Diaphorina citri psyllid: psy14560

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----

MQQCMIVINPSPKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLEVVTYRYSGHSMSDPGTSFRDPITSFKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQTLKSLLKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQVSSFLQEGTM

cccccccccccccccccccCCcccccHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHccccHHHHccccccccEEccccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHcccccccHHHHcccccccccccccccccccccccccccccccccccccCEEEEEcccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHccccc

*QQCMIVINPSPKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLEVVTYRYSGHSMSDPGTSFRDPITSFKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQTLKSLLKSISGRSYASEATFET***************VTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQVSSFLQEGTM

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Pyruvate dehydrogenase E1 component subunit alpha	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).	confident	Q9R9N5
Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).	confident	Q6Z5N4
Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial	The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).	confident	P52899

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0006086 [BP]	acetyl-CoA biosynthetic process from pyruvate	probable	GO:0006637, GO:0006732, GO:0019752, GO:0044249, GO:0009108, GO:0044281, GO:0006090, GO:1901576, GO:0044710, GO:0051186, GO:0051188, GO:0071704, GO:0035383, GO:0035384, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0006084, GO:0006085, GO:0006082, GO:0044237, GO:0071616, GO:0006793
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0008270 [MF]	zinc ion binding	probable	GO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0050897 [MF]	cobalt ion binding	probable	GO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0005634 [CC]	nucleus	probable	GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0045335 [CC]	phagocytic vesicle	probable	GO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0006099 [BP]	tricarboxylic acid cycle	probable	GO:0044238, GO:0044710, GO:0015980, GO:0009987, GO:0044237, GO:0009060, GO:0008150, GO:0008152, GO:0045333, GO:0006091, GO:0055114
GO:0005967 [CC]	mitochondrial pyruvate dehydrogenase complex	probable	GO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0005575, GO:0005739, GO:0005759, GO:0043234, GO:0045254, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0042645 [CC]	mitochondrial nucleoid	probable	GO:0031974, GO:0043229, GO:0043228, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0009295, GO:0005759, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0004739 [MF]	pyruvate dehydrogenase (acetyl-transferring) activity	probable	GO:0004738, GO:0016624, GO:0003824, GO:0016903, GO:0003674, GO:0016491

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2OZL, chain A
Confidence level:very confident
Coverage over the Query: 13-191
View the alignment between query and template
View the model in PyMOL

Template: 2OZL, chain A
Confidence level:very confident
Coverage over the Query: 277-350
View the alignment between query and template
View the model in PyMOL

Template: 2BFD, chain A
Confidence level:very confident
Coverage over the Query: 155-229,242-275
View the alignment between query and template
View the model in PyMOL