Diaphorina citri psyllid: psy14486

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470--
MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI
cccEEEEEccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccccccccEEEEccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccEEEccccccEEEEEc
*STLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYT*****VNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI
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MSTLRIYNSFSRKKQIFYPITPGKVSLYVCGITAYDYCHLGHARLMIVFDIVQRWLRINNYDVTYVRNITDIDDKIIACAKKNNESIKTLTSRFIKAAQEDSLLLHIQPPDYQPCATNYIPQILKMIEKLIFNGLAYQNNNGKINGDVNYSVRNFLNYGKLSGRLISSNFNKINEKNNFKKDPLDFALWKVSKNNDPYEIRWNSKWGAGRPGWHIECSAMSCYLLGSHFDIHGGGQDLKFPHHENEIAQSEGAYKHKFVNYWMHSGFVKINNKKMSKSFGNFCTIRDLLKKYNPEVIRFFILRSHYRSTINYSEIYLNYAKKSLIRLYLAIKDIPKINYKKIIDLNEPHAKRFIIAMNDDFNTPVAISILFDLANIINKNKSIKMAKQLRGLGNWLGLLEYSSDEFLKNNIYTERKKNVNYSENDIKLKIYFRSEARKRKNFLEADKIRQELVNNGIILEDMPNGKTEWRRI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cysteine--tRNA ligase very confidentA3NWX8
Cysteine--tRNA ligase very confidentQ0AJJ4
Cysteine--tRNA ligase 2 very confidentQ39EY8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0004817 [MF]cysteine-tRNA ligase activityprobableGO:0004812, GO:0003824, GO:0003674, GO:0016874, GO:0016875, GO:0016876
GO:0009570 [CC]chloroplast stromaprobableGO:0005737, GO:0005575, GO:0009536, GO:0043231, GO:0009532, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044435, GO:0044434, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0009507
GO:0006423 [BP]cysteinyl-tRNA aminoacylationprobableGO:0006139, GO:0019752, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0044281, GO:0034645, GO:0034660, GO:1901360, GO:0044267, GO:0044710, GO:0044260, GO:0006520, GO:0071704, GO:0010467, GO:1901576, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0043436, GO:0046483, GO:0016070, GO:0044238, GO:1901564, GO:0006082, GO:0019538, GO:0044237, GO:0043170, GO:0006399, GO:0043038, GO:0043039, GO:0006418, GO:0006412
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0040007 [BP]growthprobableGO:0008150
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.1.-.-1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.probable
6.1.1.-Ligases forming aminoacyl-tRNA and related compounds.probable
6.1.1.16Cysteine--tRNA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1LI5, chain A
Confidence level:very confident
Coverage over the Query: 4-164,180-407
View the alignment between query and template
View the model in PyMOL