Diaphorina citri psyllid: psy14516

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MVSNTPPLQALVNEEMFLVTPLADCPHTPLVAPVPQSGVDVKAPCVDCASVAENWVCLICYQVRCGRYIEEHSNEF
cccccccccccccccEEEEcccccccccccccccccccccccccccccccccccEEEcEEcEEEEccccccccccc
******P***LVNEEMFLVTPLADCPHTPLVAPVPQSGVDVKAPCVDCASVAENWVCLICYQVRCGRYIEEH****
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MVSNTPPLQALVNEEMFLVTPLADCPHTPLVAPVPQSGVDVKAPCVDCASVAENWVCLICYQVRCGRYIEEHSNEF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Histone deacetylase 6 In addition to its protein deacetylase activity, plays a key role in the degradation of misfolded proteins: when misfolded proteins are too abundant to be degraded by the chaperone refolding system and the ubiquitin-proteasome, mediates the transport of misfolded proteins to a cytoplasmic juxtanuclear structure called aggresome. Probably acts as an adapter that recognizes polyubiquitinated misfolded proteins and target them to the aggresome, facilitating their clearance by autophagy.confidentQ9UBN7
Histone deacetylase 6 In addition to its protein deacetylase activity, plays a key role in the degradation of misfolded proteins: when misfolded proteins are too abundant to be degraded by the chaperone refolding system and the ubiquitin-proteasome, mediates the transport of misfolded proteins to a cytoplasmic juxtanuclear structure called aggresome. Probably acts as an adapter that recognizes polyubiquitinated misfolded proteins and target them to the aggresome, facilitating their clearance by autophagy.confidentQ9Z2V5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0010634 [BP]positive regulation of epithelial cell migrationprobableGO:0051272, GO:0030335, GO:0030334, GO:2000147, GO:0040017, GO:0050789, GO:0008150, GO:0040012, GO:0051270, GO:2000145, GO:0051239, GO:0048518, GO:0065007, GO:0032879, GO:0050794, GO:0010632, GO:0048522
GO:0051788 [BP]response to misfolded proteinprobableGO:0050896, GO:0006950, GO:0035966, GO:0008150, GO:0042221, GO:0010033
GO:0032418 [BP]lysosome localizationprobableGO:0009987, GO:0044763, GO:0051640, GO:0008150, GO:0051179, GO:0044699, GO:0051641
GO:0051879 [MF]Hsp90 protein bindingprobableGO:0031072, GO:0003674, GO:0005488, GO:0005515
GO:0031252 [CC]cell leading edgeprobableGO:0005575, GO:0044464, GO:0005623
GO:0048156 [MF]tau protein bindingprobableGO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0009636 [BP]response to toxic substanceprobableGO:0042221, GO:0050896, GO:0008150
GO:0043065 [BP]positive regulation of apoptotic processprobableGO:0050794, GO:0050789, GO:0048518, GO:0043067, GO:0065007, GO:0010942, GO:0008150, GO:0010941, GO:0042981, GO:0043068, GO:0048522
GO:0031593 [MF]polyubiquitin bindingprobableGO:0003674, GO:0043130, GO:0032182, GO:0005488, GO:0005515
GO:0070845 [BP]polyubiquitinated misfolded protein transportprobableGO:0070844, GO:0033036, GO:0034613, GO:0070843, GO:0046907, GO:0070727, GO:0006886, GO:0006810, GO:0045184, GO:0044765, GO:0008104, GO:0008150, GO:0071702, GO:0015031, GO:0044763, GO:0009987, GO:0051234, GO:0051649, GO:0051179, GO:0044699, GO:0051641
GO:0070840 [MF]dynein complex bindingprobableGO:0032403, GO:0003674, GO:0005488, GO:0005515
GO:0004407 [MF]histone deacetylase activityprobableGO:0016787, GO:0019213, GO:0016810, GO:0016811, GO:0003824, GO:0003674, GO:0033558
GO:0070848 [BP]response to growth factor stimulusprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0030286 [CC]dynein complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0043226, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0005622, GO:0005875, GO:0044422
GO:0006515 [BP]misfolded or incompletely synthesized protein catabolic processprobableGO:0051603, GO:1901575, GO:0044265, GO:0044260, GO:0044267, GO:0019538, GO:0009056, GO:0009987, GO:0044237, GO:0043170, GO:0044248, GO:0071704, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0006508, GO:0044238, GO:0009057
