Diaphorina citri psyllid: psy14441


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MSSRALTSLASCARKYLPCDILLKIQSVPTIPQVEQNITYRIQNITQHFNSHSFLFRKQRNVYLHCLLVMLNFMSFNLCQHSLKAHSHGHASIHDMHMPVACHFVLSSLLKALLPVIGSQMVQQVRRSHAYSKKPPVTIDDLPVPQGSWKAHYDKQNTKYNIQLLVGTVSLAATIGYLAVSDVFIWNFFPPTLPKNEVLSFPAKDLSMLNSVDSDHSQVMNSFSNSMEVDQNSSQSSTQSPAAQVMQKTNMPSSTPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKKY
ccHHHHHHHHHHHHccccccEEEccccccccccccccHHHEEHHHHHHccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcc
********LASCARKYLPCDILLKIQSVPTIPQVEQNITYRIQNITQHFNSHSFLFRKQRNVYLHCLLVMLNFMSFNLCQHSLKAHSHGHASIHDMHMPVACHFVLSSLLKALLPVIG******************VTIDDLPVPQGSWKAHYDKQNTKYNIQLLVGTVSLAATIGYLAVSDVFIWNFFPPTLPKNEVLSF****************************************************************LDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPKDLQFVLAKDWNISIPGYGTDEL*******************RKHL***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSSRALTSLASCARKYLPCDILLKIQSVPTIPQVEQNITYRIQNITQHFNSHSFLFRKQRNVYLHCLLVMLNFMSFNLCQHSLKAHSHGHASIHDMHMPVACHFVLSSLLKALLPVIGSQMVQQVRRSHAYSKKPPVTIDDLPVPQGSWKAHYDKQNTKYNIQLLVGTVSLAATIGYLAVSDVFIWNFFPPTLPKNEVLSFPAKDLSMLNSVDSDHSQVMNSFSNSMEVDQNSSQSSTQSPAAQVMQKTNMPSSTPNDQILGKDKLDELMRQVDSTLQIDEEVYDTFSEIANDFVDNIVHRACQLAKHRGSSTLDPKDLQFVLAKDWNISIPGYGTDELKPYKRPMATEAHKQRLALIRKHLKKY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transcription initiation factor TFIID subunit 12 TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TAFs components-TIIFD are essential for mediating regulation of RNA polymerase transcription.confidentQ16514
Transcription initiation factor TFIID subunit 12 TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TAFs components-TIIFD are essential for mediating regulation of RNA polymerase transcription.confidentQ8VE65
Transcription initiation factor TFIID subunit 12 TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TAFs components-TIIFD are essential for mediating regulation of RNA polymerase transcription.confidentQ3T174

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0004402 [MF]histone acetyltransferase activityprobableGO:0008080, GO:0016740, GO:0003824, GO:0016407, GO:0016746, GO:0016747, GO:0016410, GO:0003674
GO:0043966 [BP]histone H3 acetylationprobableGO:0043543, GO:0006473, GO:0006475, GO:0016043, GO:0044699, GO:0044267, GO:0044260, GO:0006325, GO:0071840, GO:0018193, GO:0071704, GO:0016570, GO:0016573, GO:0018393, GO:0018394, GO:0009987, GO:0006464, GO:0043412, GO:0036211, GO:0044763, GO:0008152, GO:0006996, GO:0044238, GO:0051276, GO:0018205, GO:0044237, GO:0043170, GO:0019538, GO:0008150, GO:0016568, GO:0016569
GO:0051091 [BP]positive regulation of sequence-specific DNA binding transcription factor activityprobableGO:0009889, GO:0051090, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:0044093, GO:2001141, GO:0008150, GO:0065009, GO:0010468
GO:0005669 [CC]transcription factor TFIID complexprobableGO:0030880, GO:0000428, GO:0031974, GO:0043229, GO:0016591, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0055029, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0005667, GO:0044424, GO:0044422
GO:0003677 [MF]DNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0006366 [BP]transcription from RNA polymerase II promoterprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438
GO:0000125 [CC]PCAF complexprobableGO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043231, GO:0043234, GO:0032991, GO:0000123, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0070461, GO:0044428, GO:0044424, GO:0044422
GO:0006352 [BP]DNA-dependent transcription, initiationprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438
GO:0033276 [CC]transcription factor TFTC complexprobableGO:0030880, GO:0044464, GO:0031974, GO:0043229, GO:0016591, GO:0043227, GO:0043226, GO:0005575, GO:0000123, GO:0005634, GO:0005654, GO:0044451, GO:0055029, GO:0043231, GO:0043234, GO:0032991, GO:0031981, GO:0043233, GO:0000428, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0070461, GO:0044428, GO:0005667, GO:0044424, GO:0044422
GO:0003713 [MF]transcription coactivator activityprobableGO:0003674, GO:0003712, GO:0000989, GO:0000988
GO:0008134 [MF]transcription factor bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1H3O, chain B
Confidence level:very confident
Coverage over the Query: 260-331
View the alignment between query and template
View the model in PyMOL
Template: 1V54, chain K
Confidence level:probable
Coverage over the Query: 161-191
View the alignment between query and template
View the model in PyMOL
Template: 2Y69, chain K
Confidence level:probable
Coverage over the Query: 146-191
View the alignment between query and template
View the model in PyMOL