+++++.++.
T Consensus        98 ~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~~~li  144 (191)
T d1zara2          98 YR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWII  144 (191)
T ss_dssp             GG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTEEEEC
T ss_pred             cc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCCEEEE
Confidence            22       444556678999999999999999999999999999998776654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=2.9e-17  Score=106.12  Aligned_cols=106  Identities=13%  Similarity=0.159  Sum_probs=79.1

Q ss_pred             CCCcEEEEEEeccccc-----hhHHHHHhhh----------CCCCCcceEEEEEEc--CCEEEEEecCC--CCCHHHHHH
Q psy14425          1 MAGIVVVLEIMSREAS-----GNLLSAHYRL----------DSHPHINSLHEVLLG--DKLAYLVFPPC--SGDLHSYVR   61 (114)
Q Consensus         1 ~t~~~~avK~~~~~~~-----~~e~~~~~~~----------~~h~~i~~~~~~~~~--~~~~~~v~e~~--~~~l~~~~~   61 (114)
                      .||+.||||+++.+..     .+|+.++..+          ..|+|++++++++..  ....+.+++++  .++......
T Consensus        36 ~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (362)
T d1q8ya_          36 VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK  115 (362)
T ss_dssp             TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHH
T ss_pred             CCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccc
Confidence            3789999999976532     3455555443          257899999988863  45566666665  444444433


Q ss_pred             --hCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCCCcEEEecCC
Q psy14425         62 --QRKRLKEAEARKLFRQIAETVRACHA-QGIVLRDLKLRKFVFCNAQ  106 (114)
Q Consensus        62 --~~~~~~~~~~~~~~~~~~~~l~~lh~-~~i~h~~lk~~nil~~~~~  106 (114)
                        ....++...++.++.|++.|+.|+|+ .|++||||||+|||++..+
T Consensus       116 ~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_         116 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             cccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccC
Confidence              34568999999999999999999998 8999999999999996543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.83  E-value=0.00019  Score=43.18  Aligned_cols=56  Identities=7%  Similarity=-0.028  Sum_probs=38.8

Q ss_pred             CcEEEEEEecccc------chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC-CCCHHH
Q psy14425          3 GIVVVLEIMSREA------SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHS   58 (114)
Q Consensus         3 ~~~~avK~~~~~~------~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~-~~~l~~   58 (114)
                      ++.+.+|......      ...|...+..+..+-.+.+++.+...++..+++|+++ +.++..
T Consensus        37 ~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~   99 (263)
T d1j7la_          37 NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE   99 (263)
T ss_dssp             SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred             CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccc
Confidence            5677888875432      3346666655545555778888888888999999999 555543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.83  E-value=0.0033  Score=37.30  Aligned_cols=55  Identities=13%  Similarity=0.078  Sum_probs=36.1

Q ss_pred             CCcEEEEEEecccc---chhHHHHHhhhCCC-CCcceEEEEEEcCCEEEEEecCC-CCCH
Q psy14425          2 AGIVVVLEIMSREA---SGNLLSAHYRLDSH-PHINSLHEVLLGDKLAYLVFPPC-SGDL   56 (114)
Q Consensus         2 t~~~~avK~~~~~~---~~~e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~v~e~~-~~~l   56 (114)
                      +|..+++|......   ...|...+..+..+ ..+.+++.+..+++..+++|+++ +.++
T Consensus        34 ~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          34 GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             TSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             CCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            35567888775443   33466555544232 34677888888888899999999 4444

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.32  E-value=0.0062  Score=38.89  Aligned_cols=21  Identities=14%  Similarity=0.208  Sum_probs=17.5

Q ss_pred             CCccCCCCCCcEEEecCCccc
Q psy14425         89 GIVLRDLKLRKFVFCNAQRSV  109 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~~~  109 (114)
                      .++|+|+.|.|||+++++..+
T Consensus       224 ~LiHGDl~~gNIlv~~~~~~v  244 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHETKV  244 (392)
T ss_dssp             EEECSCCCGGGEEECSSCEEE
T ss_pred             ceeccCCcCCceeEcCCceEE
Confidence            489999999999998876544

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.86  E-value=0.92  Score=28.40  Aligned_cols=45  Identities=11%  Similarity=-0.123  Sum_probs=26.4

Q ss_pred             cEEEEEEecccc----chhHHHHHhhhCCCCCcceEEEEEEcCCEEEEEecCC
Q psy14425          4 IVVVLEIMSREA----SGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPC   52 (114)
Q Consensus         4 ~~~avK~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~v~e~~   52 (114)
                      +.+.++++....    ...|..++..+.++.-.++++.+|.+    .+++||+
T Consensus        75 ~~vllRi~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi  123 (395)
T d1nw1a_          75 NKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI  123 (395)
T ss_dssp             SEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred             CcEEEEecCCcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEe
Confidence            456666654221    22456566655455445677887754    4788988

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.18  E-value=0.068  Score=32.54  Aligned_cols=19  Identities=21%  Similarity=0.350  Sum_probs=16.5

Q ss_pred             CCccCCCCCCcEEEecCCc
Q psy14425         89 GIVLRDLKLRKFVFCNAQR  107 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~~~  107 (114)
                      |++|+|+.++|++++++..
T Consensus       184 giIHgDl~~dNvl~~~~~v  202 (316)
T d2ppqa1         184 GVIHADLFQDNVFFLGDEL  202 (316)
T ss_dssp             EEECSCCCGGGEEEETTEE
T ss_pred             ccccCCcchhhhhcccccc
Confidence            6899999999999987653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=81.87  E-value=0.67  Score=28.27  Aligned_cols=17  Identities=6%  Similarity=0.030  Sum_probs=14.7

Q ss_pred             CCccCCCCCCcEEEecC
Q psy14425         89 GIVLRDLKLRKFVFCNA  105 (114)
Q Consensus        89 ~i~h~~lk~~nil~~~~  105 (114)
                      +++|+|+.|.|+|++++
T Consensus       193 ~liHgDlh~~NvL~~~~  209 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG  209 (325)
T ss_dssp             EECCSSCSGGGEEESSS
T ss_pred             eeecCCCCcccEEEeCC
Confidence            57999999999999654