GO:0043014 [MF]alpha-tubulin bindingprobableGO:0015631, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0000209 [BP]protein polyubiquitinationprobableGO:0071704, GO:0044267, GO:0044238, GO:0044260, GO:0032446, GO:0019538, GO:0009987, GO:0070647, GO:0006464, GO:0043170, GO:0016567, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0070301 [BP]cellular response to hydrogen peroxideprobableGO:1901700, GO:1901701, GO:0051716, GO:0070887, GO:0042542, GO:0050896, GO:0009987, GO:0034614, GO:0000302, GO:0008150, GO:0006950, GO:0044763, GO:0033554, GO:0042221, GO:0034599, GO:0010035, GO:0006979, GO:0044699
GO:0000118 [CC]histone deacetylase complexprobableGO:0043234, GO:0044446, GO:0032991, GO:0005575, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0090035 [BP]positive regulation of chaperone-mediated protein complex assemblyprobableGO:0051130, GO:0090034, GO:0031334, GO:0051128, GO:0044087, GO:0065007, GO:0048518, GO:0008150, GO:0043254, GO:0050794, GO:0050789, GO:0048522
GO:0016236 [BP]macroautophagyprobableGO:0009991, GO:0008152, GO:0044248, GO:0042594, GO:0044699, GO:0051716, GO:0071496, GO:0006914, GO:0009987, GO:0006950, GO:0008150, GO:0009267, GO:0007154, GO:0009056, GO:0031668, GO:0031669, GO:0009605, GO:0050896, GO:0031667, GO:0044237, GO:0033554, GO:0044763
GO:0016235 [CC]aggresomeprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0016234, GO:0044424
GO:0009967 [BP]positive regulation of signal transductionprobableGO:0009966, GO:0048584, GO:0048583, GO:0050794, GO:0023056, GO:0065007, GO:0023051, GO:0048518, GO:0008150, GO:0010647, GO:0010646, GO:0050789, GO:0048522
GO:0042826 [MF]histone deacetylase bindingprobableGO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0034983 [BP]peptidyl-lysine deacetylationprobableGO:0071704, GO:0044267, GO:0035601, GO:0044260, GO:0044238, GO:0018205, GO:0044237, GO:0009987, GO:0006464, GO:0006476, GO:0019538, GO:0043412, GO:0036211, GO:0008150, GO:0018193, GO:0008152, GO:0043170
GO:0016575 [BP]histone deacetylationprobableGO:0006476, GO:0044699, GO:0044267, GO:0044260, GO:0006325, GO:0071840, GO:0016043, GO:0071704, GO:0016570, GO:0035601, GO:0009987, GO:0006464, GO:0043412, GO:0036211, GO:0044763, GO:0008152, GO:0006996, GO:0044238, GO:0051276, GO:0019538, GO:0044237, GO:0043170, GO:0008150, GO:0016568, GO:0016569
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0035967 [BP]cellular response to topologically incorrect proteinprobableGO:0051716, GO:0070887, GO:0050896, GO:0009987, GO:0071310, GO:0008150, GO:0006950, GO:0035966, GO:0044763, GO:0033554, GO:0042221, GO:0010033, GO:0044699
GO:0007026 [BP]negative regulation of microtubule depolymerizationprobableGO:0031110, GO:0031111, GO:0031114, GO:0033043, GO:1901879, GO:0051129, GO:0051128, GO:0043244, GO:0032886, GO:0050789, GO:0044699, GO:0043242, GO:0051494, GO:0051493, GO:0065007, GO:0048519, GO:0009987, GO:1901880, GO:0044763, GO:0050794, GO:0010639, GO:0008150, GO:0070507, GO:0048523
GO:0010870 [BP]positive regulation of receptor biosynthetic processprobableGO:0009893, GO:0019222, GO:0009891, GO:0060255, GO:0009889, GO:0031325, GO:0031323, GO:0010604, GO:0050794, GO:0010869, GO:0010557, GO:0010556, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0048487 [MF]beta-tubulin bindingprobableGO:0015631, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0008013 [MF]beta-catenin bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0005901 [CC]caveolaprobableGO:0045121, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0045861 [BP]negative regulation of proteolysisprobableGO:0032269, GO:0032268, GO:0010605, GO:0080090, GO:0019222, GO:0060255, GO:0031323, GO:0031324, GO:0051246, GO:0051248, GO:0050794, GO:0008150, GO:0065007, GO:0030162, GO:0048519, GO:0009892, GO:0050789, GO:0048523
GO:0010469 [BP]regulation of receptor activityprobableGO:0009966, GO:0048583, GO:0050794, GO:0065007, GO:0023051, GO:0008150, GO:0065009, GO:0010646, GO:0050789
GO:0005881 [CC]cytoplasmic microtubuleprobableGO:0005737, GO:0043234, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0005856, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044430, GO:0044424, GO:0043228, GO:0005874, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3C5K, chain A
Confidence level:very confident
Coverage over the Query: 20-76
View the alignment between query and template
View the model in PyMOL